Rmu_sc0000091.1_g000008

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000091.1
OG0000400
Physical Location & Seq
Forward (+)
22270 .. 25134
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000091.1_g000008.1.cds

Sequence Viewer

Length: 2865 bp
atggcagacgtagttttatcaccagctttgcaagtgatctttgacagagtagcatccccagtcctacaaaagcttgcggatatctgggacatgaaggacaacctccagagcctacaacatgccttggtcatggttcaagctattcttgaagatgcagaggagcaacaactgaccaacaaagccgtccggctttggctgtcgaagctcaagaacgcagctcatgatgctgatgaccttctggacttcgttgctgctaaagacatcattatgggccctggaaaattatgtaagtggacctatccaattccaaaatacatagatgctgataaagtcagaaagatgctttcggctttagaaatgacagtaaacgagggtctattgaagtttaattttcgagagcctggttcagtagataggcaatctgataaaagggagactagctcttttgtttctgagtcagaaatatatggaagagctgatgacaaagagaagttagtgaaactgttactatcttctgagtgtcaccaggatggatatgctatgtgtattgactgtattccgataattggtattggaggaattggcaagacgactcttgcccagttggcatataatgatgagcgggtaatccaacattttgatattaggctgtggacttttgtctcggatgatttcaatatcaagaagatcatgaagtcaattattgagtctgtaacaagggaaaattgcaagttctcggagagtgacttacttcaagctcggctttggcatttgctgcacaacaaaagatatctaattgtattggatgatgtttggactgaagatcaagatgactgggacaaactaagacctttgtttagaggaggtgttgatggatgcaaaatcattatcacttcccgcaataaaaaagtcccattcatgatggactccccaacttcggcatattatttgaagggtttgatggaggatgactgctgggctttgttcaagcaacgagcttttggacaaggagaagaagagaagtatgccaacctctgcctgattggaaagaagattgcgaagaaatgtggtggtgtaccattggcagccaaaagtttgggaagtgttatgcgctttaaaagagaagaacggcaatggttgtttatgcaaaatagtgaactctgggaagtagaaggatggaaacaaagaattttacctgcgcttatgttgagttatcttcatctgccatcacatcttcgacaatgctttgcgttctgctccatatttcctaaaaattatgaattcaagaagcataaattagttctcttgtggatggcagagggcttaattctagaagaaagtggcaagcgaccggaagacattggtgatgaatacttttctgatttgctgtggatgtctttctttcaagaagtagagttacgtgatggtggcagcacagttggatacaaaatgaatgatgtcattcatgaccttgcacgatatgtttctggaaatgaatccgttatgcttgaacaaggtcttccaccgagtaatccagcacaaattcgccgctcatccattatttataaatacagggaagttacaattccagaagctctctttgaagcagcacatttacgaactgtcttattgattggagaatatggacttctaaaagacagtagtaaaatgttattaaattgtatatacctgcgtgtgctggacttgaacaactgtgatgttcattttttgccgtcatcaataggtgggttgatatgtttgaggtatctcgacttgtcttatacacccatctccaagttgccggcaaccacaaggaatctctgttcattgcagactttaaacctgtctggatgtcataatcttagagtcttgccagacttcaaattaatggccagcctaagacatttcaatatagctggatgtgataggttgtggtatatacctcctggtattaaaatgttacttcaacttcagacactgccattatatttcgttcagaagagggtcggtgatcttggtgtactagagaatttgaatctttatggggagttgaatattacacgcttggagaatgtgagaagcgcaactggagctcaatcatctggactgaagatgaaagaaaatcttgagtcgttgggattatgttggggagattttgaagatgtgaacgacaggaaaaaatcattgaagaaactagccaagtccccagccaaaaggttttttttagaagcaggggtacggtggcatgaacctgatgctgaagaggcggtagaaattcttgatggcctgaaaccacacaagaatctgaaaaagctagttatacatggttatccaggaatcagatttccagattggaaactgccaaatctgattgcagttgatttgtccaattgtaagaactgtgaatatcttccagcccttgggaatcttcttctactcaagactctttctctgcacggaatggagagcgtgacacgcattggttttgagttctatggtgatagtacagacatatgcttttcatcacttgaagaactatcgctcagtgattttccgaacttggaaacctggtcgagtgcaaataatgaaaatgcatttccgagcttgaggaagttcaccataaataggtgtcccaagttgacacatatcccattttgtttgtctcttcaacatttggagctgcgggattgtaatccatcttcaatcttcattggaggtttaactttgctgacagtgcttgtaatagaaaaacttccacacaaaaacctgaatttagtcataatatcatcaaccataatatcaaaacctccaaatgaaccaaaacttgaaaacacattacctaaaccagaattttaccataaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

954

Amino Acids

108.72

Weight (kDa)

6.76

Isoelectric Point (pI)

48.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1566
Acc36I ACCTGC 2 cut(s) 1204, 1698
AccB7I CCANNNNNTGG 1 cut(s) 2420
AccBSI CCGCTC 2 cut(s) 622, 1551
AciI CCGC 6 cut(s) 77, 622, 898, 1549, 2267, 2683
AcoI YGGCCR 1 cut(s) 1890
AcsI RAATTY 7 cut(s) 1188, 1280, 1542, 2029, 2274, 2770, 2849
AcuI CTGAAG 4 cut(s) 840, 1955, 2129, 2280
AfaI GTAC 4 cut(s) 1077, 2022, 2238, 2506
AfiI CCNNNNNNNGG 4 cut(s) 566, 937, 2420, 2625
AjnI CCWGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
AloI GAACNNNNNNTCC 2 cut(s) 1807, 1839
Alw21I GWGCWC 1 cut(s) 2095
Alw26I GTCTC 3 cut(s) 428, 667, 2667
AlwNI CAGNNNCTG 1 cut(s) 1978
AoxI GGCC 3 cut(s) 271, 1890, 2284
ApaI GGGCCC 1 cut(s) 275
ApeKI GCWGC 7 cut(s) 215, 251, 775, 1085, 1431, 1607, 2680
ApoI RAATTY 7 cut(s) 1188, 1280, 1542, 2029, 2274, 2770, 2849
AseI ATTAAT 1 cut(s) 1886
Asp700I GAANNNNTTC 2 cut(s) 2409, 2751
AspLEI GCGC 3 cut(s) 1113, 1201, 2084
AspS9I GGNCC 3 cut(s) 271, 272, 294
AsuHPI GGTGA 6 cut(s) 12, 515, 1376, 2021, 2510, 2608
AvaII GGWCC 1 cut(s) 294
BaeGI GKGCMC 1 cut(s) 275
BalI TGGCCA 1 cut(s) 1892
BanII GRGCYC 2 cut(s) 275, 2095
BarI GAAGNNNNNNTAC 6 cut(s) 1401, 1433, 2220, 2252, 2683, 2715
BbsI GAAGAC 2 cut(s) 1362, 1511
Bbv12I GWGCWC 1 cut(s) 2095
BbvI GCAGC 7 cut(s) 227, 238, 762, 1097, 1443, 1619, 2667
BceAI ACGGC 3 cut(s) 167, 1145, 1717
BciT130I CCWGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
BciVI GTATCC 1 cut(s) 1436
BcoDI GTCTC 3 cut(s) 428, 667, 2667
BfaI CTAG 5 cut(s) 438, 1331, 2024, 2195, 2315
BfuAI ACCTGC 2 cut(s) 1204, 1698
BfuI GTATCC 1 cut(s) 1436
BglI GCCNNNNNGGC 1 cut(s) 605
BisI GCNGC 8 cut(s) 216, 252, 776, 1086, 1432, 1549, 1608, 2681
BlsI GCNGC 8 cut(s) 217, 253, 777, 1087, 1433, 1550, 1609, 2682
Bme1390I CCNGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
Bme18I GGWCC 1 cut(s) 294
BmgT120I GGNCC 3 cut(s) 271, 272, 294
BmiI GGNNCC 1 cut(s) 273
BmrFI CCNGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
BmrI ACTGGG 3 cut(s) 53, 595, 844
BmsI GCATC 7 cut(s) 62, 142, 214, 310, 330, 866, 2245
BmuI ACTGGG 3 cut(s) 53, 595, 844
BoxI GACNNNNGTC 1 cut(s) 659
BpiI GAAGAC 2 cut(s) 1362, 1511
BplI GAGNNNNNCTC 2 cut(s) 425, 457
BpmI CTGGAG 2 cut(s) 89, 2109
BpuEI CTTGAG 4 cut(s) 191, 2147, 2423, 2626
BsaAI YACGTR 1 cut(s) 1421
BsaBI GATNNNNATC 1 cut(s) 2691
BsaJI CCNNGG 3 cut(s) 123, 274, 2419
BsaWI WCCGGW 1 cut(s) 1351
Bsc4I CCNNNNNNNGG 4 cut(s) 566, 937, 2420, 2625
Bse118I RCCGGY 1 cut(s) 1801
Bse1I ACTGG 4 cut(s) 59, 601, 839, 2092
Bse3DI GCAATG 2 cut(s) 1139, 1826
Bse8I GATNNNNATC 1 cut(s) 2691
BseBI CCWGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
BseDI CCNNGG 3 cut(s) 123, 274, 2419
BseJI GATNNNNATC 1 cut(s) 2691
BseLI CCNNNNNNNGG 4 cut(s) 566, 937, 2420, 2625
BseMI GCAATG 2 cut(s) 1139, 1826
BseMII CTCAG 3 cut(s) 444, 507, 2557
BseNI ACTGG 4 cut(s) 59, 601, 839, 2092
BseRI GAGGAG 2 cut(s) 173, 876
BseSI GKGCMC 1 cut(s) 275
BseXI GCAGC 7 cut(s) 227, 238, 762, 1097, 1443, 1619, 2667
BseYI CCCAGC 2 cut(s) 975, 2206
BsgI GTGCAG 2 cut(s) 761, 2438
Bsh1285I CGRYCG 1 cut(s) 1352
BshFI GGCC 3 cut(s) 273, 1892, 2286
BsiEI CGRYCG 1 cut(s) 1352
BsiHKAI GWGCWC 1 cut(s) 2095
BsiSI CCGG 3 cut(s) 187, 1352, 1802
BslFI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
BslI CCNNNNNNNGG 4 cut(s) 566, 937, 2420, 2625
BsmAI GTCTC 3 cut(s) 428, 667, 2667
BsmFI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
BsnI GGCC 3 cut(s) 273, 1892, 2286
Bsp120I GGGCCC 1 cut(s) 271
Bsp1286I GDGCHC 2 cut(s) 275, 2095
Bsp143I GATC 4 cut(s) 36, 687, 823, 2011
BspACI CCGC 6 cut(s) 77, 622, 898, 1549, 2267, 2683
BspANI GGCC 3 cut(s) 273, 1892, 2286
BspCNI CTCAG 3 cut(s) 445, 508, 2556
BspHI TCATGA 4 cut(s) 220, 690, 918, 1465
BspLI GGNNCC 1 cut(s) 273
BspMI ACCTGC 2 cut(s) 1204, 1698
BspQI GCTCTTC 1 cut(s) 466
BsrBI CCGCTC 2 cut(s) 622, 1551
BsrDI GCAATG 2 cut(s) 1139, 1826
BsrFI RCCGGY 1 cut(s) 1801
BsrI ACTGG 4 cut(s) 59, 601, 839, 2092
BssAI RCCGGY 1 cut(s) 1801
BssECI CCNNGG 3 cut(s) 123, 274, 2419
BssMI GATC 4 cut(s) 36, 687, 823, 2011
BssT1I CCWWGG 2 cut(s) 123, 2419
Bst2UI CCWGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
Bst6I CTCTTC 5 cut(s) 466, 1011, 1994, 2256, 2670
BstAPI GCANNNNNTGC 1 cut(s) 775
BstBAI YACGTR 1 cut(s) 1421
BstC8I GCNNGC 4 cut(s) 75, 1346, 1803, 1894
BstDEI CTNAG 6 cut(s) 453, 516, 845, 1862, 1898, 2543
BstHHI GCGC 3 cut(s) 1113, 1201, 2084
BstKTI GATC 4 cut(s) 39, 690, 826, 2014
BstMAI GTCTC 3 cut(s) 428, 667, 2667
BstMBI GATC 4 cut(s) 36, 687, 823, 2011
BstMCI CGRYCG 1 cut(s) 1352
BstMWI GCNNNNNNNGC 8 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734
BstNI CCWGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
BstNSI RCATGY 1 cut(s) 122
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
BstSLI GKGCMC 1 cut(s) 275
BstV1I GCAGC 7 cut(s) 227, 238, 762, 1097, 1443, 1619, 2667
BstV2I GAAGAC 2 cut(s) 1362, 1511
BstXI CCANNNNNNTGG 1 cut(s) 1096
BsuI GTATCC 1 cut(s) 1436
BsuRI GGCC 3 cut(s) 273, 1892, 2286
BtsI GCAGTG 1 cut(s) 1976
BtsIMutI CAGTG 3 cut(s) 1976, 2551, 2739
BveI ACCTGC 2 cut(s) 1204, 1698
Cac8I GCNNGC 4 cut(s) 75, 1346, 1803, 1894
CaiI CAGNNNCTG 1 cut(s) 1978
CciI TCATGA 4 cut(s) 220, 690, 918, 1465
CfoI GCGC 3 cut(s) 1113, 1201, 2084
Cfr10I RCCGGY 1 cut(s) 1801
Cfr13I GGNCC 3 cut(s) 271, 272, 294
CsiI ACCWGGT 1 cut(s) 2567
Csp6I GTAC 4 cut(s) 1076, 2021, 2237, 2505
CviAII CATG 9 cut(s) 91, 119, 130, 221, 691, 919, 1466, 2246, 2324
CviQI GTAC 4 cut(s) 1076, 2021, 2237, 2505
DdeI CTNAG 6 cut(s) 453, 516, 845, 1862, 1898, 2543
DpnI GATC 4 cut(s) 38, 689, 825, 2013
DpnII GATC 4 cut(s) 36, 687, 823, 2011
DraI TTTAAA 2 cut(s) 1117, 1839
EaeI YGGCCR 1 cut(s) 1890
Eam1104I CTCTTC 5 cut(s) 466, 1011, 1994, 2256, 2670
EarI CTCTTC 5 cut(s) 466, 1011, 1994, 2256, 2670
Ecl136II GAGCTC 1 cut(s) 2093
Eco130I CCWWGG 2 cut(s) 123, 2419
Eco24I GRGCYC 2 cut(s) 275, 2095
Eco32I GATATC 2 cut(s) 82, 791
Eco47I GGWCC 1 cut(s) 294
Eco53kI GAGCTC 1 cut(s) 2093
Eco57I CTGAAG 4 cut(s) 840, 1955, 2129, 2280
EcoICRI GAGCTC 1 cut(s) 2093
EcoO109I RGGNCCY 1 cut(s) 272
EcoRI GAATTC 1 cut(s) 1280
EcoRII CCWGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
EcoRV GATATC 2 cut(s) 82, 791
EcoT14I CCWWGG 2 cut(s) 123, 2419
EcoT22I ATGCAT 1 cut(s) 2596
EcoT38I GRGCYC 2 cut(s) 275, 2095
ErhI CCWWGG 2 cut(s) 123, 2419
FaeI CATG 9 cut(s) 94, 122, 133, 224, 694, 922, 1469, 2249, 2327
FalI AAGNNNNNCTT 6 cut(s) 129, 161, 747, 779, 2109, 2141
FaqI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
FatI CATG 9 cut(s) 90, 118, 129, 220, 690, 918, 1465, 2245, 2323
FauI CCCGC 3 cut(s) 615, 905, 2676
FauNDI CATATG 1 cut(s) 2513
Fnu4HI GCNGC 8 cut(s) 216, 252, 776, 1086, 1432, 1549, 1608, 2681
FriOI GRGCYC 2 cut(s) 275, 2095
Fsp4HI GCNGC 8 cut(s) 216, 252, 776, 1086, 1432, 1549, 1608, 2681
FspBI CTAG 5 cut(s) 438, 1331, 2024, 2195, 2315
GlaI GCGC 3 cut(s) 1112, 1200, 2083
GluI GCNGC 8 cut(s) 216, 252, 776, 1086, 1432, 1549, 1608, 2681
GsaI CCCAGC 2 cut(s) 979, 2210
GsuI CTGGAG 2 cut(s) 89, 2109
HaeIII GGCC 3 cut(s) 273, 1892, 2286
HapII CCGG 3 cut(s) 187, 1352, 1802
HhaI GCGC 3 cut(s) 1113, 1201, 2084
Hin1II CATG 9 cut(s) 94, 122, 133, 224, 694, 922, 1469, 2249, 2327
Hin6I GCGC 3 cut(s) 1111, 1199, 2082
HinP1I GCGC 3 cut(s) 1111, 1199, 2082
HincII GTYRAC 1 cut(s) 2640
HindII GTYRAC 1 cut(s) 2640
HindIII AAGCTT 1 cut(s) 71
HpaII CCGG 3 cut(s) 187, 1352, 1802
HphI GGTGA 6 cut(s) 12, 515, 1376, 2021, 2510, 2608
Hpy166II GTNNAC 9 cut(s) 294, 367, 654, 1076, 1157, 2021, 2167, 2616, 2640
Hpy8I GTNNAC 9 cut(s) 294, 367, 654, 1076, 1157, 2021, 2167, 2616, 2640
HpyAV CCTTC 4 cut(s) 88, 245, 946, 1166
HpyCH4IV ACGT 2 cut(s) 9, 1420
HpyF10VI GCNNNNNNNGC 8 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734
HpyF3I CTNAG 6 cut(s) 453, 516, 845, 1862, 1898, 2543
HpySE526I ACGT 2 cut(s) 9, 1420
Hsp92II CATG 9 cut(s) 94, 122, 133, 224, 694, 922, 1469, 2249, 2327
HspAI GCGC 3 cut(s) 1111, 1199, 2082
KroI GCCGGC 1 cut(s) 1801
KroNI GCCGGC 1 cut(s) 1803
Kzo9I GATC 4 cut(s) 36, 687, 823, 2011
LguI GCTCTTC 1 cut(s) 466
LmnI GCTCC 4 cut(s) 160, 1262, 2090, 2677
Lsp1109I GCAGC 7 cut(s) 227, 238, 762, 1097, 1443, 1619, 2667
LweI GCATC 7 cut(s) 62, 142, 214, 310, 330, 866, 2245
MabI ACCWGGT 1 cut(s) 2567
MaeI CTAG 5 cut(s) 438, 1331, 2024, 2195, 2315
MaeII ACGT 2 cut(s) 9, 1420
MaeIII GTNAC 8 cut(s) 504, 521, 712, 743, 1416, 1579, 1959, 2470
MalI GATC 4 cut(s) 38, 689, 825, 2013
MbiI CCGCTC 2 cut(s) 622, 1551
MboI GATC 4 cut(s) 36, 687, 823, 2011
MfeI CAATTG 1 cut(s) 2389
MhlI GDGCHC 2 cut(s) 275, 2095
MlsI TGGCCA 1 cut(s) 1892
MluNI TGGCCA 1 cut(s) 1892
MlyI GAGTC 7 cut(s) 464, 586, 716, 920, 1875, 2138, 2437
MmeI TCCRAC 2 cut(s) 655, 1420
Mox20I TGGCCA 1 cut(s) 1892
Mph1103I ATGCAT 1 cut(s) 2596
MroNI GCCGGC 1 cut(s) 1801
MroXI GAANNNNTTC 2 cut(s) 2409, 2751
MscI TGGCCA 1 cut(s) 1892
MseI TTAA 8 cut(s) 387, 1116, 1325, 1676, 1838, 1886, 1953, 2720
MslI CAYNNNNRTG 2 cut(s) 266, 528
Msp20I TGGCCA 1 cut(s) 1892
MspI CCGG 3 cut(s) 187, 1352, 1802
MspR9I CCNGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
MunI CAATTG 1 cut(s) 2389
MvaI CCWGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
MwoI GCNNNNNNNGC 8 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734
NaeI GCCGGC 1 cut(s) 1803
NdeI CATATG 1 cut(s) 2513
NdeII GATC 4 cut(s) 36, 687, 823, 2011
NgoMIV GCCGGC 1 cut(s) 1801
NlaIII CATG 9 cut(s) 94, 122, 133, 224, 694, 922, 1469, 2249, 2327
NlaIV GGNNCC 1 cut(s) 273
NmeAIII GCCGAG 1 cut(s) 739
NmuCI GTSAC 3 cut(s) 521, 743, 2470
NsiI ATGCAT 1 cut(s) 2596
NspI RCATGY 1 cut(s) 122
PagI TCATGA 4 cut(s) 220, 690, 918, 1465
PciSI GCTCTTC 1 cut(s) 466
PdiI GCCGGC 1 cut(s) 1803
PdmI GAANNNNTTC 2 cut(s) 2409, 2751
PfeI GAWTC 6 cut(s) 1496, 1816, 2035, 2302, 2337, 2425
PflMI CCANNNNNTGG 1 cut(s) 2420
PfoI TCCNGGA 1 cut(s) 2332
PkrI GCNGC 8 cut(s) 217, 253, 777, 1087, 1433, 1550, 1609, 2682
PleI GAGTC 7 cut(s) 463, 586, 715, 920, 1874, 2137, 2437
PpsI GAGTC 7 cut(s) 463, 586, 715, 920, 1874, 2137, 2437
Ppu21I YACGTR 1 cut(s) 1421
PshAI GACNNNNGTC 1 cut(s) 659
PshBI ATTAAT 1 cut(s) 1886
PsiI TTATAA 1 cut(s) 1566
Psp124BI GAGCTC 1 cut(s) 2095
Psp6I CCWGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
PspFI CCCAGC 2 cut(s) 975, 2206
PspGI CCWGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
PspN4I GGNNCC 1 cut(s) 273
PspOMI GGGCCC 1 cut(s) 271
PspPI GGNCC 3 cut(s) 271, 272, 294
PstNI CAGNNNCTG 1 cut(s) 1978
RsaI GTAC 4 cut(s) 1077, 2022, 2238, 2506
RsaNI GTAC 4 cut(s) 1076, 2021, 2237, 2505
RseI CAYNNNNRTG 2 cut(s) 266, 528
SacI GAGCTC 1 cut(s) 2095
SapI GCTCTTC 1 cut(s) 466
SaqAI TTAA 8 cut(s) 387, 1116, 1325, 1676, 1838, 1886, 1953, 2720
SatI GCNGC 8 cut(s) 216, 252, 776, 1086, 1432, 1549, 1608, 2681
Sau3AI GATC 4 cut(s) 36, 687, 823, 2011
Sau96I GGNCC 3 cut(s) 271, 272, 294
SchI GAGTC 7 cut(s) 464, 586, 716, 920, 1875, 2138, 2437
ScrFI CCNGG 6 cut(s) 276, 402, 527, 1947, 2334, 2569
SduI GDGCHC 2 cut(s) 275, 2095
SexAI ACCWGGT 1 cut(s) 2567
SfaNI GCATC 7 cut(s) 62, 142, 214, 310, 330, 866, 2245
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 2 cut(s) 266, 528
SmlI CTYRAG 4 cut(s) 206, 2126, 2438, 2605
SmoI CTYRAG 4 cut(s) 206, 2126, 2438, 2605
SsiI CCGC 6 cut(s) 77, 622, 898, 1549, 2267, 2683
SspI AATATT 1 cut(s) 2056
SspMI CTAG 5 cut(s) 438, 1331, 2024, 2195, 2315
SstI GAGCTC 1 cut(s) 2095
StyD4I CCNGG 6 cut(s) 274, 400, 525, 1945, 2332, 2567
StyI CCWWGG 2 cut(s) 123, 2419
TaiI ACGT 2 cut(s) 12, 1423
TaqI TCGA 5 cut(s) 200, 394, 1237, 1770, 2573
TatI WGTACW 2 cut(s) 2020, 2504
TauI GCSGC 1 cut(s) 1551
TfiI GAWTC 6 cut(s) 1496, 1816, 2035, 2302, 2337, 2425
Tru1I TTAA 8 cut(s) 387, 1116, 1325, 1676, 1838, 1886, 1953, 2720
Tru9I TTAA 8 cut(s) 387, 1116, 1325, 1676, 1838, 1886, 1953, 2720
TscAI CASTG 3 cut(s) 1983, 2551, 2739
TseFI GTSAC 3 cut(s) 521, 743, 2470
TseI GCWGC 7 cut(s) 215, 251, 775, 1085, 1431, 1607, 2680
Tsp45I GTSAC 3 cut(s) 521, 743, 2470
TspGWI ACGGA 2 cut(s) 1489, 2472
TspRI CASTG 3 cut(s) 1983, 2551, 2739
Van91I CCANNNNNTGG 1 cut(s) 2420
VpaK11BI GGWCC 1 cut(s) 294
VspI ATTAAT 1 cut(s) 1886
XapI RAATTY 7 cut(s) 1188, 1280, 1542, 2029, 2274, 2770, 2849
XbaI TCTAGA 1 cut(s) 1330
XceI RCATGY 1 cut(s) 122
XmnI GAANNNNTTC 2 cut(s) 2409, 2751
XspI CTAG 5 cut(s) 438, 1331, 2024, 2195, 2315
Zsp2I ATGCAT 1 cut(s) 2596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.