Rw0G004710

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00178
Physical Location & Seq
Forward (+)
18530 .. 21433
2904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G004710.1

Sequence Viewer

Length: 2736 bp
ATGTCTAGTTTTCAGTTCAAAGAAACTCAGTCGTATGAACGGTCAAGTACCATGAAGCTACGCGAAACTGGACCCTCTGTTAATGAGTCAAAGGTGTATGGCAGAGAAGAGGATGTGGATAAGATTTTGGGAATGCTATTGTCTTCCAGCAGTGGTCCTGAATTTGCAGTAATTCCCATTTTTGGAATTGGAGGGATGGGGAAGATAACACTTGCTCAGTTAGTCTTTAATGATCCGAGGGCTACAAGCCGATTTGACTCTTCGATGTGGGTGTCTGTCAATGATAATTCTAACCCAGCAAGGATCATAAATCAAATGTTGACTTATCTCGGTGAGTGCAGCCATGACTCATTTCAGATTGGGGTGCTGCAATCTAAATTGAAAGAATCCTTACTGGAAAAAAGATACTTGATAGTGCTCGATGATGTGTGGAATAAGGATCCAGATGAATGGGACAAAGTAATGAATCCATTGAAAGCCTCTGCAGGTACAATTAAAATTATATTAACCACCCGGTGTGAGGCTGTTGCAGCCATATCTGGCACATTTCCCCCTTTCCGTTTGGAACCACTAACAAAGAAAGAGTGCTGGAAATTGTTCAAGCACCAAGCCTTTGCTGATGGAACAGAGCATGATTTTCCAAGCCTACTGCACATTGGTGAACAAATAGTAGACAAGTGCAAGGGCGTTCCATTGGTTGCAAATATTCTTGGAAGCATGCTGCGCTTTGAAAGAGATGAAAGCAAGTGGTTACATGTGCAAAGGAGCGAACTGTCGAGTATTGATGCAGGGGAGAACAAAATTCTGTCCGTCTTAAGGGTAAGTTACAATCATTTGCCATCGCGTCTGAAAGCTTGCTTTGCATATTGTTCAGTATTCCCAAAGAATTATGAGATTAATAAGGAAAAGTTGATCCATCAATGGCTCGCACATGGCTTAATTCCTGGAAACTCTTCAGTTAGGCCAGAGGACATTCGCTGTAAGTATTTTAACAATTTATTGATGATGTCTTTCTTCCAAGAAATAAGAAAATATGATGAAAGAGGTATGGCAGAATTTAAAATGCATGATCATATTAATGATCTTGCAAAATCTGTTGCTGGAGAGGAATACTTGACTCTAGGACAGGAAAATGTGCACTGTAGTCTCTCAAAGACATGTCATGCATCAGTTGTTTCCAGTTCTAGCTCTGCTTTGATCCCTGAATCCTTGTGTGAAGCAAAGAGATTGCGAACCCTCAATTTCCTGTCGCCAAGAGAGGATTATATGGAAGCCATTCCAACCATTCTAGCAACTTTTAAACATCTCAGAATGCTGAATTTCAGTGGATCTGGAATTAAGAGTCTCCACCGAGAGATTGGTGGGCTACTATCCTTGCGGTATCTTGATCTATCAAATACTCTCCTTGAGACGATGCCAGCGACCATCTGTGATCTTTGCAATTTGCAGGCCTTGAATCTCTCAAGTTGTATTGAACTCAAGGAGTTACCAAGTGGTACTTCCAAGTTAATAAATTTGAGACATCTTAACATAGATGATTGTCCAAGACTTGCTAGCATGCCCCCATCAATGGGAACTTTACGACAACTTCAAACTTTGCCGGTATATATCGTCGGCCACAACTTTGAAACTTCTATTTTTCAGCTCTCATCAATGAAAAATCTACGAGGGAAGTTAAAAATCAAATGTCTGGAGGAGGCTATAATTCCACTTGGGAACAACCTGATTAAAGTATGGATGGAATCGAAACACTTTCATTCATTAGAACTGTTGTGGCAAAATGATGGGGGCAAGCTAGATCATAATAGATCTAGTCAAGCTGGCAGGCAAGTTGATGATAGAACTGATTTTAGTCTGGTAGATTCTTTGACTGCATGGCCCTTTATAAAAAAGTTGTCAATAAATGGTTATTCTGGAACCAAGTTCCCAGATGAGATGAGCTGGCCTCAGAACTTGACTGAGCTGAACATAATTAATTGCAGAAGATGTGAAAGTCTTCATCCACTAGGTCAACTTCCTGTCCTCAAGATCCTCAACATCCAAGGAATGGATTCTGTTGTGCACATTGGTGTCGAATTCTCAGGTGAAGGTGACAGACCATTTAGTTCTCTTAAAGAGCTATCCCTCATAGACTTTCCAGAATTAAGAACTTGGAGTAGAATCGATTCCACAGAAGTATTTACTTGCCTGGAAAAACTTATTATCACAGATTGTCCTCTTTTGACAACAATGCCATGGTTTCCATGTCTCCAAGACTTGAAGCTGTGGAAGTTCATGCAGTTTGACCAAATGGTGGTAAAGTCAGCATCAGAGCTTACCACACTATCTACTCTTTGGACTAAAGTACCTCACTTCACTGAGAACTTGGAAATTGTTGAATGTCCTAGTATAATCCGTTTGCCAGAGGAAGGCATGGAAGGCTTGTGCTCACTTCGGTCATTTTCAATAGAGAACTGTCCGAGCTTAGCCTCTTTGCCTAACGGGATGAAATACCTCACATCCCTTGAAAACCTCATGCTTATGTGTTTAGATCGGGTTCATCTACCAGAGACTTTTCAATACCTCTTGGCACTTAGAAGCCTGACGATTATAAGCTGTCCAGAGCTTACAAATCTGCTGGTGGGACTGCAACATGTCCAGAATTTACAAATATTGGAAATTCATTGCTGCCCGAAACTGATGGGATTGCCTGAGTGGGTGGAGCATCTTGTTTCACTTCAATCCTTGAAAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

911

Amino Acids

103.12

Weight (kDa)

6.2

Isoelectric Point (pI)

49.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 36 - 206 1.2e-36 NB-ARC domain
WHD_DRP PF23559 292 - 363 3.7e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 410 - 710 8.3e-25 Leucine-rich repeat region
LRR_8 PF13855 435 - 490 8.4e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 548 - 683 1.8e-21 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1886, 2591
Acc36I ACCTGC 1 cut(s) 476
AccB7I CCANNNNNTGG 2 cut(s) 2047, 2293
AccI GTMKAC 1 cut(s) 672
AccII CGCG 2 cut(s) 63, 844
AciI CCGC 1 cut(s) 1378
AclWI GGATC 8 cut(s) 227, 311, 434, 447, 907, 1192, 1336, 2023
AcoI YGGCCR 1 cut(s) 1615
AcsI RAATTY 8 cut(s) 161, 801, 1055, 1318, 1513, 2075, 2641, 2658
AcuI CTGAAG 1 cut(s) 939
AdeI CACNNNGTG 1 cut(s) 516
AfaI GTAC 4 cut(s) 49, 490, 1498, 2346
AfiI CCNNNNNNNGG 8 cut(s) 182, 520, 816, 1570, 1571, 2047, 2293, 2408
AflII CTTAAG 1 cut(s) 814
AflIII ACRYGT 3 cut(s) 754, 1157, 2632
AjnI CCWGG 2 cut(s) 943, 2187
AjuI GAANNNNNNNTTGG 2 cut(s) 1483, 1515
AleI CACNNNNGTG 2 cut(s) 657, 2067
Alw21I GWGCWC 4 cut(s) 420, 1140, 2064, 2429
Alw26I GTCTC 6 cut(s) 1151, 1349, 1403, 1513, 2252, 2543
Alw44I GTGCAC 2 cut(s) 1136, 2060
AlwI GGATC 8 cut(s) 227, 311, 434, 447, 907, 1192, 1336, 2023
AoxI GGCC 5 cut(s) 962, 1449, 1615, 1877, 1943
ApaLI GTGCAC 2 cut(s) 1136, 2060
ApeKI GCWGC 5 cut(s) 339, 367, 530, 721, 2667
ApoI RAATTY 8 cut(s) 161, 801, 1055, 1318, 1513, 2075, 2641, 2658
AseI ATTAAT 3 cut(s) 897, 1077, 1974
Asp700I GAANNNNTTC 6 cut(s) 596, 952, 1275, 1995, 2050, 2164
AspLEI GCGC 1 cut(s) 726
AspS9I GGNCC 3 cut(s) 71, 155, 1878
AsuC2I CCSGG 1 cut(s) 514
AsuHPI GGTGA 4 cut(s) 344, 671, 2096, 2102
AsuNHI GCTAGC 1 cut(s) 1553
AvaII GGWCC 2 cut(s) 71, 155
BaeGI GKGCMC 2 cut(s) 1140, 2064
BaeI ACNNNNGTAYC 2 cut(s) 2328, 2361
BamHI GGATCC 1 cut(s) 439
BbsI GAAGAC 2 cut(s) 135, 1988
Bbv12I GWGCWC 4 cut(s) 420, 1140, 2064, 2429
BbvI GCAGC 5 cut(s) 351, 354, 542, 708, 2654
BccI CCATC 9 cut(s) 190, 614, 847, 924, 1433, 1573, 1732, 1778, 2674
BciT130I CCWGG 2 cut(s) 945, 2189
BclI TGATCA 1 cut(s) 1069
BcnI CCSGG 1 cut(s) 514
BcoDI GTCTC 6 cut(s) 1151, 1349, 1403, 1513, 2252, 2543
BfaI CTAG 9 cut(s) 6, 1121, 1185, 1289, 1554, 1796, 1812, 2006, 2385
BfmI CTRYAG 2 cut(s) 483, 1141
BfrI CTTAAG 1 cut(s) 814
BfuAI ACCTGC 1 cut(s) 476
BglII AGATCT 1 cut(s) 1808
BisI GCNGC 5 cut(s) 340, 368, 531, 722, 2668
BlpI GCTNAGC 1 cut(s) 2464
BlsI GCNGC 5 cut(s) 341, 369, 532, 723, 2669
Bme1390I CCNGG 3 cut(s) 514, 945, 2189
Bme18I GGWCC 2 cut(s) 71, 155
BmgT120I GGNCC 3 cut(s) 71, 155, 1878
BmiI GGNNCC 4 cut(s) 73, 441, 567, 1918
BmrFI CCNGG 3 cut(s) 514, 945, 2189
BmsI GCATC 5 cut(s) 775, 1175, 1404, 2315, 2713
BmtI GCTAGC 1 cut(s) 1557
BpiI GAAGAC 2 cut(s) 135, 1988
BplI GAGNNNNNCTC 2 cut(s) 1930, 1962
BpmI CTGGAG 2 cut(s) 1122, 1712
Bpu1102I GCTNAGC 1 cut(s) 2464
BpuEI CTTGAG 4 cut(s) 1427, 1447, 1463, 2009
BpuMI CCSGG 1 cut(s) 514
Bsa29I ATCGAT 1 cut(s) 2163
BsaJI CCNNGG 3 cut(s) 236, 2041, 2234
Bsc4I CCNNNNNNNGG 8 cut(s) 182, 520, 816, 1570, 1571, 2047, 2293, 2408
Bse118I RCCGGY 1 cut(s) 1600
Bse1I ACTGG 3 cut(s) 73, 399, 1179
Bse3DI GCAATG 1 cut(s) 2662
BseBI CCWGG 2 cut(s) 945, 2189
BseCI ATCGAT 1 cut(s) 2163
BseDI CCNNGG 3 cut(s) 236, 2041, 2234
BseGI GGATG 7 cut(s) 118, 201, 1743, 1999, 2037, 2490, 2498
BseLI CCNNNNNNNGG 8 cut(s) 182, 520, 816, 1570, 1571, 2047, 2293, 2408
BseMI GCAATG 1 cut(s) 2662
BseMII CTCAG 8 cut(s) 41, 230, 1321, 1950, 1961, 2094, 2349, 2682
BseNI ACTGG 3 cut(s) 73, 399, 1179
BseRI GAGGAG 1 cut(s) 1709
BseSI GKGCMC 2 cut(s) 1140, 2064
BseXI GCAGC 5 cut(s) 351, 354, 542, 708, 2654
BseYI CCCAGC 1 cut(s) 295
BsgI GTGCAG 2 cut(s) 358, 635
Bsh1236I CGCG 2 cut(s) 63, 844
BshFI GGCC 5 cut(s) 964, 1451, 1617, 1879, 1945
BshVI ATCGAT 1 cut(s) 2163
BsiHKAI GWGCWC 4 cut(s) 420, 1140, 2064, 2429
BsiSI CCGG 2 cut(s) 514, 1601
BslFI GGGAC 2 cut(s) 467, 2637
BslI CCNNNNNNNGG 8 cut(s) 182, 520, 816, 1570, 1571, 2047, 2293, 2408
BsmAI GTCTC 6 cut(s) 1151, 1349, 1403, 1513, 2252, 2543
BsmBI CGTCTC 1 cut(s) 1403
BsmFI GGGAC 2 cut(s) 467, 2637
BsmI GAATGC 2 cut(s) 138, 1317
BsnI GGCC 5 cut(s) 964, 1451, 1617, 1879, 1945
Bsp1286I GDGCHC 4 cut(s) 420, 1140, 2064, 2429
Bsp1720I GCTNAGC 1 cut(s) 2464
Bsp19I CCATGG 1 cut(s) 2234
BspACI CCGC 1 cut(s) 1378
BspANI GGCC 5 cut(s) 964, 1451, 1617, 1879, 1945
BspCNI CTCAG 8 cut(s) 40, 229, 1320, 1951, 1960, 2093, 2350, 2683
BspDI ATCGAT 1 cut(s) 2163
BspFNI CGCG 2 cut(s) 63, 844
BspLI GGNNCC 4 cut(s) 73, 441, 567, 1918
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 476
BspOI GCTAGC 1 cut(s) 1557
BspPI GGATC 8 cut(s) 227, 311, 434, 447, 907, 1192, 1336, 2023
BspTI CTTAAG 1 cut(s) 814
BsrDI GCAATG 1 cut(s) 2662
BsrFI RCCGGY 1 cut(s) 1600
BsrI ACTGG 3 cut(s) 73, 399, 1179
BssAI RCCGGY 1 cut(s) 1600
BssECI CCNNGG 3 cut(s) 236, 2041, 2234
BssT1I CCWWGG 2 cut(s) 2041, 2234
Bst2UI CCWGG 2 cut(s) 945, 2189
Bst4CI ACNGT 5 cut(s) 42, 774, 1142, 1770, 2456
Bst6I CTCTTC 3 cut(s) 102, 265, 958
BstAFI CTTAAG 1 cut(s) 814
BstDSI CCRYGG 1 cut(s) 2234
BstF5I GGATG 7 cut(s) 118, 201, 1743, 1999, 2037, 2490, 2498
BstFNI CGCG 2 cut(s) 63, 844
BstHHI GCGC 1 cut(s) 726
BstMAI GTCTC 6 cut(s) 1151, 1349, 1403, 1513, 2252, 2543
BstMWI GCNNNNNNNGC 4 cut(s) 530, 723, 860, 2418
BstNI CCWGG 2 cut(s) 945, 2189
BstNSI RCATGY 5 cut(s) 721, 758, 1161, 1561, 2636
BstSCI CCNGG 3 cut(s) 512, 943, 2187
BstSFI CTRYAG 2 cut(s) 483, 1141
BstSLI GKGCMC 2 cut(s) 1140, 2064
BstUI CGCG 2 cut(s) 63, 844
BstV1I GCAGC 5 cut(s) 351, 354, 542, 708, 2654
BstV2I GAAGAC 2 cut(s) 135, 1988
BstX2I RGATCY 4 cut(s) 439, 1328, 1808, 2028
BstXI CCANNNNNNTGG 1 cut(s) 450
BstYI RGATCY 4 cut(s) 439, 1328, 1808, 2028
Bsu15I ATCGAT 1 cut(s) 2163
BsuRI GGCC 5 cut(s) 964, 1451, 1617, 1879, 1945
BsuTUI ATCGAT 1 cut(s) 2163
BtgI CCRYGG 1 cut(s) 2234
BtgZI GCGATG 1 cut(s) 825
BtsCI GGATG 7 cut(s) 118, 201, 1743, 1999, 2037, 2490, 2498
BtsI GCAGTG 1 cut(s) 157
BtsIMutI CAGTG 4 cut(s) 157, 1138, 1330, 2355
BveI ACCTGC 1 cut(s) 476
CfoI GCGC 1 cut(s) 726
Cfr10I RCCGGY 1 cut(s) 1600
Cfr13I GGNCC 3 cut(s) 71, 155, 1878
ClaI ATCGAT 1 cut(s) 2163
CseI GACGC 1 cut(s) 833
Csp6I GTAC 4 cut(s) 48, 489, 1497, 2345
CviQI GTAC 4 cut(s) 48, 489, 1497, 2345
DraI TTTAAA 2 cut(s) 1060, 1300
DraIII CACNNNGTG 1 cut(s) 516
EaeI YGGCCR 1 cut(s) 1615
Eam1104I CTCTTC 3 cut(s) 102, 265, 958
EarI CTCTTC 3 cut(s) 102, 265, 958
Eco130I CCWWGG 2 cut(s) 2041, 2234
Eco147I AGGCCT 1 cut(s) 1451
Eco47I GGWCC 2 cut(s) 71, 155
Eco57I CTGAAG 1 cut(s) 939
EcoRI GAATTC 1 cut(s) 2075
EcoRII CCWGG 2 cut(s) 943, 2187
EcoT14I CCWWGG 2 cut(s) 2041, 2234
EcoT22I ATGCAT 2 cut(s) 1068, 1168
ErhI CCWWGG 2 cut(s) 2041, 2234
Esp3I CGTCTC 1 cut(s) 1403
FalI AAGNNNNNCTT 2 cut(s) 1483, 1515
FaqI GGGAC 2 cut(s) 467, 2637
FbaI TGATCA 1 cut(s) 1069
FblI GTMKAC 1 cut(s) 672
Fnu4HI GCNGC 5 cut(s) 340, 368, 531, 722, 2668
FokI GGATG 7 cut(s) 125, 208, 1750, 1986, 2024, 2485, 2497
Fsp4HI GCNGC 5 cut(s) 340, 368, 531, 722, 2668
FspBI CTAG 9 cut(s) 6, 1121, 1185, 1289, 1554, 1796, 1812, 2006, 2385
GlaI GCGC 1 cut(s) 725
GluI GCNGC 5 cut(s) 340, 368, 531, 722, 2668
GsaI CCCAGC 1 cut(s) 299
GsuI CTGGAG 2 cut(s) 1122, 1712
HaeIII GGCC 5 cut(s) 964, 1451, 1617, 1879, 1945
HapII CCGG 2 cut(s) 514, 1601
HgaI GACGC 1 cut(s) 833
HhaI GCGC 1 cut(s) 726
Hin6I GCGC 1 cut(s) 724
HinP1I GCGC 1 cut(s) 724
HincII GTYRAC 2 cut(s) 321, 2012
HindII GTYRAC 2 cut(s) 321, 2012
HindIII AAGCTT 1 cut(s) 852
HpaII CCGG 2 cut(s) 514, 1601
HphI GGTGA 4 cut(s) 344, 671, 2096, 2102
Hpy166II GTNNAC 6 cut(s) 321, 662, 673, 1138, 2012, 2062
Hpy188I TCNGA 8 cut(s) 237, 357, 849, 1310, 1950, 2311, 2460, 2735
Hpy8I GTNNAC 6 cut(s) 321, 662, 673, 1138, 2012, 2062
Hpy99I CGWCG 1 cut(s) 1616
HpyAV CCTTC 3 cut(s) 2081, 2402, 2411
HpyCH4III ACNGT 5 cut(s) 42, 774, 1142, 1770, 2456
HpyF10VI GCNNNNNNNGC 4 cut(s) 530, 723, 860, 2418
HspAI GCGC 1 cut(s) 724
Ksp22I TGATCA 1 cut(s) 1069
LmnI GCTCC 2 cut(s) 765, 2701
Lsp1109I GCAGC 5 cut(s) 351, 354, 542, 708, 2654
LweI GCATC 5 cut(s) 775, 1175, 1404, 2315, 2713
MaeI CTAG 9 cut(s) 6, 1121, 1185, 1289, 1554, 1796, 1812, 2006, 2385
MaeIII GTNAC 4 cut(s) 750, 824, 1485, 2090
MboII GAAGA 8 cut(s) 119, 135, 214, 252, 945, 1006, 1988, 1995
MflI RGATCY 4 cut(s) 439, 1328, 1808, 2028
MhlI GDGCHC 4 cut(s) 420, 1140, 2064, 2429
MlyI GAGTC 5 cut(s) 95, 251, 341, 1111, 1351
MmeI TCCRAC 1 cut(s) 1304
Mph1103I ATGCAT 2 cut(s) 1068, 1168
MroXI GAANNNNTTC 6 cut(s) 596, 952, 1275, 1995, 2050, 2164
MslI CAYNNNNRTG 4 cut(s) 657, 1077, 2067, 2519
MspCI CTTAAG 1 cut(s) 814
MspI CCGG 2 cut(s) 514, 1601
MspR9I CCNGG 3 cut(s) 514, 945, 2189
Mva1269I GAATGC 2 cut(s) 138, 1317
MvaI CCWGG 2 cut(s) 945, 2189
MvnI CGCG 2 cut(s) 63, 844
MwoI GCNNNNNNNGC 4 cut(s) 530, 723, 860, 2418
NciI CCSGG 1 cut(s) 514
NcoI CCATGG 1 cut(s) 2234
NheI GCTAGC 1 cut(s) 1553
NlaIV GGNNCC 4 cut(s) 73, 441, 567, 1918
NmuCI GTSAC 1 cut(s) 2090
NsiI ATGCAT 2 cut(s) 1068, 1168
NspI RCATGY 5 cut(s) 721, 758, 1161, 1561, 2636
OliI CACNNNNGTG 2 cut(s) 657, 2067
PaeI GCATGC 2 cut(s) 721, 1561
PceI AGGCCT 1 cut(s) 1451
PciI ACATGT 3 cut(s) 754, 1157, 2632
PcsI WCGNNNNNNNCGW 1 cut(s) 1418
PctI GAATGC 2 cut(s) 138, 1317
PdmI GAANNNNTTC 6 cut(s) 596, 952, 1275, 1995, 2050, 2164
PfeI GAWTC 9 cut(s) 386, 466, 1205, 1456, 1742, 1862, 2051, 2160, 2165
PflMI CCANNNNNTGG 2 cut(s) 2047, 2293
PfoI TCCNGGA 1 cut(s) 943
PkrI GCNGC 5 cut(s) 341, 369, 532, 723, 2669
PleI GAGTC 5 cut(s) 94, 251, 341, 1111, 1350
PpsI GAGTC 5 cut(s) 94, 251, 341, 1111, 1350
PscI ACATGT 3 cut(s) 754, 1157, 2632
PshBI ATTAAT 3 cut(s) 897, 1077, 1974
PsiI TTATAA 2 cut(s) 1886, 2591
Psp6I CCWGG 2 cut(s) 943, 2187
PspFI CCCAGC 1 cut(s) 295
PspGI CCWGG 2 cut(s) 943, 2187
PspN4I GGNNCC 4 cut(s) 73, 441, 567, 1918
PspPI GGNCC 3 cut(s) 71, 155, 1878
PstI CTGCAG 1 cut(s) 487
PsuI RGATCY 4 cut(s) 439, 1328, 1808, 2028
RsaI GTAC 4 cut(s) 49, 490, 1498, 2346
RsaNI GTAC 4 cut(s) 48, 489, 1497, 2345
RseI CAYNNNNRTG 4 cut(s) 657, 1077, 2067, 2519
SatI GCNGC 5 cut(s) 340, 368, 531, 722, 2668
Sau96I GGNCC 3 cut(s) 71, 155, 1878
SchI GAGTC 5 cut(s) 95, 251, 341, 1111, 1351
ScrFI CCNGG 3 cut(s) 514, 945, 2189
SduI GDGCHC 4 cut(s) 420, 1140, 2064, 2429
SfaNI GCATC 5 cut(s) 775, 1175, 1404, 2315, 2713
SfcI CTRYAG 2 cut(s) 483, 1141
SinI GGWCC 2 cut(s) 71, 155
SmiMI CAYNNNNRTG 4 cut(s) 657, 1077, 2067, 2519
SmlI CTYRAG 5 cut(s) 814, 1406, 1462, 1478, 2024
SmoI CTYRAG 5 cut(s) 814, 1406, 1462, 1478, 2024
SphI GCATGC 2 cut(s) 721, 1561
SseBI AGGCCT 1 cut(s) 1451
SsiI CCGC 1 cut(s) 1378
SspI AATATT 2 cut(s) 706, 2652
SspMI CTAG 9 cut(s) 6, 1121, 1185, 1289, 1554, 1796, 1812, 2006, 2385
StuI AGGCCT 1 cut(s) 1451
StyD4I CCNGG 3 cut(s) 512, 943, 2187
StyI CCWWGG 2 cut(s) 2041, 2234
TaaI ACNGT 5 cut(s) 42, 774, 1142, 1770, 2456
TaqI TCGA 6 cut(s) 263, 420, 776, 1745, 2073, 2163
TaqII GACCGA 1 cut(s) 2424
TfiI GAWTC 9 cut(s) 386, 466, 1205, 1456, 1742, 1862, 2051, 2160, 2165
TscAI CASTG 4 cut(s) 157, 1145, 1330, 2362
TseFI GTSAC 1 cut(s) 2090
TseI GCWGC 5 cut(s) 339, 367, 530, 721, 2667
Tsp45I GTSAC 1 cut(s) 2090
TspGWI ACGGA 3 cut(s) 548, 799, 2384
TspRI CASTG 4 cut(s) 157, 1145, 1330, 2362
Van91I CCANNNNNTGG 2 cut(s) 2047, 2293
Vha464I CTTAAG 1 cut(s) 814
VneI GTGCAC 2 cut(s) 1136, 2060
VpaK11BI GGWCC 2 cut(s) 71, 155
VspI ATTAAT 3 cut(s) 897, 1077, 1974
XapI RAATTY 8 cut(s) 161, 801, 1055, 1318, 1513, 2075, 2641, 2658
XceI RCATGY 5 cut(s) 721, 758, 1161, 1561, 2636
XcmI CCANNNNNNNNNTGG 1 cut(s) 1355
XmiI GTMKAC 1 cut(s) 672
XmnI GAANNNNTTC 6 cut(s) 596, 952, 1275, 1995, 2050, 2164
XspI CTAG 9 cut(s) 6, 1121, 1185, 1289, 1554, 1796, 1812, 2006, 2385
Zsp2I ATGCAT 2 cut(s) 1068, 1168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.