Rh6BG171700

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000400
Physical Location & Seq
Reverse (-)
28379010 .. 28380452
1443 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG171700.1

Sequence Viewer

Length: 1443 bp
ATGAAGGAAAATCTTGAGTCGGTAGGATTACATTGGGGATCCCAACCTCTGGATCAATCATTTCCGAGACTATTAGGTAAATCCCGACGTGATGTAGTCATCTCCAGCTCTCATGTAGCGCTACAGCTGTGTAAACGTGCGGAAGAAGTTCTTGACGGTCTGCAGCCACACAATAATCTGAAAAAGTTAGTTATAAATGGCTATCCGGGAATTAGATTTGCTGATTGGGCTCTCCCAAAAATGCTGATTGAAGTTAATTTGATCAACTGTACAAACTGTCAACATCTTCCAGCCCTTGGGAATCTTCCGCTGCTCAAGACACTCTATATTCATGGAATGGATGGCGTCAAGTGCATTGGTGCGGAGTTCTATGGTGACGGTACTGAGGTAAGGTTTCCATCTCTGGAAGAACTATCTCTCAGTCATTTTCCAAATTTGGAACAATGGTCATGTGCAGATGATGGAAATGCATTTCCTCATTTGAGCAATTTAACAGTTAGAAGCTGCCCCAAGTTACAACAGATATCAGTATCTCAGTCTCTTCAACATTTGGAGCTACGGGATTGCAATCCAACATTGATGTGCATAGAAAATTTAACTTTGCTTTCTGTGCTTGTAATAGATCAAATTCCAGAGCTAACCTCTCTCCCAGAAGGGCTTTTTGTGTCAGCTCGCCTGTCTTCTTTGGAGATCTTGTCATGTCCTAAGCTTCGTTCACTGCCTTTGAAGATGGGAAACCTCACTGCTCTGAAATCATTGACCATTCGATGGTGTGAAGGGCTATCCACCCTACCCCAGAGTATAGAGGACCTCAAAGCTCTGGAGTCACTGGAGATTAGTAACTGTAATAATATAATCTCCATGCCGGATGGTGGAATTGCAGGTCTGAGTTCCCTTCGAACTTTGTCTATTGAAAACTGCAATAGTCTGATTTCTTTGTCATCGAGTTTGGAGAATCTCACATTCCTTGAGCACTTGGTCATTATGTATTGTCCAAATCTTACTTCTTTCCCAGAGGGCGCGCAATCTCTCTCTGCCCTACGAAGTTTGACTATCTTGAGTTGTCCTTGGTTTGATTCTCTACCAAATGAATTGCAAAATCTCAGGACGCTACGGCGCCTGGAAATTGGTGGCTGCCCCAATCTAACTGCTTTGCCAGACTGGTTTGAGAAACTGGATTCTCTCCGATCCTTGATCATTTGCGATTGTCCCAATTTAATAGTACTGCCGCCCTGTCTAACGCTTCTCACTAAACTCCAGCATCTCTCCATTCAAGATTGTCATAAGCTCGAAGAAAGATGTAGAAAGGGAAGTGGTGAGGATTGGTTCAAAATAGCCCATGTCCCACATCGATACATTGGTTCACGTCAGCTTCAGCCTCAGGTCAGGTCGTTCATCAGCCAAGAAGCAAGCACATCGTTCTCCGCCTCCTATTTTACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

480

Amino Acids

53.42

Weight (kDa)

5.93

Isoelectric Point (pI)

62.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_R13L1-DRL21 PF25019 2 - 113 8.3e-20 R13L1/DRL21 LRRs
LRR_14 PF23598 261 - 425 2e-13 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 194
Acc36I ACCTGC 1 cut(s) 872
AccB1I GGYRCC 1 cut(s) 1116
AccB7I CCANNNNNTGG 3 cut(s) 49, 296, 768
AccII CGCG 1 cut(s) 1022
AciI CCGC 5 cut(s) 140, 308, 362, 1229, 1425
AclWI GGATC 4 cut(s) 33, 46, 60, 1182
AcsI RAATTY 3 cut(s) 433, 592, 627
AcuI CTGAAG 1 cut(s) 1358
AcyI GRCGYC 2 cut(s) 345, 1117
AfaI GTAC 3 cut(s) 271, 382, 1224
AfeI AGCGCT 1 cut(s) 120
AfiI CCNNNNNNNGG 4 cut(s) 49, 296, 768, 872
AgsI TTSAA 6 cut(s) 251, 545, 727, 914, 1274, 1330
AjiI CACGTC 2 cut(s) 89, 1367
AjnI CCWGG 1 cut(s) 1119
AjuI GAANNNNNNNTTGG 2 cut(s) 988, 1020
Alw21I GWGCWC 1 cut(s) 975
Alw26I GTCTC 2 cut(s) 61, 543
AlwI GGATC 4 cut(s) 33, 46, 60, 1182
Aor51HI AGCGCT 1 cut(s) 120
ApeKI GCWGC 4 cut(s) 163, 310, 504, 1134
ApoI RAATTY 3 cut(s) 433, 592, 627
Asp700I GAANNNNTTC 1 cut(s) 147
AspLEI GCGC 4 cut(s) 121, 1022, 1024, 1119
AspS9I GGNCC 1 cut(s) 808
AsuC2I CCSGG 1 cut(s) 207
AsuHPI GGTGA 2 cut(s) 386, 1328
AsuII TTCGAA 1 cut(s) 898
AvaII GGWCC 1 cut(s) 808
AxyI CCTNAGG 1 cut(s) 1380
BaeI ACNNNNGTAYC 4 cut(s) 372, 405, 1345, 1378
BamHI GGATCC 1 cut(s) 38
BanI GGYRCC 1 cut(s) 1116
BanII GRGCYC 1 cut(s) 232
BbsI GAAGAC 1 cut(s) 672
Bbv12I GWGCWC 1 cut(s) 975
BbvI GCAGC 4 cut(s) 175, 297, 491, 1121
BccI CCATC 6 cut(s) 335, 406, 455, 724, 762, 863
BceAI ACGGC 1 cut(s) 1130
BcgI CGANNNNNNTGC 2 cut(s) 1398, 1432
BciT130I CCWGG 1 cut(s) 1121
BclI TGATCA 2 cut(s) 261, 1194
BcnI CCSGG 1 cut(s) 207
BcoDI GTCTC 2 cut(s) 61, 543
BfmI CTRYAG 2 cut(s) 122, 161
BfoI RGCGCY 2 cut(s) 122, 1120
BfuAI ACCTGC 1 cut(s) 872
BglII AGATCT 1 cut(s) 690
BisI GCNGC 5 cut(s) 164, 311, 505, 1135, 1229
BlsI GCNGC 5 cut(s) 165, 312, 506, 1136, 1230
BmcAI AGTACT 1 cut(s) 1224
Bme1390I CCNGG 2 cut(s) 207, 1121
Bme18I GGWCC 1 cut(s) 808
BmgBI CACGTC 2 cut(s) 89, 1367
BmgT120I GGNCC 1 cut(s) 808
BmiI GGNNCC 2 cut(s) 40, 1118
BmrFI CCNGG 2 cut(s) 207, 1121
BmsI GCATC 1 cut(s) 1270
BpiI GAAGAC 1 cut(s) 672
BplI GAGNNNNNCTC 2 cut(s) 626, 658
BpmI CTGGAG 4 cut(s) 88, 842, 851, 1241
Bpu10I CCTNAGC 1 cut(s) 705
Bpu14I TTCGAA 1 cut(s) 898
BpuEI CTTGAG 4 cut(s) 35, 299, 989, 1078
BpuMI CCSGG 1 cut(s) 207
Bsa29I ATCGAT 1 cut(s) 1351
BsaAI YACGTR 1 cut(s) 1440
BsaBI GATNNNNATC 1 cut(s) 567
BsaHI GRCGYC 2 cut(s) 345, 1117
BsaJI CCNNGG 2 cut(s) 295, 1067
BsaXI ACNNNNNCTCC 2 cut(s) 680, 710
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 296, 768, 872
Bse1I ACTGG 3 cut(s) 834, 1166, 1179
Bse21I CCTNAGG 1 cut(s) 1380
Bse8I GATNNNNATC 1 cut(s) 567
BseBI CCWGG 1 cut(s) 1121
BseCI ATCGAT 1 cut(s) 1351
BseDI CCNNGG 2 cut(s) 295, 1067
BseGI GGATG 2 cut(s) 346, 874
BseJI GATNNNNATC 1 cut(s) 567
BseLI CCNNNNNNNGG 4 cut(s) 49, 296, 768, 872
BseMII CTCAG 6 cut(s) 375, 433, 548, 878, 1117, 1394
BseNI ACTGG 3 cut(s) 834, 1166, 1179
BsePI GCGCGC 1 cut(s) 1020
BseXI GCAGC 4 cut(s) 175, 297, 491, 1121
BsgI GTGCAG 1 cut(s) 474
Bsh1236I CGCG 1 cut(s) 1022
BshNI GGYRCC 1 cut(s) 1116
BshVI ATCGAT 1 cut(s) 1351
BsiHKAI GWGCWC 1 cut(s) 975
BsiSI CCGG 2 cut(s) 206, 866
BslFI GGGAC 2 cut(s) 1194, 1328
BslI CCNNNNNNNGG 4 cut(s) 49, 296, 768, 872
BsmAI GTCTC 2 cut(s) 61, 543
BsmFI GGGAC 2 cut(s) 1194, 1328
Bsp119I TTCGAA 1 cut(s) 898
Bsp1286I GDGCHC 2 cut(s) 232, 975
Bsp1407I TGTACA 1 cut(s) 269
Bsp143I GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
BspACI CCGC 5 cut(s) 140, 308, 362, 1229, 1425
BspCNI CTCAG 6 cut(s) 376, 432, 547, 879, 1116, 1393
BspDI ATCGAT 1 cut(s) 1351
BspFNI CGCG 1 cut(s) 1022
BspLI GGNNCC 2 cut(s) 40, 1118
BspMAI CTGCAG 1 cut(s) 165
BspMI ACCTGC 1 cut(s) 872
BspPI GGATC 4 cut(s) 33, 46, 60, 1182
BspT104I TTCGAA 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 1116
BsrGI TGTACA 1 cut(s) 269
BsrI ACTGG 3 cut(s) 834, 1166, 1179
BssECI CCNNGG 2 cut(s) 295, 1067
BssHII GCGCGC 1 cut(s) 1020
BssMI GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
BssNI GRCGYC 2 cut(s) 345, 1117
BssT1I CCWWGG 2 cut(s) 295, 1067
Bst2UI CCWGG 1 cut(s) 1121
Bst4CI ACNGT 6 cut(s) 158, 269, 278, 380, 496, 845
Bst6I CTCTTC 1 cut(s) 546
BstACI GRCGYC 2 cut(s) 345, 1117
BstAUI TGTACA 1 cut(s) 269
BstBAI YACGTR 1 cut(s) 1440
BstBI TTCGAA 1 cut(s) 898
BstC8I GCNNGC 3 cut(s) 673, 1022, 1411
BstDEI CTNAG 7 cut(s) 384, 419, 534, 705, 887, 1103, 1380
BstF5I GGATG 2 cut(s) 346, 874
BstFNI CGCG 1 cut(s) 1022
BstH2I RGCGCY 2 cut(s) 122, 1120
BstHHI GCGC 4 cut(s) 121, 1022, 1024, 1119
BstKTI GATC 7 cut(s) 41, 55, 264, 625, 693, 1190, 1197
BstMAI GTCTC 2 cut(s) 61, 543
BstMBI GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
BstMWI GCNNNNNNNGC 3 cut(s) 227, 351, 610
BstNI CCWGG 1 cut(s) 1121
BstSCI CCNGG 2 cut(s) 205, 1119
BstSFI CTRYAG 2 cut(s) 122, 161
BstSNI TACGTA 1 cut(s) 1440
BstUI CGCG 1 cut(s) 1022
BstV1I GCAGC 4 cut(s) 175, 297, 491, 1121
BstV2I GAAGAC 1 cut(s) 672
BstX2I RGATCY 2 cut(s) 38, 690
BstYI RGATCY 2 cut(s) 38, 690
Bsu15I ATCGAT 1 cut(s) 1351
Bsu36I CCTNAGG 1 cut(s) 1380
BsuTUI ATCGAT 1 cut(s) 1351
BtrI CACGTC 2 cut(s) 89, 1367
BtsCI GGATG 2 cut(s) 346, 874
BtsI GCAGTG 2 cut(s) 716, 741
BtsIMutI CAGTG 3 cut(s) 716, 741, 827
BveI ACCTGC 1 cut(s) 872
Cac8I GCNNGC 3 cut(s) 673, 1022, 1411
CfoI GCGC 4 cut(s) 121, 1022, 1024, 1119
Cfr13I GGNCC 1 cut(s) 808
ClaI ATCGAT 1 cut(s) 1351
CseI GACGC 2 cut(s) 334, 1117
Csp6I GTAC 3 cut(s) 270, 381, 1223
CviAII CATG 6 cut(s) 113, 332, 450, 699, 862, 1340
CviQI GTAC 3 cut(s) 270, 381, 1223
DdeI CTNAG 7 cut(s) 384, 419, 534, 705, 887, 1103, 1380
DinI GGCGCC 1 cut(s) 1118
DpnI GATC 7 cut(s) 40, 54, 263, 624, 692, 1189, 1196
DpnII GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
Eam1104I CTCTTC 1 cut(s) 546
EarI CTCTTC 1 cut(s) 546
EciI GGCGGA 1 cut(s) 1414
Eco105I TACGTA 1 cut(s) 1440
Eco130I CCWWGG 2 cut(s) 295, 1067
Eco24I GRGCYC 1 cut(s) 232
Eco32I GATATC 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 808
Eco47III AGCGCT 1 cut(s) 120
Eco57I CTGAAG 1 cut(s) 1358
Eco81I CCTNAGG 1 cut(s) 1380
EcoO109I RGGNCCY 1 cut(s) 808
EcoRII CCWGG 1 cut(s) 1119
EcoRV GATATC 1 cut(s) 525
EcoT14I CCWWGG 2 cut(s) 295, 1067
EcoT22I ATGCAT 1 cut(s) 472
EcoT38I GRGCYC 1 cut(s) 232
EgeI GGCGCC 1 cut(s) 1118
EheI GGCGCC 1 cut(s) 1118
ErhI CCWWGG 2 cut(s) 295, 1067
FaeI CATG 6 cut(s) 116, 335, 453, 702, 865, 1343
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FaqI GGGAC 2 cut(s) 1194, 1328
FatI CATG 6 cut(s) 112, 331, 449, 698, 861, 1339
FbaI TGATCA 2 cut(s) 261, 1194
Fnu4HI GCNGC 5 cut(s) 164, 311, 505, 1135, 1229
FokI GGATG 2 cut(s) 353, 881
FriOI GRGCYC 1 cut(s) 232
Fsp4HI GCNGC 5 cut(s) 164, 311, 505, 1135, 1229
GlaI GCGC 4 cut(s) 120, 1021, 1023, 1118
GluI GCNGC 5 cut(s) 164, 311, 505, 1135, 1229
GsuI CTGGAG 4 cut(s) 88, 842, 851, 1241
HaeII RGCGCY 2 cut(s) 122, 1120
HapII CCGG 2 cut(s) 206, 866
HgaI GACGC 2 cut(s) 334, 1117
HhaI GCGC 4 cut(s) 121, 1022, 1024, 1119
Hin1I GRCGYC 2 cut(s) 345, 1117
Hin1II CATG 6 cut(s) 116, 335, 453, 702, 865, 1343
Hin6I GCGC 4 cut(s) 119, 1020, 1022, 1117
HinP1I GCGC 4 cut(s) 119, 1020, 1022, 1117
HincII GTYRAC 1 cut(s) 281
HindII GTYRAC 1 cut(s) 281
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 6 cut(s) 17, 301, 824, 955, 1076, 1178
HpaII CCGG 2 cut(s) 206, 866
HphI GGTGA 2 cut(s) 386, 1328
Hpy166II GTNNAC 4 cut(s) 134, 281, 716, 1364
Hpy188I TCNGA 6 cut(s) 66, 180, 750, 888, 930, 1187
Hpy8I GTNNAC 4 cut(s) 134, 281, 716, 1364
Hpy99I CGWCG 1 cut(s) 90
HpyAV CCTTC 3 cut(s) 647, 770, 905
HpyCH4III ACNGT 6 cut(s) 158, 269, 278, 380, 496, 845
HpyCH4IV ACGT 4 cut(s) 88, 136, 1366, 1439
HpyCH4V TGCA 9 cut(s) 163, 354, 455, 470, 567, 585, 881, 921, 1096
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 351, 610
HpyF3I CTNAG 7 cut(s) 384, 419, 534, 705, 887, 1103, 1380
HpySE526I ACGT 4 cut(s) 88, 136, 1366, 1439
Hsp92I GRCGYC 2 cut(s) 345, 1117
Hsp92II CATG 6 cut(s) 116, 335, 453, 702, 865, 1343
HspAI GCGC 4 cut(s) 119, 1020, 1022, 1117
KasI GGCGCC 1 cut(s) 1116
Ksp22I TGATCA 2 cut(s) 261, 1194
Kzo9I GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
LmnI GCTCC 1 cut(s) 553
Lsp1109I GCAGC 4 cut(s) 175, 297, 491, 1121
LweI GCATC 1 cut(s) 1270
MaeII ACGT 4 cut(s) 88, 136, 1366, 1439
MaeIII GTNAC 4 cut(s) 374, 513, 825, 839
MalI GATC 7 cut(s) 40, 54, 263, 624, 692, 1189, 1196
MboI GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
MboII GAAGA 8 cut(s) 155, 278, 296, 419, 533, 672, 739, 1304
MflI RGATCY 2 cut(s) 38, 690
MhlI GDGCHC 2 cut(s) 232, 975
Mly113I GGCGCC 1 cut(s) 1117
MlyI GAGTC 2 cut(s) 26, 833
MmeI TCCRAC 1 cut(s) 596
Mph1103I ATGCAT 1 cut(s) 472
MroXI GAANNNNTTC 1 cut(s) 147
MseI TTAA 4 cut(s) 255, 491, 596, 1217
MslI CAYNNNNRTG 1 cut(s) 580
MspA1I CMGCKG 2 cut(s) 127, 310
MspI CCGG 2 cut(s) 206, 866
MspR9I CCNGG 2 cut(s) 207, 1121
MvaI CCWGG 1 cut(s) 1121
MvnI CGCG 1 cut(s) 1022
MwoI GCNNNNNNNGC 3 cut(s) 227, 351, 610
NarI GGCGCC 1 cut(s) 1117
NciI CCSGG 1 cut(s) 207
NdeII GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
NlaIII CATG 6 cut(s) 116, 335, 453, 702, 865, 1343
NlaIV GGNNCC 2 cut(s) 40, 1118
NmuCI GTSAC 2 cut(s) 374, 825
NsiI ATGCAT 1 cut(s) 472
NspV TTCGAA 1 cut(s) 898
PauI GCGCGC 1 cut(s) 1020
PdmI GAANNNNTTC 1 cut(s) 147
PfeI GAWTC 4 cut(s) 301, 955, 1076, 1178
PflMI CCANNNNNTGG 3 cut(s) 49, 296, 768
PfoI TCCNGGA 1 cut(s) 205
PkrI GCNGC 5 cut(s) 165, 312, 506, 1136, 1230
PleI GAGTC 2 cut(s) 25, 832
PluTI GGCGCC 1 cut(s) 1120
PpsI GAGTC 2 cut(s) 25, 832
Ppu21I YACGTR 1 cut(s) 1440
PpuMI RGGWCCY 1 cut(s) 808
PsiI TTATAA 1 cut(s) 194
Psp5II RGGWCCY 1 cut(s) 808
Psp6I CCWGG 1 cut(s) 1119
PspGI CCWGG 1 cut(s) 1119
PspN4I GGNNCC 2 cut(s) 40, 1118
PspPI GGNCC 1 cut(s) 808
PspPPI RGGWCCY 1 cut(s) 808
PstI CTGCAG 1 cut(s) 165
PsuI RGATCY 2 cut(s) 38, 690
PteI GCGCGC 1 cut(s) 1020
PvuII CAGCTG 1 cut(s) 127
RsaI GTAC 3 cut(s) 271, 382, 1224
RsaNI GTAC 3 cut(s) 270, 381, 1223
RseI CAYNNNNRTG 1 cut(s) 580
SaqAI TTAA 4 cut(s) 255, 491, 596, 1217
SatI GCNGC 5 cut(s) 164, 311, 505, 1135, 1229
Sau3AI GATC 7 cut(s) 38, 52, 261, 622, 690, 1187, 1194
Sau96I GGNCC 1 cut(s) 808
ScaI AGTACT 1 cut(s) 1224
SchI GAGTC 2 cut(s) 26, 833
ScrFI CCNGG 2 cut(s) 207, 1121
SduI GDGCHC 2 cut(s) 232, 975
SfaNI GCATC 1 cut(s) 1270
SfcI CTRYAG 2 cut(s) 122, 161
SfoI GGCGCC 1 cut(s) 1118
SfuI TTCGAA 1 cut(s) 898
SinI GGWCC 1 cut(s) 808
SmiMI CAYNNNNRTG 1 cut(s) 580
SmlI CTYRAG 4 cut(s) 14, 314, 968, 1057
SmoI CTYRAG 4 cut(s) 14, 314, 968, 1057
SnaBI TACGTA 1 cut(s) 1440
SsiI CCGC 5 cut(s) 140, 308, 362, 1229, 1425
SspDI GGCGCC 1 cut(s) 1116
StyD4I CCNGG 2 cut(s) 205, 1119
StyI CCWWGG 2 cut(s) 295, 1067
TaaI ACNGT 6 cut(s) 158, 269, 278, 380, 496, 845
TaiI ACGT 4 cut(s) 91, 139, 1369, 1442
TaqI TCGA 5 cut(s) 766, 898, 944, 1290, 1351
TatI WGTACW 2 cut(s) 269, 1222
TauI GCSGC 1 cut(s) 1231
TfiI GAWTC 4 cut(s) 301, 955, 1076, 1178
Tru1I TTAA 4 cut(s) 255, 491, 596, 1217
Tru9I TTAA 4 cut(s) 255, 491, 596, 1217
TscAI CASTG 3 cut(s) 723, 748, 834
TseFI GTSAC 2 cut(s) 374, 825
TseI GCWGC 4 cut(s) 163, 310, 504, 1134
Tsp45I GTSAC 2 cut(s) 374, 825
TspDTI ATGAA 4 cut(s) 17, 320, 1104, 1384
TspRI CASTG 3 cut(s) 723, 748, 834
Van91I CCANNNNNTGG 3 cut(s) 49, 296, 768
VpaK11BI GGWCC 1 cut(s) 808
XapI RAATTY 3 cut(s) 433, 592, 627
XmnI GAANNNNTTC 1 cut(s) 147
ZrmI AGTACT 1 cut(s) 1224
Zsp2I ATGCAT 1 cut(s) 472
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.