Rh1BG179500

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000400
Physical Location & Seq
Reverse (-)
28665184 .. 28668765
3582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG179500.1

Sequence Viewer

Length: 2133 bp
ATGGCAGACGTAGTTTTATCACCAGCTTTGCAAGTGATCTTTGACAGAGTAGCATCCCCAGTCCTACAAAAGCTTGCTGATATCTGGGACATGAAGGACAACCTCCAGAGCCTACAACATGCCTTGGTCATGGTTCAAGCTATCCTTGAAGATGCAGAGGAGCAACAACTGACCAACAAAGCCGTCTGGCTTTGGCTGTTGAAGCTCAAGAACGCTGCTCATGATGCTGATGACCTTCTGGATTTCGTTACGGCCAAAGGAAGAACTATGAGTCCTGGAAAAGGTGGGTTGATATGTTTGAGGTATCTCGACTTGTCTTATACACCTATCTCCAAGTTGCCGGCAACCACAAGGAATCTCTGTTCATTGCAGACTTTAAACCTCTCTGGATGTCATAATCTTAGAGTCTTGCCAGACTTCGAAGTAATGACCGGTCTAAGACATCTCAATATAGCTGGATGTGATAGCTTGATTGCTCTACCTTCTGGTATTAAAAGGTTACTTCAACTTCAGACACTGCCATTATATTTCGTTCGCAAGAATCCCGGTAATCTTGGTGCACTAGAGAATTTGAATCTTTATGGGGAGTTGAATATTACACACTTGGAGAATGTAAGAAATGCAACTGGAGCTCAATCATCTGGACTGAAGATGAAAGAAAATATTGAGTCGTTGGGATTATATTGGGGAGATTTTGAAGATGTGAACGATAGGAATAAATCATTGAAGAAACTAGCCAAGTCCCCAGCCAAAAGGTTTTTTTTAGAAGCAGGGGTACGGTGGCATGAACCTGGAAGCCTGGTACATGCTGAAAAGGCGGTAGAAATTCTTGATGGCCTGAAACCACACAAGAATTTGAAAAAGCTAGATATACATGGTTATCCAGGAATCAGATTTCCAGATTGGACTCTCCCAAATCTAATTGCAGTTGATTTGTCCAATTGTAAGATCTGTGAATATCTTCCGGCCCTTGGGAATCTTCTTCTACTCAAGACTCTTTCTCTGCATGGAATGGAGAGCGTGAAGCGCATTGGCTTTGAGTTCTATGGTGATAGTACAGACATATACTTTTCAGCACTTGAAGAACTATTGCTCAGTGATTTTCCGAACTTGGAAGCCTGGTCGAGTGCAAATAATGAAAATGCATTTCCGAGCTTGAGGAAATTAACCATAAATAGGTGTCCCAAGTTGACACATATACCATATTGTTTGTCTCTTCAACATTTGGAGCTGCGGGATTGTAATCCATCTTCAATCTTCAGTGGAGGTTTAACTTTGCTGACAGTGCTTGTAATAGAAAAACTTCCAGAGCTGCACTCTCTACCACAAGGGCTTTCTGCATCAGCTAGTCTGTCTTCTCTGGAGGTCTTGTCTTGCCCCAAGCTTTGTTCACTGCCTTTGGAGATGGGAAACCTCACTGCACTGAAATCTTTGACCATTCGTTGGTGTGATGAGTTGTCCTTTCTGCCACAGAGTTTGCAGAACCTCAAAGCTCTGGAGTCACTAGAGATTAGTGACTGTCATAGTATAATCTCGATGCCAGATGGTGCAATTGGAGGTTTGAGTTCCCTTCAAACTTTGTCCATTGAGAACTGCAGTAATCTGACTTCTTTGTCATCGAGTTTGGAACAACTCGCTTTCCTTGAGCGGTTCACCATTATGTACTGTCCAAACCTTGGTTCTTTCCCAGAGGGTGTGCAACACCTCTCAGCCCTTCGAAGTTTGTCTATCTTGAGCTGTCCTTGGTTTGATTCTCTGCCAGAAGGGTTACAAAATGTCAAGACGTTGCAATGTTTGGAAATTATTAGTTGCCCGAATCTAACAGCTTTGCCAGAGTGGGTTGAGAAGCTTGCTTCACTCAGATCTTTGACCATCTTTGATTGTCCTAATTTGAAACTGTTGGCACAAAGTCTAAAACTTCTCACCAAACTCCAGCACCTCTCTATTCAAGAATGTCCCGAGCTTGAGGAAAGATGTAGACAAGGCAGTGGTGAGGATTGGCTGAAAATAGCTCATGTTCCACATAAGTACATTGGATCACTGGAGATGAGGCGGTCCAGTAGTGAAGCAAGTACATCAGGCAGCTCTTCTGTTGAAACATCTGTACAGCAAGCAACTGCTTCATCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

710

Amino Acids

78.43

Weight (kDa)

5.88

Isoelectric Point (pI)

56.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 86 1.8e-16 Rx N-terminal domain
LRR_14 PF23598 96 - 393 2e-16 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 186 - 338 8e-26 R13L1/DRL21 LRRs
LRR_14 PF23598 406 - 547 2e-07 Leucine-rich repeat region
LRR_14 PF23598 558 - 652 1.5e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1612
AccB7I CCANNNNNTGG 2 cut(s) 1443, 1676
AccBSI CCGCTC 1 cut(s) 1648
AccI GTMKAC 1 cut(s) 1978
AciI CCGC 4 cut(s) 818, 1234, 1648, 2053
AclWI GGATC 1 cut(s) 2044
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 3 cut(s) 568, 825, 853
AcuI CTGAAG 3 cut(s) 494, 668, 1243
AfaI GTAC 7 cut(s) 777, 804, 1057, 1664, 2030, 2074, 2106
AfiI CCNNNNNNNGG 5 cut(s) 281, 971, 1176, 1443, 1676
AgeI ACCGGT 1 cut(s) 431
AjnI CCWGG 5 cut(s) 274, 790, 798, 883, 1118
AjuI GAANNNNNNNTTGG 2 cut(s) 1663, 1695
AloI GAACNNNNNNTCC 4 cut(s) 256, 288, 346, 378
Alw21I GWGCWC 2 cut(s) 562, 634
Alw26I GTCTC 1 cut(s) 1218
Alw44I GTGCAC 1 cut(s) 558
AlwI GGATC 1 cut(s) 2044
AlwNI CAGNNNCTG 1 cut(s) 517
Ama87I CYCGRG 1 cut(s) 1958
AoxI GGCC 3 cut(s) 252, 835, 966
ApaLI GTGCAC 1 cut(s) 558
ApeKI GCWGC 4 cut(s) 215, 1231, 1312, 2082
ApoI RAATTY 3 cut(s) 568, 825, 853
AsiGI ACCGGT 1 cut(s) 431
Asp700I GAANNNNTTC 2 cut(s) 960, 1302
AspLEI GCGC 1 cut(s) 1029
AspS9I GGNCC 2 cut(s) 967, 2055
AsuC2I CCSGG 1 cut(s) 546
AsuHPI GGTGA 5 cut(s) 12, 1061, 1645, 1915, 2003
AsuII TTCGAA 2 cut(s) 420, 1717
AvaI CYCGRG 1 cut(s) 1958
AvaII GGWCC 1 cut(s) 2055
BaeGI GKGCMC 1 cut(s) 562
BanII GRGCYC 1 cut(s) 634
BarI GAAGNNNNNNTAC 6 cut(s) 759, 791, 1234, 1266, 1591, 1623
BbsI GAAGAC 1 cut(s) 1347
Bbv12I GWGCWC 2 cut(s) 562, 634
BbvI GCAGC 4 cut(s) 202, 1218, 1299, 2094
BccI CCATC 5 cut(s) 827, 1255, 1399, 1538, 1880
BceAI ACGGC 2 cut(s) 167, 267
BciT130I CCWGG 5 cut(s) 276, 792, 800, 885, 1120
BcnI CCSGG 1 cut(s) 546
BcoDI GTCTC 1 cut(s) 1218
BfaI CTAG 5 cut(s) 563, 734, 866, 1347, 1505
BfmI CTRYAG 1 cut(s) 1594
BglII AGATCT 2 cut(s) 948, 1862
BisI GCNGC 4 cut(s) 216, 1232, 1313, 2083
BlsI GCNGC 4 cut(s) 217, 1233, 1314, 2084
Bme1390I CCNGG 6 cut(s) 276, 546, 792, 800, 885, 1120
Bme18I GGWCC 1 cut(s) 2055
BmeT110I CYCGRG 1 cut(s) 1958
BmgT120I GGNCC 2 cut(s) 967, 2055
BmrFI CCNGG 6 cut(s) 276, 546, 792, 800, 885, 1120
BmrI ACTGGG 1 cut(s) 53
BmsI GCATC 5 cut(s) 62, 142, 214, 1349, 1527
BmuI ACTGGG 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 1347
BplI GAGNNNNNCTC 2 cut(s) 1301, 1333
BpmI CTGGAG 6 cut(s) 89, 648, 1382, 1517, 1916, 2063
Bpu14I TTCGAA 2 cut(s) 420, 1717
BpuEI CTTGAG 6 cut(s) 191, 974, 1177, 1664, 1753, 1985
BpuMI CCSGG 1 cut(s) 546
BsaBI GATNNNNATC 1 cut(s) 1242
BsaJI CCNNGG 4 cut(s) 123, 970, 1675, 1742
BsaWI WCCGGW 1 cut(s) 431
BsaXI ACNNNNNCTCC 2 cut(s) 1355, 1385
Bsc4I CCNNNNNNNGG 5 cut(s) 281, 971, 1176, 1443, 1676
Bse118I RCCGGY 2 cut(s) 340, 431
Bse1I ACTGG 4 cut(s) 59, 631, 2046, 2058
Bse3DI GCAATG 2 cut(s) 365, 1796
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 5 cut(s) 276, 792, 800, 885, 1120
BseDI CCNNGG 4 cut(s) 123, 970, 1675, 1742
BseGI GGATG 3 cut(s) 53, 395, 464
BseJI GATNNNNATC 1 cut(s) 1242
BseLI CCNNNNNNNGG 5 cut(s) 281, 971, 1176, 1443, 1676
BseMI GCAATG 2 cut(s) 365, 1796
BseMII CTCAG 3 cut(s) 1108, 1722, 1873
BseNI ACTGG 4 cut(s) 59, 631, 2046, 2058
BseRI GAGGAG 1 cut(s) 173
BseSI GKGCMC 1 cut(s) 562
BseXI GCAGC 4 cut(s) 202, 1218, 1299, 2094
BseYI CCCAGC 1 cut(s) 745
BsgI GTGCAG 2 cut(s) 1298, 1404
BshFI GGCC 3 cut(s) 254, 837, 968
BshTI ACCGGT 1 cut(s) 431
BsiHKAI GWGCWC 2 cut(s) 562, 634
BsiHKCI CYCGRG 1 cut(s) 1958
BsiSI CCGG 4 cut(s) 341, 432, 546, 965
BslFI GGGAC 4 cut(s) 101, 727, 1167, 1941
BslI CCNNNNNNNGG 5 cut(s) 281, 971, 1176, 1443, 1676
BsmAI GTCTC 1 cut(s) 1218
BsmFI GGGAC 4 cut(s) 101, 727, 1167, 1941
BsnI GGCC 3 cut(s) 254, 837, 968
BsoBI CYCGRG 1 cut(s) 1958
Bsp119I TTCGAA 2 cut(s) 420, 1717
Bsp1286I GDGCHC 2 cut(s) 562, 634
Bsp1407I TGTACA 1 cut(s) 2104
Bsp143I GATC 4 cut(s) 36, 948, 1862, 2036
BspACI CCGC 4 cut(s) 818, 1234, 1648, 2053
BspANI GGCC 3 cut(s) 254, 837, 968
BspCNI CTCAG 3 cut(s) 1107, 1721, 1872
BspHI TCATGA 2 cut(s) 220, 2129
BspMAI CTGCAG 1 cut(s) 1598
BspPI GGATC 1 cut(s) 2044
BspQI GCTCTTC 1 cut(s) 2092
BspT104I TTCGAA 2 cut(s) 420, 1717
BsrBI CCGCTC 1 cut(s) 1648
BsrDI GCAATG 2 cut(s) 365, 1796
BsrFI RCCGGY 2 cut(s) 340, 431
BsrGI TGTACA 1 cut(s) 2104
BsrI ACTGG 4 cut(s) 59, 631, 2046, 2058
BssAI RCCGGY 2 cut(s) 340, 431
BssECI CCNNGG 4 cut(s) 123, 970, 1675, 1742
BssMI GATC 4 cut(s) 36, 948, 1862, 2036
BssT1I CCWWGG 4 cut(s) 123, 970, 1675, 1742
Bst2UI CCWGG 5 cut(s) 276, 792, 800, 885, 1120
Bst4CI ACNGT 5 cut(s) 780, 1285, 1520, 1667, 1899
Bst6I CTCTTC 2 cut(s) 1221, 2092
BstAUI TGTACA 1 cut(s) 2104
BstBI TTCGAA 2 cut(s) 420, 1717
BstC8I GCNNGC 4 cut(s) 75, 342, 1851, 2112
BstDEI CTNAG 5 cut(s) 401, 437, 1094, 1708, 1859
BstENI CCTNNNNNAGG 1 cut(s) 279
BstF5I GGATG 3 cut(s) 53, 395, 464
BstHHI GCGC 1 cut(s) 1029
BstKTI GATC 4 cut(s) 39, 951, 1865, 2039
BstMAI GTCTC 1 cut(s) 1218
BstMBI GATC 4 cut(s) 36, 948, 1862, 2036
BstMWI GCNNNNNNNGC 6 cut(s) 202, 224, 629, 815, 1026, 1285
BstNI CCWGG 5 cut(s) 276, 792, 800, 885, 1120
BstNSI RCATGY 2 cut(s) 122, 809
BstSCI CCNGG 6 cut(s) 274, 544, 790, 798, 883, 1118
BstSFI CTRYAG 1 cut(s) 1594
BstSLI GKGCMC 1 cut(s) 562
BstV1I GCAGC 4 cut(s) 202, 1218, 1299, 2094
BstV2I GAAGAC 1 cut(s) 1347
BstX2I RGATCY 2 cut(s) 948, 1862
BstYI RGATCY 2 cut(s) 948, 1862
BsuRI GGCC 3 cut(s) 254, 837, 968
BtsCI GGATG 3 cut(s) 53, 395, 464
BtsI GCAGTG 4 cut(s) 515, 1391, 1416, 1993
BtsIMutI CAGTG 9 cut(s) 515, 1102, 1267, 1290, 1391, 1416, 1421, 1993, 2039
Cac8I GCNNGC 4 cut(s) 75, 342, 1851, 2112
CaiI CAGNNNCTG 1 cut(s) 517
CciI TCATGA 2 cut(s) 220, 2129
CfoI GCGC 1 cut(s) 1029
Cfr10I RCCGGY 2 cut(s) 340, 431
Cfr13I GGNCC 2 cut(s) 967, 2055
Csp6I GTAC 7 cut(s) 776, 803, 1056, 1663, 2029, 2073, 2105
CspAI ACCGGT 1 cut(s) 431
CspCI CAANNNNNGTGG 2 cut(s) 1458, 1493
CviQI GTAC 7 cut(s) 776, 803, 1056, 1663, 2029, 2073, 2105
DdeI CTNAG 5 cut(s) 401, 437, 1094, 1708, 1859
DpnI GATC 4 cut(s) 38, 950, 1864, 2038
DpnII GATC 4 cut(s) 36, 948, 1862, 2036
DraI TTTAAA 1 cut(s) 378
DrdI GACNNNNNNGTC 1 cut(s) 1612
DseDI GACNNNNNNGTC 1 cut(s) 1612
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 2 cut(s) 1221, 2092
EarI CTCTTC 2 cut(s) 1221, 2092
Ecl136II GAGCTC 1 cut(s) 632
Eco130I CCWWGG 4 cut(s) 123, 970, 1675, 1742
Eco24I GRGCYC 1 cut(s) 634
Eco32I GATATC 1 cut(s) 82
Eco47I GGWCC 1 cut(s) 2055
Eco53kI GAGCTC 1 cut(s) 632
Eco57I CTGAAG 3 cut(s) 494, 668, 1243
Eco88I CYCGRG 1 cut(s) 1958
EcoICRI GAGCTC 1 cut(s) 632
EcoNI CCTNNNNNAGG 1 cut(s) 279
EcoRII CCWGG 5 cut(s) 274, 790, 798, 883, 1118
EcoRV GATATC 1 cut(s) 82
EcoT14I CCWWGG 4 cut(s) 123, 970, 1675, 1742
EcoT22I ATGCAT 1 cut(s) 1147
EcoT38I GRGCYC 1 cut(s) 634
ErhI CCWWGG 4 cut(s) 123, 970, 1675, 1742
FalI AAGNNNNNCTT 2 cut(s) 129, 161
FaqI GGGAC 4 cut(s) 101, 727, 1167, 1941
FauI CCCGC 1 cut(s) 1227
FblI GTMKAC 1 cut(s) 1978
Fnu4HI GCNGC 4 cut(s) 216, 1232, 1313, 2083
FokI GGATG 3 cut(s) 40, 402, 471
FriOI GRGCYC 1 cut(s) 634
Fsp4HI GCNGC 4 cut(s) 216, 1232, 1313, 2083
FspBI CTAG 5 cut(s) 563, 734, 866, 1347, 1505
GlaI GCGC 1 cut(s) 1028
GluI GCNGC 4 cut(s) 216, 1232, 1313, 2083
GsaI CCCAGC 1 cut(s) 749
GsuI CTGGAG 6 cut(s) 89, 648, 1382, 1517, 1916, 2063
HaeIII GGCC 3 cut(s) 254, 837, 968
HapII CCGG 4 cut(s) 341, 432, 546, 965
HhaI GCGC 1 cut(s) 1029
Hin6I GCGC 1 cut(s) 1027
HinP1I GCGC 1 cut(s) 1027
HincII GTYRAC 1 cut(s) 1191
HindII GTYRAC 1 cut(s) 1191
HindIII AAGCTT 3 cut(s) 71, 1382, 1847
HpaII CCGG 4 cut(s) 341, 432, 546, 965
HphI GGTGA 5 cut(s) 12, 1061, 1645, 1915, 2003
Hpy166II GTNNAC 6 cut(s) 560, 706, 1191, 1391, 1653, 1979
Hpy188I TCNGA 6 cut(s) 513, 893, 1107, 1152, 1605, 1862
Hpy8I GTNNAC 6 cut(s) 560, 706, 1191, 1391, 1653, 1979
HpyAV CCTTC 6 cut(s) 88, 245, 492, 1580, 1724, 1757
HpyCH4III ACNGT 5 cut(s) 780, 1285, 1520, 1667, 1899
HpyCH4IV ACGT 2 cut(s) 9, 1784
HpyF10VI GCNNNNNNNGC 6 cut(s) 202, 224, 629, 815, 1026, 1285
HpyF3I CTNAG 5 cut(s) 401, 437, 1094, 1708, 1859
HpySE526I ACGT 2 cut(s) 9, 1784
HspAI GCGC 1 cut(s) 1027
KroI GCCGGC 1 cut(s) 340
KroNI GCCGGC 1 cut(s) 342
Kzo9I GATC 4 cut(s) 36, 948, 1862, 2036
LguI GCTCTTC 1 cut(s) 2092
LmnI GCTCC 3 cut(s) 160, 629, 1228
Lsp1109I GCAGC 4 cut(s) 202, 1218, 1299, 2094
LweI GCATC 5 cut(s) 62, 142, 214, 1349, 1527
MaeI CTAG 5 cut(s) 563, 734, 866, 1347, 1505
MaeII ACGT 2 cut(s) 9, 1784
MaeIII GTNAC 5 cut(s) 247, 498, 1500, 1514, 1767
MalI GATC 4 cut(s) 38, 950, 1864, 2038
MbiI CCGCTC 1 cut(s) 1648
MboI GATC 4 cut(s) 36, 948, 1862, 2036
MfeI CAATTG 2 cut(s) 940, 1551
MflI RGATCY 2 cut(s) 948, 1862
MhlI GDGCHC 2 cut(s) 562, 634
MluCI AATT 9 cut(s) 568, 825, 853, 921, 940, 1163, 1551, 1800, 1888
MlyI GAGTC 6 cut(s) 280, 414, 677, 901, 988, 1508
Mph1103I ATGCAT 1 cut(s) 1147
MroNI GCCGGC 1 cut(s) 340
MroXI GAANNNNTTC 2 cut(s) 960, 1302
MseI TTAA 4 cut(s) 377, 492, 1166, 1271
MslI CAYNNNNRTG 2 cut(s) 1658, 2128
MspI CCGG 4 cut(s) 341, 432, 546, 965
MspR9I CCNGG 6 cut(s) 276, 546, 792, 800, 885, 1120
MunI CAATTG 2 cut(s) 940, 1551
MvaI CCWGG 5 cut(s) 276, 792, 800, 885, 1120
MwoI GCNNNNNNNGC 6 cut(s) 202, 224, 629, 815, 1026, 1285
NaeI GCCGGC 1 cut(s) 342
NciI CCSGG 1 cut(s) 546
NdeII GATC 4 cut(s) 36, 948, 1862, 2036
NgoMIV GCCGGC 1 cut(s) 340
NmuCI GTSAC 2 cut(s) 1500, 1514
NsiI ATGCAT 1 cut(s) 1147
NspI RCATGY 2 cut(s) 122, 809
NspV TTCGAA 2 cut(s) 420, 1717
PagI TCATGA 2 cut(s) 220, 2129
PciSI GCTCTTC 1 cut(s) 2092
PdiI GCCGGC 1 cut(s) 342
PdmI GAANNNNTTC 2 cut(s) 960, 1302
PfeI GAWTC 7 cut(s) 355, 541, 574, 888, 976, 1751, 1816
PflMI CCANNNNNTGG 2 cut(s) 1443, 1676
PfoI TCCNGGA 2 cut(s) 274, 883
PinAI ACCGGT 1 cut(s) 431
PkrI GCNGC 4 cut(s) 217, 1233, 1314, 2084
PleI GAGTC 6 cut(s) 279, 413, 676, 901, 988, 1507
PpsI GAGTC 6 cut(s) 279, 413, 676, 901, 988, 1507
Psp124BI GAGCTC 1 cut(s) 634
Psp6I CCWGG 5 cut(s) 274, 790, 798, 883, 1118
PspFI CCCAGC 1 cut(s) 745
PspGI CCWGG 5 cut(s) 274, 790, 798, 883, 1118
PspPI GGNCC 2 cut(s) 967, 2055
PstI CTGCAG 1 cut(s) 1598
PstNI CAGNNNCTG 1 cut(s) 517
PsuI RGATCY 2 cut(s) 948, 1862
RsaI GTAC 7 cut(s) 777, 804, 1057, 1664, 2030, 2074, 2106
RsaNI GTAC 7 cut(s) 776, 803, 1056, 1663, 2029, 2073, 2105
RseI CAYNNNNRTG 2 cut(s) 1658, 2128
SacI GAGCTC 1 cut(s) 634
SapI GCTCTTC 1 cut(s) 2092
SaqAI TTAA 4 cut(s) 377, 492, 1166, 1271
SatI GCNGC 4 cut(s) 216, 1232, 1313, 2083
Sau3AI GATC 4 cut(s) 36, 948, 1862, 2036
Sau96I GGNCC 2 cut(s) 967, 2055
SchI GAGTC 6 cut(s) 280, 414, 677, 901, 988, 1508
ScrFI CCNGG 6 cut(s) 276, 546, 792, 800, 885, 1120
SduI GDGCHC 2 cut(s) 562, 634
SfaNI GCATC 5 cut(s) 62, 142, 214, 1349, 1527
SfcI CTRYAG 1 cut(s) 1594
SfuI TTCGAA 2 cut(s) 420, 1717
SinI GGWCC 1 cut(s) 2055
SmiMI CAYNNNNRTG 2 cut(s) 1658, 2128
SmlI CTYRAG 6 cut(s) 206, 989, 1156, 1643, 1732, 1964
SmoI CTYRAG 6 cut(s) 206, 989, 1156, 1643, 1732, 1964
Sse9I AATT 9 cut(s) 568, 825, 853, 921, 940, 1163, 1551, 1800, 1888
SsiI CCGC 4 cut(s) 818, 1234, 1648, 2053
SspI AATATT 2 cut(s) 595, 664
SspMI CTAG 5 cut(s) 563, 734, 866, 1347, 1505
SstI GAGCTC 1 cut(s) 634
StyD4I CCNGG 6 cut(s) 274, 544, 790, 798, 883, 1118
StyI CCWWGG 4 cut(s) 123, 970, 1675, 1742
TaaI ACNGT 5 cut(s) 780, 1285, 1520, 1667, 1899
TaiI ACGT 2 cut(s) 12, 1787
TaqI TCGA 6 cut(s) 309, 420, 1124, 1535, 1619, 1717
TasI AATT 9 cut(s) 568, 825, 853, 921, 940, 1163, 1551, 1800, 1888
TatI WGTACW 5 cut(s) 1055, 1662, 2028, 2072, 2104
TfiI GAWTC 7 cut(s) 355, 541, 574, 888, 976, 1751, 1816
Tru1I TTAA 4 cut(s) 377, 492, 1166, 1271
Tru9I TTAA 4 cut(s) 377, 492, 1166, 1271
TscAI CASTG 9 cut(s) 522, 1102, 1267, 1290, 1398, 1423, 1428, 1993, 2046
TseFI GTSAC 2 cut(s) 1500, 1514
TseI GCWGC 4 cut(s) 215, 1231, 1312, 2082
Tsp45I GTSAC 2 cut(s) 1500, 1514
TspDTI ATGAA 6 cut(s) 107, 354, 668, 801, 1152, 2112
TspRI CASTG 9 cut(s) 522, 1102, 1267, 1290, 1398, 1423, 1428, 1993, 2046
Van91I CCANNNNNTGG 2 cut(s) 1443, 1676
VneI GTGCAC 1 cut(s) 558
VpaK11BI GGWCC 1 cut(s) 2055
XagI CCTNNNNNAGG 1 cut(s) 279
XapI RAATTY 3 cut(s) 568, 825, 853
XceI RCATGY 2 cut(s) 122, 809
XmiI GTMKAC 1 cut(s) 1978
XmnI GAANNNNTTC 2 cut(s) 960, 1302
XspI CTAG 5 cut(s) 563, 734, 866, 1347, 1505
Zsp2I ATGCAT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.