Rmu_ssc0000291.1_g000027

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000291.1
OG0000400
Physical Location & Seq
Forward (+)
109048 .. 120507
11460 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000291.1_g000027.1.cds

Sequence Viewer

Length: 2388 bp
atgtttccaaaaggttatgaattcagcaagcacaagttaattcatatgtggatggcggaaggcttattattggatttagaaaatattcgccactcctctgttgtttatagatatagagcaattactattccacgagctctgtatgaagcacaacacctgcgaagtctgttatttattggacaatctggcttgataaagaacattcataaaatctgttcaagttttgtatacttgcgtatgctagatctgaacagttgtgatgttcacatattgccagaatcattgtgcgacttaatatgtttgagatatcttgacctgtcttacacaactatattcacgcttccttatgaccgggcatcggaactcgtgtctctgcagactttaaacctacttggttgccctaatctgaggcgtttgcctgacttgggaggcatgacaggcctaagacatctcgatataactgcatgcgcaagtttgactcagatgcctaagggtattggagaactacatcaacttgagacattgccattgtatgttattagcgacaacggcgaggcccttgagctgggtggtttgaatctttatggcacgttgaatcctacacacctggaaaatgtaaccaaggtagtagaagcgaaatcagcaggattgaggatgaaggagaatatcgagtcattgggactatattggagaggcgaagatgtggatgaatcaatcatgataaaactacctaaagcccaacaagaagcagtcaactcaggatctcagagagtgccacagtattctgaccctgtggaagaaattcttgaagccttgaaaccgcacgacaatttgaagatgctagttataaatgggtatccaggaactagacttcctgattggactctcccgaatctaactgcagtttatttgaaggaatgtagaaactgtcagaatcttccagctcttgggaatctcctgatgcttaaaactctttctttgcaaggaatggatagtctgaaaaacgttggtgcagatttctacggtgatgataccagcataccattcttgtcacttgaagagttatcgctctgtgatttatccaacttggaagagtggtcgagtgcaaataacatgacttcattcccgagattgagaaagttaaccgttaacagatgtcccaagttagcacatataccattatctgaatctcttcaacctttggagttgcggggttgtaaattacgtttgatgtccatagcaaatttaagtttactttctgtgctcgtcttagaaaatattccagacctatcctctctcccagaaggtcttattgcatcagctcatctgtcttgtctgaagattttgtcatgccccaagcttcgttcactggctttggagatgggaaattgccttactagtctgaaatcattgaccattggttggtgtcaagatctttcgtctctccctgagagtttgcaaaacctcaaagccctggaatcactggagattagtgactgtcactacataatctccatgcccgatggtgctattggaggtttgagttcccttcgaactttgtccattgagaactgcactagtctgaattccttgtcctcaagtttggaacatttgacattccttgaacacttgaccattatgtattgtccaagtcttgattcttttccggagggtgtgcaacacctctctgcccttcgaagtttgactatcctgagctgtccttggtttgagtctctgccaaatggcttacaaaatgtcgggacactgcactgtttggaaattagtagctgcacaaatctaagagctttgccagaatggtttgagaatcttgactctcttagatccttgaccatatctgcttgtcctaatttagaagaattgccggcaggtctaaagcatctcactaaactccagtacctctctatccaagaatgtcctgagcttgagcaaagatgcagacaaggaagtggagaggattggttcaaaatagctcatgttccacataaatacattgaagtttccaaaaccagaaactcagaaactgtccgttctctctcctcaccctcgactgacccggttttccgaccaggagtgaactcgcagctccggcgacctctaccagtgaaactttccatattgactcgcctccttgttccgctcctcctgtggtggcatctaccggagattctcctccacggcggcactgcaaggcggcaaagtttaagagagaaaagtcatcctccaccttgctatgctccggtgactagtggccggcagcgaactccagcgaccggtgactggaatctggcgattggtgacaggaatccggaatccggctacggaacaggtgaccggattccggcgtctgattttattgccccccaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

795

Amino Acids

88.54

Weight (kDa)

6.05

Isoelectric Point (pI)

57.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 848
AarI CACCTGC 1 cut(s) 165
Acc16I TGCGCA 1 cut(s) 469
Acc36I ACCTGC 2 cut(s) 165, 1877
AccB7I CCANNNNNTGG 2 cut(s) 947, 1422
AccBSI CCGCTC 1 cut(s) 2158
AccI GTMKAC 1 cut(s) 228
AccIII TCCGGA 2 cut(s) 1666, 2326
AciI CCGC 6 cut(s) 56, 821, 1210, 2156, 2199, 2212
AclI AACGTT 1 cut(s) 1005
AclWI GGATC 2 cut(s) 769, 1836
AcoI YGGCCR 1 cut(s) 2269
AcsI RAATTY 4 cut(s) 20, 801, 1243, 1585
AcuI CTGAAG 1 cut(s) 1358
AcyI GRCGYC 1 cut(s) 2363
AfaI GTAC 1 cut(s) 1916
AfiI CCNNNNNNNGG 9 cut(s) 358, 425, 565, 947, 1422, 2291, 2298, 2333, 2359
AgeI ACCGGT 1 cut(s) 2291
AhlI ACTAGT 3 cut(s) 1397, 1577, 2264
AjnI CCWGG 4 cut(s) 606, 859, 1473, 2086
AjuI GAANNNNNNNTTGG 2 cut(s) 1642, 1674
AloI GAACNNNNNNTCC 2 cut(s) 856, 888
Alw21I GWGCWC 2 cut(s) 139, 1266
Alw26I GTCTC 4 cut(s) 375, 512, 1446, 1737
AlwI GGATC 2 cut(s) 769, 1836
AlwNI CAGNNNCTG 1 cut(s) 2042
Ama87I CYCGRG 1 cut(s) 1126
Aor13HI TCCGGA 2 cut(s) 1666, 2326
AoxI GGCC 3 cut(s) 439, 555, 2269
ApeKI GCWGC 3 cut(s) 1788, 2101, 2275
ApoI RAATTY 4 cut(s) 20, 801, 1243, 1585
AsiGI ACCGGT 1 cut(s) 2291
Asp700I GAANNNNTTC 4 cut(s) 84, 801, 1191, 1278
AspLEI GCGC 1 cut(s) 470
AspS9I GGNCC 1 cut(s) 556
AsuC2I CCSGG 2 cut(s) 353, 2075
AsuHPI GGTGA 6 cut(s) 1037, 2052, 2272, 2306, 2327, 2360
AsuII TTCGAA 2 cut(s) 1552, 1696
AvaI CYCGRG 1 cut(s) 1126
AxyI CCTNAGG 1 cut(s) 489
BaeI ACNNNNGTAYC 2 cut(s) 1898, 1931
BanII GRGCYC 1 cut(s) 139
BauI CACGAG 2 cut(s) 132, 365
Bbv12I GWGCWC 2 cut(s) 139, 1266
BbvI GCAGC 3 cut(s) 1775, 2113, 2287
BccI CCATC 3 cut(s) 46, 1375, 1517
BceAI ACGGC 2 cut(s) 565, 2212
BcgI CGANNNNNNTGC 2 cut(s) 443, 477
BciT130I CCWGG 4 cut(s) 608, 861, 1475, 2088
BciVI GTATCC 1 cut(s) 867
BcnI CCSGG 2 cut(s) 353, 2075
BcoDI GTCTC 4 cut(s) 375, 512, 1446, 1737
BcuI ACTAGT 3 cut(s) 1397, 1577, 2264
BfaI CTAG 6 cut(s) 242, 842, 867, 1398, 1578, 2265
BfmI CTRYAG 2 cut(s) 374, 900
BfuAI ACCTGC 2 cut(s) 165, 1877
BfuI GTATCC 1 cut(s) 867
BglII AGATCT 2 cut(s) 244, 1432
BisI GCNGC 5 cut(s) 1789, 2102, 2200, 2213, 2276
BlsI GCNGC 5 cut(s) 1790, 2103, 2201, 2214, 2277
Bme1390I CCNGG 6 cut(s) 353, 608, 861, 1475, 2075, 2088
BmeT110I CYCGRG 1 cut(s) 1126
BmgT120I GGNCC 1 cut(s) 556
BmrFI CCNGG 6 cut(s) 353, 608, 861, 1475, 2075, 2088
BmsI GCATC 8 cut(s) 365, 474, 828, 951, 1325, 1906, 1943, 2182
BpmI CTGGAG 3 cut(s) 1505, 1895, 2268
Bpu10I CCTNAGC 2 cut(s) 1712, 1938
Bpu14I TTCGAA 2 cut(s) 1552, 1696
BpuEI CTTGAG 4 cut(s) 536, 581, 1582, 1964
BpuMI CCSGG 2 cut(s) 353, 2075
BsaHI GRCGYC 1 cut(s) 2363
BsaJI CCNNGG 4 cut(s) 621, 1473, 1721, 2194
BsaWI WCCGGW 6 cut(s) 1666, 2179, 2257, 2291, 2326, 2352
BsaXI ACNNNNNCTCC 2 cut(s) 1496, 1526
Bsc4I CCNNNNNNNGG 9 cut(s) 358, 425, 565, 947, 1422, 2291, 2298, 2333, 2359
Bse118I RCCGGY 3 cut(s) 1882, 2271, 2291
Bse1I ACTGG 5 cut(s) 1374, 1488, 1912, 2120, 2303
Bse21I CCTNAGG 1 cut(s) 489
Bse3DI GCAATG 1 cut(s) 521
BseAI TCCGGA 2 cut(s) 1666, 2326
BseBI CCWGG 4 cut(s) 608, 861, 1475, 2088
BseDI CCNNGG 4 cut(s) 621, 1473, 1721, 2194
BseGI GGATG 4 cut(s) 57, 660, 712, 2236
BseLI CCNNNNNNNGG 9 cut(s) 358, 425, 565, 947, 1422, 2291, 2298, 2333, 2359
BseMI GCAATG 1 cut(s) 521
BseMII CTCAG 8 cut(s) 398, 494, 771, 779, 1440, 1703, 1929, 2049
BseNI ACTGG 5 cut(s) 1374, 1488, 1912, 2120, 2303
BseRI GAGGAG 4 cut(s) 85, 2047, 2150, 2180
BseXI GCAGC 3 cut(s) 1775, 2113, 2287
BseYI CCCAGC 1 cut(s) 565
BsgI GTGCAG 4 cut(s) 1032, 1558, 1751, 1774
Bsh1285I CGRYCG 1 cut(s) 2292
BshFI GGCC 3 cut(s) 441, 557, 2271
BshTI ACCGGT 1 cut(s) 2291
BsiEI CGRYCG 1 cut(s) 2292
BsiHKAI GWGCWC 2 cut(s) 139, 1266
BsiHKCI CYCGRG 1 cut(s) 1126
BslFI GGGAC 3 cut(s) 693, 1143, 1774
BslI CCNNNNNNNGG 9 cut(s) 358, 425, 565, 947, 1422, 2291, 2298, 2333, 2359
BsmAI GTCTC 4 cut(s) 375, 512, 1446, 1737
BsmBI CGTCTC 1 cut(s) 1446
BsmFI GGGAC 3 cut(s) 693, 1143, 1774
BsnI GGCC 3 cut(s) 441, 557, 2271
BsoBI CYCGRG 1 cut(s) 1126
Bsp119I TTCGAA 2 cut(s) 1552, 1696
Bsp1286I GDGCHC 2 cut(s) 139, 1266
Bsp13I TCCGGA 2 cut(s) 1666, 2326
Bsp143I GATC 4 cut(s) 244, 761, 1432, 1841
BspACI CCGC 6 cut(s) 56, 821, 1210, 2156, 2199, 2212
BspANI GGCC 3 cut(s) 441, 557, 2271
BspCNI CTCAG 8 cut(s) 399, 493, 770, 778, 1441, 1704, 1930, 2048
BspEI TCCGGA 2 cut(s) 1666, 2326
BspHI TCATGA 1 cut(s) 717
BspMAI CTGCAG 2 cut(s) 378, 904
BspMI ACCTGC 2 cut(s) 165, 1877
BspPI GGATC 2 cut(s) 769, 1836
BspT104I TTCGAA 2 cut(s) 1552, 1696
BsrBI CCGCTC 1 cut(s) 2158
BsrDI GCAATG 1 cut(s) 521
BsrFI RCCGGY 3 cut(s) 1882, 2271, 2291
BsrI ACTGG 5 cut(s) 1374, 1488, 1912, 2120, 2303
BssAI RCCGGY 3 cut(s) 1882, 2271, 2291
BssECI CCNNGG 4 cut(s) 621, 1473, 1721, 2194
BssMI GATC 4 cut(s) 244, 761, 1432, 1841
BssNAI GTATAC 1 cut(s) 229
BssNI GRCGYC 1 cut(s) 2363
BssSI CACGAG 2 cut(s) 132, 365
BssT1I CCWWGG 2 cut(s) 621, 1721
Bst1107I GTATAC 1 cut(s) 229
Bst2BI CACGAG 2 cut(s) 132, 365
Bst2UI CCWGG 4 cut(s) 608, 861, 1475, 2088
Bst4CI ACNGT 8 cut(s) 254, 780, 929, 1025, 1147, 1499, 1772, 2044
Bst6I CTCTTC 3 cut(s) 1053, 1086, 1197
BstACI GRCGYC 1 cut(s) 2363
BstBI TTCGAA 2 cut(s) 1552, 1696
BstC8I GCNNGC 4 cut(s) 29, 466, 1884, 2273
BstDSI CCRYGG 1 cut(s) 2194
BstEII GGTNACC 1 cut(s) 2348
BstF5I GGATG 4 cut(s) 57, 660, 712, 2236
BstHHI GCGC 1 cut(s) 470
BstKTI GATC 4 cut(s) 247, 764, 1435, 1844
BstMAI GTCTC 4 cut(s) 375, 512, 1446, 1737
BstMBI GATC 4 cut(s) 244, 761, 1432, 1841
BstMCI CGRYCG 1 cut(s) 2292
BstMWI GCNNNNNNNGC 4 cut(s) 438, 549, 641, 2107
BstNI CCWGG 4 cut(s) 608, 861, 1475, 2088
BstNSI RCATGY 1 cut(s) 468
BstPI GGTNACC 1 cut(s) 2348
BstSCI CCNGG 6 cut(s) 351, 606, 859, 1473, 2073, 2086
BstSFI CTRYAG 2 cut(s) 374, 900
BstV1I GCAGC 3 cut(s) 1775, 2113, 2287
BstX2I RGATCY 4 cut(s) 244, 761, 1432, 1841
BstYI RGATCY 4 cut(s) 244, 761, 1432, 1841
BstZ17I GTATAC 1 cut(s) 229
Bsu36I CCTNAGG 1 cut(s) 489
BsuI GTATCC 1 cut(s) 867
BsuRI GGCC 3 cut(s) 441, 557, 2271
BtgI CCRYGG 1 cut(s) 2194
BtsCI GGATG 4 cut(s) 57, 660, 712, 2236
BtsI GCAGTG 2 cut(s) 1763, 2202
BtsIMutI CAGTG 6 cut(s) 1367, 1481, 1763, 1768, 2127, 2202
BveI ACCTGC 2 cut(s) 165, 1877
Cac8I GCNNGC 4 cut(s) 29, 466, 1884, 2273
CaiI CAGNNNCTG 1 cut(s) 2042
CciI TCATGA 1 cut(s) 717
CfoI GCGC 1 cut(s) 470
Cfr10I RCCGGY 3 cut(s) 1882, 2271, 2291
Cfr13I GGNCC 1 cut(s) 556
CseI GACGC 1 cut(s) 2352
Csp6I GTAC 1 cut(s) 1915
CspAI ACCGGT 1 cut(s) 2291
CviAII CATG 7 cut(s) 433, 465, 718, 1114, 1350, 1516, 1994
CviQI GTAC 1 cut(s) 1915
DpnI GATC 4 cut(s) 246, 763, 1434, 1843
DpnII GATC 4 cut(s) 244, 761, 1432, 1841
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 1 cut(s) 2269
Eam1104I CTCTTC 3 cut(s) 1053, 1086, 1197
EarI CTCTTC 3 cut(s) 1053, 1086, 1197
EciI GGCGGA 1 cut(s) 71
Ecl136II GAGCTC 1 cut(s) 137
Eco130I CCWWGG 2 cut(s) 621, 1721
Eco147I AGGCCT 1 cut(s) 441
Eco24I GRGCYC 1 cut(s) 139
Eco32I GATATC 1 cut(s) 308
Eco53kI GAGCTC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 1358
Eco81I CCTNAGG 1 cut(s) 489
Eco88I CYCGRG 1 cut(s) 1126
Eco91I GGTNACC 1 cut(s) 2348
EcoICRI GAGCTC 1 cut(s) 137
EcoO109I RGGNCCY 1 cut(s) 556
EcoO65I GGTNACC 1 cut(s) 2348
EcoRI GAATTC 2 cut(s) 20, 1585
EcoRII CCWGG 4 cut(s) 606, 859, 1473, 2086
EcoRV GATATC 1 cut(s) 308
EcoT14I CCWWGG 2 cut(s) 621, 1721
EcoT38I GRGCYC 1 cut(s) 139
ErhI CCWWGG 2 cut(s) 621, 1721
Esp3I CGTCTC 1 cut(s) 1446
FaeI CATG 7 cut(s) 436, 468, 721, 1117, 1353, 1519, 1997
FalI AAGNNNNNCTT 2 cut(s) 789, 821
FaqI GGGAC 3 cut(s) 693, 1143, 1774
FatI CATG 7 cut(s) 432, 464, 717, 1113, 1349, 1515, 1993
FauI CCCGC 1 cut(s) 1203
FauNDI CATATG 1 cut(s) 45
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 5 cut(s) 1789, 2102, 2200, 2213, 2276
FokI GGATG 4 cut(s) 64, 667, 719, 2223
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 5 cut(s) 1789, 2102, 2200, 2213, 2276
FspBI CTAG 6 cut(s) 242, 842, 867, 1398, 1578, 2265
FspI TGCGCA 1 cut(s) 469
GlaI GCGC 1 cut(s) 469
GluI GCNGC 5 cut(s) 1789, 2102, 2200, 2213, 2276
GsaI CCCAGC 1 cut(s) 569
GsuI CTGGAG 3 cut(s) 1505, 1895, 2268
HaeIII GGCC 3 cut(s) 441, 557, 2271
HgaI GACGC 1 cut(s) 2352
HhaI GCGC 1 cut(s) 470
Hin1I GRCGYC 1 cut(s) 2363
Hin1II CATG 7 cut(s) 436, 468, 721, 1117, 1353, 1519, 1997
Hin6I GCGC 1 cut(s) 468
HinP1I GCGC 1 cut(s) 468
HincII GTYRAC 3 cut(s) 754, 1143, 1150
HindII GTYRAC 3 cut(s) 754, 1143, 1150
HindIII AAGCTT 1 cut(s) 1358
HpaI GTTAAC 2 cut(s) 1143, 1150
HphI GGTGA 6 cut(s) 1037, 2052, 2272, 2306, 2327, 2360
Hpy166II GTNNAC 8 cut(s) 229, 265, 754, 1143, 1150, 1253, 1367, 2095
Hpy8I GTNNAC 8 cut(s) 229, 265, 754, 1143, 1150, 1253, 1367, 2095
HpyAV CCTTC 6 cut(s) 53, 652, 907, 1298, 1559, 1703
HpyCH4III ACNGT 8 cut(s) 254, 780, 929, 1025, 1147, 1499, 1772, 2044
HpyCH4IV ACGT 3 cut(s) 590, 1005, 1225
HpyF10VI GCNNNNNNNGC 4 cut(s) 438, 549, 641, 2107
HpySE526I ACGT 3 cut(s) 590, 1005, 1225
Hsp92I GRCGYC 1 cut(s) 2363
Hsp92II CATG 7 cut(s) 436, 468, 721, 1117, 1353, 1519, 1997
HspAI GCGC 1 cut(s) 468
Kpn2I TCCGGA 2 cut(s) 1666, 2326
KroI GCCGGC 2 cut(s) 1882, 2271
KroNI GCCGGC 2 cut(s) 1884, 2273
KspAI GTTAAC 2 cut(s) 1143, 1150
Kzo9I GATC 4 cut(s) 244, 761, 1432, 1841
LmnI GCTCC 3 cut(s) 2109, 2163, 2260
Lsp1109I GCAGC 3 cut(s) 1775, 2113, 2287
LweI GCATC 8 cut(s) 365, 474, 828, 951, 1325, 1906, 1943, 2182
MaeI CTAG 6 cut(s) 242, 842, 867, 1398, 1578, 2265
MaeII ACGT 3 cut(s) 590, 1005, 1225
MaeIII GTNAC 8 cut(s) 616, 1050, 1493, 1499, 2260, 2294, 2315, 2348
MalI GATC 4 cut(s) 246, 763, 1434, 1843
MbiI CCGCTC 1 cut(s) 2158
MboI GATC 4 cut(s) 244, 761, 1432, 1841
MboII GAAGA 9 cut(s) 710, 809, 847, 929, 1070, 1103, 1184, 1351, 1886
MflI RGATCY 4 cut(s) 244, 761, 1432, 1841
MhlI GDGCHC 2 cut(s) 139, 1266
MlyI GAGTC 6 cut(s) 472, 680, 877, 1739, 1826, 2134
MmeI TCCRAC 2 cut(s) 1107, 2107
MroI TCCGGA 2 cut(s) 1666, 2326
MroNI GCCGGC 2 cut(s) 1882, 2271
MroXI GAANNNNTTC 4 cut(s) 84, 801, 1191, 1278
MseI TTAA 8 cut(s) 38, 293, 383, 966, 1142, 1149, 1247, 2222
MspR9I CCNGG 6 cut(s) 353, 608, 861, 1475, 2075, 2088
MvaI CCWGG 4 cut(s) 608, 861, 1475, 2088
MwoI GCNNNNNNNGC 4 cut(s) 438, 549, 641, 2107
NaeI GCCGGC 2 cut(s) 1884, 2273
NciI CCSGG 2 cut(s) 353, 2075
NdeI CATATG 1 cut(s) 45
NdeII GATC 4 cut(s) 244, 761, 1432, 1841
NgoMIV GCCGGC 2 cut(s) 1882, 2271
NlaIII CATG 7 cut(s) 436, 468, 721, 1117, 1353, 1519, 1997
NmuCI GTSAC 7 cut(s) 1050, 1493, 1499, 2260, 2294, 2315, 2348
NsbI TGCGCA 1 cut(s) 469
NspI RCATGY 1 cut(s) 468
NspV TTCGAA 2 cut(s) 1552, 1696
PaeI GCATGC 1 cut(s) 468
PagI TCATGA 1 cut(s) 717
PaqCI CACCTGC 1 cut(s) 165
PceI AGGCCT 1 cut(s) 441
PdiI GCCGGC 2 cut(s) 1884, 2273
PdmI GAANNNNTTC 4 cut(s) 84, 801, 1191, 1278
PflMI CCANNNNNTGG 2 cut(s) 947, 1422
PfoI TCCNGGA 1 cut(s) 859
PinAI ACCGGT 1 cut(s) 2291
PkrI GCNGC 5 cut(s) 1790, 2103, 2201, 2214, 2277
PleI GAGTC 6 cut(s) 472, 679, 877, 1738, 1826, 2134
PpsI GAGTC 6 cut(s) 472, 679, 877, 1738, 1826, 2134
PsiI TTATAA 1 cut(s) 848
Psp124BI GAGCTC 1 cut(s) 139
Psp1406I AACGTT 1 cut(s) 1005
Psp6I CCWGG 4 cut(s) 606, 859, 1473, 2086
PspEI GGTNACC 1 cut(s) 2348
PspFI CCCAGC 1 cut(s) 565
PspGI CCWGG 4 cut(s) 606, 859, 1473, 2086
PspPI GGNCC 1 cut(s) 556
PstI CTGCAG 2 cut(s) 378, 904
PstNI CAGNNNCTG 1 cut(s) 2042
PsuI RGATCY 4 cut(s) 244, 761, 1432, 1841
RsaI GTAC 1 cut(s) 1916
RsaNI GTAC 1 cut(s) 1915
SacI GAGCTC 1 cut(s) 139
SaqAI TTAA 8 cut(s) 38, 293, 383, 966, 1142, 1149, 1247, 2222
SatI GCNGC 5 cut(s) 1789, 2102, 2200, 2213, 2276
Sau3AI GATC 4 cut(s) 244, 761, 1432, 1841
Sau96I GGNCC 1 cut(s) 556
SchI GAGTC 6 cut(s) 472, 680, 877, 1739, 1826, 2134
ScrFI CCNGG 6 cut(s) 353, 608, 861, 1475, 2075, 2088
SduI GDGCHC 2 cut(s) 139, 1266
SfaNI GCATC 8 cut(s) 365, 474, 828, 951, 1325, 1906, 1943, 2182
SfcI CTRYAG 2 cut(s) 374, 900
SfuI TTCGAA 2 cut(s) 1552, 1696
SmlI CTYRAG 4 cut(s) 515, 560, 1597, 1943
SmoI CTYRAG 4 cut(s) 515, 560, 1597, 1943
SpeI ACTAGT 3 cut(s) 1397, 1577, 2264
SphI GCATGC 1 cut(s) 468
SseBI AGGCCT 1 cut(s) 441
SsiI CCGC 6 cut(s) 56, 821, 1210, 2156, 2199, 2212
SspI AATATT 2 cut(s) 85, 1279
SspMI CTAG 6 cut(s) 242, 842, 867, 1398, 1578, 2265
SstI GAGCTC 1 cut(s) 139
StuI AGGCCT 1 cut(s) 441
StyD4I CCNGG 6 cut(s) 351, 606, 859, 1473, 2073, 2086
StyI CCWWGG 2 cut(s) 621, 1721
TaaI ACNGT 8 cut(s) 254, 780, 929, 1025, 1147, 1499, 1772, 2044
TaiI ACGT 3 cut(s) 593, 1008, 1228
TaqI TCGA 6 cut(s) 453, 669, 1100, 1552, 1696, 2066
TauI GCSGC 2 cut(s) 2202, 2215
Tru1I TTAA 8 cut(s) 38, 293, 383, 966, 1142, 1149, 1247, 2222
Tru9I TTAA 8 cut(s) 38, 293, 383, 966, 1142, 1149, 1247, 2222
TscAI CASTG 6 cut(s) 1374, 1488, 1770, 1775, 2127, 2209
TseFI GTSAC 7 cut(s) 1050, 1493, 1499, 2260, 2294, 2315, 2348
TseI GCWGC 3 cut(s) 1788, 2101, 2275
Tsp45I GTSAC 7 cut(s) 1050, 1493, 1499, 2260, 2294, 2315, 2348
TspDTI ATGAA 7 cut(s) 32, 33, 159, 194, 671, 723, 1110
TspGWI ACGGA 2 cut(s) 2036, 2355
TspRI CASTG 6 cut(s) 1374, 1488, 1770, 1775, 2127, 2209
Van91I CCANNNNNTGG 2 cut(s) 947, 1422
XapI RAATTY 4 cut(s) 20, 801, 1243, 1585
XceI RCATGY 1 cut(s) 468
XmiI GTMKAC 1 cut(s) 228
XmnI GAANNNNTTC 4 cut(s) 84, 801, 1191, 1278
XspI CTAG 6 cut(s) 242, 842, 867, 1398, 1578, 2265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.