Rh6AG168100

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000400
Physical Location & Seq
Forward (+)
26873763 .. 26881111
7349 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG168100.1

Sequence Viewer

Length: 1842 bp
ATGACAGGCCTAAGACATCTCGATATAACTGCATGCGCAAGTTTGACTCAGATGCCTAAGGGTATTGGAGAACTACATCAACTTGAGACATTGCCATTGTATGTTATTAGCGACAACAGCGAGGCCCTTAAGCTGGGTGGTTTGAATCTTTATGGCACGTTGAATCTTACACACTTGGAAAATGTAACCAAGGTAGTAGATGCGAAATCAGCAGGATTGAGGATGAAGGAGAATATCGAGTCATTGGGACTATATTGGAGAGGCGAAGATGTGGATGAATCAATCATGATAAAACTAGCTAAAGCCCAACAAGAAGTAGTCAACTCAGGATCTCAGAGAGTGCCACAGAATTCTGAACCCGTGGAAGAAATTCTTGAAGCCTTGAAACCGCACGACAATCTGAAGATGCTAGTTGTAAATGGGTATCCAGGAACTAGACTTCCTGATTGGACTCTTCCGAATCTAACTGCAGTTTATTTGAAGGAATGTAGAGATAGTCAGAATCTTCCAGCTCTTGGGAATCTCCTGATGCTTAAAACTCTTTCTTTGCAAGGAATGGATTGTCTGAAACACATTGGTGCAGATTTCTATGGTGATGGTACCAGCATACCATTCTTGTCACTTGAAGAGTTATCGCTCTGTGATTTATCCAACTTGGAAGAGTGGTCGAGTGCAAATAACATGACTTCATTCCCAAGATTGAGGAAGTTAACCGTTAACAGATGTCCCAAGTTAGCACATATACCATTATCTGAATCTCTTCGACATTTGGAGTTGCGGGGTTGTAAACTACGTTTGATGTCCATAGCAAATTTAAGTTTACTTTCTGTGCTCATCTTAGAAAATATTCCTGACCTATCCTCTCTCCCAGAAGGACTTATTGCATCAGCTCCTCTGTCTTGTCTGAAGATTTTGTCATGCCCCAAGCTTCGTTCGCTGCCTTTGGAGATGGGAAATTGCCTTACTAGTCTGAAATCATTGACCATTGGTTGGTGTCAAGATCTGTCGTCTCTGCCTGAGAGTTTGCAAAACCTCAAAGCCCTGGAATCACTGGAGATTAGTGACTGTCACTACATAATCTCCATGCCGGATGGTGCTATTGGAGGTTTGAGTTCCCTTCGAACTTTGTCCATTGAGAACTGCACTAGTCTGAATTCTTTGTCCTCAAGTTTGGAACATTTGACATTCCTTGAAAACTTGACCATTATGTATTGTCCAAGTCTTGGTTCTTTTCCAGAGGGTGTGCAACACCTCTCTGCCCTTCGAAGTTTGACTATCCTGAGCTGTCCTTGGTTTGACTCTCTGCCAAATGGCTTACAAAATGTCAGGACACTGCACTGTTTGGAAATTAGTAGCTGCACAAATCTAAGAGCTTTGCCAGAATGGTTTGAGAATCTTGACTCTCTTAGATCCTTGACCATATCTGCTTGTCCTAATTTAGAAGAATTGCCGGCAGGTCTAAAGCATCTCACTAAACTCCAGTACCTCTCTATCCAAGAATGTCCTGAGCTTGAGCAAAGATGTAGACAAGGAAGTGGAGAGGATTGGTTCAAAATAGCTCATGTTCCACATAAATACATTGGTTCTCCTCAGGTCAGTCAATCCAGCGAAGCAAGCACCTCAGGCGGATCGTCTTCTCAAACAACTGCTCAGATGAGTAACCTGAACAAATTGGGCTTTGCTCCATTGGGAACAACAGGCTCTGGTTATCACAGGTGGGTTCTTGATGTCCGCCAACATCTCAAGGCCGATGGAATCCTATATACGATTCTTGAGCCTAGCCAGGACGTGCTAACTGTTGAGCAAGCTCAAGCTTTGGAAGCAAATAGAGCAACCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

613

Amino Acids

67.3

Weight (kDa)

5.46

Isoelectric Point (pI)

57.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 4 - 237 3.5e-06 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 45 - 186 3.5e-26 R13L1/DRL21 LRRs
LRR_14 PF23598 226 - 353 9e-06 Leucine-rich repeat region
LRR_13 PF23286 321 - 507 6.2e-07 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 372 - 500 2.6e-11 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 458 - 501 5.3e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 37
Acc36I ACCTGC 1 cut(s) 1445
Acc65I GGTACC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 599
AccB7I CCANNNNNTGG 3 cut(s) 515, 990, 1223
AccI GTMKAC 1 cut(s) 1525
AciI CCGC 4 cut(s) 389, 778, 1626, 1732
AclWI GGATC 3 cut(s) 337, 1404, 1636
AcsI RAATTY 4 cut(s) 349, 369, 811, 1153
AcuI CTGAAG 2 cut(s) 422, 926
AfaI GTAC 2 cut(s) 601, 1484
AfiI CCNNNNNNNGG 4 cut(s) 133, 515, 990, 1223
AflII CTTAAG 1 cut(s) 128
AgsI TTSAA 8 cut(s) 145, 163, 377, 385, 481, 626, 1193, 1552
AhlI ACTAGT 2 cut(s) 965, 1145
AjiI CACGTC 1 cut(s) 1789
AjnI CCWGG 3 cut(s) 427, 1041, 1782
AjuI GAANNNNNNNTTGG 2 cut(s) 1210, 1242
AleI CACNNNNGTG 1 cut(s) 576
AloI GAACNNNNNNTCC 2 cut(s) 424, 456
Alw21I GWGCWC 1 cut(s) 834
Alw26I GTCTC 2 cut(s) 80, 1014
AlwI GGATC 3 cut(s) 337, 1404, 1636
AlwNI CAGNNNCTG 1 cut(s) 1703
AoxI GGCC 3 cut(s) 7, 123, 1746
ApeKI GCWGC 2 cut(s) 937, 1356
ApoI RAATTY 4 cut(s) 349, 369, 811, 1153
Asp700I GAANNNNTTC 3 cut(s) 369, 759, 846
Asp718I GGTACC 1 cut(s) 599
AspLEI GCGC 1 cut(s) 38
AspS9I GGNCC 1 cut(s) 124
AsuHPI GGTGA 1 cut(s) 605
AsuII TTCGAA 2 cut(s) 1120, 1264
AxyI CCTNAGG 3 cut(s) 57, 1590, 1621
BaeI ACNNNNGTAYC 2 cut(s) 1466, 1499
BanI GGYRCC 1 cut(s) 599
BbsI GAAGAC 1 cut(s) 1626
Bbv12I GWGCWC 1 cut(s) 834
BbvI GCAGC 2 cut(s) 924, 1343
BccI CCATC 4 cut(s) 590, 943, 1085, 1745
BcgI CGANNNNNNTGC 2 cut(s) 11, 45
BciT130I CCWGG 3 cut(s) 429, 1043, 1784
BciVI GTATCC 1 cut(s) 435
BcoDI GTCTC 2 cut(s) 80, 1014
BcuI ACTAGT 2 cut(s) 965, 1145
BfaI CTAG 6 cut(s) 296, 410, 435, 966, 1146, 1779
BfmI CTRYAG 1 cut(s) 468
BfrI CTTAAG 1 cut(s) 128
BfuAI ACCTGC 1 cut(s) 1445
BfuI GTATCC 1 cut(s) 435
BglII AGATCT 1 cut(s) 1000
BisI GCNGC 2 cut(s) 938, 1357
BlsI GCNGC 2 cut(s) 939, 1358
Bme1390I CCNGG 3 cut(s) 429, 1043, 1784
BmgBI CACGTC 1 cut(s) 1789
BmgT120I GGNCC 1 cut(s) 124
BmiI GGNNCC 1 cut(s) 601
BmrFI CCNGG 3 cut(s) 429, 1043, 1784
BmsI GCATC 6 cut(s) 42, 190, 396, 519, 893, 1474
BpiI GAAGAC 1 cut(s) 1626
BpmI CTGGAG 2 cut(s) 1073, 1463
Bpu10I CCTNAGC 2 cut(s) 1280, 1506
Bpu14I TTCGAA 2 cut(s) 1120, 1264
BpuEI CTTGAG 6 cut(s) 104, 1150, 1532, 1727, 1793, 1794
BsaJI CCNNGG 4 cut(s) 189, 360, 1041, 1289
BsaXI ACNNNNNCTCC 2 cut(s) 1064, 1094
Bsc4I CCNNNNNNNGG 4 cut(s) 133, 515, 990, 1223
Bse118I RCCGGY 1 cut(s) 1450
Bse1I ACTGG 2 cut(s) 1056, 1480
Bse21I CCTNAGG 3 cut(s) 57, 1590, 1621
Bse3DI GCAATG 1 cut(s) 89
BseBI CCWGG 3 cut(s) 429, 1043, 1784
BseDI CCNNGG 4 cut(s) 189, 360, 1041, 1289
BseGI GGATG 3 cut(s) 228, 280, 1096
BseLI CCNNNNNNNGG 4 cut(s) 133, 515, 990, 1223
BseMI GCAATG 1 cut(s) 89
BseMII CTCAG 9 cut(s) 62, 339, 347, 1008, 1271, 1497, 1604, 1635, 1664
BseNI ACTGG 2 cut(s) 1056, 1480
BseRI GAGGAG 2 cut(s) 882, 1578
BseXI GCAGC 2 cut(s) 924, 1343
BseYI CCCAGC 1 cut(s) 133
BsgI GTGCAG 4 cut(s) 600, 1126, 1319, 1342
BshFI GGCC 3 cut(s) 9, 125, 1748
BshNI GGYRCC 1 cut(s) 599
BsiHKAI GWGCWC 1 cut(s) 834
BsiSI CCGG 2 cut(s) 1088, 1451
BslFI GGGAC 2 cut(s) 261, 711
BslI CCNNNNNNNGG 4 cut(s) 133, 515, 990, 1223
BsmAI GTCTC 2 cut(s) 80, 1014
BsmBI CGTCTC 1 cut(s) 1014
BsmFI GGGAC 2 cut(s) 261, 711
BsnI GGCC 3 cut(s) 9, 125, 1748
Bsp119I TTCGAA 2 cut(s) 1120, 1264
Bsp1286I GDGCHC 1 cut(s) 834
Bsp143I GATC 4 cut(s) 329, 1000, 1409, 1628
BspACI CCGC 4 cut(s) 389, 778, 1626, 1732
BspANI GGCC 3 cut(s) 9, 125, 1748
BspCNI CTCAG 9 cut(s) 61, 338, 346, 1009, 1272, 1498, 1603, 1634, 1663
BspHI TCATGA 1 cut(s) 285
BspLI GGNNCC 1 cut(s) 601
BspMAI CTGCAG 1 cut(s) 472
BspMI ACCTGC 1 cut(s) 1445
BspPI GGATC 3 cut(s) 337, 1404, 1636
BspT104I TTCGAA 2 cut(s) 1120, 1264
BspT107I GGYRCC 1 cut(s) 599
BspTI CTTAAG 1 cut(s) 128
BsrDI GCAATG 1 cut(s) 89
BsrFI RCCGGY 1 cut(s) 1450
BsrI ACTGG 2 cut(s) 1056, 1480
BssAI RCCGGY 1 cut(s) 1450
BssECI CCNNGG 4 cut(s) 189, 360, 1041, 1289
BssMI GATC 4 cut(s) 329, 1000, 1409, 1628
BssT1I CCWWGG 2 cut(s) 189, 1289
Bst2UI CCWGG 3 cut(s) 429, 1043, 1784
Bst4CI ACNGT 4 cut(s) 715, 1067, 1340, 1798
Bst6I CTCTTC 4 cut(s) 459, 621, 654, 765
BstAFI CTTAAG 1 cut(s) 128
BstBI TTCGAA 2 cut(s) 1120, 1264
BstC8I GCNNGC 4 cut(s) 34, 1452, 1615, 1806
BstDSI CCRYGG 1 cut(s) 360
BstF5I GGATG 3 cut(s) 228, 280, 1096
BstHHI GCGC 1 cut(s) 38
BstKTI GATC 4 cut(s) 332, 1003, 1412, 1631
BstMAI GTCTC 2 cut(s) 80, 1014
BstMBI GATC 4 cut(s) 329, 1000, 1409, 1628
BstMWI GCNNNNNNNGC 7 cut(s) 117, 209, 934, 1614, 1623, 1820, 1829
BstNI CCWGG 3 cut(s) 429, 1043, 1784
BstNSI RCATGY 1 cut(s) 36
BstSCI CCNGG 3 cut(s) 427, 1041, 1782
BstSFI CTRYAG 1 cut(s) 468
BstV1I GCAGC 2 cut(s) 924, 1343
BstV2I GAAGAC 1 cut(s) 1626
BstX2I RGATCY 3 cut(s) 329, 1000, 1409
BstYI RGATCY 3 cut(s) 329, 1000, 1409
Bsu36I CCTNAGG 3 cut(s) 57, 1590, 1621
BsuI GTATCC 1 cut(s) 435
BsuRI GGCC 3 cut(s) 9, 125, 1748
BtgI CCRYGG 1 cut(s) 360
BtrI CACGTC 1 cut(s) 1789
BtsCI GGATG 3 cut(s) 228, 280, 1096
BtsI GCAGTG 1 cut(s) 1331
BtsIMutI CAGTG 3 cut(s) 1049, 1331, 1336
BveI ACCTGC 1 cut(s) 1445
Cac8I GCNNGC 4 cut(s) 34, 1452, 1615, 1806
CaiI CAGNNNCTG 1 cut(s) 1703
CciI TCATGA 1 cut(s) 285
CfoI GCGC 1 cut(s) 38
Cfr10I RCCGGY 1 cut(s) 1450
Cfr13I GGNCC 1 cut(s) 124
Csp6I GTAC 2 cut(s) 600, 1483
CviAII CATG 6 cut(s) 33, 286, 682, 918, 1084, 1562
CviQI GTAC 2 cut(s) 600, 1483
DpnI GATC 4 cut(s) 331, 1002, 1411, 1630
DpnII GATC 4 cut(s) 329, 1000, 1409, 1628
Eam1104I CTCTTC 4 cut(s) 459, 621, 654, 765
EarI CTCTTC 4 cut(s) 459, 621, 654, 765
EciI GGCGGA 2 cut(s) 1641, 1721
Eco130I CCWWGG 2 cut(s) 189, 1289
Eco147I AGGCCT 1 cut(s) 9
Eco57I CTGAAG 2 cut(s) 422, 926
Eco81I CCTNAGG 3 cut(s) 57, 1590, 1621
EcoO109I RGGNCCY 1 cut(s) 124
EcoRI GAATTC 2 cut(s) 349, 1153
EcoRII CCWGG 3 cut(s) 427, 1041, 1782
EcoT14I CCWWGG 2 cut(s) 189, 1289
ErhI CCWWGG 2 cut(s) 189, 1289
Esp3I CGTCTC 1 cut(s) 1014
FaeI CATG 6 cut(s) 36, 289, 685, 921, 1087, 1565
FalI AAGNNNNNCTT 2 cut(s) 357, 389
FaqI GGGAC 2 cut(s) 261, 711
FatI CATG 6 cut(s) 32, 285, 681, 917, 1083, 1561
FauI CCCGC 1 cut(s) 771
FblI GTMKAC 1 cut(s) 1525
Fnu4HI GCNGC 2 cut(s) 938, 1357
FokI GGATG 3 cut(s) 235, 287, 1103
Fsp4HI GCNGC 2 cut(s) 938, 1357
FspBI CTAG 6 cut(s) 296, 410, 435, 966, 1146, 1779
FspI TGCGCA 1 cut(s) 37
GlaI GCGC 1 cut(s) 37
GluI GCNGC 2 cut(s) 938, 1357
GsaI CCCAGC 1 cut(s) 137
GsuI CTGGAG 2 cut(s) 1073, 1463
HaeIII GGCC 3 cut(s) 9, 125, 1748
HapII CCGG 2 cut(s) 1088, 1451
HhaI GCGC 1 cut(s) 38
Hin1II CATG 6 cut(s) 36, 289, 685, 921, 1087, 1565
Hin6I GCGC 1 cut(s) 36
HinP1I GCGC 1 cut(s) 36
HincII GTYRAC 3 cut(s) 322, 711, 718
HindII GTYRAC 3 cut(s) 322, 711, 718
HindIII AAGCTT 2 cut(s) 926, 1812
HpaI GTTAAC 2 cut(s) 711, 718
HpaII CCGG 2 cut(s) 1088, 1451
HphI GGTGA 1 cut(s) 605
Hpy166II GTNNAC 6 cut(s) 322, 711, 718, 788, 821, 1526
Hpy8I GTNNAC 6 cut(s) 322, 711, 718, 788, 821, 1526
HpyAV CCTTC 5 cut(s) 220, 475, 866, 1127, 1271
HpyCH4III ACNGT 4 cut(s) 715, 1067, 1340, 1798
HpyCH4IV ACGT 3 cut(s) 158, 793, 1788
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 209, 934, 1614, 1623, 1820, 1829
HpySE526I ACGT 3 cut(s) 158, 793, 1788
Hsp92II CATG 6 cut(s) 36, 289, 685, 921, 1087, 1565
HspAI GCGC 1 cut(s) 36
KpnI GGTACC 1 cut(s) 603
KroI GCCGGC 1 cut(s) 1450
KroNI GCCGGC 1 cut(s) 1452
KspAI GTTAAC 2 cut(s) 711, 718
Kzo9I GATC 4 cut(s) 329, 1000, 1409, 1628
LmnI GCTCC 2 cut(s) 895, 1687
Lsp1109I GCAGC 2 cut(s) 924, 1343
LweI GCATC 6 cut(s) 42, 190, 396, 519, 893, 1474
MaeI CTAG 6 cut(s) 296, 410, 435, 966, 1146, 1779
MaeII ACGT 3 cut(s) 158, 793, 1788
MaeIII GTNAC 5 cut(s) 184, 618, 1061, 1067, 1658
MalI GATC 4 cut(s) 331, 1002, 1411, 1630
MboI GATC 4 cut(s) 329, 1000, 1409, 1628
MflI RGATCY 3 cut(s) 329, 1000, 1409
MhlI GDGCHC 1 cut(s) 834
MluCI AATT 9 cut(s) 349, 369, 811, 955, 1153, 1347, 1435, 1445, 1670
MlyI GAGTC 5 cut(s) 40, 248, 445, 1292, 1394
MmeI TCCRAC 1 cut(s) 675
MroNI GCCGGC 1 cut(s) 1450
MroXI GAANNNNTTC 3 cut(s) 369, 759, 846
MseI TTAA 5 cut(s) 129, 534, 710, 717, 815
MslI CAYNNNNRTG 1 cut(s) 576
MspCI CTTAAG 1 cut(s) 128
MspI CCGG 2 cut(s) 1088, 1451
MspR9I CCNGG 3 cut(s) 429, 1043, 1784
MvaI CCWGG 3 cut(s) 429, 1043, 1784
MwoI GCNNNNNNNGC 7 cut(s) 117, 209, 934, 1614, 1623, 1820, 1829
NaeI GCCGGC 1 cut(s) 1452
NdeII GATC 4 cut(s) 329, 1000, 1409, 1628
NgoMIV GCCGGC 1 cut(s) 1450
NlaIII CATG 6 cut(s) 36, 289, 685, 921, 1087, 1565
NlaIV GGNNCC 1 cut(s) 601
NmuCI GTSAC 3 cut(s) 618, 1061, 1067
NsbI TGCGCA 1 cut(s) 37
NspI RCATGY 1 cut(s) 36
NspV TTCGAA 2 cut(s) 1120, 1264
OliI CACNNNNGTG 1 cut(s) 576
PaeI GCATGC 1 cut(s) 36
PagI TCATGA 1 cut(s) 285
PceI AGGCCT 1 cut(s) 9
PdiI GCCGGC 1 cut(s) 1452
PdmI GAANNNNTTC 3 cut(s) 369, 759, 846
PflMI CCANNNNNTGG 3 cut(s) 515, 990, 1223
PfoI TCCNGGA 1 cut(s) 427
PkrI GCNGC 2 cut(s) 939, 1358
PleI GAGTC 5 cut(s) 40, 247, 445, 1292, 1394
PpsI GAGTC 5 cut(s) 40, 247, 445, 1292, 1394
Psp6I CCWGG 3 cut(s) 427, 1041, 1782
PspFI CCCAGC 1 cut(s) 133
PspGI CCWGG 3 cut(s) 427, 1041, 1782
PspN4I GGNNCC 1 cut(s) 601
PspPI GGNCC 1 cut(s) 124
PstI CTGCAG 1 cut(s) 472
PstNI CAGNNNCTG 1 cut(s) 1703
PsuI RGATCY 3 cut(s) 329, 1000, 1409
RsaI GTAC 2 cut(s) 601, 1484
RsaNI GTAC 2 cut(s) 600, 1483
RseI CAYNNNNRTG 1 cut(s) 576
SaqAI TTAA 5 cut(s) 129, 534, 710, 717, 815
SatI GCNGC 2 cut(s) 938, 1357
Sau3AI GATC 4 cut(s) 329, 1000, 1409, 1628
Sau96I GGNCC 1 cut(s) 124
SchI GAGTC 5 cut(s) 40, 248, 445, 1292, 1394
ScrFI CCNGG 3 cut(s) 429, 1043, 1784
SduI GDGCHC 1 cut(s) 834
SfaNI GCATC 6 cut(s) 42, 190, 396, 519, 893, 1474
SfcI CTRYAG 1 cut(s) 468
SfuI TTCGAA 2 cut(s) 1120, 1264
SmiMI CAYNNNNRTG 1 cut(s) 576
SmlI CTYRAG 7 cut(s) 83, 128, 1165, 1511, 1742, 1772, 1809
SmoI CTYRAG 7 cut(s) 83, 128, 1165, 1511, 1742, 1772, 1809
SpeI ACTAGT 2 cut(s) 965, 1145
SphI GCATGC 1 cut(s) 36
Sse9I AATT 9 cut(s) 349, 369, 811, 955, 1153, 1347, 1435, 1445, 1670
SseBI AGGCCT 1 cut(s) 9
SsiI CCGC 4 cut(s) 389, 778, 1626, 1732
SspI AATATT 1 cut(s) 847
SspMI CTAG 6 cut(s) 296, 410, 435, 966, 1146, 1779
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 3 cut(s) 427, 1041, 1782
StyI CCWWGG 2 cut(s) 189, 1289
TaaI ACNGT 4 cut(s) 715, 1067, 1340, 1798
TaiI ACGT 3 cut(s) 161, 796, 1791
TaqI TCGA 6 cut(s) 21, 237, 668, 763, 1120, 1264
TasI AATT 9 cut(s) 349, 369, 811, 955, 1153, 1347, 1435, 1445, 1670
Tru1I TTAA 5 cut(s) 129, 534, 710, 717, 815
Tru9I TTAA 5 cut(s) 129, 534, 710, 717, 815
TscAI CASTG 3 cut(s) 1056, 1338, 1343
TseFI GTSAC 3 cut(s) 618, 1061, 1067
TseI GCWGC 2 cut(s) 937, 1356
Tsp45I GTSAC 3 cut(s) 618, 1061, 1067
TspDTI ATGAA 3 cut(s) 239, 291, 678
TspRI CASTG 3 cut(s) 1056, 1338, 1343
Van91I CCANNNNNTGG 3 cut(s) 515, 990, 1223
Vha464I CTTAAG 1 cut(s) 128
XapI RAATTY 4 cut(s) 349, 369, 811, 1153
XceI RCATGY 1 cut(s) 36
XmiI GTMKAC 1 cut(s) 1525
XmnI GAANNNNTTC 3 cut(s) 369, 759, 846
XspI CTAG 6 cut(s) 296, 410, 435, 966, 1146, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.