Rmu_sc0000091.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000091.1
Physical Location & Seq
Forward (+)
1 .. 1472
1472 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000091.1_g000001.1.cds

Sequence Viewer

Length: 1472 bp
tgttggatgatgtttggactgaagatcaagatgactgggacaaactaagacctttgtttagacgaggtgttgatggatgcagaatcattatcacttcccgcaataaaaaaatcccattcatgatggactccctaacttcggcatactatttaaagggtttggtggaggatgactgctgggcttggttcaagcaacgggcttttggacgaggagaagaagagaagtatcccgacctctgcctgattggaaagcagattgcaaagaaatgtgggggtgtaccattagcagccaaaagtttgggaagtgttatgcgctttaaaagagaagaacggcaatggttgtttatgcaaaatagtgaactttgggaagtagatggatgcaaacagagaattttacctgcgcttatgttaagttatcttcatctgccagcacatcttcgacaatgctttgcattctgctccatatttcctaaaaattatgaattcaagaagcataaattagttctcttgtggatggcagagggcttaattctagaagaaggtagcaagcgacccgaagacattggtgatgaatacttttctgatttgctgtggatgtctttctttcaagaagtagagttacgtgatggtggtagcacaattggatacaaaatgaatgatgtcattcatgatcttgcacgatatgtttctggaaatgaatccgttatgcttgaacaaggtcttccaccaagtaatccagcacaaattcgccgctcatccattatttataaatacagggaagttacaattccagaagctctctttgaagcagaacatttacgaactgtcttattgattggagaatatggacttctaaaagacagtagtaaaatgttattaaattgtatatacctgcgtgtgctggacttgaacaactgtgatgttcattttttgccgtcatcaataggtgggttgatatgtttgaggtatctcgacttgtcttatacgcctatctccaagttgccggcaaccacaaggaatctctgttcattgcagactttaaacctctctggatgtcataatcttagagtcttgcgagactttgaagcaatgaccagcctaagacatctcaatataactggatgtgatagcttgtggtatatatctccttgtattaaaatgttacttcaacttcagacactgccattatatttcgttcgcaagaatcccggtaatcttggtgcactagagaatttgaatctttatggggagttgaatattacacacttggagaatataagaaatgcaactggagctcaatcatctggactgaagatgaaagaaaatcttgagtcgttgggattatgttggggagattttgaagatgtgaacgacaggaaaaaatcattgaagaaactagccaagtccccagccaaaaggttttttttagaagcaggggtacggtggcatacgataggaataaatcactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

489

Amino Acids

56.25

Weight (kDa)

8.1

Isoelectric Point (pI)

53.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 767
Acc36I ACCTGC 2 cut(s) 405, 899
AccBSI CCGCTC 1 cut(s) 752
AciI CCGC 2 cut(s) 99, 750
AcsI RAATTY 4 cut(s) 389, 481, 743, 1230
AcuI CTGAAG 3 cut(s) 41, 1156, 1330
AfaI GTAC 2 cut(s) 278, 1439
AfiI CCNNNNNNNGG 1 cut(s) 138
AloI GAACNNNNNNTCC 2 cut(s) 1008, 1040
AluBI AGCT 3 cut(s) 796, 1130, 1294
AluI AGCT 3 cut(s) 796, 1130, 1294
Alw21I GWGCWC 2 cut(s) 1224, 1296
Alw26I GTCTC 1 cut(s) 1070
Alw44I GTGCAC 1 cut(s) 1220
AlwNI CAGNNNCTG 1 cut(s) 1179
ApaLI GTGCAC 1 cut(s) 1220
ApeKI GCWGC 1 cut(s) 286
ApoI RAATTY 4 cut(s) 389, 481, 743, 1230
AspLEI GCGC 2 cut(s) 314, 402
AsuC2I CCSGG 1 cut(s) 1208
AsuHPI GGTGA 1 cut(s) 577
BaeGI GKGCMC 1 cut(s) 1224
BanII GRGCYC 1 cut(s) 1296
BarI GAAGNNNNNNTAC 4 cut(s) 602, 634, 1421, 1453
BbsI GAAGAC 2 cut(s) 563, 712
Bbv12I GWGCWC 2 cut(s) 1224, 1296
BbvI GCAGC 1 cut(s) 298
BccI CCATC 5 cut(s) 67, 117, 367, 507, 619
BceAI ACGGC 2 cut(s) 346, 918
BciVI GTATCC 2 cut(s) 236, 637
BcnI CCSGG 1 cut(s) 1208
BcoDI GTCTC 1 cut(s) 1070
BfaI CTAG 3 cut(s) 532, 1225, 1396
BfuAI ACCTGC 2 cut(s) 405, 899
BfuI GTATCC 2 cut(s) 236, 637
BisI GCNGC 2 cut(s) 287, 750
BlsI GCNGC 2 cut(s) 288, 751
Bme1390I CCNGG 1 cut(s) 1208
BmrFI CCNGG 1 cut(s) 1208
BmrI ACTGGG 1 cut(s) 45
BmsI GCATC 2 cut(s) 67, 367
BmuI ACTGGG 1 cut(s) 45
BpiI GAAGAC 2 cut(s) 563, 712
BpmI CTGGAG 1 cut(s) 1310
BpuEI CTTGAG 1 cut(s) 1348
BpuMI CCSGG 1 cut(s) 1208
BsaAI YACGTR 1 cut(s) 622
Bsc4I CCNNNNNNNGG 1 cut(s) 138
Bse118I RCCGGY 1 cut(s) 1002
Bse1I ACTGG 3 cut(s) 40, 1122, 1293
Bse3DI GCAATG 3 cut(s) 340, 1027, 1094
BseGI GGATG 9 cut(s) 12, 82, 174, 382, 518, 599, 754, 1057, 1126
BseLI CCNNNNNNNGG 1 cut(s) 138
BseMI GCAATG 3 cut(s) 340, 1027, 1094
BseNI ACTGG 3 cut(s) 40, 1122, 1293
BseRI GAGGAG 1 cut(s) 224
BseSI GKGCMC 1 cut(s) 1224
BseXI GCAGC 1 cut(s) 298
BseYI CCCAGC 2 cut(s) 176, 1407
BsiHKAI GWGCWC 2 cut(s) 1224, 1296
BsiSI CCGG 2 cut(s) 1003, 1208
BslFI GGGAC 2 cut(s) 52, 1389
BslI CCNNNNNNNGG 1 cut(s) 138
BsmAI GTCTC 1 cut(s) 1070
BsmFI GGGAC 2 cut(s) 52, 1389
BsmI GAATGC 1 cut(s) 451
Bsp1286I GDGCHC 2 cut(s) 1224, 1296
Bsp143I GATC 2 cut(s) 24, 669
BspACI CCGC 2 cut(s) 99, 750
BspHI TCATGA 2 cut(s) 119, 666
BspMI ACCTGC 2 cut(s) 405, 899
BsrBI CCGCTC 1 cut(s) 752
BsrDI GCAATG 3 cut(s) 340, 1027, 1094
BsrFI RCCGGY 1 cut(s) 1002
BsrI ACTGG 3 cut(s) 40, 1122, 1293
BssAI RCCGGY 1 cut(s) 1002
BssMI GATC 2 cut(s) 24, 669
Bst4CI ACNGT 4 cut(s) 825, 862, 916, 1442
Bst6I CTCTTC 1 cut(s) 212
BstBAI YACGTR 1 cut(s) 622
BstC8I GCNNGC 3 cut(s) 428, 547, 1004
BstDEI CTNAG 3 cut(s) 46, 1063, 1099
BstF5I GGATG 9 cut(s) 12, 82, 174, 382, 518, 599, 754, 1057, 1126
BstHHI GCGC 2 cut(s) 314, 402
BstKTI GATC 2 cut(s) 27, 672
BstMAI GTCTC 1 cut(s) 1070
BstMBI GATC 2 cut(s) 24, 669
BstMWI GCNNNNNNNGC 1 cut(s) 1291
BstSCI CCNGG 1 cut(s) 1206
BstSLI GKGCMC 1 cut(s) 1224
BstV1I GCAGC 1 cut(s) 298
BstV2I GAAGAC 2 cut(s) 563, 712
BstXI CCANNNNNNTGG 1 cut(s) 297
BsuI GTATCC 2 cut(s) 236, 637
BtsCI GGATG 9 cut(s) 12, 82, 174, 382, 518, 599, 754, 1057, 1126
BtsI GCAGTG 1 cut(s) 1177
BtsIMutI CAGTG 1 cut(s) 1177
BveI ACCTGC 2 cut(s) 405, 899
Cac8I GCNNGC 3 cut(s) 428, 547, 1004
CaiI CAGNNNCTG 1 cut(s) 1179
CciI TCATGA 2 cut(s) 119, 666
CfoI GCGC 2 cut(s) 314, 402
Cfr10I RCCGGY 1 cut(s) 1002
Csp6I GTAC 2 cut(s) 277, 1438
CviAII CATG 2 cut(s) 120, 667
CviQI GTAC 2 cut(s) 277, 1438
DdeI CTNAG 3 cut(s) 46, 1063, 1099
DpnI GATC 2 cut(s) 26, 671
DpnII GATC 2 cut(s) 24, 669
DraI TTTAAA 3 cut(s) 152, 318, 1040
Eam1104I CTCTTC 1 cut(s) 212
EarI CTCTTC 1 cut(s) 212
Ecl136II GAGCTC 1 cut(s) 1294
Eco24I GRGCYC 1 cut(s) 1296
Eco53kI GAGCTC 1 cut(s) 1294
Eco57I CTGAAG 3 cut(s) 41, 1156, 1330
EcoICRI GAGCTC 1 cut(s) 1294
EcoRI GAATTC 1 cut(s) 481
EcoT38I GRGCYC 1 cut(s) 1296
FaeI CATG 2 cut(s) 123, 670
FalI AAGNNNNNCTT 2 cut(s) 1310, 1342
FaqI GGGAC 2 cut(s) 52, 1389
FatI CATG 2 cut(s) 119, 666
FauI CCCGC 1 cut(s) 106
Fnu4HI GCNGC 2 cut(s) 287, 750
FokI GGATG 9 cut(s) 19, 89, 181, 389, 525, 606, 741, 1064, 1133
FriOI GRGCYC 1 cut(s) 1296
Fsp4HI GCNGC 2 cut(s) 287, 750
FspBI CTAG 3 cut(s) 532, 1225, 1396
GlaI GCGC 2 cut(s) 313, 401
GluI GCNGC 2 cut(s) 287, 750
GsaI CCCAGC 2 cut(s) 180, 1411
GsuI CTGGAG 1 cut(s) 1310
HapII CCGG 2 cut(s) 1003, 1208
HhaI GCGC 2 cut(s) 314, 402
Hin1II CATG 2 cut(s) 123, 670
Hin6I GCGC 2 cut(s) 312, 400
HinP1I GCGC 2 cut(s) 312, 400
HinfI GANTC 8 cut(s) 83, 127, 697, 1017, 1067, 1203, 1236, 1330
HpaII CCGG 2 cut(s) 1003, 1208
HphI GGTGA 1 cut(s) 577
Hpy166II GTNNAC 4 cut(s) 277, 358, 1222, 1368
Hpy188I TCNGA 2 cut(s) 582, 1175
Hpy8I GTNNAC 4 cut(s) 277, 358, 1222, 1368
HpyAV CCTTC 1 cut(s) 532
HpyCH4III ACNGT 4 cut(s) 825, 862, 916, 1442
HpyCH4IV ACGT 1 cut(s) 621
HpyCH4V TGCA 9 cut(s) 80, 259, 348, 380, 451, 676, 1032, 1222, 1285
HpyF10VI GCNNNNNNNGC 1 cut(s) 1291
HpyF3I CTNAG 3 cut(s) 46, 1063, 1099
HpySE526I ACGT 1 cut(s) 621
Hsp92II CATG 2 cut(s) 123, 670
HspAI GCGC 2 cut(s) 312, 400
KroI GCCGGC 1 cut(s) 1002
KroNI GCCGGC 1 cut(s) 1004
Kzo9I GATC 2 cut(s) 24, 669
LmnI GCTCC 2 cut(s) 463, 1291
Lsp1109I GCAGC 1 cut(s) 298
LweI GCATC 2 cut(s) 67, 367
MaeI CTAG 3 cut(s) 532, 1225, 1396
MaeII ACGT 1 cut(s) 621
MaeIII GTNAC 3 cut(s) 617, 780, 1160
MalI GATC 2 cut(s) 26, 671
MbiI CCGCTC 1 cut(s) 752
MboI GATC 2 cut(s) 24, 669
MfeI CAATTG 1 cut(s) 638
MhlI GDGCHC 2 cut(s) 1224, 1296
MlyI GAGTC 3 cut(s) 121, 1076, 1339
MnlI CCTC 7 cut(s) 58, 159, 202, 244, 513, 956, 1054
MroNI GCCGGC 1 cut(s) 1002
MseI TTAA 7 cut(s) 151, 317, 409, 526, 877, 1039, 1154
MspI CCGG 2 cut(s) 1003, 1208
MspR9I CCNGG 1 cut(s) 1208
MunI CAATTG 1 cut(s) 638
Mva1269I GAATGC 1 cut(s) 451
MwoI GCNNNNNNNGC 1 cut(s) 1291
NaeI GCCGGC 1 cut(s) 1004
NciI CCSGG 1 cut(s) 1208
NdeII GATC 2 cut(s) 24, 669
NgoMIV GCCGGC 1 cut(s) 1002
NlaIII CATG 2 cut(s) 123, 670
PagI TCATGA 2 cut(s) 119, 666
PctI GAATGC 1 cut(s) 451
PdiI GCCGGC 1 cut(s) 1004
PfeI GAWTC 5 cut(s) 83, 697, 1017, 1203, 1236
PkrI GCNGC 2 cut(s) 288, 751
PleI GAGTC 3 cut(s) 121, 1075, 1338
PpsI GAGTC 3 cut(s) 121, 1075, 1338
Ppu21I YACGTR 1 cut(s) 622
PsiI TTATAA 1 cut(s) 767
Psp124BI GAGCTC 1 cut(s) 1296
PspFI CCCAGC 2 cut(s) 176, 1407
PstNI CAGNNNCTG 1 cut(s) 1179
RsaI GTAC 2 cut(s) 278, 1439
RsaNI GTAC 2 cut(s) 277, 1438
SacI GAGCTC 1 cut(s) 1296
SaqAI TTAA 7 cut(s) 151, 317, 409, 526, 877, 1039, 1154
SatI GCNGC 2 cut(s) 287, 750
Sau3AI GATC 2 cut(s) 24, 669
SchI GAGTC 3 cut(s) 121, 1076, 1339
ScrFI CCNGG 1 cut(s) 1208
SduI GDGCHC 2 cut(s) 1224, 1296
SfaNI GCATC 2 cut(s) 67, 367
SmlI CTYRAG 1 cut(s) 1327
SmoI CTYRAG 1 cut(s) 1327
SsiI CCGC 2 cut(s) 99, 750
SspI AATATT 1 cut(s) 1257
SspMI CTAG 3 cut(s) 532, 1225, 1396
SstI GAGCTC 1 cut(s) 1296
StyD4I CCNGG 1 cut(s) 1206
TaaI ACNGT 4 cut(s) 825, 862, 916, 1442
TaiI ACGT 1 cut(s) 624
TaqI TCGA 2 cut(s) 438, 971
TauI GCSGC 1 cut(s) 752
TfiI GAWTC 5 cut(s) 83, 697, 1017, 1203, 1236
Tru1I TTAA 7 cut(s) 151, 317, 409, 526, 877, 1039, 1154
Tru9I TTAA 7 cut(s) 151, 317, 409, 526, 877, 1039, 1154
TscAI CASTG 1 cut(s) 1184
TseI GCWGC 1 cut(s) 286
TspGWI ACGGA 1 cut(s) 690
TspRI CASTG 1 cut(s) 1184
VneI GTGCAC 1 cut(s) 1220
XapI RAATTY 4 cut(s) 389, 481, 743, 1230
XbaI TCTAGA 1 cut(s) 531
XspI CTAG 3 cut(s) 532, 1225, 1396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.