Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 515 |
| Acc36I | ACCTGC | 1 cut(s) | 1313 |
| AccB1I | GGYRCC | 1 cut(s) | 1351 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 378 |
| AccII | CGCG | 1 cut(s) | 1037 |
| AciI | CCGC | 5 cut(s) | 76, 355, 488, 679, 1344 |
| AclWI | GGATC | 1 cut(s) | 498 |
| AcsI | RAATTY | 5 cut(s) | 60, 527, 586, 715, 986 |
| AcuI | CTGAAG | 1 cut(s) | 381 |
| AcyI | GRCGYC | 1 cut(s) | 606 |
| AfaI | GTAC | 4 cut(s) | 93, 196, 548, 756 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 378, 1386, 1401 |
| AflIII | ACRYGT | 2 cut(s) | 822, 1245 |
| AgsI | TTSAA | 8 cut(s) | 65, 172, 292, 586, 772, 985, 1262, 1436 |
| AhlI | ACTAGT | 1 cut(s) | 707 |
| AluBI | AGCT | 3 cut(s) | 1011, 1033, 1049 |
| AluI | AGCT | 3 cut(s) | 1011, 1033, 1049 |
| Alw21I | GWGCWC | 1 cut(s) | 1035 |
| AlwI | GGATC | 1 cut(s) | 498 |
| Ama87I | CYCGRG | 1 cut(s) | 937 |
| AoxI | GGCC | 2 cut(s) | 4, 1173 |
| ApeKI | GCWGC | 1 cut(s) | 692 |
| ApoI | RAATTY | 5 cut(s) | 60, 527, 586, 715, 986 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1323, 1355 |
| AseI | ATTAAT | 1 cut(s) | 1110 |
| AspLEI | GCGC | 1 cut(s) | 1207 |
| AspS9I | GGNCC | 2 cut(s) | 4, 1174 |
| AsuC2I | CCSGG | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 2 cut(s) | 147, 1333 |
| AsuII | TTCGAA | 1 cut(s) | 211 |
| AvaI | CYCGRG | 1 cut(s) | 937 |
| BanI | GGYRCC | 1 cut(s) | 1351 |
| BanII | GRGCYC | 2 cut(s) | 110, 1035 |
| BbsI | GAAGAC | 2 cut(s) | 387, 1248 |
| Bbv12I | GWGCWC | 1 cut(s) | 1035 |
| BbvI | GCAGC | 1 cut(s) | 679 |
| BccI | CCATC | 3 cut(s) | 231, 324, 851 |
| BceAI | ACGGC | 1 cut(s) | 335 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1170, 1204 |
| BclI | TGATCA | 1 cut(s) | 433 |
| BcnI | CCSGG | 1 cut(s) | 111 |
| BcuI | ACTAGT | 1 cut(s) | 707 |
| BfaI | CTAG | 1 cut(s) | 708 |
| BfmI | CTRYAG | 1 cut(s) | 1179 |
| BfuAI | ACCTGC | 1 cut(s) | 1313 |
| BisI | GCNGC | 1 cut(s) | 693 |
| BlsI | GCNGC | 1 cut(s) | 694 |
| BmcAI | AGTACT | 1 cut(s) | 93 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmeT110I | CYCGRG | 1 cut(s) | 937 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 1174 |
| BmiI | GGNNCC | 3 cut(s) | 70, 1176, 1353 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmsI | GCATC | 2 cut(s) | 1090, 1255 |
| BpiI | GAAGAC | 2 cut(s) | 387, 1248 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1203, 1235 |
| BpmI | CTGGAG | 1 cut(s) | 1033 |
| Bpu14I | TTCGAA | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 1 cut(s) | 10 |
| BpuMI | CCSGG | 1 cut(s) | 111 |
| BsaHI | GRCGYC | 1 cut(s) | 606 |
| BsaJI | CCNNGG | 3 cut(s) | 109, 263, 1347 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 673, 703, 1294, 1324 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 378, 1386, 1401 |
| Bse1I | ACTGG | 1 cut(s) | 1445 |
| Bse3DI | GCAATG | 3 cut(s) | 383, 931, 1316 |
| BseDI | CCNNGG | 3 cut(s) | 109, 263, 1347 |
| BseGI | GGATG | 4 cut(s) | 215, 242, 273, 1105 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 378, 1386, 1401 |
| BseMI | GCAATG | 3 cut(s) | 383, 931, 1316 |
| BseMII | CTCAG | 4 cut(s) | 197, 1049, 1199, 1356 |
| BseNI | ACTGG | 1 cut(s) | 1445 |
| BseRI | GAGGAG | 1 cut(s) | 892 |
| BseXI | GCAGC | 1 cut(s) | 679 |
| Bsh1236I | CGCG | 1 cut(s) | 1037 |
| BshFI | GGCC | 2 cut(s) | 6, 1175 |
| BshNI | GGYRCC | 1 cut(s) | 1351 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1035 |
| BsiHKCI | CYCGRG | 1 cut(s) | 937 |
| BsiSI | CCGG | 2 cut(s) | 111, 1358 |
| BslFI | GGGAC | 4 cut(s) | 386, 766, 1234, 1403 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 378, 1386, 1401 |
| BsmFI | GGGAC | 4 cut(s) | 386, 766, 1234, 1403 |
| BsnI | GGCC | 2 cut(s) | 6, 1175 |
| BsoBI | CYCGRG | 1 cut(s) | 937 |
| Bsp119I | TTCGAA | 1 cut(s) | 211 |
| Bsp1286I | GDGCHC | 2 cut(s) | 110, 1035 |
| Bsp143I | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| Bsp68I | TCGCGA | 1 cut(s) | 1037 |
| BspACI | CCGC | 5 cut(s) | 76, 355, 488, 679, 1344 |
| BspANI | GGCC | 2 cut(s) | 6, 1175 |
| BspCNI | CTCAG | 4 cut(s) | 196, 1050, 1200, 1357 |
| BspFNI | CGCG | 1 cut(s) | 1037 |
| BspLI | GGNNCC | 3 cut(s) | 70, 1176, 1353 |
| BspMAI | CTGCAG | 1 cut(s) | 1183 |
| BspMI | ACCTGC | 1 cut(s) | 1313 |
| BspPI | GGATC | 1 cut(s) | 498 |
| BspQI | GCTCTTC | 1 cut(s) | 1023 |
| BspT104I | TTCGAA | 1 cut(s) | 211 |
| BspT107I | GGYRCC | 1 cut(s) | 1351 |
| BsrDI | GCAATG | 3 cut(s) | 383, 931, 1316 |
| BsrI | ACTGG | 1 cut(s) | 1445 |
| BssECI | CCNNGG | 3 cut(s) | 109, 263, 1347 |
| BssMI | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| BssNI | GRCGYC | 1 cut(s) | 606 |
| BssT1I | CCWWGG | 2 cut(s) | 263, 1347 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 91 |
| Bst6I | CTCTTC | 2 cut(s) | 1023, 1165 |
| BstACI | GRCGYC | 1 cut(s) | 606 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1415 |
| BstBI | TTCGAA | 1 cut(s) | 211 |
| BstC8I | GCNNGC | 2 cut(s) | 1035, 1183 |
| BstDEI | CTNAG | 6 cut(s) | 183, 520, 1050, 1058, 1208, 1365 |
| BstF5I | GGATG | 4 cut(s) | 215, 242, 273, 1105 |
| BstFNI | CGCG | 1 cut(s) | 1037 |
| BstHHI | GCGC | 1 cut(s) | 1207 |
| BstKTI | GATC | 6 cut(s) | 436, 493, 814, 1006, 1041, 1158 |
| BstMBI | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1367, 1415 |
| BstNSI | RCATGY | 3 cut(s) | 728, 826, 1249 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstSFI | CTRYAG | 1 cut(s) | 1179 |
| BstUI | CGCG | 1 cut(s) | 1037 |
| BstV1I | GCAGC | 1 cut(s) | 679 |
| BstV2I | GAAGAC | 2 cut(s) | 387, 1248 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 56, 270 |
| BsuRI | GGCC | 2 cut(s) | 6, 1175 |
| BtsCI | GGATG | 4 cut(s) | 215, 242, 273, 1105 |
| BtsIMutI | CAGTG | 1 cut(s) | 1438 |
| BtuMI | TCGCGA | 1 cut(s) | 1037 |
| BveI | ACCTGC | 1 cut(s) | 1313 |
| Cac8I | GCNNGC | 2 cut(s) | 1035, 1183 |
| CfoI | GCGC | 1 cut(s) | 1207 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 1174 |
| CseI | GACGC | 2 cut(s) | 569, 595 |
| Csp6I | GTAC | 4 cut(s) | 92, 195, 547, 755 |
| CviQI | GTAC | 4 cut(s) | 92, 195, 547, 755 |
| DdeI | CTNAG | 6 cut(s) | 183, 520, 1050, 1058, 1208, 1365 |
| DpnI | GATC | 6 cut(s) | 435, 492, 813, 1005, 1040, 1157 |
| DpnII | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| DraI | TTTAAA | 1 cut(s) | 714 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 515 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 515 |
| Eam1104I | CTCTTC | 2 cut(s) | 1023, 1165 |
| EarI | CTCTTC | 2 cut(s) | 1023, 1165 |
| Ecl136II | GAGCTC | 1 cut(s) | 1033 |
| Eco130I | CCWWGG | 2 cut(s) | 263, 1347 |
| Eco24I | GRGCYC | 2 cut(s) | 110, 1035 |
| Eco32I | GATATC | 1 cut(s) | 622 |
| Eco53kI | GAGCTC | 1 cut(s) | 1033 |
| Eco57I | CTGAAG | 1 cut(s) | 381 |
| Eco88I | CYCGRG | 1 cut(s) | 937 |
| EcoICRI | GAGCTC | 1 cut(s) | 1033 |
| EcoRI | GAATTC | 1 cut(s) | 60 |
| EcoRV | GATATC | 1 cut(s) | 622 |
| EcoT14I | CCWWGG | 2 cut(s) | 263, 1347 |
| EcoT22I | ATGCAT | 2 cut(s) | 933, 1105 |
| EcoT38I | GRGCYC | 2 cut(s) | 110, 1035 |
| ErhI | CCWWGG | 2 cut(s) | 263, 1347 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 503, 535 |
| FaqI | GGGAC | 4 cut(s) | 386, 766, 1234, 1403 |
| FauNDI | CATATG | 1 cut(s) | 1085 |
| FbaI | TGATCA | 1 cut(s) | 433 |
| Fnu4HI | GCNGC | 1 cut(s) | 693 |
| FokI | GGATG | 4 cut(s) | 202, 249, 280, 1112 |
| FriOI | GRGCYC | 2 cut(s) | 110, 1035 |
| Fsp4HI | GCNGC | 1 cut(s) | 693 |
| FspBI | CTAG | 1 cut(s) | 708 |
| GlaI | GCGC | 1 cut(s) | 1206 |
| GluI | GCNGC | 1 cut(s) | 693 |
| GsuI | CTGGAG | 1 cut(s) | 1033 |
| HaeIII | GGCC | 2 cut(s) | 6, 1175 |
| HapII | CCGG | 2 cut(s) | 111, 1358 |
| HgaI | GACGC | 2 cut(s) | 569, 595 |
| HhaI | GCGC | 1 cut(s) | 1207 |
| Hin1I | GRCGYC | 1 cut(s) | 606 |
| Hin6I | GCGC | 1 cut(s) | 1205 |
| HinP1I | GCGC | 1 cut(s) | 1205 |
| HincII | GTYRAC | 1 cut(s) | 556 |
| HindII | GTYRAC | 1 cut(s) | 556 |
| HinfI | GANTC | 4 cut(s) | 330, 902, 1376, 1391 |
| HpaII | CCGG | 2 cut(s) | 111, 1358 |
| HphI | GGTGA | 2 cut(s) | 147, 1333 |
| Hpy166II | GTNNAC | 4 cut(s) | 100, 155, 197, 556 |
| Hpy188I | TCNGA | 7 cut(s) | 186, 329, 1003, 1192, 1240, 1298, 1381 |
| Hpy188III | TCNNGA | 6 cut(s) | 469, 899, 1036, 1220, 1262, 1286 |
| Hpy8I | GTNNAC | 4 cut(s) | 100, 155, 197, 556 |
| Hpy99I | CGWCG | 1 cut(s) | 563 |
| HpyAV | CCTTC | 5 cut(s) | 344, 377, 1090, 1285, 1422 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 91 |
| HpyCH4IV | ACGT | 3 cut(s) | 10, 863, 1338 |
| HpyCH4V | TGCA | 6 cut(s) | 644, 695, 931, 1103, 1181, 1418 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1367, 1415 |
| HpyF3I | CTNAG | 6 cut(s) | 183, 520, 1050, 1058, 1208, 1365 |
| HpySE526I | ACGT | 3 cut(s) | 10, 863, 1338 |
| Hsp92I | GRCGYC | 1 cut(s) | 606 |
| HspAI | GCGC | 1 cut(s) | 1205 |
| Ksp22I | TGATCA | 1 cut(s) | 433 |
| Kzo9I | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| LguI | GCTCTTC | 1 cut(s) | 1023 |
| LmnI | GCTCC | 4 cut(s) | 721, 879, 1046, 1241 |
| Lsp1109I | GCAGC | 1 cut(s) | 679 |
| LweI | GCATC | 2 cut(s) | 1090, 1255 |
| MaeI | CTAG | 1 cut(s) | 708 |
| MaeII | ACGT | 3 cut(s) | 10, 863, 1338 |
| MaeIII | GTNAC | 3 cut(s) | 85, 1120, 1339 |
| MalI | GATC | 6 cut(s) | 435, 492, 813, 1005, 1040, 1157 |
| MboI | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| MboII | GAAGA | 6 cut(s) | 387, 756, 1040, 1152, 1253, 1385 |
| MfeI | CAATTG | 1 cut(s) | 50 |
| MhlI | GDGCHC | 2 cut(s) | 110, 1035 |
| MlyI | GAGTC | 1 cut(s) | 1385 |
| MmeI | TCCRAC | 1 cut(s) | 597 |
| Mph1103I | ATGCAT | 2 cut(s) | 933, 1105 |
| MseI | TTAA | 6 cut(s) | 713, 828, 860, 1110, 1137, 1167 |
| MslI | CAYNNNNRTG | 1 cut(s) | 821 |
| MspI | CCGG | 2 cut(s) | 111, 1358 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MunI | CAATTG | 1 cut(s) | 50 |
| MvnI | CGCG | 1 cut(s) | 1037 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1367, 1415 |
| NciI | CCSGG | 1 cut(s) | 111 |
| NdeI | CATATG | 1 cut(s) | 1085 |
| NdeII | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| NlaIV | GGNNCC | 3 cut(s) | 70, 1176, 1353 |
| NmuCI | GTSAC | 1 cut(s) | 1339 |
| NruI | TCGCGA | 1 cut(s) | 1037 |
| NsiI | ATGCAT | 2 cut(s) | 933, 1105 |
| NspI | RCATGY | 3 cut(s) | 728, 826, 1249 |
| NspV | TTCGAA | 1 cut(s) | 211 |
| PciI | ACATGT | 2 cut(s) | 822, 1245 |
| PciSI | GCTCTTC | 1 cut(s) | 1023 |
| PfeI | GAWTC | 3 cut(s) | 330, 902, 1376 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 378 |
| PkrI | GCNGC | 1 cut(s) | 694 |
| PleI | GAGTC | 1 cut(s) | 1385 |
| PpsI | GAGTC | 1 cut(s) | 1385 |
| PscI | ACATGT | 2 cut(s) | 822, 1245 |
| PshBI | ATTAAT | 1 cut(s) | 1110 |
| Psp124BI | GAGCTC | 1 cut(s) | 1035 |
| PspN4I | GGNNCC | 3 cut(s) | 70, 1176, 1353 |
| PspPI | GGNCC | 2 cut(s) | 4, 1174 |
| PstI | CTGCAG | 1 cut(s) | 1183 |
| RruI | TCGCGA | 1 cut(s) | 1037 |
| RsaI | GTAC | 4 cut(s) | 93, 196, 548, 756 |
| RsaNI | GTAC | 4 cut(s) | 92, 195, 547, 755 |
| RseI | CAYNNNNRTG | 1 cut(s) | 821 |
| SacI | GAGCTC | 1 cut(s) | 1035 |
| SapI | GCTCTTC | 1 cut(s) | 1023 |
| SaqAI | TTAA | 6 cut(s) | 713, 828, 860, 1110, 1137, 1167 |
| SatI | GCNGC | 1 cut(s) | 693 |
| Sau3AI | GATC | 6 cut(s) | 433, 490, 811, 1003, 1038, 1155 |
| Sau96I | GGNCC | 2 cut(s) | 4, 1174 |
| SbfI | CCTGCAGG | 1 cut(s) | 1183 |
| ScaI | AGTACT | 1 cut(s) | 93 |
| SchI | GAGTC | 1 cut(s) | 1385 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SdaI | CCTGCAGG | 1 cut(s) | 1183 |
| SduI | GDGCHC | 2 cut(s) | 110, 1035 |
| SfaNI | GCATC | 2 cut(s) | 1090, 1255 |
| SfcI | CTRYAG | 1 cut(s) | 1179 |
| SfuI | TTCGAA | 1 cut(s) | 211 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 821 |
| SmlI | CTYRAG | 1 cut(s) | 25 |
| SmoI | CTYRAG | 1 cut(s) | 25 |
| SpeI | ACTAGT | 1 cut(s) | 707 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1183 |
| SsiI | CCGC | 5 cut(s) | 76, 355, 488, 679, 1344 |
| SspMI | CTAG | 1 cut(s) | 708 |
| SstI | GAGCTC | 1 cut(s) | 1035 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| StyI | CCWWGG | 2 cut(s) | 263, 1347 |
| TaaI | ACNGT | 2 cut(s) | 85, 91 |
| TaiI | ACGT | 3 cut(s) | 13, 866, 1341 |
| TaqI | TCGA | 7 cut(s) | 211, 444, 573, 819, 846, 1163, 1221 |
| TatI | WGTACW | 1 cut(s) | 91 |
| TfiI | GAWTC | 3 cut(s) | 330, 902, 1376 |
| Tru1I | TTAA | 6 cut(s) | 713, 828, 860, 1110, 1137, 1167 |
| Tru9I | TTAA | 6 cut(s) | 713, 828, 860, 1110, 1137, 1167 |
| TscAI | CASTG | 1 cut(s) | 1445 |
| TseFI | GTSAC | 1 cut(s) | 1339 |
| TseI | GCWGC | 1 cut(s) | 692 |
| Tsp45I | GTSAC | 1 cut(s) | 1339 |
| TspDTI | ATGAA | 4 cut(s) | 269, 454, 520, 1267 |
| TspGWI | ACGGA | 2 cut(s) | 297, 488 |
| TspRI | CASTG | 1 cut(s) | 1445 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 378 |
| VspI | ATTAAT | 1 cut(s) | 1110 |
| XapI | RAATTY | 5 cut(s) | 60, 527, 586, 715, 986 |
| XceI | RCATGY | 3 cut(s) | 728, 826, 1249 |
| XspI | CTAG | 1 cut(s) | 708 |
| ZrmI | AGTACT | 1 cut(s) | 93 |
| Zsp2I | ATGCAT | 2 cut(s) | 933, 1105 |