Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 705 |
| AciI | CCGC | 3 cut(s) | 122, 217, 969 |
| AcoI | YGGCCR | 2 cut(s) | 3, 123 |
| AcsI | RAATTY | 4 cut(s) | 407, 565, 778, 1063 |
| AfaI | GTAC | 3 cut(s) | 257, 270, 1040 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| AflII | CTTAAG | 1 cut(s) | 589 |
| AflIII | ACRYGT | 1 cut(s) | 1189 |
| AluBI | AGCT | 6 cut(s) | 225, 248, 642, 1045, 1058, 1107 |
| AluI | AGCT | 6 cut(s) | 225, 248, 642, 1045, 1058, 1107 |
| Alw21I | GWGCWC | 1 cut(s) | 227 |
| Alw26I | GTCTC | 2 cut(s) | 31, 713 |
| AoxI | GGCC | 4 cut(s) | 3, 123, 152, 984 |
| ApeKI | GCWGC | 3 cut(s) | 248, 391, 530 |
| ApoI | RAATTY | 4 cut(s) | 407, 565, 778, 1063 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 198, 230 |
| AseI | ATTAAT | 1 cut(s) | 612 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 1 cut(s) | 1219 |
| AsuII | TTCGAA | 1 cut(s) | 484 |
| BaeGI | GKGCMC | 1 cut(s) | 710 |
| BanI | GGYRCC | 1 cut(s) | 705 |
| BanII | GRGCYC | 1 cut(s) | 227 |
| BbsI | GAAGAC | 1 cut(s) | 2 |
| Bbv12I | GWGCWC | 1 cut(s) | 227 |
| BbvCI | CCTCAGC | 1 cut(s) | 1203 |
| BbvI | GCAGC | 3 cut(s) | 235, 403, 542 |
| BccI | CCATC | 2 cut(s) | 722, 746 |
| BclI | TGATCA | 1 cut(s) | 1195 |
| BcoDI | GTCTC | 2 cut(s) | 31, 713 |
| BfaI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| BfrI | CTTAAG | 1 cut(s) | 589 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 82 |
| BisI | GCNGC | 4 cut(s) | 123, 249, 392, 531 |
| BlsI | GCNGC | 4 cut(s) | 124, 250, 393, 532 |
| BmiI | GGNNCC | 1 cut(s) | 707 |
| BmsI | GCATC | 3 cut(s) | 41, 429, 956 |
| BpiI | GAAGAC | 1 cut(s) | 2 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1203 |
| Bpu14I | TTCGAA | 1 cut(s) | 484 |
| Bsa29I | ATCGAT | 1 cut(s) | 993 |
| BsaAI | YACGTR | 1 cut(s) | 1190 |
| BsaJI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| Bse118I | RCCGGY | 2 cut(s) | 5, 150 |
| Bse1I | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| BseCI | ATCGAT | 1 cut(s) | 993 |
| BseDI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| BseGI | GGATG | 3 cut(s) | 186, 927, 971 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| BseMII | CTCAG | 5 cut(s) | 170, 369, 450, 1130, 1194 |
| BseNI | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| BseSI | GKGCMC | 1 cut(s) | 710 |
| BseXI | GCAGC | 3 cut(s) | 235, 403, 542 |
| BsgI | GTGCAG | 2 cut(s) | 925, 929 |
| BshFI | GGCC | 4 cut(s) | 5, 125, 154, 986 |
| BshNI | GGYRCC | 1 cut(s) | 705 |
| BshVI | ATCGAT | 1 cut(s) | 993 |
| BsiHKAI | GWGCWC | 1 cut(s) | 227 |
| BsiSI | CCGG | 2 cut(s) | 6, 151 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| BsmAI | GTCTC | 2 cut(s) | 31, 713 |
| BsmBI | CGTCTC | 1 cut(s) | 31 |
| BsnI | GGCC | 4 cut(s) | 5, 125, 154, 986 |
| Bsp119I | TTCGAA | 1 cut(s) | 484 |
| Bsp1286I | GDGCHC | 2 cut(s) | 227, 710 |
| Bsp143I | GATC | 2 cut(s) | 103, 1195 |
| Bsp19I | CCATGG | 2 cut(s) | 126, 1118 |
| BspACI | CCGC | 3 cut(s) | 122, 217, 969 |
| BspANI | GGCC | 4 cut(s) | 5, 125, 154, 986 |
| BspCNI | CTCAG | 5 cut(s) | 169, 370, 449, 1131, 1195 |
| BspDI | ATCGAT | 1 cut(s) | 993 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 707 |
| BspQI | GCTCTTC | 1 cut(s) | 1092 |
| BspT104I | TTCGAA | 1 cut(s) | 484 |
| BspT107I | GGYRCC | 1 cut(s) | 705 |
| BspTI | CTTAAG | 1 cut(s) | 589 |
| BsrFI | RCCGGY | 2 cut(s) | 5, 150 |
| BsrI | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| BssAI | RCCGGY | 2 cut(s) | 5, 150 |
| BssECI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| BssMI | GATC | 2 cut(s) | 103, 1195 |
| BssT1I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Bst4CI | ACNGT | 2 cut(s) | 142, 542 |
| Bst6I | CTCTTC | 1 cut(s) | 1092 |
| BstAFI | CTTAAG | 1 cut(s) | 589 |
| BstBAI | YACGTR | 1 cut(s) | 1190 |
| BstBI | TTCGAA | 1 cut(s) | 484 |
| BstC8I | GCNNGC | 2 cut(s) | 152, 290 |
| BstDEI | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| BstDSI | CCRYGG | 2 cut(s) | 126, 1118 |
| BstF5I | GGATG | 3 cut(s) | 186, 927, 971 |
| BstKTI | GATC | 2 cut(s) | 106, 1198 |
| BstMAI | GTCTC | 2 cut(s) | 31, 713 |
| BstMBI | GATC | 2 cut(s) | 103, 1195 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 82, 128, 294 |
| BstNSI | RCATGY | 1 cut(s) | 605 |
| BstSLI | GKGCMC | 1 cut(s) | 710 |
| BstV1I | GCAGC | 3 cut(s) | 235, 403, 542 |
| BstV2I | GAAGAC | 1 cut(s) | 2 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 133 |
| Bsu15I | ATCGAT | 1 cut(s) | 993 |
| BsuRI | GGCC | 4 cut(s) | 5, 125, 154, 986 |
| BsuTUI | ATCGAT | 1 cut(s) | 993 |
| BtgI | CCRYGG | 2 cut(s) | 126, 1118 |
| BtsCI | GGATG | 3 cut(s) | 186, 927, 971 |
| BtsIMutI | CAGTG | 1 cut(s) | 1136 |
| Cac8I | GCNNGC | 2 cut(s) | 152, 290 |
| CciI | TCATGA | 1 cut(s) | 106 |
| Cfr10I | RCCGGY | 2 cut(s) | 5, 150 |
| ClaI | ATCGAT | 1 cut(s) | 993 |
| CseI | GACGC | 1 cut(s) | 481 |
| Csp6I | GTAC | 3 cut(s) | 256, 269, 1039 |
| CviQI | GTAC | 3 cut(s) | 256, 269, 1039 |
| DdeI | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| DpnI | GATC | 2 cut(s) | 105, 1197 |
| DpnII | GATC | 2 cut(s) | 103, 1195 |
| DraI | TTTAAA | 2 cut(s) | 924, 1215 |
| EaeI | YGGCCR | 2 cut(s) | 3, 123 |
| Eam1104I | CTCTTC | 1 cut(s) | 1092 |
| EarI | CTCTTC | 1 cut(s) | 1092 |
| Ecl136II | GAGCTC | 1 cut(s) | 225 |
| Eco130I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Eco24I | GRGCYC | 1 cut(s) | 227 |
| Eco32I | GATATC | 1 cut(s) | 699 |
| Eco53kI | GAGCTC | 1 cut(s) | 225 |
| EcoICRI | GAGCTC | 1 cut(s) | 225 |
| EcoRV | GATATC | 1 cut(s) | 699 |
| EcoT14I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| EcoT22I | ATGCAT | 1 cut(s) | 1227 |
| EcoT38I | GRGCYC | 1 cut(s) | 227 |
| ErhI | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Esp3I | CGTCTC | 1 cut(s) | 31 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1147, 1179 |
| FauNDI | CATATG | 1 cut(s) | 1221 |
| FbaI | TGATCA | 1 cut(s) | 1195 |
| Fnu4HI | GCNGC | 4 cut(s) | 123, 249, 392, 531 |
| FokI | GGATG | 3 cut(s) | 173, 914, 978 |
| FriOI | GRGCYC | 1 cut(s) | 227 |
| Fsp4HI | GCNGC | 4 cut(s) | 123, 249, 392, 531 |
| FspBI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| GluI | GCNGC | 4 cut(s) | 123, 249, 392, 531 |
| HaeIII | GGCC | 4 cut(s) | 5, 125, 154, 986 |
| HapII | CCGG | 2 cut(s) | 6, 151 |
| HgaI | GACGC | 1 cut(s) | 481 |
| HincII | GTYRAC | 1 cut(s) | 762 |
| HindII | GTYRAC | 1 cut(s) | 762 |
| HindIII | AAGCTT | 2 cut(s) | 640, 1043 |
| HinfI | GANTC | 6 cut(s) | 446, 472, 623, 681, 844, 851 |
| HpaII | CCGG | 2 cut(s) | 6, 151 |
| HphI | GGTGA | 1 cut(s) | 1219 |
| Hpy166II | GTNNAC | 4 cut(s) | 136, 258, 762, 1023 |
| Hpy188I | TCNGA | 2 cut(s) | 67, 871 |
| Hpy188III | TCNNGA | 7 cut(s) | 107, 718, 848, 963, 1007, 1094, 1151 |
| Hpy8I | GTNNAC | 4 cut(s) | 136, 258, 762, 1023 |
| HpyAV | CCTTC | 4 cut(s) | 206, 329, 720, 976 |
| HpyCH4III | ACNGT | 2 cut(s) | 142, 542 |
| HpyCH4IV | ACGT | 1 cut(s) | 1189 |
| HpyCH4V | TGCA | 7 cut(s) | 32, 251, 479, 530, 906, 946, 1225 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 82, 128, 294 |
| HpyF3I | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| HpySE526I | ACGT | 1 cut(s) | 1189 |
| KroI | GCCGGC | 1 cut(s) | 150 |
| KroNI | GCCGGC | 1 cut(s) | 152 |
| Ksp22I | TGATCA | 1 cut(s) | 1195 |
| Kzo9I | GATC | 2 cut(s) | 103, 1195 |
| LguI | GCTCTTC | 1 cut(s) | 1092 |
| LmnI | GCTCC | 1 cut(s) | 598 |
| Lsp1109I | GCAGC | 3 cut(s) | 235, 403, 542 |
| LweI | GCATC | 3 cut(s) | 41, 429, 956 |
| MaeI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| MaeII | ACGT | 1 cut(s) | 1189 |
| MaeIII | GTNAC | 4 cut(s) | 159, 604, 686, 1091 |
| MalI | GATC | 2 cut(s) | 105, 1197 |
| MboI | GATC | 2 cut(s) | 103, 1195 |
| MboII | GAAGA | 7 cut(s) | 9, 113, 498, 565, 629, 1109, 1125 |
| MhlI | GDGCHC | 2 cut(s) | 227, 710 |
| MluCI | AATT | 9 cut(s) | 61, 239, 407, 565, 609, 778, 824, 1063, 1080 |
| MlyI | GAGTC | 1 cut(s) | 481 |
| MmeI | TCCRAC | 2 cut(s) | 214, 483 |
| MnlI | CCTC | 7 cut(s) | 165, 277, 512, 642, 865, 941, 1198 |
| Mph1103I | ATGCAT | 1 cut(s) | 1227 |
| MroNI | GCCGGC | 1 cut(s) | 150 |
| MroXI | GAANNNNTTC | 1 cut(s) | 365 |
| MseI | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1214 |
| MslI | CAYNNNNRTG | 2 cut(s) | 131, 1224 |
| MspCI | CTTAAG | 1 cut(s) | 589 |
| MspI | CCGG | 2 cut(s) | 6, 151 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 82, 128, 294 |
| NaeI | GCCGGC | 1 cut(s) | 152 |
| NcoI | CCATGG | 2 cut(s) | 126, 1118 |
| NdeI | CATATG | 1 cut(s) | 1221 |
| NdeII | GATC | 2 cut(s) | 103, 1195 |
| NgoMIV | GCCGGC | 1 cut(s) | 150 |
| NlaIV | GGNNCC | 1 cut(s) | 707 |
| NmuCI | GTSAC | 3 cut(s) | 604, 686, 1091 |
| NsiI | ATGCAT | 1 cut(s) | 1227 |
| NspI | RCATGY | 1 cut(s) | 605 |
| NspV | TTCGAA | 1 cut(s) | 484 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PciSI | GCTCTTC | 1 cut(s) | 1092 |
| PdiI | GCCGGC | 1 cut(s) | 152 |
| PdmI | GAANNNNTTC | 1 cut(s) | 365 |
| PfeI | GAWTC | 5 cut(s) | 446, 623, 681, 844, 851 |
| PflFI | GACNNNGTC | 1 cut(s) | 724 |
| PkrI | GCNGC | 4 cut(s) | 124, 250, 393, 532 |
| PleI | GAGTC | 1 cut(s) | 480 |
| PpsI | GAGTC | 1 cut(s) | 480 |
| Ppu21I | YACGTR | 1 cut(s) | 1190 |
| PshBI | ATTAAT | 1 cut(s) | 612 |
| Psp124BI | GAGCTC | 1 cut(s) | 227 |
| PspN4I | GGNNCC | 1 cut(s) | 707 |
| PsyI | GACNNNGTC | 1 cut(s) | 724 |
| RsaI | GTAC | 3 cut(s) | 257, 270, 1040 |
| RsaNI | GTAC | 3 cut(s) | 256, 269, 1039 |
| RseI | CAYNNNNRTG | 2 cut(s) | 131, 1224 |
| SacI | GAGCTC | 1 cut(s) | 227 |
| SapI | GCTCTTC | 1 cut(s) | 1092 |
| SaqAI | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1214 |
| SatI | GCNGC | 4 cut(s) | 123, 249, 392, 531 |
| Sau3AI | GATC | 2 cut(s) | 103, 1195 |
| SchI | GAGTC | 1 cut(s) | 481 |
| SduI | GDGCHC | 2 cut(s) | 227, 710 |
| SfaNI | GCATC | 3 cut(s) | 41, 429, 956 |
| SfuI | TTCGAA | 1 cut(s) | 484 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 131, 1224 |
| SmlI | CTYRAG | 1 cut(s) | 589 |
| SmoI | CTYRAG | 1 cut(s) | 589 |
| Sse9I | AATT | 9 cut(s) | 61, 239, 407, 565, 609, 778, 824, 1063, 1080 |
| SsiI | CCGC | 3 cut(s) | 122, 217, 969 |
| SspMI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| SstI | GAGCTC | 1 cut(s) | 227 |
| StyI | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| TaaI | ACNGT | 2 cut(s) | 142, 542 |
| TaiI | ACGT | 1 cut(s) | 1192 |
| TaqI | TCGA | 4 cut(s) | 279, 484, 717, 993 |
| TasI | AATT | 9 cut(s) | 61, 239, 407, 565, 609, 778, 824, 1063, 1080 |
| TatI | WGTACW | 2 cut(s) | 268, 1038 |
| TauI | GCSGC | 1 cut(s) | 125 |
| TfiI | GAWTC | 5 cut(s) | 446, 623, 681, 844, 851 |
| Tru1I | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1214 |
| Tru9I | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1214 |
| TscAI | CASTG | 1 cut(s) | 1143 |
| TseFI | GTSAC | 3 cut(s) | 604, 686, 1091 |
| TseI | GCWGC | 3 cut(s) | 248, 391, 530 |
| Tsp45I | GTSAC | 3 cut(s) | 604, 686, 1091 |
| TspDTI | ATGAA | 3 cut(s) | 325, 630, 636 |
| TspGWI | ACGGA | 1 cut(s) | 359 |
| TspRI | CASTG | 1 cut(s) | 1143 |
| Tth111I | GACNNNGTC | 1 cut(s) | 724 |
| Vha464I | CTTAAG | 1 cut(s) | 589 |
| VspI | ATTAAT | 1 cut(s) | 612 |
| XapI | RAATTY | 4 cut(s) | 407, 565, 778, 1063 |
| XbaI | TCTAGA | 2 cut(s) | 847, 1006 |
| XceI | RCATGY | 1 cut(s) | 605 |
| XmnI | GAANNNNTTC | 1 cut(s) | 365 |
| XspI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| Zsp2I | ATGCAT | 1 cut(s) | 1227 |