Rorug05G0568500

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000428
Physical Location & Seq
Reverse (-)
76156363 .. 76158755
2393 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0568500.1

Sequence Viewer

Length: 2151 bp
ATGGCAATGGCTTTTACTGTATGGTTGCTTTTGCTTTCCTTATTGTTTCTCCTAGCAGTTTCTGTGTTGTCCCAAACTAATGGTAGCATAGTAGTGGGTGCTTCTCTCTCTGCAGCAGGCAACTCCTCATGGATTTCTCCATCTGGTGAATTTGTTTTTGGATTTCAGCAACTTGAAAACAGTGATAGTTTCCTGCTTTCTATATGGTTTGCCAAGATACCAGACAGAACCATAGTTTGGTACGCAAATGGAGATAGGCCTGCACCTAAGGGATCAACTGTGAACTTGACTTCCAGCAGTGGATTAGTGCTTACAACTCCTCAGGGTGAACAGCTATGGAAATCTGATCTAACCATTGCTGGCTTTGTTGCTCATGGGGTTATGAATGATGCCGGGACTATTCCAGGTAGTGAAGGTAAACGATTGGTTTTCAATGACTCTGGCAACTTCTATATTTTGCGAGTGAATGGTGGAAAATTCACTTTCACAGAGGAGGAACGCCCAGCAAGGGACTACTATCTCCGGTCAACTCTCAACTTTGATGGGGTTTTGGCTCAATATTTCCTCCCAAAGCCTTATGTTGGCAATGTAAGCTGGAAACCTCTTTGGTCAGAGCCGCCTAATATTTGCCAAAAAGTTGATTCAGGACCTGGTGTCTGTGGGAACAACAGTATCTGCACTTTGAAAGCAGATAAGAGGCCAACCTGTGAATGCCCAAGAGGATACTCTTTACTTGATCCAAACGACCCGTATGGGACCTGCAATCCAGATTTCAGACAAGACTGTGACAATGAGCTTAGTTATTCAAAAGATCTGTTTGATGTTCAGGTGCTAACAAATACTGATTGGCTTACCTCTGGGGGTAATGAGCAGTTGGATGCTTCTACTGCTGACACATGCAGTCAATCTTGCTTCCAAAATTGTTTGTGTGATGTTGCTAGTTATAGCAATGAAACCTGTTGGAAAAAGAAGTTACCTCTCACATATGGGAGAGAAGACAGTAGTCTTAATGCAAAGACCTTCATCAAATTCAGGAAGGATAATTCAACTCCACAAGTTCCTAAGATGCCAGGTTCAGATAATAAGAAGATCCGGACCACTTCGGTGCCTGTGGAATCAATTCTTCTGTTTACCTCCATCTCTCTTAATTTTATGTTTGGTGCTGCAGTTTGTTTCAGATTTTTCTTCCGTTTCCGGAAGAAACCTGCAAAGTTTACACACAGTGATTTGGAAACAAATTTGCGTTCGTTTAGTCACAAAGAGCTTGAAGAAGCTACAAATGGATTCAATGAAGAATTAGGAAAGGGTTCTTTTGGAGTTGTTTACAAAGGGATAATACAAGTTGGATCAGGTGTCGAGGTGGCAGTCAAGAAGCTCAAACGTGTGATAGAAGATGGTGAGAAGGAATTCAAGACGGAACTTAACATAATTGGCAAGACACATCACAAGAATCTGGTTCACCTGGTTGGATATTGTGATGAGGGACAGCAGCGATTACTAGTGTATGAATTCTTGAGCAATGGCACTTTAGCAAGCTTCATTTTTGGTGATGAGAAACCCAGTTGGAGGCAACGAATGGAAATTGCCTATGGTGTTGCTAGAGGGCTTCTGTACTTGCATGAAGAGTGCACCACCCAAATCATCCATTGTGATATAAAGCCTCAGAACATACTTCTGGATGATCATTACAATGCTCGGATTTCTGATTTCGGCTTGGCAAAACTTATGATGACGAATCAGAGCAAGACACACACTACCATTAAAGGGACAAAAGGGTATGTTGCACCTGAGTGGTTTAGGAACATGGCAGTCACTACCAAAGTTGATGTGTATAGCTTTGGAGTTGTACTGCTAGAGATCATTTGCTGCAGGAAAAGTGTTGATATGGAAAATAACTGTGAAGAGAAAGCAATTTTAACTGATTGGGTTTATGATTGCTACAGAGGAGGAGTATTAGAGTTGGTTCTGGATCACGAAGTCGATGCCTTGGATGGTGAAATGAAGCTGGAAGAGACTGTCAAGATTGCTCTTTGGTGTATTCAAGAAGACCCATCTCTTCGACCCACAATGAGGAAGGTTGTGCAGATGCTTGAAGGAGTGGTGGAAATACATGTTCCACCTTGTCCATCCCCATATAACAGAGCAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

716

Amino Acids

80.04

Weight (kDa)

5.78

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 429 - 697 6.6e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 430 - 695 5.7e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000428)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09331 FvH4_1g09661 FvH4_1g21942 FvH4_2g05841 FvH4_2g06090 FvH4_3g02580 FvH4_3g02591 FvH4_6g51091 FvH4_7g18893 FvH4_7g20022 FvH4_7g20111
malus_domestica MD09G1117600.v1.1 MD17G1117300.v1.1 MD17G1286200.v1.1
prunus_persica Prupe.8G124500_v2.0.a1 Prupe.8G124700_v2.0.a1 Prupe.8G124700_v2.0.a1
pyrus_communis pycom17g10120
rosa_chinensis RchiOBHm_Chr1g0354511 RchiOBHm_Chr1g0360131 RchiOBHm_Chr1g0365181 RchiOBHm_Chr1g0365201 RchiOBHm_Chr2g0096151 RchiOBHm_Chr2g0113181 RchiOBHm_Chr6g0257131 RchiOBHm_Chr6g0257771 RchiOBHm_Chr6g0265441 RchiOBHm_Chr6g0265451 RchiOBHm_Chr6g0265471 RchiOBHm_Chr6g0265481
rosa_multiflora Rmu_co8204816.1_g000001 Rmu_co8281643.1_g000001 Rmu_sc0000146.1_g000019 Rmu_sc0000217.1_g000012 Rmu_sc0001530.1_g000020 Rmu_sc0003520.1_g000002 Rmu_sc0003983.1_g000008 Rmu_sc0004419.1_g000008 Rmu_sc0004448.1_g000035 Rmu_sc0004896.1_g000001 Rmu_sc0005996.1_g000016 Rmu_sc0006683.1_g000002 Rmu_sc0007813.1_g000006 Rmu_sc0008035.1_g000004 Rmu_sc0008490.1_g000002 Rmu_sc0008742.1_g000001 Rmu_sc0010908.1_g000002 Rmu_sc0010908.1_g000007 Rmu_sc0011315.1_g000015 Rmu_sc0013544.1_g000002 Rmu_sc0014962.1_g000001 Rmu_sc0015275.1_g000003 Rmu_sc0017847.1_g000006 Rmu_sc0024070.1_g000003 Rmu_sc0040696.1_g000001 Rmu_ssc0000066.1_g000007 Rmu_ssc0000368.1_g000042
rosa_roxburghii Rroxscaffold_175G00432410 Rroxscaffold_2G00129540 Rroxscaffold_2G00146070 Rroxscaffold_6G00430280 Rroxscaffold_7G00202650 Rroxscaffold_7G00208930
rosa_rugosa Rorug01G0302700 Rorug01G0302800 Rorug02G0116400 Rorug04G0099000 Rorug05G0568500 Rorug05G0575100
rosa_samantha Rh1CG237300 Rh1CG272100 Rh1CG307500 Rh2BG009200 Rh2DG103600 Rh2DG169700 Rh2DG169800 Rh2DG248200 Rh2DG609700 Rh3AG050300 Rh5AG024900 Rh5AG025400 Rh6AG092900 Rh6BG079600 Rh6BG083600 Rh6BG137900 Rh6BG138600 Rh6BG138900 Rh6BG139000 Rh6CG136100
rosa_wichuraiana Rw1G022220 Rw2G008030 Rw2G012930 Rw5G002340 Rw6G008000 Rw6G011990 Rw6G012000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 767, 1213
AccB1I GGYRCC 1 cut(s) 1105
AccB7I CCANNNNNTGG 1 cut(s) 237
AccIII TCCGGA 2 cut(s) 1092, 1194
AciI CCGC 1 cut(s) 617
AclWI GGATC 5 cut(s) 280, 731, 1084, 1354, 1977
AcsI RAATTY 6 cut(s) 149, 476, 1028, 1237, 1406, 1508
AdeI CACNNNGTG 1 cut(s) 1223
AfaI GTAC 3 cut(s) 242, 1613, 1848
AfiI CCNNNNNNNGG 6 cut(s) 237, 508, 581, 1566, 1764, 2070
AflIII ACRYGT 2 cut(s) 1381, 2110
AhdI GACNNNNNGTC 1 cut(s) 653
AhlI ACTAGT 1 cut(s) 1498
AjnI CCWGG 4 cut(s) 403, 649, 1069, 1461
AjuI GAANNNNNNNTTGG 4 cut(s) 141, 173, 220, 252
AleI CACNNNNGTG 2 cut(s) 1103, 1789
AloI GAACNNNNNNTCC 2 cut(s) 275, 307
AluBI AGCT 9 cut(s) 334, 594, 796, 1264, 1274, 1375, 1536, 1836, 2005
AluI AGCT 9 cut(s) 334, 594, 796, 1264, 1274, 1375, 1536, 1836, 2005
Alw21I GWGCWC 1 cut(s) 1631
Alw26I GTCTC 1 cut(s) 2006
Alw44I GTGCAC 1 cut(s) 1627
AlwI GGATC 5 cut(s) 280, 731, 1084, 1354, 1977
AlwNI CAGNNNCTG 3 cut(s) 62, 650, 675
Aor13HI TCCGGA 2 cut(s) 1092, 1194
AoxI GGCC 2 cut(s) 257, 698
ApaLI GTGCAC 1 cut(s) 1627
ApeKI GCWGC 5 cut(s) 113, 1163, 1489, 1866, 2144
ApoI RAATTY 6 cut(s) 149, 476, 1028, 1237, 1406, 1508
Asp700I GAANNNNTTC 3 cut(s) 1119, 1306, 1406
AspS9I GGNCC 3 cut(s) 647, 756, 1095
AsuC2I CCSGG 1 cut(s) 394
AsuHPI GGTGA 6 cut(s) 158, 338, 1409, 1451, 1559, 2006
AvaII GGWCC 3 cut(s) 647, 756, 1095
AxyI CCTNAGG 2 cut(s) 267, 321
BaeGI GKGCMC 1 cut(s) 1631
BaeI ACNNNNGTAYC 2 cut(s) 655, 688
BanI GGYRCC 1 cut(s) 1105
BbsI GAAGAC 2 cut(s) 1002, 2052
Bbv12I GWGCWC 1 cut(s) 1631
BbvI GCAGC 4 cut(s) 125, 1150, 1501, 1853
BccI CCATC 7 cut(s) 148, 536, 1145, 1388, 1985, 2059, 2134
BcgI CGANNNNNNTGC 2 cut(s) 1964, 1998
BciT130I CCWGG 4 cut(s) 405, 651, 1071, 1463
BciVI GTATCC 1 cut(s) 716
BclI TGATCA 1 cut(s) 1681
BcnI CCSGG 1 cut(s) 394
BcoDI GTCTC 1 cut(s) 2006
BcuI ACTAGT 1 cut(s) 1498
BfaI CTAG 5 cut(s) 53, 939, 1499, 1599, 1853
BfmI CTRYAG 4 cut(s) 111, 1164, 1867, 1939
BfuAI ACCTGC 2 cut(s) 767, 1213
BfuI GTATCC 1 cut(s) 716
BglII AGATCT 1 cut(s) 811
BisI GCNGC 6 cut(s) 114, 617, 1164, 1490, 1867, 2145
BlsI GCNGC 6 cut(s) 115, 618, 1165, 1491, 1868, 2146
Bme1390I CCNGG 5 cut(s) 394, 405, 651, 1071, 1463
Bme18I GGWCC 3 cut(s) 647, 756, 1095
BmeRI GACNNNNNGTC 1 cut(s) 653
BmgT120I GGNCC 3 cut(s) 647, 756, 1095
BmiI GGNNCC 2 cut(s) 757, 1107
BmrFI CCNGG 5 cut(s) 394, 405, 651, 1071, 1463
BmrI ACTGGG 1 cut(s) 1554
BmsI GCATC 5 cut(s) 379, 868, 1056, 1972, 2076
BmuI ACTGGG 1 cut(s) 1554
BoxI GACNNNNGTC 1 cut(s) 1002
BpiI GAAGAC 2 cut(s) 1002, 2052
BpuEI CTTGAG 1 cut(s) 1534
BpuMI CCSGG 1 cut(s) 394
BsaJI CCNNGG 1 cut(s) 1986
BsaWI WCCGGW 3 cut(s) 522, 1092, 1194
Bsc4I CCNNNNNNNGG 6 cut(s) 237, 508, 581, 1566, 1764, 2070
Bse1I ACTGG 1 cut(s) 1560
Bse21I CCTNAGG 2 cut(s) 267, 321
Bse3DI GCAATG 5 cut(s) 12, 354, 592, 955, 1525
BseAI TCCGGA 2 cut(s) 1092, 1194
BseBI CCWGG 4 cut(s) 405, 651, 1071, 1463
BseDI CCNNGG 1 cut(s) 1986
BseGI GGATG 5 cut(s) 883, 1641, 1684, 1996, 2126
BseLI CCNNNNNNNGG 6 cut(s) 237, 508, 581, 1566, 1764, 2070
BseMI GCAATG 5 cut(s) 12, 354, 592, 955, 1525
BseMII CTCAG 3 cut(s) 335, 1676, 1779
BseNI ACTGG 1 cut(s) 1560
BseRI GAGGAG 5 cut(s) 115, 309, 506, 1959, 1962
BseSI GKGCMC 1 cut(s) 1631
BseXI GCAGC 4 cut(s) 125, 1150, 1501, 1853
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 3 cut(s) 246, 661, 2102
BshFI GGCC 2 cut(s) 259, 700
BshNI GGYRCC 1 cut(s) 1105
BsiHKAI GWGCWC 1 cut(s) 1631
BsiSI CCGG 4 cut(s) 393, 523, 1093, 1195
BslFI GGGAC 6 cut(s) 55, 409, 524, 769, 1497, 1780
BslI CCNNNNNNNGG 6 cut(s) 237, 508, 581, 1566, 1764, 2070
BsmAI GTCTC 1 cut(s) 2006
BsmFI GGGAC 6 cut(s) 55, 409, 524, 769, 1497, 1780
BsmI GAATGC 1 cut(s) 716
BsnI GGCC 2 cut(s) 259, 700
Bsp1286I GDGCHC 1 cut(s) 1631
Bsp13I TCCGGA 2 cut(s) 1092, 1194
Bsp143I GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
BspACI CCGC 1 cut(s) 617
BspANI GGCC 2 cut(s) 259, 700
BspCNI CTCAG 3 cut(s) 334, 1675, 1780
BspEI TCCGGA 2 cut(s) 1092, 1194
BspLI GGNNCC 2 cut(s) 757, 1107
BspMAI CTGCAG 3 cut(s) 115, 1168, 1871
BspMI ACCTGC 2 cut(s) 767, 1213
BspPI GGATC 5 cut(s) 280, 731, 1084, 1354, 1977
BspT107I GGYRCC 1 cut(s) 1105
BsrDI GCAATG 5 cut(s) 12, 354, 592, 955, 1525
BsrI ACTGG 1 cut(s) 1560
BssECI CCNNGG 1 cut(s) 1986
BssMI GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
BssT1I CCWWGG 1 cut(s) 1986
Bst2UI CCWGG 4 cut(s) 405, 651, 1071, 1463
Bst4CI ACNGT 9 cut(s) 19, 182, 280, 671, 785, 1001, 1223, 1898, 2017
Bst6I CTCTTC 4 cut(s) 1617, 1896, 2004, 2061
BstC8I GCNNGC 4 cut(s) 118, 261, 361, 1534
BstDEI CTNAG 6 cut(s) 267, 321, 797, 1062, 1662, 1788
BstF5I GGATG 5 cut(s) 883, 1641, 1684, 1996, 2126
BstKTI GATC 9 cut(s) 275, 349, 739, 814, 1092, 1349, 1684, 1860, 1972
BstMAI GTCTC 1 cut(s) 2006
BstMBI GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
BstMWI GCNNNNNNNGC 2 cut(s) 591, 887
BstNI CCWGG 4 cut(s) 405, 651, 1071, 1463
BstNSI RCATGY 2 cut(s) 900, 2114
BstPAI GACNNNNGTC 1 cut(s) 1002
BstSCI CCNGG 5 cut(s) 392, 403, 649, 1069, 1461
BstSFI CTRYAG 4 cut(s) 111, 1164, 1867, 1939
BstSLI GKGCMC 1 cut(s) 1631
BstV1I GCAGC 4 cut(s) 125, 1150, 1501, 1853
BstV2I GAAGAC 2 cut(s) 1002, 2052
BstX2I RGATCY 2 cut(s) 811, 1089
BstXI CCANNNNNNTGG 1 cut(s) 80
BstYI RGATCY 2 cut(s) 811, 1089
Bsu36I CCTNAGG 2 cut(s) 267, 321
BsuI GTATCC 1 cut(s) 716
BsuRI GGCC 2 cut(s) 259, 700
BtsCI GGATG 5 cut(s) 883, 1641, 1684, 1996, 2126
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 3 cut(s) 187, 304, 1228
BveI ACCTGC 2 cut(s) 767, 1213
Cac8I GCNNGC 4 cut(s) 118, 261, 361, 1534
CaiI CAGNNNCTG 3 cut(s) 62, 650, 675
Cfr13I GGNCC 3 cut(s) 647, 756, 1095
CsiI ACCWGGT 2 cut(s) 649, 1461
Csp6I GTAC 3 cut(s) 241, 1612, 1847
CviAII CATG 6 cut(s) 129, 374, 897, 1619, 1804, 2111
CviQI GTAC 3 cut(s) 241, 1612, 1847
DdeI CTNAG 6 cut(s) 267, 321, 797, 1062, 1662, 1788
DpnI GATC 9 cut(s) 274, 348, 738, 813, 1091, 1348, 1683, 1859, 1971
DpnII GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
DraIII CACNNNGTG 1 cut(s) 1223
DriI GACNNNNNGTC 1 cut(s) 653
Eam1104I CTCTTC 4 cut(s) 1617, 1896, 2004, 2061
Eam1105I GACNNNNNGTC 1 cut(s) 653
EarI CTCTTC 4 cut(s) 1617, 1896, 2004, 2061
Eco130I CCWWGG 1 cut(s) 1986
Eco147I AGGCCT 1 cut(s) 259
Eco47I GGWCC 3 cut(s) 647, 756, 1095
Eco81I CCTNAGG 2 cut(s) 267, 321
EcoO109I RGGNCCY 2 cut(s) 647, 756
EcoRI GAATTC 2 cut(s) 1406, 1508
EcoRII CCWGG 4 cut(s) 403, 649, 1069, 1461
EcoT14I CCWWGG 1 cut(s) 1986
ErhI CCWWGG 1 cut(s) 1986
FaeI CATG 6 cut(s) 132, 377, 900, 1622, 1807, 2114
FaqI GGGAC 6 cut(s) 55, 409, 524, 769, 1497, 1780
FatI CATG 6 cut(s) 128, 373, 896, 1618, 1803, 2110
FauNDI CATATG 1 cut(s) 985
FbaI TGATCA 1 cut(s) 1681
Fnu4HI GCNGC 6 cut(s) 114, 617, 1164, 1490, 1867, 2145
FokI GGATG 5 cut(s) 890, 1628, 1691, 2003, 2113
Fsp4HI GCNGC 6 cut(s) 114, 617, 1164, 1490, 1867, 2145
FspBI CTAG 5 cut(s) 53, 939, 1499, 1599, 1853
GluI GCNGC 6 cut(s) 114, 617, 1164, 1490, 1867, 2145
GsaI CCCAGC 1 cut(s) 506
HaeIII GGCC 2 cut(s) 259, 700
HapII CCGG 4 cut(s) 393, 523, 1093, 1195
Hin1II CATG 6 cut(s) 132, 377, 900, 1622, 1807, 2114
HincII GTYRAC 1 cut(s) 528
HindII GTYRAC 1 cut(s) 528
HindIII AAGCTT 1 cut(s) 1534
HinfI GANTC 6 cut(s) 437, 641, 1115, 1284, 1450, 1735
HpaII CCGG 4 cut(s) 393, 523, 1093, 1195
HphI GGTGA 6 cut(s) 158, 338, 1409, 1451, 1559, 2006
Hpy166II GTNNAC 9 cut(s) 283, 329, 419, 528, 1131, 1215, 1324, 1459, 1629
Hpy188I TCNGA 9 cut(s) 346, 613, 776, 1078, 1178, 1665, 1698, 1705, 1740
Hpy8I GTNNAC 9 cut(s) 283, 329, 419, 528, 1131, 1215, 1324, 1459, 1629
HpyAV CCTTC 6 cut(s) 407, 1030, 1030, 1396, 2068, 2087
HpyCH4III ACNGT 9 cut(s) 19, 182, 280, 671, 785, 1001, 1223, 1898, 2017
HpyCH4IV ACGT 1 cut(s) 1381
HpyF10VI GCNNNNNNNGC 2 cut(s) 591, 887
HpyF3I CTNAG 6 cut(s) 267, 321, 797, 1062, 1662, 1788
HpySE526I ACGT 1 cut(s) 1381
Hsp92II CATG 6 cut(s) 132, 377, 900, 1622, 1807, 2114
Kpn2I TCCGGA 2 cut(s) 1092, 1194
Ksp22I TGATCA 1 cut(s) 1681
Kzo9I GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
Lsp1109I GCAGC 4 cut(s) 125, 1150, 1501, 1853
LweI GCATC 5 cut(s) 379, 868, 1056, 1972, 2076
MabI ACCWGGT 2 cut(s) 649, 1461
MaeI CTAG 5 cut(s) 53, 939, 1499, 1599, 1853
MaeII ACGT 1 cut(s) 1381
MaeIII GTNAC 4 cut(s) 785, 972, 1253, 1810
MalI GATC 9 cut(s) 274, 348, 738, 813, 1091, 1348, 1683, 1859, 1971
MboI GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
MflI RGATCY 2 cut(s) 811, 1089
MhlI GDGCHC 1 cut(s) 1631
MlyI GAGTC 1 cut(s) 431
MmeI TCCRAC 5 cut(s) 855, 941, 1324, 1447, 1544
MroI TCCGGA 2 cut(s) 1092, 1194
MroXI GAANNNNTTC 3 cut(s) 1119, 1306, 1406
MseI TTAA 5 cut(s) 1008, 1146, 1422, 1761, 1916
MslI CAYNNNNRTG 4 cut(s) 92, 1103, 1689, 1789
MspI CCGG 4 cut(s) 393, 523, 1093, 1195
MspR9I CCNGG 5 cut(s) 394, 405, 651, 1071, 1463
Mva1269I GAATGC 1 cut(s) 716
MvaI CCWGG 4 cut(s) 405, 651, 1071, 1463
MwoI GCNNNNNNNGC 2 cut(s) 591, 887
NciI CCSGG 1 cut(s) 394
NdeI CATATG 1 cut(s) 985
NdeII GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
NlaIII CATG 6 cut(s) 132, 377, 900, 1622, 1807, 2114
NlaIV GGNNCC 2 cut(s) 757, 1107
NmuCI GTSAC 3 cut(s) 785, 1253, 1810
NspI RCATGY 2 cut(s) 900, 2114
OliI CACNNNNGTG 2 cut(s) 1103, 1789
PceI AGGCCT 1 cut(s) 259
PciI ACATGT 1 cut(s) 2110
PctI GAATGC 1 cut(s) 716
PdmI GAANNNNTTC 3 cut(s) 1119, 1306, 1406
PfeI GAWTC 5 cut(s) 641, 1115, 1284, 1450, 1735
PflMI CCANNNNNTGG 1 cut(s) 237
PkrI GCNGC 6 cut(s) 115, 618, 1165, 1491, 1868, 2146
PleI GAGTC 1 cut(s) 431
PpsI GAGTC 1 cut(s) 431
PpuMI RGGWCCY 2 cut(s) 647, 756
PscI ACATGT 1 cut(s) 2110
PshAI GACNNNNGTC 1 cut(s) 1002
Psp5II RGGWCCY 2 cut(s) 647, 756
Psp6I CCWGG 4 cut(s) 403, 649, 1069, 1461
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 4 cut(s) 403, 649, 1069, 1461
PspN4I GGNNCC 2 cut(s) 757, 1107
PspPI GGNCC 3 cut(s) 647, 756, 1095
PspPPI RGGWCCY 2 cut(s) 647, 756
PstI CTGCAG 3 cut(s) 115, 1168, 1871
PstNI CAGNNNCTG 3 cut(s) 62, 650, 675
PsuI RGATCY 2 cut(s) 811, 1089
RsaI GTAC 3 cut(s) 242, 1613, 1848
RsaNI GTAC 3 cut(s) 241, 1612, 1847
RseI CAYNNNNRTG 4 cut(s) 92, 1103, 1689, 1789
SaqAI TTAA 5 cut(s) 1008, 1146, 1422, 1761, 1916
SatI GCNGC 6 cut(s) 114, 617, 1164, 1490, 1867, 2145
Sau3AI GATC 9 cut(s) 272, 346, 736, 811, 1089, 1346, 1681, 1857, 1969
Sau96I GGNCC 3 cut(s) 647, 756, 1095
SchI GAGTC 1 cut(s) 431
ScrFI CCNGG 5 cut(s) 394, 405, 651, 1071, 1463
SduI GDGCHC 1 cut(s) 1631
SexAI ACCWGGT 2 cut(s) 649, 1461
SfaNI GCATC 5 cut(s) 379, 868, 1056, 1972, 2076
SfcI CTRYAG 4 cut(s) 111, 1164, 1867, 1939
SinI GGWCC 3 cut(s) 647, 756, 1095
SmiMI CAYNNNNRTG 4 cut(s) 92, 1103, 1689, 1789
SmlI CTYRAG 1 cut(s) 1513
SmoI CTYRAG 1 cut(s) 1513
SpeI ACTAGT 1 cut(s) 1498
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 1 cut(s) 617
SspI AATATT 2 cut(s) 560, 625
SspMI CTAG 5 cut(s) 53, 939, 1499, 1599, 1853
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 5 cut(s) 392, 403, 649, 1069, 1461
StyI CCWWGG 1 cut(s) 1986
TaaI ACNGT 9 cut(s) 19, 182, 280, 671, 785, 1001, 1223, 1898, 2017
TaiI ACGT 1 cut(s) 1384
TaqI TCGA 3 cut(s) 1356, 1980, 2059
TatI WGTACW 2 cut(s) 1611, 1846
TauI GCSGC 1 cut(s) 619
TfiI GAWTC 5 cut(s) 641, 1115, 1284, 1450, 1735
Tru1I TTAA 5 cut(s) 1008, 1146, 1422, 1761, 1916
Tru9I TTAA 5 cut(s) 1008, 1146, 1422, 1761, 1916
TscAI CASTG 3 cut(s) 187, 304, 1228
TseFI GTSAC 3 cut(s) 785, 1253, 1810
TseI GCWGC 5 cut(s) 113, 1163, 1489, 1866, 2144
Tsp45I GTSAC 3 cut(s) 785, 1253, 1810
TspDTI ATGAA 8 cut(s) 398, 966, 1012, 1305, 1521, 1528, 1635, 2015
TspGWI ACGGA 2 cut(s) 1178, 1430
TspRI CASTG 3 cut(s) 187, 304, 1228
Van91I CCANNNNNTGG 1 cut(s) 237
VneI GTGCAC 1 cut(s) 1627
VpaK11BI GGWCC 3 cut(s) 647, 756, 1095
XapI RAATTY 6 cut(s) 149, 476, 1028, 1237, 1406, 1508
XceI RCATGY 2 cut(s) 900, 2114
XmnI GAANNNNTTC 3 cut(s) 1119, 1306, 1406
XspI CTAG 5 cut(s) 53, 939, 1499, 1599, 1853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.