Transcription initiation factor TFIID subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1460 |
| Acc36I | ACCTGC | 1 cut(s) | 1460 |
| AccB1I | GGYRCC | 1 cut(s) | 705 |
| AccII | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| AcoI | YGGCCR | 3 cut(s) | 3, 123, 1283 |
| AcsI | RAATTY | 5 cut(s) | 407, 565, 778, 1063, 1234 |
| AfaI | GTAC | 3 cut(s) | 257, 270, 1040 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| AflII | CTTAAG | 2 cut(s) | 589, 1271 |
| AflIII | ACRYGT | 2 cut(s) | 1189, 1650 |
| AluBI | AGCT | 7 cut(s) | 225, 248, 642, 1045, 1058, 1107, 1490 |
| AluI | AGCT | 7 cut(s) | 225, 248, 642, 1045, 1058, 1107, 1490 |
| Alw21I | GWGCWC | 1 cut(s) | 227 |
| Alw26I | GTCTC | 3 cut(s) | 31, 713, 1255 |
| AoxI | GGCC | 5 cut(s) | 3, 123, 152, 984, 1283 |
| ApoI | RAATTY | 5 cut(s) | 407, 565, 778, 1063, 1234 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 198, 230 |
| AseI | ATTAAT | 1 cut(s) | 612 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 365 |
| AspLEI | GCGC | 5 cut(s) | 1213, 1290, 1400, 1476, 1571 |
| AsuII | TTCGAA | 1 cut(s) | 484 |
| BaeGI | GKGCMC | 1 cut(s) | 710 |
| BanI | GGYRCC | 1 cut(s) | 705 |
| BanII | GRGCYC | 1 cut(s) | 227 |
| BbsI | GAAGAC | 2 cut(s) | 2, 1250 |
| Bbv12I | GWGCWC | 1 cut(s) | 227 |
| BccI | CCATC | 4 cut(s) | 722, 746, 1201, 1584 |
| BceAI | ACGGC | 1 cut(s) | 1298 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1486, 1520 |
| BclI | TGATCA | 1 cut(s) | 1195 |
| BcoDI | GTCTC | 3 cut(s) | 31, 713, 1255 |
| BfaI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| BfmI | CTRYAG | 3 cut(s) | 1351, 1453, 1495 |
| BfrI | CTTAAG | 2 cut(s) | 589, 1271 |
| BfuAI | ACCTGC | 1 cut(s) | 1460 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 82 |
| BmiI | GGNNCC | 1 cut(s) | 707 |
| BmsI | GCATC | 5 cut(s) | 41, 429, 956, 1485, 1512 |
| BpiI | GAAGAC | 2 cut(s) | 2, 1250 |
| Bpu14I | TTCGAA | 1 cut(s) | 484 |
| Bsa29I | ATCGAT | 1 cut(s) | 993 |
| BsaAI | YACGTR | 1 cut(s) | 1190 |
| BsaJI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1237, 1267, 1474, 1504 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| Bse118I | RCCGGY | 2 cut(s) | 5, 150 |
| Bse1I | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| Bse3DI | GCAATG | 1 cut(s) | 1259 |
| BseCI | ATCGAT | 1 cut(s) | 993 |
| BseDI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| BseGI | GGATG | 4 cut(s) | 186, 927, 971, 1476 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| BseMI | GCAATG | 1 cut(s) | 1259 |
| BseMII | CTCAG | 5 cut(s) | 170, 369, 450, 1130, 1194 |
| BseNI | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| BseSI | GKGCMC | 1 cut(s) | 710 |
| BseX3I | CGGCCG | 1 cut(s) | 1283 |
| BseYI | CCCAGC | 2 cut(s) | 1296, 1420 |
| BsgI | GTGCAG | 2 cut(s) | 925, 929 |
| Bsh1236I | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1286 |
| BshFI | GGCC | 5 cut(s) | 5, 125, 154, 986, 1285 |
| BshNI | GGYRCC | 1 cut(s) | 705 |
| BshVI | ATCGAT | 1 cut(s) | 993 |
| BsiEI | CGRYCG | 1 cut(s) | 1286 |
| BsiHKAI | GWGCWC | 1 cut(s) | 227 |
| BsiSI | CCGG | 2 cut(s) | 6, 151 |
| BslFI | GGGAC | 1 cut(s) | 1493 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 97, 121, 568 |
| BsmAI | GTCTC | 3 cut(s) | 31, 713, 1255 |
| BsmBI | CGTCTC | 2 cut(s) | 31, 1255 |
| BsmFI | GGGAC | 1 cut(s) | 1493 |
| BsnI | GGCC | 5 cut(s) | 5, 125, 154, 986, 1285 |
| Bsp119I | TTCGAA | 1 cut(s) | 484 |
| Bsp1286I | GDGCHC | 2 cut(s) | 227, 710 |
| Bsp143I | GATC | 2 cut(s) | 103, 1195 |
| Bsp19I | CCATGG | 2 cut(s) | 126, 1118 |
| BspANI | GGCC | 5 cut(s) | 5, 125, 154, 986, 1285 |
| BspCNI | CTCAG | 5 cut(s) | 169, 370, 449, 1131, 1195 |
| BspDI | ATCGAT | 1 cut(s) | 993 |
| BspFNI | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 707 |
| BspMAI | CTGCAG | 3 cut(s) | 1355, 1457, 1499 |
| BspMI | ACCTGC | 1 cut(s) | 1460 |
| BspQI | GCTCTTC | 1 cut(s) | 1092 |
| BspT104I | TTCGAA | 1 cut(s) | 484 |
| BspT107I | GGYRCC | 1 cut(s) | 705 |
| BspTI | CTTAAG | 2 cut(s) | 589, 1271 |
| BsrDI | GCAATG | 1 cut(s) | 1259 |
| BsrFI | RCCGGY | 2 cut(s) | 5, 150 |
| BsrI | ACTGG | 3 cut(s) | 738, 1002, 1030 |
| BssAI | RCCGGY | 2 cut(s) | 5, 150 |
| BssECI | CCNNGG | 3 cut(s) | 126, 795, 1118 |
| BssMI | GATC | 2 cut(s) | 103, 1195 |
| BssT1I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Bst4CI | ACNGT | 3 cut(s) | 142, 542, 1249 |
| Bst6I | CTCTTC | 1 cut(s) | 1092 |
| BstAFI | CTTAAG | 2 cut(s) | 589, 1271 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1464 |
| BstBAI | YACGTR | 1 cut(s) | 1190 |
| BstBI | TTCGAA | 1 cut(s) | 484 |
| BstDEI | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| BstDSI | CCRYGG | 2 cut(s) | 126, 1118 |
| BstF5I | GGATG | 4 cut(s) | 186, 927, 971, 1476 |
| BstFNI | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| BstHHI | GCGC | 5 cut(s) | 1213, 1290, 1400, 1476, 1571 |
| BstKTI | GATC | 2 cut(s) | 106, 1198 |
| BstMAI | GTCTC | 3 cut(s) | 31, 713, 1255 |
| BstMBI | GATC | 2 cut(s) | 103, 1195 |
| BstMCI | CGRYCG | 1 cut(s) | 1286 |
| BstNSI | RCATGY | 3 cut(s) | 605, 1331, 1462 |
| BstSFI | CTRYAG | 3 cut(s) | 1351, 1453, 1495 |
| BstSLI | GKGCMC | 1 cut(s) | 710 |
| BstUI | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| BstV2I | GAAGAC | 2 cut(s) | 2, 1250 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 133 |
| BstZI | CGGCCG | 1 cut(s) | 1283 |
| Bsu15I | ATCGAT | 1 cut(s) | 993 |
| BsuRI | GGCC | 5 cut(s) | 5, 125, 154, 986, 1285 |
| BsuTUI | ATCGAT | 1 cut(s) | 993 |
| BtgI | CCRYGG | 2 cut(s) | 126, 1118 |
| BtgZI | GCGATG | 1 cut(s) | 312 |
| BtsCI | GGATG | 4 cut(s) | 186, 927, 971, 1476 |
| BtsI | GCAGTG | 1 cut(s) | 1336 |
| BtsIMutI | CAGTG | 2 cut(s) | 1136, 1336 |
| BveI | ACCTGC | 1 cut(s) | 1460 |
| CciI | TCATGA | 1 cut(s) | 106 |
| CfoI | GCGC | 5 cut(s) | 1213, 1290, 1400, 1476, 1571 |
| Cfr10I | RCCGGY | 2 cut(s) | 5, 150 |
| ClaI | ATCGAT | 1 cut(s) | 993 |
| CseI | GACGC | 2 cut(s) | 481, 1399 |
| Csp6I | GTAC | 3 cut(s) | 256, 269, 1039 |
| CviQI | GTAC | 3 cut(s) | 256, 269, 1039 |
| DdeI | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| DpnI | GATC | 2 cut(s) | 105, 1197 |
| DpnII | GATC | 2 cut(s) | 103, 1195 |
| DraI | TTTAAA | 1 cut(s) | 924 |
| EaeI | YGGCCR | 3 cut(s) | 3, 123, 1283 |
| EagI | CGGCCG | 1 cut(s) | 1283 |
| Eam1104I | CTCTTC | 1 cut(s) | 1092 |
| EarI | CTCTTC | 1 cut(s) | 1092 |
| Ecl136II | GAGCTC | 1 cut(s) | 225 |
| EclXI | CGGCCG | 1 cut(s) | 1283 |
| Eco130I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Eco24I | GRGCYC | 1 cut(s) | 227 |
| Eco32I | GATATC | 1 cut(s) | 699 |
| Eco52I | CGGCCG | 1 cut(s) | 1283 |
| Eco53kI | GAGCTC | 1 cut(s) | 225 |
| EcoICRI | GAGCTC | 1 cut(s) | 225 |
| EcoRV | GATATC | 1 cut(s) | 699 |
| EcoT14I | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| EcoT38I | GRGCYC | 1 cut(s) | 227 |
| ErhI | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| Esp3I | CGTCTC | 2 cut(s) | 31, 1255 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1147, 1179 |
| FaqI | GGGAC | 1 cut(s) | 1493 |
| FauI | CCCGC | 4 cut(s) | 1392, 1479, 1519, 1609 |
| FbaI | TGATCA | 1 cut(s) | 1195 |
| FokI | GGATG | 4 cut(s) | 173, 914, 978, 1463 |
| FriOI | GRGCYC | 1 cut(s) | 227 |
| FspBI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| GlaI | GCGC | 5 cut(s) | 1212, 1289, 1399, 1475, 1570 |
| GsaI | CCCAGC | 2 cut(s) | 1300, 1424 |
| HaeIII | GGCC | 5 cut(s) | 5, 125, 154, 986, 1285 |
| HapII | CCGG | 2 cut(s) | 6, 151 |
| HgaI | GACGC | 2 cut(s) | 481, 1399 |
| HhaI | GCGC | 5 cut(s) | 1213, 1290, 1400, 1476, 1571 |
| Hin6I | GCGC | 5 cut(s) | 1211, 1288, 1398, 1474, 1569 |
| HinP1I | GCGC | 5 cut(s) | 1211, 1288, 1398, 1474, 1569 |
| HincII | GTYRAC | 1 cut(s) | 762 |
| HindII | GTYRAC | 1 cut(s) | 762 |
| HindIII | AAGCTT | 2 cut(s) | 640, 1043 |
| HinfI | GANTC | 6 cut(s) | 446, 472, 623, 681, 844, 851 |
| HpaII | CCGG | 2 cut(s) | 6, 151 |
| Hpy166II | GTNNAC | 4 cut(s) | 136, 258, 762, 1023 |
| Hpy188I | TCNGA | 2 cut(s) | 67, 871 |
| Hpy188III | TCNNGA | 9 cut(s) | 107, 718, 848, 963, 1007, 1094, 1151, 1229, 1240 |
| Hpy8I | GTNNAC | 4 cut(s) | 136, 258, 762, 1023 |
| HpyAV | CCTTC | 6 cut(s) | 206, 329, 720, 976, 1535, 1627 |
| HpyCH4III | ACNGT | 3 cut(s) | 142, 542, 1249 |
| HpyCH4IV | ACGT | 1 cut(s) | 1189 |
| HpyF3I | CTNAG | 7 cut(s) | 156, 378, 400, 436, 638, 1139, 1203 |
| HpySE526I | ACGT | 1 cut(s) | 1189 |
| HspAI | GCGC | 5 cut(s) | 1211, 1288, 1398, 1474, 1569 |
| KroI | GCCGGC | 1 cut(s) | 150 |
| KroNI | GCCGGC | 1 cut(s) | 152 |
| Ksp22I | TGATCA | 1 cut(s) | 1195 |
| Kzo9I | GATC | 2 cut(s) | 103, 1195 |
| LguI | GCTCTTC | 1 cut(s) | 1092 |
| LmnI | GCTCC | 3 cut(s) | 598, 1408, 1495 |
| LweI | GCATC | 5 cut(s) | 41, 429, 956, 1485, 1512 |
| MaeI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| MaeII | ACGT | 1 cut(s) | 1189 |
| MaeIII | GTNAC | 4 cut(s) | 159, 604, 686, 1091 |
| MalI | GATC | 2 cut(s) | 105, 1197 |
| MboI | GATC | 2 cut(s) | 103, 1195 |
| MhlI | GDGCHC | 2 cut(s) | 227, 710 |
| MluI | ACGCGT | 1 cut(s) | 1650 |
| MlyI | GAGTC | 1 cut(s) | 481 |
| MmeI | TCCRAC | 2 cut(s) | 214, 483 |
| MroNI | GCCGGC | 1 cut(s) | 150 |
| MroXI | GAANNNNTTC | 1 cut(s) | 365 |
| MseI | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1272 |
| MslI | CAYNNNNRTG | 1 cut(s) | 131 |
| MspCI | CTTAAG | 2 cut(s) | 589, 1271 |
| MspI | CCGG | 2 cut(s) | 6, 151 |
| MvnI | CGCG | 5 cut(s) | 297, 1288, 1436, 1474, 1652 |
| NaeI | GCCGGC | 1 cut(s) | 152 |
| NcoI | CCATGG | 2 cut(s) | 126, 1118 |
| NdeII | GATC | 2 cut(s) | 103, 1195 |
| NgoMIV | GCCGGC | 1 cut(s) | 150 |
| NlaIV | GGNNCC | 1 cut(s) | 707 |
| NmeAIII | GCCGAG | 1 cut(s) | 1608 |
| NmuCI | GTSAC | 3 cut(s) | 604, 686, 1091 |
| NspI | RCATGY | 3 cut(s) | 605, 1331, 1462 |
| NspV | TTCGAA | 1 cut(s) | 484 |
| PaeI | GCATGC | 2 cut(s) | 1331, 1462 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PaqCI | CACCTGC | 1 cut(s) | 1460 |
| PciSI | GCTCTTC | 1 cut(s) | 1092 |
| PdiI | GCCGGC | 1 cut(s) | 152 |
| PdmI | GAANNNNTTC | 1 cut(s) | 365 |
| PfeI | GAWTC | 5 cut(s) | 446, 623, 681, 844, 851 |
| PflFI | GACNNNGTC | 1 cut(s) | 724 |
| PleI | GAGTC | 1 cut(s) | 480 |
| PpsI | GAGTC | 1 cut(s) | 480 |
| Ppu21I | YACGTR | 1 cut(s) | 1190 |
| PshBI | ATTAAT | 1 cut(s) | 612 |
| Psp124BI | GAGCTC | 1 cut(s) | 227 |
| PspFI | CCCAGC | 2 cut(s) | 1296, 1420 |
| PspN4I | GGNNCC | 1 cut(s) | 707 |
| PstI | CTGCAG | 3 cut(s) | 1355, 1457, 1499 |
| PsyI | GACNNNGTC | 1 cut(s) | 724 |
| RsaI | GTAC | 3 cut(s) | 257, 270, 1040 |
| RsaNI | GTAC | 3 cut(s) | 256, 269, 1039 |
| RseI | CAYNNNNRTG | 1 cut(s) | 131 |
| SacI | GAGCTC | 1 cut(s) | 227 |
| SapI | GCTCTTC | 1 cut(s) | 1092 |
| SaqAI | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1272 |
| Sau3AI | GATC | 2 cut(s) | 103, 1195 |
| SchI | GAGTC | 1 cut(s) | 481 |
| SduI | GDGCHC | 2 cut(s) | 227, 710 |
| SfaNI | GCATC | 5 cut(s) | 41, 429, 956, 1485, 1512 |
| SfcI | CTRYAG | 3 cut(s) | 1351, 1453, 1495 |
| SfuI | TTCGAA | 1 cut(s) | 484 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 131 |
| SmlI | CTYRAG | 2 cut(s) | 589, 1271 |
| SmoI | CTYRAG | 2 cut(s) | 589, 1271 |
| SphI | GCATGC | 2 cut(s) | 1331, 1462 |
| SspMI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |
| SstI | GAGCTC | 1 cut(s) | 227 |
| StyI | CCWWGG | 3 cut(s) | 126, 795, 1118 |
| TaaI | ACNGT | 3 cut(s) | 142, 542, 1249 |
| TaiI | ACGT | 1 cut(s) | 1192 |
| TaqI | TCGA | 4 cut(s) | 279, 484, 717, 993 |
| TatI | WGTACW | 2 cut(s) | 268, 1038 |
| TauI | GCSGC | 4 cut(s) | 125, 1288, 1327, 1436 |
| TfiI | GAWTC | 5 cut(s) | 446, 623, 681, 844, 851 |
| Tru1I | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1272 |
| Tru9I | TTAA | 7 cut(s) | 146, 545, 590, 612, 668, 923, 1272 |
| TscAI | CASTG | 2 cut(s) | 1143, 1343 |
| TseFI | GTSAC | 3 cut(s) | 604, 686, 1091 |
| Tsp45I | GTSAC | 3 cut(s) | 604, 686, 1091 |
| TspDTI | ATGAA | 4 cut(s) | 325, 630, 636, 1656 |
| TspGWI | ACGGA | 1 cut(s) | 359 |
| TspRI | CASTG | 2 cut(s) | 1143, 1343 |
| Tth111I | GACNNNGTC | 1 cut(s) | 724 |
| Vha464I | CTTAAG | 2 cut(s) | 589, 1271 |
| VspI | ATTAAT | 1 cut(s) | 612 |
| XapI | RAATTY | 5 cut(s) | 407, 565, 778, 1063, 1234 |
| XbaI | TCTAGA | 2 cut(s) | 847, 1006 |
| XceI | RCATGY | 3 cut(s) | 605, 1331, 1462 |
| XmnI | GAANNNNTTC | 1 cut(s) | 365 |
| XspI | CTAG | 4 cut(s) | 272, 702, 848, 1007 |