Rorug02G0247700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000633
Physical Location & Seq
Forward (+)
25808739 .. 25811485
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0247700.1

Sequence Viewer

Length: 1773 bp
ATGGTTGCGCTTTTACAGAGAAATAGCTGCATTTTTAAGTTATTGGGTTTGTGTTTACTCTTCTGCTGTTTGGTTGAGATTCCAGCAGTGGAGGCTAGGATTAGGCATTACAAATGGGAGGTGAAGTACGAGTACAAGTCCCCTGATTGCTTTAAGAAACTTGTTATCACCATCAATGGCGGAACTCCAGGACCAACCATACTTGCTCAGCAGGGAGACACCGTCGTCGTCGAGCTCAAGAATAGTTTGTTAACAGAAAATGTAGCCATACATTGGCATGGTATCAGACAGATTGGAACACCATGGAGTGATGGAACCGAAGGGGTGACTCAATGTCCAATATTGCCTGGAGACACTTTCAAATATCAGTTTGTTGTTGATAGGCCTGGAACTTATCTGTACCATGCTCACTATGGAATGCAAAGAGAAGCTGGCTTATATGGATCAATTCGAGTAGCGCTTCCTGAAGGAGAATCCGAGCCCTTCCTCTATGATTATGATCGAAGCATCATACTCAATGATTGGTACCACAGAAGCACTTATGAACATGCAGTAGGACTATCTTCCAATCCTTTTGAATGGGTTGGGGAACCTCAGTCACTTTTGATACAAGGCAAAGGAAGATTCAACTGCTCTAGCATCGCCACTCCAAGCTTAGAACCTGGTGTTTGTAACACAACTAGTCCTGACTGCTCTCCTTATGCAGTGACTGTAATCCCTGGCAAAACTTATCGACTAAGGATTGCTAGTTTGACTGCTCTATCAGCCCTCAGTTTCCAAATAGAGGGTCATAATTTGACAGTGGTTGAAGCAGATGGGCATTATGTAGAGCCATTTGTTGTAAAGAACCTGTTCATATATTCCGGTGAGACATATTCGGTTCTAATAAAAGCAGACCAAGACCCTTCAAGAAACTATTGGATGACAACCAACATTGTTAGCCGAAATCCCACCACCACCAACCAAAATGTCACCACCACCACCCCACCTGGTTTAGCCTTTCTGAATTACTATCCTAACCATCCTCGAAGATCTCCTCCAACAGTACCACCAGCAGGGCCGGCTTGGAATGATGTTCAGCCCCGACGAAATCAAAGTCTCGCCATTAAGGCACACCGAGATTTCATTCACACCCCTCCCCAAACCCCAGACAGAGTCATTGTTTTCCTCAATACCCAAAACGAGCTAAATGGCAATAGGCGCTGGTCAGTGAATAATGTCTCATTCACTCTTCCTCACACACCTTATCTCATTGCACTTCAACAAAACCTCACTGATGCATTTGATCAAACACCTCCGCCGGAAGGGTATGACTTTGTGAACTACGACATCTACAAAGTGGCAGACAACAACAGTACTACAACAAGTGATGGGATTTACAGGCTCCAGTTCAACACAACAGTGGACATAATCCTGCAAAATGCAAACACCATGACTCCGAACAACAGCGAGACGCATCCGTGGCATTTGCATGGCCACGATTTTTGGGTACTCGGATATGGGGAAGGAAAGTTTGACATCAACAATGACCCAAAAAAGTACAATTTGGTAAATCCTATCATGAAGAACACTGTGCCTGTTCATCCATACGGTTGGACAGCTTTGAGGTTCAGGGCAGATAATCCAGGTGTGTGGGCTTTCCATTGCCATATAGAGTCTCATTTCTATATGGGAATGGGTGTGGTGTTTGCAGAAGGAATAGACAGGTTGGGAAACTTGCCTTCATCTATAATGGGGTGTGGTGAAACCAAAGGAGTAATGCACAGACCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

590

Amino Acids

66.41

Weight (kDa)

6.34

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 41 - 153 2e-38 Multicopper oxidase
Cu-oxidase PF00394 169 - 338 1.5e-43 Multicopper oxidase
Cu-oxidase_2 PF07731 446 - 566 4.1e-39 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000633)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22376 FvH4_4g15485
rosa_laevigata RLG00000001772
rosa_multiflora Rmu_co7980664.1_g000001 Rmu_co7991850.1_g000001 Rmu_co8069086.1_g000001 Rmu_co8203420.1_g000001 Rmu_co8213206.1_g000001 Rmu_co8240317.1_g000001 Rmu_co8382323.1_g000001 Rmu_co8439419.1_g000001 Rmu_co8463919.1_g000001 Rmu_co8496399.1_g000001 Rmu_co8505885.1_g000001 Rmu_sc0000194.1_g000007 Rmu_sc0000194.1_g000008 Rmu_sc0000279.1_g000005 Rmu_sc0000367.1_g000177 Rmu_sc0000385.1_g000009 Rmu_sc0000423.1_g000016 Rmu_sc0000539.1_g000053 Rmu_sc0000779.1_g000017 Rmu_sc0000940.1_g000038 Rmu_sc0000942.1_g000025 Rmu_sc0001436.1_g000019 Rmu_sc0001477.1_g000004 Rmu_sc0001483.1_g000028 Rmu_sc0001518.1_g000005 Rmu_sc0001565.1_g000021 Rmu_sc0001655.1_g000010 Rmu_sc0001773.1_g000009 Rmu_sc0001782.1_g000037 Rmu_sc0001866.1_g000009 Rmu_sc0002054.1_g000022 Rmu_sc0002075.1_g000001 Rmu_sc0002264.1_g000016 Rmu_sc0002868.1_g000020 Rmu_sc0003033.1_g000062 Rmu_sc0003276.1_g000007 Rmu_sc0003486.1_g000003 Rmu_sc0003760.1_g000026 Rmu_sc0004391.1_g000020 Rmu_sc0004549.1_g000021 Rmu_sc0004835.1_g000002 Rmu_sc0005137.1_g000028 Rmu_sc0005178.1_g000022 Rmu_sc0005406.1_g000004 Rmu_sc0006059.1_g000064 Rmu_sc0006822.1_g000011 Rmu_sc0006997.1_g000014 Rmu_sc0007144.1_g000004 Rmu_sc0007321.1_g000001 Rmu_sc0007677.1_g000001 Rmu_sc0009120.1_g000003 Rmu_sc0009255.1_g000002 Rmu_sc0009427.1_g000001 Rmu_sc0009806.1_g000012 Rmu_sc0010048.1_g000010 Rmu_sc0011416.1_g000001 Rmu_sc0014844.1_g000011 Rmu_sc0018644.1_g000003 Rmu_sc0019345.1_g000006 Rmu_sc0025211.1_g000005 Rmu_sc0029888.1_g000001 Rmu_sc0035796.1_g000001 Rmu_ssc0000381.1_g000017
rosa_roxburghii Rroxscaffold_1G00018250 Rroxscaffold_2G00093100 Rroxscaffold_2G00101670 Rroxscaffold_3G00249740 Rroxscaffold_4G00310550 Rroxscaffold_4G00331340 Rroxscaffold_5G00337050 Rroxscaffold_5G00378590 Rroxscaffold_5G00378600 Rroxscaffold_6G00389000 Rroxscaffold_6G00401050
rosa_rugosa Rorug02G0247700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 224
Acc65I GGTACC 1 cut(s) 525
AccB1I GGYRCC 1 cut(s) 525
AccB7I CCANNNNNTGG 1 cut(s) 273
AciI CCGC 2 cut(s) 180, 1298
AclWI GGATC 1 cut(s) 451
AcoI YGGCCR 1 cut(s) 1474
AcuI CTGAAG 1 cut(s) 486
AfaI GTAC 8 cut(s) 128, 134, 401, 527, 1047, 1357, 1491, 1541
AfeI AGCGCT 1 cut(s) 459
AfiI CCNNNNNNNGG 4 cut(s) 273, 784, 1055, 1304
AgsI TTSAA 7 cut(s) 361, 578, 628, 809, 909, 1262, 1393
AhdI GACNNNNNGTC 1 cut(s) 333
AhlI ACTAGT 1 cut(s) 680
AjnI CCWGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
AleI CACNNNNGTG 1 cut(s) 1400
AluBI AGCT 6 cut(s) 27, 235, 431, 654, 1186, 1601
AluI AGCT 6 cut(s) 27, 235, 431, 654, 1186, 1601
Alw21I GWGCWC 1 cut(s) 237
Alw26I GTCTC 7 cut(s) 210, 345, 863, 1103, 1225, 1445, 1662
AlwI GGATC 1 cut(s) 451
AlwNI CAGNNNCTG 1 cut(s) 710
Aor51HI AGCGCT 1 cut(s) 459
AoxI GGCC 3 cut(s) 383, 1058, 1474
ApeKI GCWGC 1 cut(s) 27
ArsI GACNNNNNNTTYG 4 cut(s) 772, 804, 1081, 1113
Asp700I GAANNNNTTC 1 cut(s) 851
Asp718I GGTACC 1 cut(s) 525
AspLEI GCGC 3 cut(s) 10, 460, 1203
AspS9I GGNCC 2 cut(s) 191, 1058
AsuHPI GGTGA 6 cut(s) 133, 160, 337, 878, 964, 1754
AvaII GGWCC 1 cut(s) 191
BalI TGGCCA 1 cut(s) 1476
BanI GGYRCC 1 cut(s) 525
BanII GRGCYC 2 cut(s) 237, 483
BarI GAAGNNNNNNTAC 2 cut(s) 116, 148
Bbv12I GWGCWC 1 cut(s) 237
BbvI GCAGC 1 cut(s) 14
BccI CCATC 5 cut(s) 179, 305, 809, 1029, 1364
BciT130I CCWGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
BclI TGATCA 1 cut(s) 1285
BcoDI GTCTC 7 cut(s) 210, 345, 863, 1103, 1225, 1445, 1662
BcuI ACTAGT 1 cut(s) 680
BfaI CTAG 4 cut(s) 96, 636, 681, 747
BfoI RGCGCY 2 cut(s) 461, 1204
BglI GCCNNNNNGGC 1 cut(s) 1109
BglII AGATCT 1 cut(s) 1031
BisI GCNGC 1 cut(s) 28
BlpI GCTNAGC 1 cut(s) 207
BlsI GCNGC 1 cut(s) 29
BmcAI AGTACT 1 cut(s) 1357
Bme1390I CCNGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
Bme18I GGWCC 1 cut(s) 191
BmeRI GACNNNNNGTC 1 cut(s) 333
BmgT120I GGNCC 2 cut(s) 191, 1058
BmiI GGNNCC 4 cut(s) 316, 527, 591, 1385
BmrFI CCNGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
BmsI GCATC 4 cut(s) 516, 648, 1267, 1465
BpmI CTGGAG 3 cut(s) 171, 369, 1370
Bpu1102I GCTNAGC 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 221
BsaBI GATNNNNATC 1 cut(s) 498
BsaJI CCNNGG 3 cut(s) 302, 718, 1460
BsaWI WCCGGW 1 cut(s) 863
BsaXI ACNNNNNCTCC 6 cut(s) 110, 140, 207, 237, 1420, 1450
Bsc4I CCNNNNNNNGG 4 cut(s) 273, 784, 1055, 1304
Bse118I RCCGGY 1 cut(s) 1060
Bse1I ACTGG 1 cut(s) 1387
Bse3DI GCAATG 2 cut(s) 1251, 1642
Bse8I GATNNNNATC 1 cut(s) 498
BseBI CCWGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
BseDI CCNNGG 3 cut(s) 302, 718, 1460
BseGI GGATG 4 cut(s) 927, 1021, 1456, 1582
BseJI GATNNNNATC 1 cut(s) 498
BseLI CCNNNNNNNGG 4 cut(s) 273, 784, 1055, 1304
BseMI GCAATG 2 cut(s) 1251, 1642
BseMII CTCAG 3 cut(s) 221, 608, 784
BseNI ACTGG 1 cut(s) 1387
BseRI GAGGAG 1 cut(s) 1026
BseXI GCAGC 1 cut(s) 14
BshFI GGCC 3 cut(s) 385, 1060, 1476
BshNI GGYRCC 1 cut(s) 525
BsiHKAI GWGCWC 1 cut(s) 237
BsiSI CCGG 3 cut(s) 864, 1061, 1301
BslFI GGGAC 1 cut(s) 124
BslI CCNNNNNNNGG 4 cut(s) 273, 784, 1055, 1304
BsmAI GTCTC 7 cut(s) 210, 345, 863, 1103, 1225, 1445, 1662
BsmBI CGTCTC 1 cut(s) 1445
BsmFI GGGAC 1 cut(s) 124
BsmI GAATGC 1 cut(s) 423
BsnI GGCC 3 cut(s) 385, 1060, 1476
Bsp1286I GDGCHC 2 cut(s) 237, 483
Bsp143I GATC 4 cut(s) 443, 499, 1031, 1285
Bsp1720I GCTNAGC 1 cut(s) 207
Bsp19I CCATGG 1 cut(s) 302
BspACI CCGC 2 cut(s) 180, 1298
BspANI GGCC 3 cut(s) 385, 1060, 1476
BspCNI CTCAG 3 cut(s) 220, 607, 783
BspHI TCATGA 1 cut(s) 1560
BspLI GGNNCC 4 cut(s) 316, 527, 591, 1385
BspPI GGATC 1 cut(s) 451
BspT107I GGYRCC 1 cut(s) 525
BsrDI GCAATG 2 cut(s) 1251, 1642
BsrFI RCCGGY 1 cut(s) 1060
BsrI ACTGG 1 cut(s) 1387
BssAI RCCGGY 1 cut(s) 1060
BssECI CCNNGG 3 cut(s) 302, 718, 1460
BssMI GATC 4 cut(s) 443, 499, 1031, 1285
BssT1I CCWWGG 1 cut(s) 302
Bst2UI CCWGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
Bst4CI ACNGT 8 cut(s) 223, 712, 802, 1045, 1355, 1402, 1573, 1592
Bst6I CTCTTC 2 cut(s) 65, 1236
BstC8I GCNNGC 2 cut(s) 433, 1062
BstDEI CTNAG 5 cut(s) 207, 594, 655, 737, 770
BstDSI CCRYGG 2 cut(s) 302, 1460
BstF5I GGATG 4 cut(s) 927, 1021, 1456, 1582
BstH2I RGCGCY 2 cut(s) 461, 1204
BstHHI GCGC 3 cut(s) 10, 460, 1203
BstKTI GATC 4 cut(s) 446, 502, 1034, 1288
BstMAI GTCTC 7 cut(s) 210, 345, 863, 1103, 1225, 1445, 1662
BstMBI GATC 4 cut(s) 443, 499, 1031, 1285
BstMWI GCNNNNNNNGC 6 cut(s) 92, 764, 1061, 1109, 1200, 1462
BstNI CCWGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
BstNSI RCATGY 1 cut(s) 551
BstSCI CCNGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
BstV1I GCAGC 1 cut(s) 14
BstX2I RGATCY 1 cut(s) 1031
BstXI CCANNNNNNTGG 2 cut(s) 1593, 1632
BstYI RGATCY 1 cut(s) 1031
BsuRI GGCC 3 cut(s) 385, 1060, 1476
BtgI CCRYGG 2 cut(s) 302, 1460
BtgZI GCGATG 1 cut(s) 625
BtsCI GGATG 4 cut(s) 927, 1021, 1456, 1582
BtsI GCAGTG 2 cut(s) 93, 711
BtsIMutI CAGTG 7 cut(s) 93, 711, 807, 1215, 1272, 1407, 1569
Cac8I GCNNGC 2 cut(s) 433, 1062
CaiI CAGNNNCTG 1 cut(s) 710
CciI TCATGA 1 cut(s) 1560
CfoI GCGC 3 cut(s) 10, 460, 1203
Cfr10I RCCGGY 1 cut(s) 1060
Cfr13I GGNCC 2 cut(s) 191, 1058
CseI GACGC 1 cut(s) 1462
CsiI ACCWGGT 2 cut(s) 661, 988
Csp6I GTAC 8 cut(s) 127, 133, 400, 526, 1046, 1356, 1490, 1540
CspCI CAANNNNNGTGG 2 cut(s) 1466, 1501
CviAII CATG 7 cut(s) 278, 303, 404, 548, 1432, 1472, 1561
CviQI GTAC 8 cut(s) 127, 133, 400, 526, 1046, 1356, 1490, 1540
DdeI CTNAG 5 cut(s) 207, 594, 655, 737, 770
DpnI GATC 4 cut(s) 445, 501, 1033, 1287
DpnII GATC 4 cut(s) 443, 499, 1031, 1285
DrdI GACNNNNNNGTC 1 cut(s) 224
DriI GACNNNNNGTC 1 cut(s) 333
DseDI GACNNNNNNGTC 1 cut(s) 224
EaeI YGGCCR 1 cut(s) 1474
Eam1104I CTCTTC 2 cut(s) 65, 1236
Eam1105I GACNNNNNGTC 1 cut(s) 333
EarI CTCTTC 2 cut(s) 65, 1236
EciI GGCGGA 2 cut(s) 195, 1287
Ecl136II GAGCTC 1 cut(s) 235
Eco130I CCWWGG 1 cut(s) 302
Eco147I AGGCCT 1 cut(s) 385
Eco24I GRGCYC 2 cut(s) 237, 483
Eco47I GGWCC 1 cut(s) 191
Eco47III AGCGCT 1 cut(s) 459
Eco53kI GAGCTC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 486
EcoICRI GAGCTC 1 cut(s) 235
EcoRII CCWGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
EcoT14I CCWWGG 1 cut(s) 302
EcoT22I ATGCAT 1 cut(s) 1282
EcoT38I GRGCYC 2 cut(s) 237, 483
ErhI CCWWGG 1 cut(s) 302
Esp3I CGTCTC 1 cut(s) 1445
FaeI CATG 7 cut(s) 281, 306, 407, 551, 1435, 1475, 1564
FaqI GGGAC 1 cut(s) 124
FatI CATG 7 cut(s) 277, 302, 403, 547, 1431, 1471, 1560
FbaI TGATCA 1 cut(s) 1285
Fnu4HI GCNGC 1 cut(s) 28
FokI GGATG 4 cut(s) 934, 1008, 1443, 1569
FriOI GRGCYC 2 cut(s) 237, 483
Fsp4HI GCNGC 1 cut(s) 28
FspBI CTAG 4 cut(s) 96, 636, 681, 747
GlaI GCGC 3 cut(s) 9, 459, 1202
GluI GCNGC 1 cut(s) 28
GsuI CTGGAG 3 cut(s) 171, 369, 1370
HaeII RGCGCY 2 cut(s) 461, 1204
HaeIII GGCC 3 cut(s) 385, 1060, 1476
HapII CCGG 3 cut(s) 864, 1061, 1301
HgaI GACGC 1 cut(s) 1462
HhaI GCGC 3 cut(s) 10, 460, 1203
Hin1II CATG 7 cut(s) 281, 306, 407, 551, 1435, 1475, 1564
Hin6I GCGC 3 cut(s) 8, 458, 1201
HinP1I GCGC 3 cut(s) 8, 458, 1201
HincII GTYRAC 1 cut(s) 252
HindII GTYRAC 1 cut(s) 252
HindIII AAGCTT 1 cut(s) 652
HinfI GANTC 7 cut(s) 79, 328, 473, 624, 1155, 1435, 1655
HpaI GTTAAC 1 cut(s) 252
HpaII CCGG 3 cut(s) 864, 1061, 1301
HphI GGTGA 6 cut(s) 133, 160, 337, 878, 964, 1754
Hpy166II GTNNAC 4 cut(s) 56, 252, 1321, 1405
Hpy188I TCNGA 5 cut(s) 287, 478, 1005, 1440, 1496
Hpy188III TCNNGA 5 cut(s) 238, 464, 686, 909, 1561
Hpy8I GTNNAC 4 cut(s) 56, 252, 1321, 1405
Hpy99I CGWCG 4 cut(s) 227, 230, 233, 1089
HpyAV CCTTC 8 cut(s) 314, 461, 493, 915, 1298, 1499, 1688, 1731
HpyCH4III ACNGT 8 cut(s) 223, 712, 802, 1045, 1355, 1402, 1573, 1592
HpyF10VI GCNNNNNNNGC 6 cut(s) 92, 764, 1061, 1109, 1200, 1462
HpyF3I CTNAG 5 cut(s) 207, 594, 655, 737, 770
Hsp92II CATG 7 cut(s) 281, 306, 407, 551, 1435, 1475, 1564
HspAI GCGC 3 cut(s) 8, 458, 1201
KpnI GGTACC 1 cut(s) 529
KroI GCCGGC 1 cut(s) 1060
KroNI GCCGGC 1 cut(s) 1062
Ksp22I TGATCA 1 cut(s) 1285
KspAI GTTAAC 1 cut(s) 252
Kzo9I GATC 4 cut(s) 443, 499, 1031, 1285
LmnI GCTCC 1 cut(s) 1389
Lsp1109I GCAGC 1 cut(s) 14
LweI GCATC 4 cut(s) 516, 648, 1267, 1465
MabI ACCWGGT 2 cut(s) 661, 988
MaeI CTAG 4 cut(s) 96, 636, 681, 747
MaeIII GTNAC 5 cut(s) 325, 597, 671, 706, 970
MalI GATC 4 cut(s) 445, 501, 1033, 1287
MboI GATC 4 cut(s) 443, 499, 1031, 1285
MboII GAAGA 6 cut(s) 52, 555, 633, 1041, 1223, 1576
MflI RGATCY 1 cut(s) 1031
MhlI GDGCHC 2 cut(s) 237, 483
MlsI TGGCCA 1 cut(s) 1476
MluCI AATT 4 cut(s) 447, 793, 1006, 1543
MluNI TGGCCA 1 cut(s) 1476
MlyI GAGTC 4 cut(s) 322, 1164, 1429, 1664
MmeI TCCRAC 2 cut(s) 1064, 1574
Mox20I TGGCCA 1 cut(s) 1476
Mph1103I ATGCAT 1 cut(s) 1282
MroNI GCCGGC 1 cut(s) 1060
MroXI GAANNNNTTC 1 cut(s) 851
MscI TGGCCA 1 cut(s) 1476
MseI TTAA 4 cut(s) 36, 153, 251, 1107
MslI CAYNNNNRTG 3 cut(s) 276, 1400, 1470
Msp20I TGGCCA 1 cut(s) 1476
MspI CCGG 3 cut(s) 864, 1061, 1301
MspR9I CCNGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
Mva1269I GAATGC 1 cut(s) 423
MvaI CCWGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
MwoI GCNNNNNNNGC 6 cut(s) 92, 764, 1061, 1109, 1200, 1462
NaeI GCCGGC 1 cut(s) 1062
NcoI CCATGG 1 cut(s) 302
NdeII GATC 4 cut(s) 443, 499, 1031, 1285
NgoMIV GCCGGC 1 cut(s) 1060
NlaIII CATG 7 cut(s) 281, 306, 407, 551, 1435, 1475, 1564
NlaIV GGNNCC 4 cut(s) 316, 527, 591, 1385
NmuCI GTSAC 4 cut(s) 325, 597, 706, 970
NsiI ATGCAT 1 cut(s) 1282
NspI RCATGY 1 cut(s) 551
OliI CACNNNNGTG 1 cut(s) 1400
PagI TCATGA 1 cut(s) 1560
PceI AGGCCT 1 cut(s) 385
PctI GAATGC 1 cut(s) 423
PdiI GCCGGC 1 cut(s) 1062
PdmI GAANNNNTTC 1 cut(s) 851
PfeI GAWTC 3 cut(s) 79, 473, 624
PflFI GACNNNGTC 2 cut(s) 221, 1154
PflMI CCANNNNNTGG 1 cut(s) 273
PfoI TCCNGGA 1 cut(s) 187
PkrI GCNGC 1 cut(s) 29
PleI GAGTC 4 cut(s) 322, 1163, 1429, 1663
PpsI GAGTC 4 cut(s) 322, 1163, 1429, 1663
Psp124BI GAGCTC 1 cut(s) 237
Psp6I CCWGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
PspGI CCWGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
PspN4I GGNNCC 4 cut(s) 316, 527, 591, 1385
PspPI GGNCC 2 cut(s) 191, 1058
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 1 cut(s) 1031
PsyI GACNNNGTC 2 cut(s) 221, 1154
RsaI GTAC 8 cut(s) 128, 134, 401, 527, 1047, 1357, 1491, 1541
RsaNI GTAC 8 cut(s) 127, 133, 400, 526, 1046, 1356, 1490, 1540
RseI CAYNNNNRTG 3 cut(s) 276, 1400, 1470
SacI GAGCTC 1 cut(s) 237
SaqAI TTAA 4 cut(s) 36, 153, 251, 1107
SatI GCNGC 1 cut(s) 28
Sau3AI GATC 4 cut(s) 443, 499, 1031, 1285
Sau96I GGNCC 2 cut(s) 191, 1058
ScaI AGTACT 1 cut(s) 1357
SchI GAGTC 4 cut(s) 322, 1164, 1429, 1664
ScrFI CCNGG 7 cut(s) 189, 348, 387, 663, 720, 990, 1626
SduI GDGCHC 2 cut(s) 237, 483
SexAI ACCWGGT 2 cut(s) 661, 988
SfaNI GCATC 4 cut(s) 516, 648, 1267, 1465
SinI GGWCC 1 cut(s) 191
SmiMI CAYNNNNRTG 3 cut(s) 276, 1400, 1470
SmlI CTYRAG 1 cut(s) 236
SmoI CTYRAG 1 cut(s) 236
SpeI ACTAGT 1 cut(s) 680
Sse9I AATT 4 cut(s) 447, 793, 1006, 1543
SseBI AGGCCT 1 cut(s) 385
SsiI CCGC 2 cut(s) 180, 1298
SspI AATATT 1 cut(s) 342
SspMI CTAG 4 cut(s) 96, 636, 681, 747
SstI GAGCTC 1 cut(s) 237
StuI AGGCCT 1 cut(s) 385
StyD4I CCNGG 7 cut(s) 187, 346, 385, 661, 718, 988, 1624
StyI CCWWGG 1 cut(s) 302
TaaI ACNGT 8 cut(s) 223, 712, 802, 1045, 1355, 1402, 1573, 1592
TaqI TCGA 5 cut(s) 231, 451, 502, 733, 1027
TasI AATT 4 cut(s) 447, 793, 1006, 1543
TatI WGTACW 3 cut(s) 132, 1355, 1539
TfiI GAWTC 3 cut(s) 79, 473, 624
Tru1I TTAA 4 cut(s) 36, 153, 251, 1107
Tru9I TTAA 4 cut(s) 36, 153, 251, 1107
TscAI CASTG 7 cut(s) 93, 711, 807, 1215, 1279, 1407, 1576
TseFI GTSAC 4 cut(s) 325, 597, 706, 970
TseI GCWGC 1 cut(s) 27
Tsp45I GTSAC 4 cut(s) 325, 597, 706, 970
TspDTI ATGAA 6 cut(s) 558, 844, 1114, 1571, 1577, 1713
TspGWI ACGGA 1 cut(s) 1449
TspRI CASTG 7 cut(s) 93, 711, 807, 1215, 1279, 1407, 1576
Tth111I GACNNNGTC 2 cut(s) 221, 1154
Van91I CCANNNNNTGG 1 cut(s) 273
VpaK11BI GGWCC 1 cut(s) 191
XceI RCATGY 1 cut(s) 551
XcmI CCANNNNNNNNNTGG 1 cut(s) 410
XmnI GAANNNNTTC 1 cut(s) 851
XspI CTAG 4 cut(s) 96, 636, 681, 747
ZrmI AGTACT 1 cut(s) 1357
Zsp2I ATGCAT 1 cut(s) 1282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.