FvH4_4g02530

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000417
Physical Location & Seq
Reverse (-)
2298676 .. 2300825
2150 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g02530.t1

Sequence Viewer

Length: 1518 bp
ATGGCTGCAAATCATAGAAGTGGTAAAGATCAAACCGCTATCGATATTGGCGATGACTGCAAGAAATGCAAGAAATGCATCTTCAGAGTTCCTAAGGTGCTCCGGAGACAAAATAAAGAAGCATATACACCTGATGTTGTTTCAGTTGGACCTTTTCACTATCGAGTAAAGAGAGGGAAGGAGGAAGGAAAAGAAGACAAGGCAGTCCGAGAAAGCAAGGAAGGGGAGGAAGACTTCCAACTTATGGAAGGAGTGAAACAGAGCTATTTGAATGAAATTCTCGCAGGTATGAAAAATATAAGTTTGGAAGACTTGACTGCGAAAGTTACTGAGCTCTCAGGTCAGAAGAATGAAAGTACGTTTGAGGAACGAGCCCGCAATGTCTATGCAGAACCATTTGATCATATTTCTTCCCCAGACTTCATCAAGATGATGATAGTTGACGGTTGCTTCCTAGTTCAACTGTTTCGGAAGTGTAACGATCCGAAACTCAGGGCCTTTGATGACCCGATATTCAACATGGATTGCATGTTTCATTTCCTATGCCATGACCTTTTGCTTCTAGAGAATCAACTACCTTGGTTTGTTATCCACAGTTTGTATAGACTTACCCTTGATATATACCCTGGTCATGAAGCCTCTCTCTCTATTCTCATCCTTAAAGCCTTCAGCATACTACCATCACTGAAGCATAGTTGCTCAACCTATACTACGCATCTTAGTAAAACCAAGTGTCATTGTGATGATGATGTCCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAAGGACCATAGAAGAGAGAGCGCTTAAAGCAGCTGGTAAAGAAGGTGTATCCAACCCAGAAGAACATCAAATGCATAGTGCAAGGGCCGATCAAAAGAAGATCAGTCCAGAAGGCAAGAGTGACAATAAAGCCGATCGTAAAGCTATTTTTGACCCAGATCACCATCAAATGCACACTGCGACCGCTCTCTCAAAGGCAGACATTAAATTCCAACCTGTTATAAAGGAGAGCATACTGGACATCCGATTCGAAGAAGGCGGATTTTGCAGGAATCGCATTCTTAAGATTCCACAGCTAAACGTTGGAATGTCGTCGGAAACATTATTCAGGAACCTCATTGCAGTCGAGCAATGCTACCATGGTTATTCGAATGAAATTACATCCTATGCCATCTTGATGGATAACCTTATCTCTTCCAAGGAAGACATGGAATTACTTTGCAAGGAAAAAGTAATAGGAAACTGGCTGAGTGAGGAAGATGGTTGTAAGTTCTTCAGCAACCTATACAAGGACATCCCGCACAATAAGTTCTATTATGCTGATCTCTGCATGCAGGTGAATGATTGTTACAAACTGAGGCGGTATATATGGTTGGTTTCACTCAAAAGTGAAAAATTTTCCAACCCCTGGAAAATTTTGGCTTTTGCGATAGGTATTATCGTTTTGTGTCTCAGCATATGGAGTCAGACAAACAACATTCGGACTTTCTTGCAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

506

Amino Acids

58.08

Weight (kDa)

7.0

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 490 3.8e-94 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1019
AarI CACCTGC 1 cut(s) 1342
AasI GACNNNNNNGTC 1 cut(s) 203
Acc36I ACCTGC 2 cut(s) 275, 1342
AccB7I CCANNNNNTGG 2 cut(s) 244, 1425
AccBSI CCGCTC 1 cut(s) 983
AccIII TCCGGA 1 cut(s) 102
AciI CCGC 6 cut(s) 36, 376, 981, 1056, 1316, 1378
AclI AACGTT 1 cut(s) 1098
AclWI GGATC 1 cut(s) 476
AcsI RAATTY 4 cut(s) 276, 1004, 1412, 1431
AcuI CTGAAG 4 cut(s) 67, 652, 707, 1276
AfaI GTAC 1 cut(s) 358
AfeI AGCGCT 1 cut(s) 819
AfiI CCNNNNNNNGG 3 cut(s) 244, 1306, 1425
AflII CTTAAG 1 cut(s) 1079
AgsI TTSAA 3 cut(s) 271, 461, 517
AjnI CCWGG 2 cut(s) 625, 1424
AluBI AGCT 6 cut(s) 264, 334, 779, 830, 941, 1093
AluI AGCT 6 cut(s) 264, 334, 779, 830, 941, 1093
Alw21I GWGCWC 2 cut(s) 102, 336
Alw26I GTCTC 2 cut(s) 100, 1472
AlwI GGATC 1 cut(s) 476
Aor13HI TCCGGA 1 cut(s) 102
Aor51HI AGCGCT 1 cut(s) 819
AoxI GGCC 2 cut(s) 495, 882
ApeKI GCWGC 2 cut(s) 5, 827
ApoI RAATTY 4 cut(s) 276, 1004, 1412, 1431
ArsI GACNNNNNNTTYG 2 cut(s) 1028, 1060
AspLEI GCGC 1 cut(s) 820
AspS9I GGNCC 4 cut(s) 149, 495, 801, 882
AsuHPI GGTGA 2 cut(s) 950, 1366
AsuII TTCGAA 2 cut(s) 1047, 1166
AvaII GGWCC 2 cut(s) 149, 801
AxyI CCTNAGG 1 cut(s) 93
BanII GRGCYC 2 cut(s) 336, 376
BbsI GAAGAC 4 cut(s) 201, 237, 315, 1227
Bbv12I GWGCWC 2 cut(s) 102, 336
BbvI GCAGC 1 cut(s) 839
BccI CCATC 5 cut(s) 688, 969, 1189, 1196, 1271
BciT130I CCWGG 2 cut(s) 627, 1426
BciVI GTATCC 1 cut(s) 856
BclI TGATCA 1 cut(s) 400
BcoDI GTCTC 2 cut(s) 100, 1472
BfaI CTAG 2 cut(s) 455, 563
BfoI RGCGCY 1 cut(s) 821
BfrI CTTAAG 1 cut(s) 1079
BfuAI ACCTGC 2 cut(s) 275, 1342
BfuI GTATCC 1 cut(s) 856
BisI GCNGC 2 cut(s) 6, 828
BlsI GCNGC 2 cut(s) 7, 829
Bme1390I CCNGG 2 cut(s) 627, 1426
Bme18I GGWCC 2 cut(s) 149, 801
BmgT120I GGNCC 4 cut(s) 149, 495, 801, 882
BmiI GGNNCC 1 cut(s) 1130
BmrFI CCNGG 2 cut(s) 627, 1426
BmsI GCATC 2 cut(s) 87, 724
BpiI GAAGAC 4 cut(s) 201, 237, 315, 1227
Bpu14I TTCGAA 2 cut(s) 1047, 1166
Bsa29I ATCGAT 1 cut(s) 42
BsaBI GATNNNNATC 1 cut(s) 960
BsaJI CCNNGG 5 cut(s) 578, 625, 1156, 1215, 1424
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 3 cut(s) 244, 1306, 1425
Bse1I ACTGG 2 cut(s) 1038, 1265
Bse21I CCTNAGG 1 cut(s) 93
Bse3DI GCAATG 3 cut(s) 385, 1134, 1154
Bse8I GATNNNNATC 1 cut(s) 960
BseAI TCCGGA 1 cut(s) 102
BseBI CCWGG 2 cut(s) 627, 1426
BseCI ATCGAT 1 cut(s) 42
BseDI CCNNGG 5 cut(s) 578, 625, 1156, 1215, 1424
BseGI GGATG 4 cut(s) 654, 1038, 1178, 1311
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 3 cut(s) 244, 1306, 1425
BseMI GCAATG 3 cut(s) 385, 1134, 1154
BseMII CTCAG 6 cut(s) 321, 351, 505, 1256, 1364, 1483
BseNI ACTGG 2 cut(s) 1038, 1265
BseXI GCAGC 1 cut(s) 839
BsgI GTGCAG 1 cut(s) 740
Bsh1285I CGRYCG 2 cut(s) 934, 981
BshFI GGCC 2 cut(s) 497, 884
BshVI ATCGAT 1 cut(s) 42
BsiEI CGRYCG 2 cut(s) 934, 981
BsiHKAI GWGCWC 2 cut(s) 102, 336
BsiSI CCGG 1 cut(s) 103
BslI CCNNNNNNNGG 3 cut(s) 244, 1306, 1425
BsmAI GTCTC 2 cut(s) 100, 1472
BsmI GAATGC 1 cut(s) 1074
BsnI GGCC 2 cut(s) 497, 884
Bsp119I TTCGAA 2 cut(s) 1047, 1166
Bsp1286I GDGCHC 3 cut(s) 102, 336, 376
Bsp13I TCCGGA 1 cut(s) 102
Bsp143I GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
Bsp19I CCATGG 1 cut(s) 1156
BspACI CCGC 6 cut(s) 36, 376, 981, 1056, 1316, 1378
BspANI GGCC 2 cut(s) 497, 884
BspCNI CTCAG 6 cut(s) 322, 350, 504, 1257, 1365, 1482
BspDI ATCGAT 1 cut(s) 42
BspEI TCCGGA 1 cut(s) 102
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 1 cut(s) 1130
BspMI ACCTGC 2 cut(s) 275, 1342
BspPI GGATC 1 cut(s) 476
BspT104I TTCGAA 2 cut(s) 1047, 1166
BspTI CTTAAG 1 cut(s) 1079
BsrBI CCGCTC 1 cut(s) 983
BsrDI GCAATG 3 cut(s) 385, 1134, 1154
BsrI ACTGG 2 cut(s) 1038, 1265
BssECI CCNNGG 5 cut(s) 578, 625, 1156, 1215, 1424
BssMI GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
BssT1I CCWWGG 3 cut(s) 578, 1156, 1215
Bst2UI CCWGG 2 cut(s) 627, 1426
Bst4CI ACNGT 3 cut(s) 446, 465, 596
Bst6I CTCTTC 2 cut(s) 804, 1216
BstAFI CTTAAG 1 cut(s) 1079
BstAPI GCANNNNNTGC 2 cut(s) 66, 75
BstBI TTCGAA 2 cut(s) 1047, 1166
BstC8I GCNNGC 2 cut(s) 376, 1349
BstDEI CTNAG 8 cut(s) 93, 330, 337, 491, 719, 1265, 1373, 1469
BstDSI CCRYGG 1 cut(s) 1156
BstENI CCTNNNNNAGG 1 cut(s) 1304
BstF5I GGATG 4 cut(s) 654, 1038, 1178, 1311
BstH2I RGCGCY 1 cut(s) 821
BstHHI GCGC 1 cut(s) 820
BstKTI GATC 9 cut(s) 31, 403, 484, 769, 889, 900, 934, 958, 1342
BstMAI GTCTC 2 cut(s) 100, 1472
BstMBI GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
BstMCI CGRYCG 2 cut(s) 934, 981
BstMWI GCNNNNNNNGC 6 cut(s) 57, 66, 75, 824, 1062, 1071
BstNI CCWGG 2 cut(s) 627, 1426
BstNSI RCATGY 2 cut(s) 532, 1351
BstSCI CCNGG 2 cut(s) 625, 1424
BstV1I GCAGC 1 cut(s) 839
BstV2I GAAGAC 4 cut(s) 201, 237, 315, 1227
BstXI CCANNNNNNTGG 1 cut(s) 1195
Bsu15I ATCGAT 1 cut(s) 42
Bsu36I CCTNAGG 1 cut(s) 93
BsuI GTATCC 1 cut(s) 856
BsuRI GGCC 2 cut(s) 497, 884
BsuTUI ATCGAT 1 cut(s) 42
BtgI CCRYGG 1 cut(s) 1156
BtgZI GCGATG 1 cut(s) 66
BtsCI GGATG 4 cut(s) 654, 1038, 1178, 1311
BtsI GCAGTG 1 cut(s) 972
BtsIMutI CAGTG 2 cut(s) 683, 972
BveI ACCTGC 2 cut(s) 275, 1342
Cac8I GCNNGC 2 cut(s) 376, 1349
CciI TCATGA 1 cut(s) 631
CfoI GCGC 1 cut(s) 820
Cfr13I GGNCC 4 cut(s) 149, 495, 801, 882
ClaI ATCGAT 1 cut(s) 42
Csp6I GTAC 1 cut(s) 357
CviAII CATG 7 cut(s) 520, 529, 548, 632, 1157, 1225, 1348
CviQI GTAC 1 cut(s) 357
DdeI CTNAG 8 cut(s) 93, 330, 337, 491, 719, 1265, 1373, 1469
DpnI GATC 9 cut(s) 30, 402, 483, 768, 888, 899, 933, 957, 1341
DpnII GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
DrdI GACNNNNNNGTC 1 cut(s) 203
DseDI GACNNNNNNGTC 1 cut(s) 203
Eam1104I CTCTTC 2 cut(s) 804, 1216
EarI CTCTTC 2 cut(s) 804, 1216
EciI GGCGGA 1 cut(s) 1071
Ecl136II GAGCTC 1 cut(s) 334
Eco130I CCWWGG 3 cut(s) 578, 1156, 1215
Eco24I GRGCYC 2 cut(s) 336, 376
Eco47I GGWCC 2 cut(s) 149, 801
Eco47III AGCGCT 1 cut(s) 819
Eco53kI GAGCTC 1 cut(s) 334
Eco57I CTGAAG 4 cut(s) 67, 652, 707, 1276
Eco81I CCTNAGG 1 cut(s) 93
EcoICRI GAGCTC 1 cut(s) 334
EcoNI CCTNNNNNAGG 1 cut(s) 1304
EcoO109I RGGNCCY 1 cut(s) 495
EcoRII CCWGG 2 cut(s) 625, 1424
EcoT14I CCWWGG 3 cut(s) 578, 1156, 1215
EcoT22I ATGCAT 2 cut(s) 80, 873
EcoT38I GRGCYC 2 cut(s) 336, 376
ErhI CCWWGG 3 cut(s) 578, 1156, 1215
FaeI CATG 7 cut(s) 523, 532, 551, 635, 1160, 1228, 1351
FatI CATG 7 cut(s) 519, 528, 547, 631, 1156, 1224, 1347
FauI CCCGC 2 cut(s) 383, 1323
FauNDI CATATG 1 cut(s) 1475
FbaI TGATCA 1 cut(s) 400
Fnu4HI GCNGC 2 cut(s) 6, 828
FokI GGATG 4 cut(s) 641, 1025, 1165, 1298
FriOI GRGCYC 2 cut(s) 336, 376
Fsp4HI GCNGC 2 cut(s) 6, 828
FspBI CTAG 2 cut(s) 455, 563
GlaI GCGC 1 cut(s) 819
GluI GCNGC 2 cut(s) 6, 828
HaeII RGCGCY 1 cut(s) 821
HaeIII GGCC 2 cut(s) 497, 884
HapII CCGG 1 cut(s) 103
HhaI GCGC 1 cut(s) 820
Hin1II CATG 7 cut(s) 523, 532, 551, 635, 1160, 1228, 1351
Hin6I GCGC 1 cut(s) 818
HinP1I GCGC 1 cut(s) 818
HincII GTYRAC 1 cut(s) 442
HindII GTYRAC 1 cut(s) 442
HinfI GANTC 5 cut(s) 568, 1044, 1069, 1084, 1480
HpaII CCGG 1 cut(s) 103
HphI GGTGA 2 cut(s) 950, 1366
Hpy166II GTNNAC 1 cut(s) 442
Hpy188I TCNGA 9 cut(s) 86, 209, 345, 471, 486, 1043, 1114, 1485, 1500
Hpy188III TCNNGA 7 cut(s) 103, 427, 563, 632, 905, 1126, 1192
Hpy8I GTNNAC 1 cut(s) 442
Hpy99I CGWCG 1 cut(s) 1114
HpyAV CCTTC 8 cut(s) 172, 179, 215, 242, 676, 833, 902, 1046
HpyCH4III ACNGT 3 cut(s) 446, 465, 596
HpyCH4IV ACGT 2 cut(s) 359, 1098
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 66, 75, 824, 1062, 1071
HpyF3I CTNAG 8 cut(s) 93, 330, 337, 491, 719, 1265, 1373, 1469
HpySE526I ACGT 2 cut(s) 359, 1098
Hsp92II CATG 7 cut(s) 523, 532, 551, 635, 1160, 1228, 1351
HspAI GCGC 1 cut(s) 818
Kpn2I TCCGGA 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 400
Kzo9I GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
LmnI GCTCC 1 cut(s) 105
Lsp1109I GCAGC 1 cut(s) 839
LweI GCATC 2 cut(s) 87, 724
MaeI CTAG 2 cut(s) 455, 563
MaeII ACGT 2 cut(s) 359, 1098
MaeIII GTNAC 4 cut(s) 325, 476, 917, 1364
MalI GATC 9 cut(s) 30, 402, 483, 768, 888, 899, 933, 957, 1341
MbiI CCGCTC 1 cut(s) 983
MboI GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
MhlI GDGCHC 3 cut(s) 102, 336, 376
MluCI AATT 6 cut(s) 276, 1004, 1173, 1229, 1412, 1431
MlyI GAGTC 1 cut(s) 1489
MmeI TCCRAC 7 cut(s) 127, 262, 873, 1033, 1081, 1092, 1443
MnlI CCTC 8 cut(s) 167, 175, 220, 358, 649, 1142, 1264, 1368
Mph1103I ATGCAT 2 cut(s) 80, 873
MroI TCCGGA 1 cut(s) 102
MseI TTAA 5 cut(s) 660, 797, 822, 1002, 1080
MslI CAYNNNNRTG 5 cut(s) 18, 428, 741, 1193, 1352
MspA1I CMGCKG 1 cut(s) 830
MspCI CTTAAG 1 cut(s) 1079
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 2 cut(s) 627, 1426
Mva1269I GAATGC 1 cut(s) 1074
MvaI CCWGG 2 cut(s) 627, 1426
MwoI GCNNNNNNNGC 6 cut(s) 57, 66, 75, 824, 1062, 1071
NcoI CCATGG 1 cut(s) 1156
NdeI CATATG 1 cut(s) 1475
NdeII GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
NlaIII CATG 7 cut(s) 523, 532, 551, 635, 1160, 1228, 1351
NlaIV GGNNCC 1 cut(s) 1130
NmuCI GTSAC 1 cut(s) 917
NsiI ATGCAT 2 cut(s) 80, 873
NspI RCATGY 2 cut(s) 532, 1351
NspV TTCGAA 2 cut(s) 1047, 1166
PaeI GCATGC 1 cut(s) 1351
PagI TCATGA 1 cut(s) 631
PaqCI CACCTGC 1 cut(s) 1342
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 1 cut(s) 1074
PfeI GAWTC 4 cut(s) 568, 1044, 1069, 1084
PflMI CCANNNNNTGG 2 cut(s) 244, 1425
PkrI GCNGC 2 cut(s) 7, 829
Ple19I CGATCG 1 cut(s) 934
PleI GAGTC 1 cut(s) 1488
PpsI GAGTC 1 cut(s) 1488
PsiI TTATAA 1 cut(s) 1019
Psp124BI GAGCTC 1 cut(s) 336
Psp1406I AACGTT 1 cut(s) 1098
Psp6I CCWGG 2 cut(s) 625, 1424
PspGI CCWGG 2 cut(s) 625, 1424
PspN4I GGNNCC 1 cut(s) 1130
PspPI GGNCC 4 cut(s) 149, 495, 801, 882
PvuI CGATCG 1 cut(s) 934
PvuII CAGCTG 1 cut(s) 830
RsaI GTAC 1 cut(s) 358
RsaNI GTAC 1 cut(s) 357
RseI CAYNNNNRTG 5 cut(s) 18, 428, 741, 1193, 1352
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 5 cut(s) 660, 797, 822, 1002, 1080
SatI GCNGC 2 cut(s) 6, 828
Sau3AI GATC 9 cut(s) 28, 400, 481, 766, 886, 897, 931, 955, 1339
Sau96I GGNCC 4 cut(s) 149, 495, 801, 882
SchI GAGTC 1 cut(s) 1489
ScrFI CCNGG 2 cut(s) 627, 1426
SduI GDGCHC 3 cut(s) 102, 336, 376
SfaNI GCATC 2 cut(s) 87, 724
SfuI TTCGAA 2 cut(s) 1047, 1166
SinI GGWCC 2 cut(s) 149, 801
SmiMI CAYNNNNRTG 5 cut(s) 18, 428, 741, 1193, 1352
SmlI CTYRAG 1 cut(s) 1079
SmoI CTYRAG 1 cut(s) 1079
SphI GCATGC 1 cut(s) 1351
Sse9I AATT 6 cut(s) 276, 1004, 1173, 1229, 1412, 1431
SsiI CCGC 6 cut(s) 36, 376, 981, 1056, 1316, 1378
SspMI CTAG 2 cut(s) 455, 563
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 2 cut(s) 625, 1424
StyI CCWWGG 3 cut(s) 578, 1156, 1215
TaaI ACNGT 3 cut(s) 446, 465, 596
TaiI ACGT 2 cut(s) 362, 1101
TaqI TCGA 5 cut(s) 42, 163, 1047, 1143, 1166
TasI AATT 6 cut(s) 276, 1004, 1173, 1229, 1412, 1431
TfiI GAWTC 4 cut(s) 568, 1044, 1069, 1084
Tru1I TTAA 5 cut(s) 660, 797, 822, 1002, 1080
Tru9I TTAA 5 cut(s) 660, 797, 822, 1002, 1080
TscAI CASTG 2 cut(s) 690, 979
TseFI GTSAC 1 cut(s) 917
TseI GCWGC 2 cut(s) 5, 827
Tsp45I GTSAC 1 cut(s) 917
TspDTI ATGAA 7 cut(s) 288, 305, 366, 412, 524, 648, 1185
TspRI CASTG 2 cut(s) 690, 979
Van91I CCANNNNNTGG 2 cut(s) 244, 1425
Vha464I CTTAAG 1 cut(s) 1079
VpaK11BI GGWCC 2 cut(s) 149, 801
XagI CCTNNNNNAGG 1 cut(s) 1304
XapI RAATTY 4 cut(s) 276, 1004, 1412, 1431
XbaI TCTAGA 1 cut(s) 562
XceI RCATGY 2 cut(s) 532, 1351
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XspI CTAG 2 cut(s) 455, 563
Zsp2I ATGCAT 2 cut(s) 80, 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.