RchiOBHm_Chr4g0390741

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000417
Physical Location & Seq
Reverse (-)
6010579 .. 6012081
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36370

Sequence Viewer

Length: 1482 bp
ATGTCTGTAAGTGTTAAAGATCATACAGTTATCGATATTAATGACAAGAAATGCATCTTCAGAGTTCCTAATGTGCTCCTGAGACAAAATCCAGAAGCATATACACCTGACGTTGTTTCAATCGGACCTTTGCATCATTATCGAGAAAAGCGAGGCCAAGAGGATGGTAAAGGAGGCAAGGAAGACAAAGAAGGCAAAGGCGGGGAAGATTTCCAACTCATGAAACGAGTGAAAACTCGCTATTTGAATGAAATTCTCACAGGTATGAAGATAACTTTGGAAGAGCTGACTACAGAAGTCATTAAGCTCTCAGATCAAAAGAATGAAGGCGAATTTGAGCAACGCGCGCGCGATTTTTATGCAGAACCACTTGATCATATTTCCTCTGAAGAGTTCATCAAGATGATGATAGTTGACAGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTAACGACCAGAAACTCAGGGCCCTTGATGACCCGGTGTTCAACATGGACTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACAGTTTGTATGGCCTTACCCTTGATATATACCCTGGTGAAGCTTCCCGTGATGTGTACTCTGGTGAAGCTTCCCTCTCTATTCTAATCCTGAAAGTTCTTAGCATACTACCATCACTGAAGCATAGTTGCTCAACCTATAAAACGCATCTCCATGAAAACGAGTGTCATTGTGATGCTGATGTTCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAACTAACATAAAAGAGAGCGGGCATAAAGCAGCTGGTAAAGAAGGTACATCCAACCCTCAAGAACATCAAGTGCACACTGGGAACAAAGACAAGAGAGACAATAAAGCTACTCATGGAGACACAGATCAACATCAAATTCGTACCGCAACCGCACTCTCAAAGGCAGACATTAAATTCAAAAGGGTCGAAAAGGATAGCATAATGGACATCCAATTCAACGAGGGTGGGTGGTTCAAGAATGGGACTCTTGAGATACCACATCTAGACGTTGGAATGTCATCGAAAACATTATTCAGGAACCTCATTGCATTTGAGCAATGCTACCATGGTTATTCAAACGAGATTACATCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAATGAAGATATGGAATTACTTTGCAAGGAAAAAGTAATAGGTAACTGGATGAGTGATGAAGATGGTTGTAAGTTTTTCAGCAATCTTTACAAGGATATCCCGCACAAGAAGTTCTACTATGTTGATCTGTGCGAACAAGTGAATGATCGTTACAGATTGAAATGGTATACATGGTTGGCTTCACTCAAGGGTGAAAAATTTTCTAACCCCTGGAGAATTTCGGCTTTCGCGATAGGCATTTTCATTTTGATTCTCACCGCATGGAGTCAGATAAACAACTTTCGGGTTAACCGGCACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

493

Amino Acids

56.9

Weight (kDa)

6.17

Isoelectric Point (pI)

35.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 19 - 478 1.5e-99 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 813
AccI GTMKAC 1 cut(s) 1346
AccII CGCG 5 cut(s) 345, 347, 349, 351, 1409
AciI CCGC 6 cut(s) 201, 813, 939, 945, 1280, 1437
AcsI RAATTY 6 cut(s) 252, 332, 930, 968, 1376, 1395
AcuI CTGAAG 3 cut(s) 43, 408, 704
AfaI GTAC 3 cut(s) 623, 841, 937
AjnI CCWGG 2 cut(s) 598, 1388
AjuI GAANNNNNNNTTGG 2 cut(s) 260, 292
AluBI AGCT 7 cut(s) 286, 307, 608, 635, 776, 827, 902
AluI AGCT 7 cut(s) 286, 307, 608, 635, 776, 827, 902
Alw21I GWGCWC 2 cut(s) 78, 870
Alw26I GTCTC 3 cut(s) 76, 885, 906
Alw44I GTGCAC 1 cut(s) 866
AoxI GGCC 3 cut(s) 154, 468, 577
ApaI GGGCCC 1 cut(s) 472
ApaLI GTGCAC 1 cut(s) 866
ApeKI GCWGC 1 cut(s) 824
ApoI RAATTY 6 cut(s) 252, 332, 930, 968, 1376, 1395
AseI ATTAAT 1 cut(s) 39
AspLEI GCGC 3 cut(s) 347, 349, 351
AspS9I GGNCC 3 cut(s) 125, 468, 469
AsuC2I CCSGG 1 cut(s) 482
AsuHPI GGTGA 4 cut(s) 614, 641, 1382, 1426
AvaII GGWCC 1 cut(s) 125
BaeGI GKGCMC 2 cut(s) 472, 870
BanII GRGCYC 1 cut(s) 472
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 2 cut(s) 78, 870
BbvI GCAGC 1 cut(s) 836
BccI CCATC 4 cut(s) 158, 685, 1160, 1235
BcgI CGANNNNNNTGC 4 cut(s) 122, 156, 341, 375
BciT130I CCWGG 2 cut(s) 600, 1390
BclI TGATCA 1 cut(s) 373
BcnI CCSGG 1 cut(s) 482
BcoDI GTCTC 3 cut(s) 76, 885, 906
BfaI CTAG 2 cut(s) 536, 1058
BfmI CTRYAG 1 cut(s) 291
BisI GCNGC 1 cut(s) 825
BlsI GCNGC 1 cut(s) 826
Bme1390I CCNGG 3 cut(s) 482, 600, 1390
Bme18I GGWCC 1 cut(s) 125
BmgT120I GGNCC 3 cut(s) 125, 468, 469
BmiI GGNNCC 2 cut(s) 470, 1094
BmrFI CCNGG 3 cut(s) 482, 600, 1390
BmrI ACTGGG 1 cut(s) 882
BmsI GCATC 4 cut(s) 63, 142, 721, 730
BmuI ACTGGG 1 cut(s) 882
BpiI GAAGAC 1 cut(s) 189
BpmI CTGGAG 1 cut(s) 1411
BpuEI CTTGAG 3 cut(s) 837, 1064, 1349
BpuMI CCSGG 1 cut(s) 482
Bsa29I ATCGAT 1 cut(s) 33
BsaBI GATNNNNATC 1 cut(s) 924
BsaJI CCNNGG 4 cut(s) 551, 598, 1120, 1388
Bse118I RCCGGY 1 cut(s) 1470
Bse1I ACTGG 2 cut(s) 877, 1229
Bse3DI GCAATG 2 cut(s) 1098, 1118
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 2 cut(s) 600, 1390
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 4 cut(s) 551, 598, 1120, 1388
BseGI GGATG 4 cut(s) 169, 842, 1002, 1233
BseJI GATNNNNATC 1 cut(s) 924
BseMI GCAATG 2 cut(s) 1098, 1118
BseMII CTCAG 3 cut(s) 71, 324, 478
BseNI ACTGG 2 cut(s) 877, 1229
BsePI GCGCGC 2 cut(s) 345, 347
BseSI GKGCMC 2 cut(s) 472, 870
BseXI GCAGC 1 cut(s) 836
BsgI GTGCAG 1 cut(s) 737
Bsh1236I CGCG 5 cut(s) 345, 347, 349, 351, 1409
BshFI GGCC 3 cut(s) 156, 470, 579
BshVI ATCGAT 1 cut(s) 33
BsiHKAI GWGCWC 2 cut(s) 78, 870
BsiSI CCGG 2 cut(s) 482, 1471
BslFI GGGAC 1 cut(s) 1051
BsmAI GTCTC 3 cut(s) 76, 885, 906
BsmFI GGGAC 1 cut(s) 1051
BsnI GGCC 3 cut(s) 156, 470, 579
Bsp120I GGGCCC 1 cut(s) 468
Bsp1286I GDGCHC 3 cut(s) 78, 472, 870
Bsp143I GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
Bsp19I CCATGG 1 cut(s) 1120
Bsp68I TCGCGA 1 cut(s) 1409
BspACI CCGC 6 cut(s) 201, 813, 939, 945, 1280, 1437
BspANI GGCC 3 cut(s) 156, 470, 579
BspCNI CTCAG 3 cut(s) 72, 323, 477
BspDI ATCGAT 1 cut(s) 33
BspFNI CGCG 5 cut(s) 345, 347, 349, 351, 1409
BspHI TCATGA 1 cut(s) 219
BspLI GGNNCC 2 cut(s) 470, 1094
BspQI GCTCTTC 1 cut(s) 276
BsrBI CCGCTC 1 cut(s) 813
BsrDI GCAATG 2 cut(s) 1098, 1118
BsrFI RCCGGY 1 cut(s) 1470
BsrI ACTGG 2 cut(s) 877, 1229
BssAI RCCGGY 1 cut(s) 1470
BssECI CCNNGG 4 cut(s) 551, 598, 1120, 1388
BssHII GCGCGC 2 cut(s) 345, 347
BssMI GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
BssNAI GTATAC 1 cut(s) 1347
BssT1I CCWWGG 2 cut(s) 551, 1120
Bst1107I GTATAC 1 cut(s) 1347
Bst2UI CCWGG 2 cut(s) 600, 1390
Bst4CI ACNGT 5 cut(s) 28, 419, 438, 500, 569
Bst6I CTCTTC 3 cut(s) 276, 384, 1180
BstC8I GCNNGC 3 cut(s) 347, 349, 815
BstDEI CTNAG 4 cut(s) 80, 310, 464, 665
BstDSI CCRYGG 1 cut(s) 1120
BstF5I GGATG 4 cut(s) 169, 842, 1002, 1233
BstFNI CGCG 5 cut(s) 345, 347, 349, 351, 1409
BstHHI GCGC 3 cut(s) 347, 349, 351
BstKTI GATC 7 cut(s) 22, 316, 376, 766, 922, 1306, 1327
BstMAI GTCTC 3 cut(s) 76, 885, 906
BstMBI GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 346
BstNI CCWGG 2 cut(s) 600, 1390
BstSCI CCNGG 3 cut(s) 480, 598, 1388
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 2 cut(s) 472, 870
BstUI CGCG 5 cut(s) 345, 347, 349, 351, 1409
BstV1I GCAGC 1 cut(s) 836
BstV2I GAAGAC 1 cut(s) 189
BstXI CCANNNNNNTGG 2 cut(s) 164, 1159
BstZ17I GTATAC 1 cut(s) 1347
Bsu15I ATCGAT 1 cut(s) 33
BsuRI GGCC 3 cut(s) 156, 470, 579
BsuTUI ATCGAT 1 cut(s) 33
BtgI CCRYGG 1 cut(s) 1120
BtsCI GGATG 4 cut(s) 169, 842, 1002, 1233
BtsIMutI CAGTG 2 cut(s) 680, 870
BtuMI TCGCGA 1 cut(s) 1409
Cac8I GCNNGC 3 cut(s) 347, 349, 815
CciI TCATGA 1 cut(s) 219
CfoI GCGC 3 cut(s) 347, 349, 351
Cfr10I RCCGGY 1 cut(s) 1470
Cfr13I GGNCC 3 cut(s) 125, 468, 469
ClaI ATCGAT 1 cut(s) 33
Csp6I GTAC 3 cut(s) 622, 840, 936
CspCI CAANNNNNGTGG 2 cut(s) 1000, 1035
CviAII CATG 8 cut(s) 220, 493, 521, 719, 908, 1121, 1350, 1440
CviQI GTAC 3 cut(s) 622, 840, 936
DdeI CTNAG 4 cut(s) 80, 310, 464, 665
DpnI GATC 7 cut(s) 21, 315, 375, 765, 921, 1305, 1326
DpnII GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
Eam1104I CTCTTC 3 cut(s) 276, 384, 1180
EarI CTCTTC 3 cut(s) 276, 384, 1180
Eco130I CCWWGG 2 cut(s) 551, 1120
Eco24I GRGCYC 1 cut(s) 472
Eco32I GATATC 1 cut(s) 1276
Eco47I GGWCC 1 cut(s) 125
Eco57I CTGAAG 3 cut(s) 43, 408, 704
EcoO109I RGGNCCY 2 cut(s) 468, 469
EcoRII CCWGG 2 cut(s) 598, 1388
EcoRV GATATC 1 cut(s) 1276
EcoT14I CCWWGG 2 cut(s) 551, 1120
EcoT22I ATGCAT 1 cut(s) 56
EcoT38I GRGCYC 1 cut(s) 472
ErhI CCWWGG 2 cut(s) 551, 1120
FaeI CATG 8 cut(s) 223, 496, 524, 722, 911, 1124, 1353, 1443
FaqI GGGAC 1 cut(s) 1051
FatI CATG 8 cut(s) 219, 492, 520, 718, 907, 1120, 1349, 1439
FauI CCCGC 3 cut(s) 194, 806, 1287
FbaI TGATCA 1 cut(s) 373
FblI GTMKAC 1 cut(s) 1346
Fnu4HI GCNGC 1 cut(s) 825
FokI GGATG 4 cut(s) 176, 829, 989, 1240
FriOI GRGCYC 1 cut(s) 472
Fsp4HI GCNGC 1 cut(s) 825
FspBI CTAG 2 cut(s) 536, 1058
GlaI GCGC 3 cut(s) 346, 348, 350
GluI GCNGC 1 cut(s) 825
GsuI CTGGAG 1 cut(s) 1411
HaeIII GGCC 3 cut(s) 156, 470, 579
HapII CCGG 2 cut(s) 482, 1471
HhaI GCGC 3 cut(s) 347, 349, 351
Hin1II CATG 8 cut(s) 223, 496, 524, 722, 911, 1124, 1353, 1443
Hin6I GCGC 3 cut(s) 345, 347, 349
HinP1I GCGC 3 cut(s) 345, 347, 349
HincII GTYRAC 2 cut(s) 415, 1468
HindII GTYRAC 2 cut(s) 415, 1468
HindIII AAGCTT 2 cut(s) 606, 633
HinfI GANTC 4 cut(s) 541, 1039, 1429, 1444
HpaI GTTAAC 1 cut(s) 1468
HpaII CCGG 2 cut(s) 482, 1471
HphI GGTGA 4 cut(s) 614, 641, 1382, 1426
Hpy166II GTNNAC 5 cut(s) 415, 622, 868, 1347, 1468
Hpy188I TCNGA 6 cut(s) 62, 125, 313, 388, 444, 1449
Hpy8I GTNNAC 5 cut(s) 415, 622, 868, 1347, 1468
HpyAV CCTTC 3 cut(s) 185, 320, 830
HpyCH4III ACNGT 5 cut(s) 28, 419, 438, 500, 569
HpyCH4IV ACGT 2 cut(s) 111, 1062
HpyCH4V TGCA 7 cut(s) 54, 133, 362, 754, 868, 1103, 1203
HpyF10VI GCNNNNNNNGC 1 cut(s) 346
HpyF3I CTNAG 4 cut(s) 80, 310, 464, 665
HpySE526I ACGT 2 cut(s) 111, 1062
Hsp92II CATG 8 cut(s) 223, 496, 524, 722, 911, 1124, 1353, 1443
HspAI GCGC 3 cut(s) 345, 347, 349
Ksp22I TGATCA 1 cut(s) 373
KspAI GTTAAC 1 cut(s) 1468
Kzo9I GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 2 cut(s) 81, 537
Lsp1109I GCAGC 1 cut(s) 836
LweI GCATC 4 cut(s) 63, 142, 721, 730
MaeI CTAG 2 cut(s) 536, 1058
MaeII ACGT 2 cut(s) 111, 1062
MaeIII GTNAC 3 cut(s) 449, 1220, 1328
MalI GATC 7 cut(s) 21, 315, 375, 765, 921, 1305, 1326
MauBI CGCGCGCG 2 cut(s) 345, 347
MbiI CCGCTC 1 cut(s) 813
MboI GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
MboII GAAGA 9 cut(s) 49, 194, 218, 280, 293, 401, 1167, 1196, 1250
MhlI GDGCHC 3 cut(s) 78, 472, 870
MluCI AATT 9 cut(s) 252, 332, 429, 930, 968, 1007, 1193, 1376, 1395
MlyI GAGTC 2 cut(s) 1033, 1453
MmeI TCCRAC 3 cut(s) 238, 870, 1045
MnlI CCTC 9 cut(s) 146, 154, 167, 394, 650, 861, 1009, 1106, 1178
Mph1103I ATGCAT 1 cut(s) 56
MseI TTAA 6 cut(s) 15, 39, 303, 794, 966, 1467
MslI CAYNNNNRTG 5 cut(s) 263, 401, 717, 738, 1157
MspA1I CMGCKG 1 cut(s) 827
MspI CCGG 2 cut(s) 482, 1471
MspR9I CCNGG 3 cut(s) 482, 600, 1390
MvaI CCWGG 2 cut(s) 600, 1390
MvnI CGCG 5 cut(s) 345, 347, 349, 351, 1409
MwoI GCNNNNNNNGC 1 cut(s) 346
NciI CCSGG 1 cut(s) 482
NcoI CCATGG 1 cut(s) 1120
NdeII GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
NlaIII CATG 8 cut(s) 223, 496, 524, 722, 911, 1124, 1353, 1443
NlaIV GGNNCC 2 cut(s) 470, 1094
NruI TCGCGA 1 cut(s) 1409
NsiI ATGCAT 1 cut(s) 56
PagI TCATGA 1 cut(s) 219
PauI GCGCGC 2 cut(s) 345, 347
PciSI GCTCTTC 1 cut(s) 276
PcsI WCGNNNNNNNCGW 2 cut(s) 148, 1406
PfeI GAWTC 2 cut(s) 541, 1429
PkrI GCNGC 1 cut(s) 826
PleI GAGTC 2 cut(s) 1033, 1452
PpsI GAGTC 2 cut(s) 1033, 1452
PshBI ATTAAT 1 cut(s) 39
Psp6I CCWGG 2 cut(s) 598, 1388
PspGI CCWGG 2 cut(s) 598, 1388
PspN4I GGNNCC 2 cut(s) 470, 1094
PspOMI GGGCCC 1 cut(s) 468
PspPI GGNCC 3 cut(s) 125, 468, 469
PteI GCGCGC 2 cut(s) 345, 347
PvuII CAGCTG 1 cut(s) 827
RruI TCGCGA 1 cut(s) 1409
RsaI GTAC 3 cut(s) 623, 841, 937
RsaNI GTAC 3 cut(s) 622, 840, 936
RseI CAYNNNNRTG 5 cut(s) 263, 401, 717, 738, 1157
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 6 cut(s) 15, 39, 303, 794, 966, 1467
SatI GCNGC 1 cut(s) 825
Sau3AI GATC 7 cut(s) 19, 313, 373, 763, 919, 1303, 1324
Sau96I GGNCC 3 cut(s) 125, 468, 469
SchI GAGTC 2 cut(s) 1033, 1453
ScrFI CCNGG 3 cut(s) 482, 600, 1390
SduI GDGCHC 3 cut(s) 78, 472, 870
SfaNI GCATC 4 cut(s) 63, 142, 721, 730
SfcI CTRYAG 1 cut(s) 291
SinI GGWCC 1 cut(s) 125
SmiMI CAYNNNNRTG 5 cut(s) 263, 401, 717, 738, 1157
SmlI CTYRAG 3 cut(s) 852, 1043, 1364
SmoI CTYRAG 3 cut(s) 852, 1043, 1364
Sse9I AATT 9 cut(s) 252, 332, 429, 930, 968, 1007, 1193, 1376, 1395
SsiI CCGC 6 cut(s) 201, 813, 939, 945, 1280, 1437
SspMI CTAG 2 cut(s) 536, 1058
StyD4I CCNGG 3 cut(s) 480, 598, 1388
StyI CCWWGG 2 cut(s) 551, 1120
TaaI ACNGT 5 cut(s) 28, 419, 438, 500, 569
TaiI ACGT 2 cut(s) 114, 1065
TaqI TCGA 4 cut(s) 33, 142, 981, 1076
TasI AATT 9 cut(s) 252, 332, 429, 930, 968, 1007, 1193, 1376, 1395
TatI WGTACW 1 cut(s) 621
TfiI GAWTC 2 cut(s) 541, 1429
Tru1I TTAA 6 cut(s) 15, 39, 303, 794, 966, 1467
Tru9I TTAA 6 cut(s) 15, 39, 303, 794, 966, 1467
TscAI CASTG 2 cut(s) 687, 877
TseI GCWGC 1 cut(s) 824
TspRI CASTG 2 cut(s) 687, 877
VneI GTGCAC 1 cut(s) 866
VpaK11BI GGWCC 1 cut(s) 125
VspI ATTAAT 1 cut(s) 39
XapI RAATTY 6 cut(s) 252, 332, 930, 968, 1376, 1395
XbaI TCTAGA 1 cut(s) 1057
XcmI CCANNNNNNNNNTGG 1 cut(s) 572
XmiI GTMKAC 1 cut(s) 1346
XspI CTAG 2 cut(s) 536, 1058
Zsp2I ATGCAT 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.