RchiOBHm_Chr4g0390801

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000417
Physical Location & Seq
Forward (+)
6087577 .. 6089413
1837 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36374

Sequence Viewer

Length: 1422 bp
ATGTCCGCAAATCATAGAAGTGGTAGAGATCATACAGTTATCGATATTCTCGATGGCAGCGAGAAAAGCACGAATTGCATCTTCAGAGTTCCTAACGTGCTCTGGAGACAAAATCCAAAAGCATATACACCTGATGTTGTTTCAATCGGACCTTTTCATCATCATCTAGAAAAGCGAGGGAAGAAGGAAGGTCAAGGAGGCAAGAAAGGCAATGGCGAAAAATATTTCCAACTCATGGAACGAGTGAAAACTCGCTATTTGAATGAAATTCTCGCAGGTATGCAGAATATGACTATGGAAGAGTTGACCGCAAAAGTTATTGAGCTCTCAGATCAAAAGAATGAAGGCGGTTTTGAGCAACGCGCGCGCAATTTTTATGCAGAACCACTTCATTTTTCCTCTGAAGAGTTCATCAAGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTGACGATCCGAAACTCAGGGCCTTATATGACCCGGTGTTCAACATGGACTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAAAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGACCTTACCCATGATATATACCCTAATCAACCCTCCCTCTCTTTTCGCGTCCTTAAAGCCTTCAGCATGCTACCATCACTAAGGCAAGGTTGCTCATCTTATAGTAAGCATCTCCGCCAAAACAATTGTCATCTGCACATACTTGATCTGATAAGAAGTTCCATAGTAGTTCCATTAAGGACGTCCAACCCTGAAGAACATGAAGTTGACTCTGGGAACAAACACAAGGGAAACAATGAAGTCGTTCATGAAGCTATCATTGACCCAGATCTACATCAAATTCGTACCGCAACCGAACTCTCAAAGTCAGACATTAAATTCAAAATGGCCAAAAAGGAGAGCATAATGGACATCCGATTTAAAAAGGGTACGTGGTTCAGGAATGGGATTCTTGAGATTCCACAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCACGGTTATTCAAACGAGATAACATCTTATGCTATCTTTATGGATAACCTCATCTCTTCAAAGGAAGATATGGAATTACTTTGCAAGAAAAAAGTAATAGGTAACTTGATGAGTGATGAGGATGGCTGTAAGTTTTTCAGCAACCTTTACAAGGACATCCCGCACAACAAGTTCTACTATGTAGAGCTGTGCAAAGAAGTGAATGATCGTTACAATATGAGATGGTATACATGGTTGGCTTTACTCAAGTTTGAAAAGTTTTCTAACCCCTGGAAGGTTTTGGCTTTCGTGGTAGCTATTATCGCTTTGACTCTCACCGCGTGGAGTCAGACAAACCTCATTCGGATTAACTGGCATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

473

Amino Acids

55.22

Weight (kDa)

8.17

Isoelectric Point (pI)

41.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 458 1.2e-101 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 776
Acc36I ACCTGC 1 cut(s) 266
AccB7I CCANNNNNTGG 1 cut(s) 235
AccI GTMKAC 1 cut(s) 1286
AccII CGCG 5 cut(s) 363, 365, 367, 639, 1379
AciI CCGC 7 cut(s) 6, 309, 348, 706, 879, 1220, 1377
AclI AACGTT 1 cut(s) 1002
AclWI GGATC 1 cut(s) 464
AcoI YGGCCR 1 cut(s) 918
AcsI RAATTY 3 cut(s) 267, 870, 908
AcuI CTGAAG 4 cut(s) 67, 423, 637, 804
AcyI GRCGYC 1 cut(s) 773
AdeI CACNNNGTG 1 cut(s) 1380
AfaI GTAC 2 cut(s) 877, 961
AfiI CCNNNNNNNGG 3 cut(s) 235, 1210, 1333
AgsI TTSAA 8 cut(s) 144, 262, 449, 505, 913, 1071, 1119, 1313
AjnI CCWGG 1 cut(s) 1328
AluBI AGCT 5 cut(s) 325, 845, 997, 1246, 1355
AluI AGCT 5 cut(s) 325, 845, 997, 1246, 1355
Alw21I GWGCWC 2 cut(s) 102, 327
Alw26I GTCTC 1 cut(s) 100
AlwI GGATC 1 cut(s) 464
AoxI GGCC 2 cut(s) 483, 918
ApeKI GCWGC 1 cut(s) 57
ApoI RAATTY 3 cut(s) 267, 870, 908
ArsI GACNNNNNNTTYG 2 cut(s) 703, 735
Asp700I GAANNNNTTC 2 cut(s) 387, 834
AspLEI GCGC 3 cut(s) 365, 367, 369
AspS9I GGNCC 2 cut(s) 149, 483
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 1 cut(s) 1366
AvaII GGWCC 1 cut(s) 149
BalI TGGCCA 1 cut(s) 920
BanII GRGCYC 1 cut(s) 327
Bbv12I GWGCWC 2 cut(s) 102, 327
BbvI GCAGC 1 cut(s) 69
BccI CCATC 4 cut(s) 47, 673, 1175, 1275
BciT130I CCWGG 1 cut(s) 1330
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 1 cut(s) 100
BfaI CTAG 2 cut(s) 167, 551
BfuAI ACCTGC 1 cut(s) 266
BglII AGATCT 1 cut(s) 859
BisI GCNGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 59
Bme1390I CCNGG 2 cut(s) 497, 1330
Bme18I GGWCC 1 cut(s) 149
BmgT120I GGNCC 2 cut(s) 149, 483
BmiI GGNNCC 1 cut(s) 1034
BmrFI CCNGG 2 cut(s) 497, 1330
BmsI GCATC 2 cut(s) 87, 709
BpmI CTGGAG 1 cut(s) 124
BpuEI CTTGAG 2 cut(s) 1004, 1289
BpuMI CCSGG 1 cut(s) 497
Bsa29I ATCGAT 1 cut(s) 42
BsaAI YACGTR 1 cut(s) 963
BsaBI GATNNNNATC 1 cut(s) 864
BsaHI GRCGYC 1 cut(s) 773
BsaJI CCNNGG 3 cut(s) 566, 1060, 1328
Bsc4I CCNNNNNNNGG 3 cut(s) 235, 1210, 1333
Bse1I ACTGG 1 cut(s) 1415
Bse3DI GCAATG 3 cut(s) 217, 1038, 1058
Bse8I GATNNNNATC 1 cut(s) 864
BseBI CCWGG 1 cut(s) 1330
BseCI ATCGAT 1 cut(s) 42
BseDI CCNNGG 3 cut(s) 566, 1060, 1328
BseGI GGATG 3 cut(s) 942, 1186, 1215
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 3 cut(s) 235, 1210, 1333
BseMI GCAATG 3 cut(s) 217, 1038, 1058
BseMII CTCAG 2 cut(s) 342, 493
BseNI ACTGG 1 cut(s) 1415
BsePI GCGCGC 2 cut(s) 363, 365
BseXI GCAGC 1 cut(s) 69
BsgI GTGCAG 1 cut(s) 710
Bsh1236I CGCG 5 cut(s) 363, 365, 367, 639, 1379
BshFI GGCC 2 cut(s) 485, 920
BshVI ATCGAT 1 cut(s) 42
BsiHKAI GWGCWC 2 cut(s) 102, 327
BsiSI CCGG 1 cut(s) 497
BslI CCNNNNNNNGG 3 cut(s) 235, 1210, 1333
BsmAI GTCTC 1 cut(s) 100
BsnI GGCC 2 cut(s) 485, 920
Bsp1286I GDGCHC 2 cut(s) 102, 327
Bsp143I GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
BspACI CCGC 7 cut(s) 6, 309, 348, 706, 879, 1220, 1377
BspANI GGCC 2 cut(s) 485, 920
BspCNI CTCAG 2 cut(s) 341, 492
BspDI ATCGAT 1 cut(s) 42
BspFNI CGCG 5 cut(s) 363, 365, 367, 639, 1379
BspHI TCATGA 1 cut(s) 838
BspLI GGNNCC 1 cut(s) 1034
BspMI ACCTGC 1 cut(s) 266
BspPI GGATC 1 cut(s) 464
BsrDI GCAATG 3 cut(s) 217, 1038, 1058
BsrI ACTGG 1 cut(s) 1415
BssECI CCNNGG 3 cut(s) 566, 1060, 1328
BssHII GCGCGC 2 cut(s) 363, 365
BssMI GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
BssNAI GTATAC 1 cut(s) 1287
BssNI GRCGYC 1 cut(s) 773
BssT1I CCWWGG 1 cut(s) 566
Bst1107I GTATAC 1 cut(s) 1287
Bst2UI CCWGG 1 cut(s) 1330
Bst4CI ACNGT 5 cut(s) 37, 434, 453, 515, 1064
Bst6I CTCTTC 3 cut(s) 294, 399, 1120
BstACI GRCGYC 1 cut(s) 773
BstAPI GCANNNNNTGC 1 cut(s) 75
BstBAI YACGTR 1 cut(s) 963
BstC8I GCNNGC 3 cut(s) 365, 367, 659
BstDEI CTNAG 3 cut(s) 328, 479, 671
BstDSI CCRYGG 1 cut(s) 1060
BstENI CCTNNNNNAGG 1 cut(s) 1208
BstF5I GGATG 3 cut(s) 942, 1186, 1215
BstFNI CGCG 5 cut(s) 363, 365, 367, 639, 1379
BstHHI GCGC 3 cut(s) 365, 367, 369
BstKTI GATC 6 cut(s) 31, 334, 472, 739, 862, 1267
BstMAI GTCTC 1 cut(s) 100
BstMBI GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
BstMWI GCNNNNNNNGC 5 cut(s) 66, 75, 207, 364, 1361
BstNI CCWGG 1 cut(s) 1330
BstNSI RCATGY 1 cut(s) 661
BstSCI CCNGG 2 cut(s) 495, 1328
BstUI CGCG 5 cut(s) 363, 365, 367, 639, 1379
BstV1I GCAGC 1 cut(s) 69
BstX2I RGATCY 1 cut(s) 859
BstYI RGATCY 1 cut(s) 859
BstZ17I GTATAC 1 cut(s) 1287
Bsu15I ATCGAT 1 cut(s) 42
BsuRI GGCC 2 cut(s) 485, 920
BsuTUI ATCGAT 1 cut(s) 42
BtgI CCRYGG 1 cut(s) 1060
BtsCI GGATG 3 cut(s) 942, 1186, 1215
BveI ACCTGC 1 cut(s) 266
Cac8I GCNNGC 3 cut(s) 365, 367, 659
CciI TCATGA 1 cut(s) 838
CfoI GCGC 3 cut(s) 365, 367, 369
Cfr13I GGNCC 2 cut(s) 149, 483
ClaI ATCGAT 1 cut(s) 42
CseI GACGC 1 cut(s) 628
Csp6I GTAC 2 cut(s) 876, 960
CviAII CATG 8 cut(s) 235, 508, 536, 602, 658, 791, 839, 1290
CviQI GTAC 2 cut(s) 876, 960
DdeI CTNAG 3 cut(s) 328, 479, 671
DpnI GATC 6 cut(s) 30, 333, 471, 738, 861, 1266
DpnII GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
DraI TTTAAA 1 cut(s) 952
DraIII CACNNNGTG 1 cut(s) 1380
EaeI YGGCCR 1 cut(s) 918
Eam1104I CTCTTC 3 cut(s) 294, 399, 1120
EarI CTCTTC 3 cut(s) 294, 399, 1120
EciI GGCGGA 1 cut(s) 695
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 1 cut(s) 566
Eco24I GRGCYC 1 cut(s) 327
Eco47I GGWCC 1 cut(s) 149
Eco53kI GAGCTC 1 cut(s) 325
Eco57I CTGAAG 4 cut(s) 67, 423, 637, 804
EcoICRI GAGCTC 1 cut(s) 325
EcoNI CCTNNNNNAGG 1 cut(s) 1208
EcoO109I RGGNCCY 1 cut(s) 483
EcoRII CCWGG 1 cut(s) 1328
EcoT14I CCWWGG 1 cut(s) 566
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 1 cut(s) 566
FaeI CATG 8 cut(s) 238, 511, 539, 605, 661, 794, 842, 1293
FatI CATG 8 cut(s) 234, 507, 535, 601, 657, 790, 838, 1289
FauI CCCGC 1 cut(s) 1227
FblI GTMKAC 1 cut(s) 1286
Fnu4HI GCNGC 1 cut(s) 58
FokI GGATG 3 cut(s) 929, 1193, 1202
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 1 cut(s) 58
FspBI CTAG 2 cut(s) 167, 551
GlaI GCGC 3 cut(s) 364, 366, 368
GluI GCNGC 1 cut(s) 58
GsuI CTGGAG 1 cut(s) 124
HaeIII GGCC 2 cut(s) 485, 920
HapII CCGG 1 cut(s) 497
HgaI GACGC 1 cut(s) 628
HhaI GCGC 3 cut(s) 365, 367, 369
Hin1I GRCGYC 1 cut(s) 773
Hin1II CATG 8 cut(s) 238, 511, 539, 605, 661, 794, 842, 1293
Hin6I GCGC 3 cut(s) 363, 365, 367
HinP1I GCGC 3 cut(s) 363, 365, 367
HincII GTYRAC 3 cut(s) 306, 430, 799
HindII GTYRAC 3 cut(s) 306, 430, 799
HinfI GANTC 5 cut(s) 800, 979, 988, 1369, 1384
HpaII CCGG 1 cut(s) 497
HphI GGTGA 1 cut(s) 1366
Hpy166II GTNNAC 4 cut(s) 306, 430, 799, 1287
Hpy188III TCNNGA 8 cut(s) 50, 103, 167, 415, 839, 970, 983, 1030
Hpy8I GTNNAC 4 cut(s) 306, 430, 799, 1287
HpyAV CCTTC 5 cut(s) 178, 182, 338, 661, 1327
HpyCH4III ACNGT 5 cut(s) 37, 434, 453, 515, 1064
HpyCH4IV ACGT 4 cut(s) 96, 773, 962, 1002
HpyCH4V TGCA 7 cut(s) 78, 283, 380, 727, 1043, 1143, 1251
HpyF10VI GCNNNNNNNGC 5 cut(s) 66, 75, 207, 364, 1361
HpyF3I CTNAG 3 cut(s) 328, 479, 671
HpySE526I ACGT 4 cut(s) 96, 773, 962, 1002
Hsp92I GRCGYC 1 cut(s) 773
Hsp92II CATG 8 cut(s) 238, 511, 539, 605, 661, 794, 842, 1293
HspAI GCGC 3 cut(s) 363, 365, 367
Kzo9I GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
LmnI GCTCC 1 cut(s) 552
Lsp1109I GCAGC 1 cut(s) 69
LweI GCATC 2 cut(s) 87, 709
MaeI CTAG 2 cut(s) 167, 551
MaeII ACGT 4 cut(s) 96, 773, 962, 1002
MaeIII GTNAC 3 cut(s) 464, 1160, 1268
MalI GATC 6 cut(s) 30, 333, 471, 738, 861, 1266
MauBI CGCGCGCG 1 cut(s) 363
MboI GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
MboII GAAGA 7 cut(s) 73, 193, 311, 416, 797, 1107, 1136
MfeI CAATTG 2 cut(s) 715, 1044
MflI RGATCY 1 cut(s) 859
MhlI GDGCHC 2 cut(s) 102, 327
MlsI TGGCCA 1 cut(s) 920
MluCI AATT 9 cut(s) 73, 267, 370, 444, 715, 870, 908, 1044, 1133
MluNI TGGCCA 1 cut(s) 920
MlyI GAGTC 3 cut(s) 794, 1363, 1393
MmeI TCCRAC 3 cut(s) 253, 801, 985
MnlI CCTC 9 cut(s) 170, 191, 409, 634, 638, 1046, 1118, 1171, 1406
Mox20I TGGCCA 1 cut(s) 920
MroXI GAANNNNTTC 2 cut(s) 387, 834
MscI TGGCCA 1 cut(s) 920
MseI TTAA 5 cut(s) 645, 767, 906, 951, 1407
MslI CAYNNNNRTG 2 cut(s) 18, 416
Msp20I TGGCCA 1 cut(s) 920
MspI CCGG 1 cut(s) 497
MspR9I CCNGG 2 cut(s) 497, 1330
MunI CAATTG 2 cut(s) 715, 1044
MvaI CCWGG 1 cut(s) 1330
MvnI CGCG 5 cut(s) 363, 365, 367, 639, 1379
MwoI GCNNNNNNNGC 5 cut(s) 66, 75, 207, 364, 1361
NciI CCSGG 1 cut(s) 497
NdeII GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
NlaIII CATG 8 cut(s) 238, 511, 539, 605, 661, 794, 842, 1293
NlaIV GGNNCC 1 cut(s) 1034
NmuCI GTSAC 1 cut(s) 464
NspI RCATGY 1 cut(s) 661
PaeI GCATGC 1 cut(s) 661
PagI TCATGA 1 cut(s) 838
PauI GCGCGC 2 cut(s) 363, 365
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 57
PdmI GAANNNNTTC 2 cut(s) 387, 834
PfeI GAWTC 2 cut(s) 979, 988
PflMI CCANNNNNTGG 1 cut(s) 235
PkrI GCNGC 1 cut(s) 59
PleI GAGTC 3 cut(s) 794, 1363, 1392
PpsI GAGTC 3 cut(s) 794, 1363, 1392
Ppu21I YACGTR 1 cut(s) 963
Psp124BI GAGCTC 1 cut(s) 327
Psp1406I AACGTT 1 cut(s) 1002
Psp6I CCWGG 1 cut(s) 1328
PspGI CCWGG 1 cut(s) 1328
PspN4I GGNNCC 1 cut(s) 1034
PspPI GGNCC 2 cut(s) 149, 483
PsuI RGATCY 1 cut(s) 859
PteI GCGCGC 2 cut(s) 363, 365
RsaI GTAC 2 cut(s) 877, 961
RsaNI GTAC 2 cut(s) 876, 960
RseI CAYNNNNRTG 2 cut(s) 18, 416
SacI GAGCTC 1 cut(s) 327
SaqAI TTAA 5 cut(s) 645, 767, 906, 951, 1407
SatI GCNGC 1 cut(s) 58
Sau3AI GATC 6 cut(s) 28, 331, 469, 736, 859, 1264
Sau96I GGNCC 2 cut(s) 149, 483
SchI GAGTC 3 cut(s) 794, 1363, 1393
ScrFI CCNGG 2 cut(s) 497, 1330
SduI GDGCHC 2 cut(s) 102, 327
SfaNI GCATC 2 cut(s) 87, 709
SinI GGWCC 1 cut(s) 149
SmiMI CAYNNNNRTG 2 cut(s) 18, 416
SmlI CTYRAG 2 cut(s) 983, 1304
SmoI CTYRAG 2 cut(s) 983, 1304
SphI GCATGC 1 cut(s) 661
Sse9I AATT 9 cut(s) 73, 267, 370, 444, 715, 870, 908, 1044, 1133
SsiI CCGC 7 cut(s) 6, 309, 348, 706, 879, 1220, 1377
SspI AATATT 1 cut(s) 224
SspMI CTAG 2 cut(s) 167, 551
SstI GAGCTC 1 cut(s) 327
StyD4I CCNGG 2 cut(s) 495, 1328
StyI CCWWGG 1 cut(s) 566
TaaI ACNGT 5 cut(s) 37, 434, 453, 515, 1064
TaiI ACGT 4 cut(s) 99, 776, 965, 1005
TaqI TCGA 2 cut(s) 42, 51
TasI AATT 9 cut(s) 73, 267, 370, 444, 715, 870, 908, 1044, 1133
TfiI GAWTC 2 cut(s) 979, 988
Tru1I TTAA 5 cut(s) 645, 767, 906, 951, 1407
Tru9I TTAA 5 cut(s) 645, 767, 906, 951, 1407
TseFI GTSAC 1 cut(s) 464
TseI GCWGC 1 cut(s) 57
Tsp45I GTSAC 1 cut(s) 464
Van91I CCANNNNNTGG 1 cut(s) 235
VpaK11BI GGWCC 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 1208
XapI RAATTY 3 cut(s) 267, 870, 908
XbaI TCTAGA 1 cut(s) 166
XceI RCATGY 1 cut(s) 661
XmiI GTMKAC 1 cut(s) 1286
XmnI GAANNNNTTC 2 cut(s) 387, 834
XspI CTAG 2 cut(s) 167, 551
ZraI GACGTC 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.