Rroxscaffold_5G00336220

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000417
Physical Location & Seq
Reverse (-)
3961759 .. 3963273
1515 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00336220.1

Sequence Viewer

Length: 1515 bp
ATGTCTGCAAATCGTAAAAGTGGTATAGATCATACAGCTATTGATATTATCGATGACCGCGAGAAAAGCGAGAAAAGCAAGAAAAGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACCCAGAAGCATATACACCTGACGTTGTTTCTATTGGACCCTTTCATCATTATCGACAAAAGCGAGGAAAGGAGGACGGTAATGGAGGCAAAGAAGGCAAATGCGAGGAAGATTTCCAGCTCATGGAACGAGTGAAAAACAGCTATTTGAATGAAATTCTCGCAGATATGGGGAATATTACTTTGGAAGAATTGACTACAAAAGTTATTGAGCTCTCAGATCAAAACAACGAAGGTGCCTTTGAGGAACGAGCCCGCAATTTTTATGCAGAACCACTTGATCATATTTCTTCCAAAGACTTCATTGAGATGATGATAGTTGACGCTTGCTTCCTAGTTCAACTGTTTCGGAAGTCTAACGATCCGAAACTCAGGGCCTTTGATGACCCGGTGTTCAATATGGACTGTATGTTTCATTTCCTATGCCACGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACAGTTTGTATGGCCATATTATCCACAGTTTGTATGGCCATACCGTAGATATAAATCCTAGTGAAGCTTCCTTCTCTATTCTCATCCTGAAAGCGCTCAGCGTACTACCCTCACTGAAGCATAGTTGCTCAACCTATAAAACGCATCTCAAGAAAAACAAGTGTCATTGTGATGCTCATGTTCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAACGACTATAGAAGAGAGAGCGCACAAAGCAACTGGTAAAGAAGGTATATCCAGCCCTGAAGAACATCAAGTGCACACTGGGAACAAAGGCAAGAGAGACAATAAAGCTGTCCATGAAGACCCAGATCAACATCAAATTCGTACCGCAACCGCACTGTCAAAGGCAGACATTAAATTCGAAAAAGTCGAAAGGGAGAGCATAATGGACATTCGATTCAACAAGGGTGGGTGGTTCAGGAATGGGATTCTTGAGATTCCACAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATGGTTATTCAAATGAGATAACGTCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAATGAGGATATGGAATTACTTTGCAAGGAAAAAGTAATTGGTAACTGGATGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAATCTTTACAAGGACATCCCGCACGAGAAGTTCTACTATGTTGAGCTGTGCGAAAAAGTGAATGATTGTTACAGATCGAAATGGTTTACATGGTTGGCTTTACTCAAGAGTGAAAAATTTTCTAACCCTTGGAGAATTTTGGCTTTCGGGATAGGTATTATCGTTTTGACTCTCACCTCGTGGAACGCGGCAAACAACATTCGGATTCACTGGCACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

504

Amino Acids

58.17

Weight (kDa)

6.4

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 33 - 489 5.6e-100 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 365
AccB7I CCANNNNNTGG 1 cut(s) 253
AccII CGCG 2 cut(s) 60, 1481
AccIII TCCGGA 1 cut(s) 120
AciI CCGC 6 cut(s) 58, 385, 972, 978, 1313, 1481
AclI AACGTT 1 cut(s) 1095
AclWI GGATC 1 cut(s) 485
AcoI YGGCCR 2 cut(s) 613, 637
AcsI RAATTY 5 cut(s) 285, 963, 1001, 1409, 1428
AcuI CTGAAG 4 cut(s) 85, 737, 906, 1273
AdeI CACNNNGTG 1 cut(s) 1473
AfaI GTAC 2 cut(s) 705, 970
AfeI AGCGCT 1 cut(s) 696
AfiI CCNNNNNNNGG 1 cut(s) 253
AgsI TTSAA 6 cut(s) 280, 470, 526, 1045, 1164, 1212
AjuI GAANNNNNNNTTGG 4 cut(s) 296, 328, 1233, 1265
AluBI AGCT 9 cut(s) 38, 250, 273, 343, 668, 809, 935, 1090, 1339
AluI AGCT 9 cut(s) 38, 250, 273, 343, 668, 809, 935, 1090, 1339
Alw21I GWGCWC 3 cut(s) 120, 345, 903
Alw26I GTCTC 2 cut(s) 118, 918
Alw44I GTGCAC 1 cut(s) 899
AlwI GGATC 1 cut(s) 485
Aor13HI TCCGGA 1 cut(s) 120
Aor51HI AGCGCT 1 cut(s) 696
AoxI GGCC 3 cut(s) 504, 613, 637
ApaLI GTGCAC 1 cut(s) 899
ApoI RAATTY 5 cut(s) 285, 963, 1001, 1409, 1428
ArsI GACNNNNNNTTYG 2 cut(s) 986, 1018
AspLEI GCGC 2 cut(s) 697, 850
AspS9I GGNCC 2 cut(s) 167, 504
AsuC2I CCSGG 1 cut(s) 518
AsuHPI GGTGA 1 cut(s) 1459
AsuII TTCGAA 1 cut(s) 1005
AvaII GGWCC 1 cut(s) 167
BaeGI GKGCMC 1 cut(s) 903
BalI TGGCCA 2 cut(s) 615, 639
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 2 cut(s) 345, 385
BauI CACGAG 2 cut(s) 1316, 1471
BbsI GAAGAC 1 cut(s) 951
Bbv12I GWGCWC 3 cut(s) 120, 345, 903
BccI CCATC 2 cut(s) 1193, 1268
BclI TGATCA 1 cut(s) 409
BcnI CCSGG 1 cut(s) 518
BcoDI GTCTC 2 cut(s) 118, 918
BfaI CTAG 3 cut(s) 464, 572, 660
BfmI CTRYAG 1 cut(s) 834
BfoI RGCGCY 1 cut(s) 698
BisI GCNGC 1 cut(s) 1482
BlpI GCTNAGC 1 cut(s) 698
BlsI GCNGC 1 cut(s) 1483
Bme1390I CCNGG 1 cut(s) 518
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 167, 504
BmiI GGNNCC 3 cut(s) 169, 367, 1127
BmrFI CCNGG 1 cut(s) 518
BmrI ACTGGG 1 cut(s) 915
BmsI GCATC 3 cut(s) 105, 754, 763
BmuI ACTGGG 1 cut(s) 915
BpiI GAAGAC 1 cut(s) 951
Bpu1102I GCTNAGC 1 cut(s) 698
Bpu14I TTCGAA 1 cut(s) 1005
BpuEI CTTGAG 3 cut(s) 734, 1097, 1382
BpuMI CCSGG 1 cut(s) 518
Bsa29I ATCGAT 1 cut(s) 51
BsaBI GATNNNNATC 2 cut(s) 654, 957
BsaJI CCNNGG 3 cut(s) 587, 1153, 1421
BsaWI WCCGGW 1 cut(s) 120
Bsc4I CCNNNNNNNGG 1 cut(s) 253
Bse1I ACTGG 4 cut(s) 865, 910, 1262, 1508
Bse3DI GCAATG 2 cut(s) 1131, 1151
Bse8I GATNNNNATC 2 cut(s) 654, 957
BseAI TCCGGA 1 cut(s) 120
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 3 cut(s) 587, 1153, 1421
BseGI GGATG 3 cut(s) 684, 1266, 1308
BseJI GATNNNNATC 2 cut(s) 654, 957
BseLI CCNNNNNNNGG 1 cut(s) 253
BseMI GCAATG 2 cut(s) 1131, 1151
BseMII CTCAG 3 cut(s) 360, 514, 712
BseNI ACTGG 4 cut(s) 865, 910, 1262, 1508
BseSI GKGCMC 1 cut(s) 903
BsgI GTGCAG 1 cut(s) 770
Bsh1236I CGCG 2 cut(s) 60, 1481
BshFI GGCC 3 cut(s) 506, 615, 639
BshNI GGYRCC 1 cut(s) 365
BshVI ATCGAT 1 cut(s) 51
BsiHKAI GWGCWC 3 cut(s) 120, 345, 903
BsiSI CCGG 2 cut(s) 121, 518
BslI CCNNNNNNNGG 1 cut(s) 253
BsmAI GTCTC 2 cut(s) 118, 918
BsnI GGCC 3 cut(s) 506, 615, 639
Bsp119I TTCGAA 1 cut(s) 1005
Bsp1286I GDGCHC 4 cut(s) 120, 345, 385, 903
Bsp13I TCCGGA 1 cut(s) 120
Bsp143I GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
Bsp1720I GCTNAGC 1 cut(s) 698
Bsp19I CCATGG 1 cut(s) 1153
BspACI CCGC 6 cut(s) 58, 385, 972, 978, 1313, 1481
BspANI GGCC 3 cut(s) 506, 615, 639
BspCNI CTCAG 3 cut(s) 359, 513, 711
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 120
BspFNI CGCG 2 cut(s) 60, 1481
BspLI GGNNCC 3 cut(s) 169, 367, 1127
BspPI GGATC 1 cut(s) 485
BspT104I TTCGAA 1 cut(s) 1005
BspT107I GGYRCC 1 cut(s) 365
BsrDI GCAATG 2 cut(s) 1131, 1151
BsrI ACTGG 4 cut(s) 865, 910, 1262, 1508
BssECI CCNNGG 3 cut(s) 587, 1153, 1421
BssMI GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
BssSI CACGAG 2 cut(s) 1316, 1471
BssT1I CCWWGG 3 cut(s) 587, 1153, 1421
Bst2BI CACGAG 2 cut(s) 1316, 1471
Bst4CI ACNGT 7 cut(s) 209, 474, 536, 605, 629, 646, 984
Bst6I CTCTTC 2 cut(s) 834, 1213
BstAPI GCANNNNNTGC 1 cut(s) 93
BstBI TTCGAA 1 cut(s) 1005
BstC8I GCNNGC 2 cut(s) 385, 457
BstDEI CTNAG 3 cut(s) 346, 500, 698
BstDSI CCRYGG 1 cut(s) 1153
BstF5I GGATG 3 cut(s) 684, 1266, 1308
BstFNI CGCG 2 cut(s) 60, 1481
BstH2I RGCGCY 1 cut(s) 698
BstHHI GCGC 2 cut(s) 697, 850
BstKTI GATC 7 cut(s) 31, 352, 412, 493, 799, 955, 1370
BstMAI GTCTC 2 cut(s) 118, 918
BstMBI GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
BstMWI GCNNNNNNNGC 6 cut(s) 66, 75, 84, 93, 225, 854
BstSCI CCNGG 1 cut(s) 516
BstSFI CTRYAG 1 cut(s) 834
BstSLI GKGCMC 1 cut(s) 903
BstUI CGCG 2 cut(s) 60, 1481
BstV2I GAAGAC 1 cut(s) 951
BstXI CCANNNNNNTGG 1 cut(s) 1192
Bsu15I ATCGAT 1 cut(s) 51
BsuRI GGCC 3 cut(s) 506, 615, 639
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 1 cut(s) 1153
BtsCI GGATG 3 cut(s) 684, 1266, 1308
BtsIMutI CAGTG 4 cut(s) 713, 903, 980, 1501
Cac8I GCNNGC 2 cut(s) 385, 457
CfoI GCGC 2 cut(s) 697, 850
Cfr13I GGNCC 2 cut(s) 167, 504
ClaI ATCGAT 1 cut(s) 51
CseI GACGC 1 cut(s) 461
Csp6I GTAC 2 cut(s) 704, 969
CspCI CAANNNNNGTGG 2 cut(s) 1033, 1068
CviAII CATG 5 cut(s) 253, 779, 941, 1154, 1383
CviQI GTAC 2 cut(s) 704, 969
DdeI CTNAG 3 cut(s) 346, 500, 698
DpnI GATC 7 cut(s) 30, 351, 411, 492, 798, 954, 1369
DpnII GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
DraIII CACNNNGTG 1 cut(s) 1473
EaeI YGGCCR 2 cut(s) 613, 637
Eam1104I CTCTTC 2 cut(s) 834, 1213
EarI CTCTTC 2 cut(s) 834, 1213
Ecl136II GAGCTC 1 cut(s) 343
Eco130I CCWWGG 3 cut(s) 587, 1153, 1421
Eco24I GRGCYC 2 cut(s) 345, 385
Eco47I GGWCC 1 cut(s) 167
Eco47III AGCGCT 1 cut(s) 696
Eco53kI GAGCTC 1 cut(s) 343
Eco57I CTGAAG 4 cut(s) 85, 737, 906, 1273
EcoICRI GAGCTC 1 cut(s) 343
EcoO109I RGGNCCY 1 cut(s) 504
EcoT14I CCWWGG 3 cut(s) 587, 1153, 1421
EcoT22I ATGCAT 1 cut(s) 98
EcoT38I GRGCYC 2 cut(s) 345, 385
ErhI CCWWGG 3 cut(s) 587, 1153, 1421
FaeI CATG 5 cut(s) 256, 782, 944, 1157, 1386
FatI CATG 5 cut(s) 252, 778, 940, 1153, 1382
FauI CCCGC 2 cut(s) 392, 1320
FbaI TGATCA 1 cut(s) 409
Fnu4HI GCNGC 1 cut(s) 1482
FokI GGATG 3 cut(s) 671, 1273, 1295
FriOI GRGCYC 2 cut(s) 345, 385
Fsp4HI GCNGC 1 cut(s) 1482
FspBI CTAG 3 cut(s) 464, 572, 660
GlaI GCGC 2 cut(s) 696, 849
GluI GCNGC 1 cut(s) 1482
HaeII RGCGCY 1 cut(s) 698
HaeIII GGCC 3 cut(s) 506, 615, 639
HapII CCGG 2 cut(s) 121, 518
HgaI GACGC 1 cut(s) 461
HhaI GCGC 2 cut(s) 697, 850
Hin1II CATG 5 cut(s) 256, 782, 944, 1157, 1386
Hin6I GCGC 2 cut(s) 695, 848
HinP1I GCGC 2 cut(s) 695, 848
HincII GTYRAC 1 cut(s) 451
HindII GTYRAC 1 cut(s) 451
HindIII AAGCTT 1 cut(s) 666
HinfI GANTC 6 cut(s) 577, 1041, 1072, 1081, 1462, 1498
HpaII CCGG 2 cut(s) 121, 518
HphI GGTGA 1 cut(s) 1459
Hpy166II GTNNAC 3 cut(s) 451, 901, 1380
Hpy188I TCNGA 6 cut(s) 104, 349, 480, 495, 1111, 1497
Hpy188III TCNNGA 8 cut(s) 121, 688, 751, 1063, 1076, 1123, 1399, 1441
Hpy8I GTNNAC 3 cut(s) 451, 901, 1380
HpyAV CCTTC 4 cut(s) 218, 356, 682, 863
HpyCH4III ACNGT 7 cut(s) 209, 474, 536, 605, 629, 646, 984
HpyCH4IV ACGT 4 cut(s) 114, 153, 1095, 1175
HpyCH4V TGCA 7 cut(s) 8, 96, 398, 787, 901, 1136, 1236
HpyF10VI GCNNNNNNNGC 6 cut(s) 66, 75, 84, 93, 225, 854
HpyF3I CTNAG 3 cut(s) 346, 500, 698
HpySE526I ACGT 4 cut(s) 114, 153, 1095, 1175
Hsp92II CATG 5 cut(s) 256, 782, 944, 1157, 1386
HspAI GCGC 2 cut(s) 695, 848
Kpn2I TCCGGA 1 cut(s) 120
Ksp22I TGATCA 1 cut(s) 409
Kzo9I GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
LmnI GCTCC 2 cut(s) 123, 573
LweI GCATC 3 cut(s) 105, 754, 763
MaeI CTAG 3 cut(s) 464, 572, 660
MaeII ACGT 4 cut(s) 114, 153, 1095, 1175
MaeIII GTNAC 2 cut(s) 1253, 1361
MalI GATC 7 cut(s) 30, 351, 411, 492, 798, 954, 1369
MboI GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
MfeI CAATTG 1 cut(s) 1137
MhlI GDGCHC 4 cut(s) 120, 345, 385, 903
MlsI TGGCCA 2 cut(s) 615, 639
MluNI TGGCCA 2 cut(s) 615, 639
MlyI GAGTC 1 cut(s) 1456
MmeI TCCRAC 1 cut(s) 1078
Mox20I TGGCCA 2 cut(s) 615, 639
Mph1103I ATGCAT 1 cut(s) 98
MroI TCCGGA 1 cut(s) 120
MscI TGGCCA 2 cut(s) 615, 639
MseI TTAA 2 cut(s) 827, 999
MslI CAYNNNNRTG 3 cut(s) 437, 771, 1190
Msp20I TGGCCA 2 cut(s) 615, 639
MspI CCGG 2 cut(s) 121, 518
MspR9I CCNGG 1 cut(s) 518
MunI CAATTG 1 cut(s) 1137
MvnI CGCG 2 cut(s) 60, 1481
MwoI GCNNNNNNNGC 6 cut(s) 66, 75, 84, 93, 225, 854
NciI CCSGG 1 cut(s) 518
NcoI CCATGG 1 cut(s) 1153
NdeII GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
NlaIII CATG 5 cut(s) 256, 782, 944, 1157, 1386
NlaIV GGNNCC 3 cut(s) 169, 367, 1127
NsiI ATGCAT 1 cut(s) 98
NspV TTCGAA 1 cut(s) 1005
PcsI WCGNNNNNNNCGW 3 cut(s) 57, 190, 1011
PfeI GAWTC 5 cut(s) 577, 1041, 1072, 1081, 1498
PflMI CCANNNNNTGG 1 cut(s) 253
PkrI GCNGC 1 cut(s) 1483
PleI GAGTC 1 cut(s) 1456
PpsI GAGTC 1 cut(s) 1456
Psp124BI GAGCTC 1 cut(s) 345
Psp1406I AACGTT 1 cut(s) 1095
PspN4I GGNNCC 3 cut(s) 169, 367, 1127
PspPI GGNCC 2 cut(s) 167, 504
RsaI GTAC 2 cut(s) 705, 970
RsaNI GTAC 2 cut(s) 704, 969
RseI CAYNNNNRTG 3 cut(s) 437, 771, 1190
SacI GAGCTC 1 cut(s) 345
SaqAI TTAA 2 cut(s) 827, 999
SatI GCNGC 1 cut(s) 1482
Sau3AI GATC 7 cut(s) 28, 349, 409, 490, 796, 952, 1367
Sau96I GGNCC 2 cut(s) 167, 504
SchI GAGTC 1 cut(s) 1456
ScrFI CCNGG 1 cut(s) 518
SduI GDGCHC 4 cut(s) 120, 345, 385, 903
SfaNI GCATC 3 cut(s) 105, 754, 763
SfcI CTRYAG 1 cut(s) 834
SfuI TTCGAA 1 cut(s) 1005
SinI GGWCC 1 cut(s) 167
SmiMI CAYNNNNRTG 3 cut(s) 437, 771, 1190
SmlI CTYRAG 3 cut(s) 749, 1076, 1397
SmoI CTYRAG 3 cut(s) 749, 1076, 1397
SsiI CCGC 6 cut(s) 58, 385, 972, 978, 1313, 1481
SspI AATATT 1 cut(s) 307
SspMI CTAG 3 cut(s) 464, 572, 660
SstI GAGCTC 1 cut(s) 345
StyD4I CCNGG 1 cut(s) 516
StyI CCWWGG 3 cut(s) 587, 1153, 1421
TaaI ACNGT 7 cut(s) 209, 474, 536, 605, 629, 646, 984
TaiI ACGT 4 cut(s) 117, 156, 1098, 1178
TaqI TCGA 6 cut(s) 51, 184, 1005, 1014, 1039, 1370
TauI GCSGC 1 cut(s) 1484
TfiI GAWTC 5 cut(s) 577, 1041, 1072, 1081, 1498
Tru1I TTAA 2 cut(s) 827, 999
Tru9I TTAA 2 cut(s) 827, 999
TscAI CASTG 4 cut(s) 720, 910, 987, 1508
TspDTI ATGAA 6 cut(s) 164, 297, 421, 533, 957, 1284
TspRI CASTG 4 cut(s) 720, 910, 987, 1508
Van91I CCANNNNNTGG 1 cut(s) 253
VneI GTGCAC 1 cut(s) 899
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 5 cut(s) 285, 963, 1001, 1409, 1428
XcmI CCANNNNNNNNNTGG 2 cut(s) 608, 632
XspI CTAG 3 cut(s) 464, 572, 660
Zsp2I ATGCAT 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.