Rh4DG025000

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000417
Physical Location & Seq
Reverse (-)
4627917 .. 4629886
1970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG025000.1

Sequence Viewer

Length: 1506 bp
ATGTCTGCAAATCGTAAAACTGGTAGAGATCATACAGTTATTGATATTATCGATGACCGCAAGAAAAGCAAGAAATGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACCCAGAAGCATATACACCTGACGTTGTTTCTATTGGACCCTTCCATCATTATCGACAAAAGCGAAGAAAGGAGGACGGTAATGGAGGCAAAGAAGGCAAATGTGAGGAAGATTTCCAACTCATGGAACGAGTGAAAAACAGCTATTTGAATGAAATTCTCGCAGATATGAAGACTATTACTTTGGAAGAGTTGACTGCAAAAGTTATTGAGCTCTCAGATCAAAAGAATGAAGGTGCCTTTGAGGAACGAGCCCGCAATTTTTATGCAGAACCACTTGATCATATTTCTTCCAAAGACTTCATTGAGATGATGATAGTTGACGGTTGCTTCCTAGTTCAACTGTTTCGGAAGTTTAACGATCCGAAACTCAGGGCCTTTGATGACCCGGTGTTCAACATGGACTGTATGTTTCATTTCCTATGCCACGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGATCATATTATCCACAGTTCGCATGGCCATACCCTAGATATAAACCCTGGTGAAGCTTCCCTCTCTATTCTCATCCTGAAAGCGCTCAGCATACTACCCTCACTGAAGCATAGTTGCGCAACCTATAAAACGCATCTCAAGAAAAACAAGTGTCATTGTGATGCTCATGTTCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAACGACCATAGAAGAGAGAGCGCATAAAGCAACAGGTAAAGAAGGTACATCCAGCCCTGAAGAACATCAAGTGCACACTGGGAACAAAGACAAGAGAGACAATAAAGCTGTCCATGAAGACCCAGATCAACATCAAATTCGTACCGCAACCGCACTGTCAAAGGCAGACATTAAATTCGAAAAAGTCGAAAGGGAGAGCATAATGGACATTCGATTCAACAAGGGTGGGTGGTTCAGGAATGGGATTCTTGAGATTCCACAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATAGTTATTCAAATGAGATAACGTCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAATGAGGATATGGAATTACTTTGCAAGGAAAAAGTAATTGGTAACTGGATGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAATCTTTACAAGGACATCCCGCACGAGAAGTTCTACTATGTTGAGCTGTGCGAAAAAGTGAATGATTGTTACAGATCGAAATGGTTTACATGGTTGGCTTTACTCAAGAGTGAAAAATTTTCTAACCCTTGGAGAATTTTGGCTTTCGGGATAGGTATTATCGTTTTGACTCTCACCTCGTGGAACGCGGCAAACAACATTCGGATTCACTGGCACAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

501

Amino Acids

58.17

Weight (kDa)

6.8

Isoelectric Point (pI)

46.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 30 - 486 1.7e-100 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 721
AccB1I GGYRCC 1 cut(s) 356
AccB7I CCANNNNNTGG 1 cut(s) 244
AccII CGCG 1 cut(s) 1472
AccIII TCCGGA 1 cut(s) 111
AciI CCGC 6 cut(s) 58, 376, 963, 969, 1304, 1472
AclI AACGTT 1 cut(s) 1086
AclWI GGATC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 628
AcsI RAATTY 5 cut(s) 276, 954, 992, 1400, 1419
AcuI CTGAAG 4 cut(s) 76, 728, 897, 1264
AdeI CACNNNGTG 1 cut(s) 1464
AfaI GTAC 2 cut(s) 865, 961
AfeI AGCGCT 1 cut(s) 687
AfiI CCNNNNNNNGG 1 cut(s) 244
AgsI TTSAA 6 cut(s) 271, 461, 517, 1036, 1155, 1203
AjnI CCWGG 1 cut(s) 649
AjuI GAANNNNNNNTTGG 2 cut(s) 1224, 1256
AluBI AGCT 7 cut(s) 264, 334, 659, 800, 926, 1081, 1330
AluI AGCT 7 cut(s) 264, 334, 659, 800, 926, 1081, 1330
Alw21I GWGCWC 3 cut(s) 111, 336, 894
Alw26I GTCTC 2 cut(s) 109, 909
Alw44I GTGCAC 1 cut(s) 890
AlwI GGATC 1 cut(s) 476
Aor13HI TCCGGA 1 cut(s) 111
Aor51HI AGCGCT 1 cut(s) 687
AoxI GGCC 2 cut(s) 495, 628
ApaLI GTGCAC 1 cut(s) 890
ApoI RAATTY 5 cut(s) 276, 954, 992, 1400, 1419
ArsI GACNNNNNNTTYG 4 cut(s) 286, 318, 977, 1009
AspLEI GCGC 3 cut(s) 688, 722, 841
AspS9I GGNCC 2 cut(s) 158, 495
AsuC2I CCSGG 1 cut(s) 509
AsuHPI GGTGA 2 cut(s) 665, 1450
AsuII TTCGAA 1 cut(s) 996
AvaII GGWCC 1 cut(s) 158
BaeGI GKGCMC 1 cut(s) 894
BalI TGGCCA 1 cut(s) 630
BanI GGYRCC 1 cut(s) 356
BanII GRGCYC 2 cut(s) 336, 376
BauI CACGAG 2 cut(s) 1307, 1462
BbsI GAAGAC 2 cut(s) 299, 942
Bbv12I GWGCWC 3 cut(s) 111, 336, 894
BccI CCATC 3 cut(s) 174, 1184, 1259
BciT130I CCWGG 1 cut(s) 651
BclI TGATCA 2 cut(s) 400, 604
BcnI CCSGG 1 cut(s) 509
BcoDI GTCTC 2 cut(s) 109, 909
BfaI CTAG 3 cut(s) 455, 563, 638
BfoI RGCGCY 1 cut(s) 689
BisI GCNGC 1 cut(s) 1473
BlpI GCTNAGC 1 cut(s) 689
BlsI GCNGC 1 cut(s) 1474
Bme1390I CCNGG 2 cut(s) 509, 651
Bme18I GGWCC 1 cut(s) 158
BmgT120I GGNCC 2 cut(s) 158, 495
BmiI GGNNCC 3 cut(s) 160, 358, 1118
BmrFI CCNGG 2 cut(s) 509, 651
BmrI ACTGGG 1 cut(s) 906
BmsI GCATC 3 cut(s) 96, 745, 754
BmuI ACTGGG 1 cut(s) 906
BpiI GAAGAC 2 cut(s) 299, 942
Bpu1102I GCTNAGC 1 cut(s) 689
Bpu14I TTCGAA 1 cut(s) 996
BpuEI CTTGAG 3 cut(s) 725, 1088, 1373
BpuMI CCSGG 1 cut(s) 509
Bsa29I ATCGAT 1 cut(s) 51
BsaBI GATNNNNATC 1 cut(s) 948
BsaJI CCNNGG 3 cut(s) 578, 649, 1412
BsaWI WCCGGW 1 cut(s) 111
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse1I ACTGG 4 cut(s) 25, 901, 1253, 1499
Bse3DI GCAATG 2 cut(s) 1122, 1142
Bse8I GATNNNNATC 1 cut(s) 948
BseAI TCCGGA 1 cut(s) 111
BseBI CCWGG 1 cut(s) 651
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 3 cut(s) 578, 649, 1412
BseGI GGATG 4 cut(s) 675, 866, 1257, 1299
BseJI GATNNNNATC 1 cut(s) 948
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMI GCAATG 2 cut(s) 1122, 1142
BseMII CTCAG 3 cut(s) 351, 505, 703
BseNI ACTGG 4 cut(s) 25, 901, 1253, 1499
BseSI GKGCMC 1 cut(s) 894
BsgI GTGCAG 1 cut(s) 761
Bsh1236I CGCG 1 cut(s) 1472
BshFI GGCC 2 cut(s) 497, 630
BshNI GGYRCC 1 cut(s) 356
BshVI ATCGAT 1 cut(s) 51
BsiHKAI GWGCWC 3 cut(s) 111, 336, 894
BsiSI CCGG 2 cut(s) 112, 509
BslI CCNNNNNNNGG 1 cut(s) 244
BsmAI GTCTC 2 cut(s) 109, 909
BsnI GGCC 2 cut(s) 497, 630
Bsp119I TTCGAA 1 cut(s) 996
Bsp1286I GDGCHC 4 cut(s) 111, 336, 376, 894
Bsp13I TCCGGA 1 cut(s) 111
Bsp143I GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
Bsp1720I GCTNAGC 1 cut(s) 689
BspACI CCGC 6 cut(s) 58, 376, 963, 969, 1304, 1472
BspANI GGCC 2 cut(s) 497, 630
BspCNI CTCAG 3 cut(s) 350, 504, 702
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 111
BspFNI CGCG 1 cut(s) 1472
BspLI GGNNCC 3 cut(s) 160, 358, 1118
BspPI GGATC 1 cut(s) 476
BspT104I TTCGAA 1 cut(s) 996
BspT107I GGYRCC 1 cut(s) 356
BsrDI GCAATG 2 cut(s) 1122, 1142
BsrI ACTGG 4 cut(s) 25, 901, 1253, 1499
BssECI CCNNGG 3 cut(s) 578, 649, 1412
BssMI GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
BssSI CACGAG 2 cut(s) 1307, 1462
BssT1I CCWWGG 2 cut(s) 578, 1412
Bst2BI CACGAG 2 cut(s) 1307, 1462
Bst2UI CCWGG 1 cut(s) 651
Bst4CI ACNGT 7 cut(s) 37, 200, 446, 465, 527, 620, 975
Bst6I CTCTTC 3 cut(s) 303, 825, 1204
BstAPI GCANNNNNTGC 2 cut(s) 75, 84
BstBI TTCGAA 1 cut(s) 996
BstC8I GCNNGC 1 cut(s) 376
BstDEI CTNAG 3 cut(s) 337, 491, 689
BstF5I GGATG 4 cut(s) 675, 866, 1257, 1299
BstFNI CGCG 1 cut(s) 1472
BstH2I RGCGCY 1 cut(s) 689
BstHHI GCGC 3 cut(s) 688, 722, 841
BstKTI GATC 8 cut(s) 31, 343, 403, 484, 607, 790, 946, 1361
BstMAI GTCTC 2 cut(s) 109, 909
BstMBI GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
BstMWI GCNNNNNNNGC 5 cut(s) 66, 75, 84, 216, 845
BstNI CCWGG 1 cut(s) 651
BstSCI CCNGG 2 cut(s) 507, 649
BstSLI GKGCMC 1 cut(s) 894
BstUI CGCG 1 cut(s) 1472
BstV2I GAAGAC 2 cut(s) 299, 942
BstXI CCANNNNNNTGG 1 cut(s) 1183
Bsu15I ATCGAT 1 cut(s) 51
BsuRI GGCC 2 cut(s) 497, 630
BsuTUI ATCGAT 1 cut(s) 51
BtsCI GGATG 4 cut(s) 675, 866, 1257, 1299
BtsIMutI CAGTG 4 cut(s) 704, 894, 971, 1492
Cac8I GCNNGC 1 cut(s) 376
CfoI GCGC 3 cut(s) 688, 722, 841
Cfr13I GGNCC 2 cut(s) 158, 495
ClaI ATCGAT 1 cut(s) 51
Csp6I GTAC 2 cut(s) 864, 960
CspCI CAANNNNNGTGG 2 cut(s) 1024, 1059
CviAII CATG 6 cut(s) 244, 520, 626, 770, 932, 1374
CviQI GTAC 2 cut(s) 864, 960
DdeI CTNAG 3 cut(s) 337, 491, 689
DpnI GATC 8 cut(s) 30, 342, 402, 483, 606, 789, 945, 1360
DpnII GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
DraIII CACNNNGTG 1 cut(s) 1464
EaeI YGGCCR 1 cut(s) 628
Eam1104I CTCTTC 3 cut(s) 303, 825, 1204
EarI CTCTTC 3 cut(s) 303, 825, 1204
Ecl136II GAGCTC 1 cut(s) 334
Eco130I CCWWGG 2 cut(s) 578, 1412
Eco24I GRGCYC 2 cut(s) 336, 376
Eco47I GGWCC 1 cut(s) 158
Eco47III AGCGCT 1 cut(s) 687
Eco53kI GAGCTC 1 cut(s) 334
Eco57I CTGAAG 4 cut(s) 76, 728, 897, 1264
EcoICRI GAGCTC 1 cut(s) 334
EcoO109I RGGNCCY 1 cut(s) 495
EcoRII CCWGG 1 cut(s) 649
EcoT14I CCWWGG 2 cut(s) 578, 1412
EcoT22I ATGCAT 1 cut(s) 89
EcoT38I GRGCYC 2 cut(s) 336, 376
ErhI CCWWGG 2 cut(s) 578, 1412
FaeI CATG 6 cut(s) 247, 523, 629, 773, 935, 1377
FatI CATG 6 cut(s) 243, 519, 625, 769, 931, 1373
FauI CCCGC 2 cut(s) 383, 1311
FbaI TGATCA 2 cut(s) 400, 604
Fnu4HI GCNGC 1 cut(s) 1473
FokI GGATG 4 cut(s) 662, 853, 1264, 1286
FriOI GRGCYC 2 cut(s) 336, 376
Fsp4HI GCNGC 1 cut(s) 1473
FspBI CTAG 3 cut(s) 455, 563, 638
FspI TGCGCA 1 cut(s) 721
GlaI GCGC 3 cut(s) 687, 721, 840
GluI GCNGC 1 cut(s) 1473
HaeII RGCGCY 1 cut(s) 689
HaeIII GGCC 2 cut(s) 497, 630
HapII CCGG 2 cut(s) 112, 509
HhaI GCGC 3 cut(s) 688, 722, 841
Hin1II CATG 6 cut(s) 247, 523, 629, 773, 935, 1377
Hin6I GCGC 3 cut(s) 686, 720, 839
HinP1I GCGC 3 cut(s) 686, 720, 839
HincII GTYRAC 2 cut(s) 315, 442
HindII GTYRAC 2 cut(s) 315, 442
HindIII AAGCTT 1 cut(s) 657
HinfI GANTC 6 cut(s) 568, 1032, 1063, 1072, 1453, 1489
HpaII CCGG 2 cut(s) 112, 509
HphI GGTGA 2 cut(s) 665, 1450
Hpy166II GTNNAC 4 cut(s) 315, 442, 892, 1371
Hpy188I TCNGA 6 cut(s) 95, 340, 471, 486, 1102, 1488
Hpy188III TCNNGA 8 cut(s) 112, 679, 742, 1054, 1067, 1114, 1390, 1432
Hpy8I GTNNAC 4 cut(s) 315, 442, 892, 1371
HpyAV CCTTC 4 cut(s) 172, 209, 347, 854
HpyCH4III ACNGT 7 cut(s) 37, 200, 446, 465, 527, 620, 975
HpyCH4IV ACGT 4 cut(s) 105, 144, 1086, 1166
HpyCH4V TGCA 9 cut(s) 8, 78, 87, 320, 389, 778, 892, 1127, 1227
HpyF10VI GCNNNNNNNGC 5 cut(s) 66, 75, 84, 216, 845
HpyF3I CTNAG 3 cut(s) 337, 491, 689
HpySE526I ACGT 4 cut(s) 105, 144, 1086, 1166
Hsp92II CATG 6 cut(s) 247, 523, 629, 773, 935, 1377
HspAI GCGC 3 cut(s) 686, 720, 839
Kpn2I TCCGGA 1 cut(s) 111
Ksp22I TGATCA 2 cut(s) 400, 604
Kzo9I GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
LmnI GCTCC 2 cut(s) 114, 564
LweI GCATC 3 cut(s) 96, 745, 754
MaeI CTAG 3 cut(s) 455, 563, 638
MaeII ACGT 4 cut(s) 105, 144, 1086, 1166
MaeIII GTNAC 2 cut(s) 1244, 1352
MalI GATC 8 cut(s) 30, 342, 402, 483, 606, 789, 945, 1360
MboI GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
MfeI CAATTG 1 cut(s) 1128
MhlI GDGCHC 4 cut(s) 111, 336, 376, 894
MlsI TGGCCA 1 cut(s) 630
MluCI AATT 9 cut(s) 276, 379, 954, 992, 1128, 1217, 1239, 1400, 1419
MluNI TGGCCA 1 cut(s) 630
MlyI GAGTC 1 cut(s) 1447
MmeI TCCRAC 2 cut(s) 262, 1069
Mox20I TGGCCA 1 cut(s) 630
Mph1103I ATGCAT 1 cut(s) 89
MroI TCCGGA 1 cut(s) 111
MscI TGGCCA 1 cut(s) 630
MseI TTAA 3 cut(s) 477, 818, 990
MslI CAYNNNNRTG 3 cut(s) 428, 762, 1181
Msp20I TGGCCA 1 cut(s) 630
MspI CCGG 2 cut(s) 112, 509
MspR9I CCNGG 2 cut(s) 509, 651
MunI CAATTG 1 cut(s) 1128
MvaI CCWGG 1 cut(s) 651
MvnI CGCG 1 cut(s) 1472
MwoI GCNNNNNNNGC 5 cut(s) 66, 75, 84, 216, 845
NciI CCSGG 1 cut(s) 509
NdeII GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
NlaIII CATG 6 cut(s) 247, 523, 629, 773, 935, 1377
NlaIV GGNNCC 3 cut(s) 160, 358, 1118
NsbI TGCGCA 1 cut(s) 721
NsiI ATGCAT 1 cut(s) 89
NspV TTCGAA 1 cut(s) 996
PcsI WCGNNNNNNNCGW 2 cut(s) 181, 1002
PfeI GAWTC 5 cut(s) 568, 1032, 1063, 1072, 1489
PflMI CCANNNNNTGG 1 cut(s) 244
PkrI GCNGC 1 cut(s) 1474
PleI GAGTC 1 cut(s) 1447
PpsI GAGTC 1 cut(s) 1447
Psp124BI GAGCTC 1 cut(s) 336
Psp1406I AACGTT 1 cut(s) 1086
Psp6I CCWGG 1 cut(s) 649
PspGI CCWGG 1 cut(s) 649
PspN4I GGNNCC 3 cut(s) 160, 358, 1118
PspPI GGNCC 2 cut(s) 158, 495
RsaI GTAC 2 cut(s) 865, 961
RsaNI GTAC 2 cut(s) 864, 960
RseI CAYNNNNRTG 3 cut(s) 428, 762, 1181
SacI GAGCTC 1 cut(s) 336
SaqAI TTAA 3 cut(s) 477, 818, 990
SatI GCNGC 1 cut(s) 1473
Sau3AI GATC 8 cut(s) 28, 340, 400, 481, 604, 787, 943, 1358
Sau96I GGNCC 2 cut(s) 158, 495
SchI GAGTC 1 cut(s) 1447
ScrFI CCNGG 2 cut(s) 509, 651
SduI GDGCHC 4 cut(s) 111, 336, 376, 894
SfaNI GCATC 3 cut(s) 96, 745, 754
SfuI TTCGAA 1 cut(s) 996
SinI GGWCC 1 cut(s) 158
SmiMI CAYNNNNRTG 3 cut(s) 428, 762, 1181
SmlI CTYRAG 3 cut(s) 740, 1067, 1388
SmoI CTYRAG 3 cut(s) 740, 1067, 1388
Sse9I AATT 9 cut(s) 276, 379, 954, 992, 1128, 1217, 1239, 1400, 1419
SsiI CCGC 6 cut(s) 58, 376, 963, 969, 1304, 1472
SspMI CTAG 3 cut(s) 455, 563, 638
SstI GAGCTC 1 cut(s) 336
StyD4I CCNGG 2 cut(s) 507, 649
StyI CCWWGG 2 cut(s) 578, 1412
TaaI ACNGT 7 cut(s) 37, 200, 446, 465, 527, 620, 975
TaiI ACGT 4 cut(s) 108, 147, 1089, 1169
TaqI TCGA 6 cut(s) 51, 175, 996, 1005, 1030, 1361
TasI AATT 9 cut(s) 276, 379, 954, 992, 1128, 1217, 1239, 1400, 1419
TauI GCSGC 1 cut(s) 1475
TfiI GAWTC 5 cut(s) 568, 1032, 1063, 1072, 1489
Tru1I TTAA 3 cut(s) 477, 818, 990
Tru9I TTAA 3 cut(s) 477, 818, 990
TscAI CASTG 4 cut(s) 711, 901, 978, 1499
TspDTI ATGAA 7 cut(s) 288, 305, 366, 412, 524, 948, 1275
TspRI CASTG 4 cut(s) 711, 901, 978, 1499
Van91I CCANNNNNTGG 1 cut(s) 244
VneI GTGCAC 1 cut(s) 890
VpaK11BI GGWCC 1 cut(s) 158
XapI RAATTY 5 cut(s) 276, 954, 992, 1400, 1419
XcmI CCANNNNNNNNNTGG 1 cut(s) 623
XspI CTAG 3 cut(s) 455, 563, 638
Zsp2I ATGCAT 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.