Rroxscaffold_5G00336250

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000417
Physical Location & Seq
Reverse (-)
4017771 .. 4019267
1497 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00336250.1

Sequence Viewer

Length: 1497 bp
ATGTCTGCAAATTATAAGGGTGCTAAAGATCATACAGTTATCGATGTTGGCAAGAAATGCAAGAAAAGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACCCAGAAGCATATACACCTAACGTTGTTTCAATGGGACCTTTCCATCATTACCGAGAAAAGCAAGGCAAGGAGGAAGGTAAAGGAGGCAAGGGAGGCAACGAAGGCAAAGGCGAGGAAGATTTCCAACTGACGGAACGAGTGAAGAAGAGCTATTTGAATGAAATTCTCACGGGTATGAAGATTACTTTGGAAGAGTTGACCGCAAAAGTTACTGAGCTCTCAGATCAGAAAAATGAAGGTGGCTTTGAGGAACGAGCCCGCAATTTTTATGCAGAACCACTTGATCATATTTCTTCCAAAGACTTCATCGAGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTGATGATCCGAAACTTAGGGCCTTTGATGACCCGGTGTTCAACATGGATTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACAGTTTGTATGGCCTTACCCTTGATATATACCCTGGTGAAGCTTCCCGTGATGTGTACTCTGGTGAAGCTTCCCTCTCTATTCTAATCCTGAAAGCGCTTAGCATACTACCATCACTGAAGCACAGTTGCTCAACCTATAAAACGCATCTCCATGAAAACGAGTGTCATTGTGATGCTGATGTTCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTAATTCCATTAACTAACATAAAAGAGACAGGGCATAAAGCAGCTGGTAAAGAAGGTACATCCAACCCTCAAGAACATCAAGTGCACACTGGGAACAGAGACAAGAGAGACAATAAAGCTGTTCAGAAAGACCCAGATCAACATCAAATTCATACCGCAGCCGCTCTCTCAAAGGCAAACATTAAATTCAAAAGCATCGAAAAGGATAGCATAATGGACATCCAATTCAAAGAGGGTGGGTGGTTCAGGAATGGGATTCTTGAGATTCCAAAGCTAAACGTTGGAATGTCATCAGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATGGTTATTCAAATGAGATAACGTCTTATGCCATCTTTATGGATAACCTCATATCTTCAAAGGAAGATATGGAATTGCTTTGCAAGGAAAAAGTAATTGGTAACTGGATGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAACCTTTACAAGGACATCCCGCACAATAAGTTCTACTATGTTGAGCTGTGCGAAAAAGTGAATGATCGTTACAGGTCGAGATGGCATACATGGTTGGCTTTACTCAAGAGTGAAAAATTTTCTAATCCCTGGAGAATTTTAGCTTTCGGGATTGGTATCTTCATTTTGATTCTCACTGCGTGCAGTCAGACACTCAACATTCGGGTTAACATGCATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

498

Amino Acids

57.04

Weight (kDa)

6.61

Isoelectric Point (pI)

45.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 24 - 483 3.5e-100 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 15
AccBSI CCGCTC 1 cut(s) 962
AccIII TCCGGA 1 cut(s) 93
AciI CCGC 5 cut(s) 306, 364, 954, 960, 1295
AclI AACGTT 2 cut(s) 126, 1077
AclWI GGATC 1 cut(s) 464
AcsI RAATTY 5 cut(s) 267, 945, 983, 1391, 1410
AcuI CTGAAG 3 cut(s) 58, 719, 1255
AdeI CACNNNGTG 1 cut(s) 1455
AfaI GTAC 2 cut(s) 638, 856
AfeI AGCGCT 1 cut(s) 678
AfiI CCNNNNNNNGG 2 cut(s) 235, 1285
AgsI TTSAA 8 cut(s) 135, 262, 449, 505, 988, 1027, 1146, 1194
AjnI CCWGG 2 cut(s) 613, 1403
AjuI GAANNNNNNNTTGG 4 cut(s) 275, 307, 1215, 1247
Alw21I GWGCWC 3 cut(s) 93, 324, 885
Alw26I GTCTC 4 cut(s) 91, 818, 891, 900
Alw44I GTGCAC 1 cut(s) 881
AlwI GGATC 1 cut(s) 464
Aor13HI TCCGGA 1 cut(s) 93
Aor51HI AGCGCT 1 cut(s) 678
AoxI GGCC 2 cut(s) 483, 592
ApaLI GTGCAC 1 cut(s) 881
ApeKI GCWGC 2 cut(s) 839, 956
ApoI RAATTY 5 cut(s) 267, 945, 983, 1391, 1410
AspLEI GCGC 1 cut(s) 679
AspS9I GGNCC 2 cut(s) 140, 483
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 2 cut(s) 629, 656
AvaII GGWCC 1 cut(s) 140
BaeGI GKGCMC 1 cut(s) 885
BanII GRGCYC 2 cut(s) 324, 364
Bbv12I GWGCWC 3 cut(s) 93, 324, 885
BbvI GCAGC 2 cut(s) 851, 968
BccI CCATC 5 cut(s) 156, 700, 1175, 1250, 1350
BciT130I CCWGG 2 cut(s) 615, 1405
BclI TGATCA 1 cut(s) 388
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 4 cut(s) 91, 818, 891, 900
BfaI CTAG 1 cut(s) 551
BfoI RGCGCY 1 cut(s) 680
BisI GCNGC 3 cut(s) 840, 957, 960
BlpI GCTNAGC 1 cut(s) 680
BlsI GCNGC 3 cut(s) 841, 958, 961
Bme1390I CCNGG 3 cut(s) 497, 615, 1405
Bme18I GGWCC 1 cut(s) 140
BmgT120I GGNCC 2 cut(s) 140, 483
BmiI GGNNCC 2 cut(s) 141, 1109
BmrFI CCNGG 3 cut(s) 497, 615, 1405
BmrI ACTGGG 1 cut(s) 897
BmsI GCATC 4 cut(s) 78, 736, 745, 1002
BmuI ACTGGG 1 cut(s) 897
BpmI CTGGAG 1 cut(s) 1426
Bpu1102I GCTNAGC 1 cut(s) 680
BpuEI CTTGAG 3 cut(s) 852, 1079, 1364
BpuMI CCSGG 1 cut(s) 497
Bsa29I ATCGAT 1 cut(s) 42
BsaBI GATNNNNATC 2 cut(s) 939, 1430
BsaJI CCNNGG 4 cut(s) 566, 613, 1135, 1403
BsaWI WCCGGW 1 cut(s) 93
Bsc4I CCNNNNNNNGG 2 cut(s) 235, 1285
Bse1I ACTGG 2 cut(s) 892, 1244
Bse3DI GCAATG 2 cut(s) 1113, 1133
Bse8I GATNNNNATC 2 cut(s) 939, 1430
BseAI TCCGGA 1 cut(s) 93
BseBI CCWGG 2 cut(s) 615, 1405
BseCI ATCGAT 1 cut(s) 42
BseDI CCNNGG 4 cut(s) 566, 613, 1135, 1403
BseGI GGATG 4 cut(s) 857, 1017, 1248, 1290
BseJI GATNNNNATC 2 cut(s) 939, 1430
BseLI CCNNNNNNNGG 2 cut(s) 235, 1285
BseMI GCAATG 2 cut(s) 1113, 1133
BseMII CTCAG 2 cut(s) 309, 339
BseNI ACTGG 2 cut(s) 892, 1244
BseSI GKGCMC 1 cut(s) 885
BseXI GCAGC 2 cut(s) 851, 968
BsgI GTGCAG 2 cut(s) 752, 1477
BshFI GGCC 2 cut(s) 485, 594
BshVI ATCGAT 1 cut(s) 42
BsiHKAI GWGCWC 3 cut(s) 93, 324, 885
BsiSI CCGG 2 cut(s) 94, 497
BslFI GGGAC 1 cut(s) 153
BslI CCNNNNNNNGG 2 cut(s) 235, 1285
BsmAI GTCTC 4 cut(s) 91, 818, 891, 900
BsmFI GGGAC 1 cut(s) 153
BsnI GGCC 2 cut(s) 485, 594
Bsp1286I GDGCHC 4 cut(s) 93, 324, 364, 885
Bsp13I TCCGGA 1 cut(s) 93
Bsp143I GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
Bsp1720I GCTNAGC 1 cut(s) 680
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 5 cut(s) 306, 364, 954, 960, 1295
BspANI GGCC 2 cut(s) 485, 594
BspCNI CTCAG 2 cut(s) 310, 338
BspDI ATCGAT 1 cut(s) 42
BspEI TCCGGA 1 cut(s) 93
BspLI GGNNCC 2 cut(s) 141, 1109
BspPI GGATC 1 cut(s) 464
BspQI GCTCTTC 1 cut(s) 245
BsrBI CCGCTC 1 cut(s) 962
BsrDI GCAATG 2 cut(s) 1113, 1133
BsrI ACTGG 2 cut(s) 892, 1244
BssECI CCNNGG 4 cut(s) 566, 613, 1135, 1403
BssMI GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
BssT1I CCWWGG 2 cut(s) 566, 1135
Bst2UI CCWGG 2 cut(s) 615, 1405
Bst4CI ACNGT 5 cut(s) 37, 434, 453, 584, 707
Bst6I CTCTTC 2 cut(s) 245, 291
BstAPI GCANNNNNTGC 1 cut(s) 57
BstC8I GCNNGC 2 cut(s) 364, 1456
BstDEI CTNAG 4 cut(s) 318, 325, 479, 680
BstDSI CCRYGG 1 cut(s) 1135
BstENI CCTNNNNNAGG 1 cut(s) 1283
BstF5I GGATG 4 cut(s) 857, 1017, 1248, 1290
BstH2I RGCGCY 1 cut(s) 680
BstHHI GCGC 1 cut(s) 679
BstKTI GATC 7 cut(s) 31, 331, 391, 472, 781, 937, 1342
BstMAI GTCTC 4 cut(s) 91, 818, 891, 900
BstMBI GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
BstMWI GCNNNNNNNGC 4 cut(s) 57, 66, 198, 207
BstNI CCWGG 2 cut(s) 615, 1405
BstNSI RCATGY 1 cut(s) 1489
BstSCI CCNGG 3 cut(s) 495, 613, 1403
BstSLI GKGCMC 1 cut(s) 885
BstV1I GCAGC 2 cut(s) 851, 968
BstXI CCANNNNNNTGG 1 cut(s) 1174
Bsu15I ATCGAT 1 cut(s) 42
BsuRI GGCC 2 cut(s) 485, 594
BsuTUI ATCGAT 1 cut(s) 42
BtgI CCRYGG 1 cut(s) 1135
BtsCI GGATG 4 cut(s) 857, 1017, 1248, 1290
BtsI GCAGTG 1 cut(s) 1449
BtsIMutI CAGTG 3 cut(s) 695, 885, 1449
Cac8I GCNNGC 2 cut(s) 364, 1456
CfoI GCGC 1 cut(s) 679
Cfr13I GGNCC 2 cut(s) 140, 483
ClaI ATCGAT 1 cut(s) 42
Csp6I GTAC 2 cut(s) 637, 855
CspCI CAANNNNNGTGG 2 cut(s) 1015, 1050
CviAII CATG 6 cut(s) 508, 536, 734, 1136, 1365, 1486
CviQI GTAC 2 cut(s) 637, 855
DdeI CTNAG 4 cut(s) 318, 325, 479, 680
DpnI GATC 7 cut(s) 30, 330, 390, 471, 780, 936, 1341
DpnII GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
DraIII CACNNNGTG 1 cut(s) 1455
Eam1104I CTCTTC 2 cut(s) 245, 291
EarI CTCTTC 2 cut(s) 245, 291
Ecl136II GAGCTC 1 cut(s) 322
Eco130I CCWWGG 2 cut(s) 566, 1135
Eco24I GRGCYC 2 cut(s) 324, 364
Eco47I GGWCC 1 cut(s) 140
Eco47III AGCGCT 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 322
Eco57I CTGAAG 3 cut(s) 58, 719, 1255
EcoICRI GAGCTC 1 cut(s) 322
EcoNI CCTNNNNNAGG 1 cut(s) 1283
EcoO109I RGGNCCY 2 cut(s) 140, 483
EcoRII CCWGG 2 cut(s) 613, 1403
EcoT14I CCWWGG 2 cut(s) 566, 1135
EcoT22I ATGCAT 1 cut(s) 1491
EcoT38I GRGCYC 2 cut(s) 324, 364
ErhI CCWWGG 2 cut(s) 566, 1135
FaeI CATG 6 cut(s) 511, 539, 737, 1139, 1368, 1489
FaqI GGGAC 1 cut(s) 153
FatI CATG 6 cut(s) 507, 535, 733, 1135, 1364, 1485
FauI CCCGC 2 cut(s) 371, 1302
FbaI TGATCA 1 cut(s) 388
Fnu4HI GCNGC 3 cut(s) 840, 957, 960
FokI GGATG 4 cut(s) 844, 1004, 1255, 1277
FriOI GRGCYC 2 cut(s) 324, 364
Fsp4HI GCNGC 3 cut(s) 840, 957, 960
FspBI CTAG 1 cut(s) 551
GlaI GCGC 1 cut(s) 678
GluI GCNGC 3 cut(s) 840, 957, 960
GsuI CTGGAG 1 cut(s) 1426
HaeII RGCGCY 1 cut(s) 680
HaeIII GGCC 2 cut(s) 485, 594
HapII CCGG 2 cut(s) 94, 497
HhaI GCGC 1 cut(s) 679
Hin1II CATG 6 cut(s) 511, 539, 737, 1139, 1368, 1489
Hin6I GCGC 1 cut(s) 677
HinP1I GCGC 1 cut(s) 677
HincII GTYRAC 3 cut(s) 303, 430, 1483
HindII GTYRAC 3 cut(s) 303, 430, 1483
HindIII AAGCTT 2 cut(s) 621, 648
HinfI GANTC 4 cut(s) 556, 1054, 1063, 1444
HpaI GTTAAC 1 cut(s) 1483
HpaII CCGG 2 cut(s) 94, 497
HphI GGTGA 2 cut(s) 629, 656
Hpy166II GTNNAC 5 cut(s) 303, 430, 637, 883, 1483
Hpy188I TCNGA 8 cut(s) 77, 328, 333, 459, 474, 924, 1093, 1464
Hpy8I GTNNAC 5 cut(s) 303, 430, 637, 883, 1483
HpyAV CCTTC 4 cut(s) 173, 200, 335, 845
HpyCH4III ACNGT 5 cut(s) 37, 434, 453, 584, 707
HpyCH4IV ACGT 4 cut(s) 87, 126, 1077, 1157
HpyCH4V TGCA 9 cut(s) 8, 60, 377, 769, 883, 1118, 1218, 1458, 1489
HpyF10VI GCNNNNNNNGC 4 cut(s) 57, 66, 198, 207
HpyF3I CTNAG 4 cut(s) 318, 325, 479, 680
HpySE526I ACGT 4 cut(s) 87, 126, 1077, 1157
Hsp92II CATG 6 cut(s) 511, 539, 737, 1139, 1368, 1489
HspAI GCGC 1 cut(s) 677
Kpn2I TCCGGA 1 cut(s) 93
Ksp22I TGATCA 1 cut(s) 388
KspAI GTTAAC 1 cut(s) 1483
Kzo9I GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 2 cut(s) 96, 552
Lsp1109I GCAGC 2 cut(s) 851, 968
LweI GCATC 4 cut(s) 78, 736, 745, 1002
MaeI CTAG 1 cut(s) 551
MaeII ACGT 4 cut(s) 87, 126, 1077, 1157
MaeIII GTNAC 3 cut(s) 313, 1235, 1343
MalI GATC 7 cut(s) 30, 330, 390, 471, 780, 936, 1341
MbiI CCGCTC 1 cut(s) 962
MboI GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
MfeI CAATTG 1 cut(s) 1119
MhlI GDGCHC 4 cut(s) 93, 324, 364, 885
MmeI TCCRAC 3 cut(s) 253, 885, 1060
Mph1103I ATGCAT 1 cut(s) 1491
MroI TCCGGA 1 cut(s) 93
MseI TTAA 3 cut(s) 809, 981, 1482
MslI CAYNNNNRTG 5 cut(s) 278, 416, 732, 753, 1172
MspA1I CMGCKG 1 cut(s) 842
MspI CCGG 2 cut(s) 94, 497
MspR9I CCNGG 3 cut(s) 497, 615, 1405
MunI CAATTG 1 cut(s) 1119
MvaI CCWGG 2 cut(s) 615, 1405
MwoI GCNNNNNNNGC 4 cut(s) 57, 66, 198, 207
NciI CCSGG 1 cut(s) 497
NcoI CCATGG 1 cut(s) 1135
NdeII GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
NlaIII CATG 6 cut(s) 511, 539, 737, 1139, 1368, 1489
NlaIV GGNNCC 2 cut(s) 141, 1109
NsiI ATGCAT 1 cut(s) 1491
NspI RCATGY 1 cut(s) 1489
PciSI GCTCTTC 1 cut(s) 245
PfeI GAWTC 4 cut(s) 556, 1054, 1063, 1444
PkrI GCNGC 3 cut(s) 841, 958, 961
PpuMI RGGWCCY 1 cut(s) 140
PsiI TTATAA 1 cut(s) 15
Psp124BI GAGCTC 1 cut(s) 324
Psp1406I AACGTT 2 cut(s) 126, 1077
Psp5II RGGWCCY 1 cut(s) 140
Psp6I CCWGG 2 cut(s) 613, 1403
PspGI CCWGG 2 cut(s) 613, 1403
PspN4I GGNNCC 2 cut(s) 141, 1109
PspPI GGNCC 2 cut(s) 140, 483
PspPPI RGGWCCY 1 cut(s) 140
PvuII CAGCTG 1 cut(s) 842
RsaI GTAC 2 cut(s) 638, 856
RsaNI GTAC 2 cut(s) 637, 855
RseI CAYNNNNRTG 5 cut(s) 278, 416, 732, 753, 1172
SacI GAGCTC 1 cut(s) 324
SapI GCTCTTC 1 cut(s) 245
SaqAI TTAA 3 cut(s) 809, 981, 1482
SatI GCNGC 3 cut(s) 840, 957, 960
Sau3AI GATC 7 cut(s) 28, 328, 388, 469, 778, 934, 1339
Sau96I GGNCC 2 cut(s) 140, 483
ScrFI CCNGG 3 cut(s) 497, 615, 1405
SduI GDGCHC 4 cut(s) 93, 324, 364, 885
SfaNI GCATC 4 cut(s) 78, 736, 745, 1002
SinI GGWCC 1 cut(s) 140
SmiMI CAYNNNNRTG 5 cut(s) 278, 416, 732, 753, 1172
SmlI CTYRAG 3 cut(s) 867, 1058, 1379
SmoI CTYRAG 3 cut(s) 867, 1058, 1379
SsiI CCGC 5 cut(s) 306, 364, 954, 960, 1295
SspMI CTAG 1 cut(s) 551
SstI GAGCTC 1 cut(s) 324
StyD4I CCNGG 3 cut(s) 495, 613, 1403
StyI CCWWGG 2 cut(s) 566, 1135
TaaI ACNGT 5 cut(s) 37, 434, 453, 584, 707
TaiI ACGT 4 cut(s) 90, 129, 1080, 1160
TaqI TCGA 4 cut(s) 42, 414, 996, 1352
TatI WGTACW 1 cut(s) 636
TauI GCSGC 1 cut(s) 962
TfiI GAWTC 4 cut(s) 556, 1054, 1063, 1444
Tru1I TTAA 3 cut(s) 809, 981, 1482
Tru9I TTAA 3 cut(s) 809, 981, 1482
TscAI CASTG 3 cut(s) 702, 892, 1456
TseI GCWGC 2 cut(s) 839, 956
TspDTI ATGAA 9 cut(s) 279, 296, 354, 400, 512, 750, 938, 1266, 1426
TspGWI ACGGA 1 cut(s) 251
TspRI CASTG 3 cut(s) 702, 892, 1456
VneI GTGCAC 1 cut(s) 881
VpaK11BI GGWCC 1 cut(s) 140
XagI CCTNNNNNAGG 1 cut(s) 1283
XapI RAATTY 5 cut(s) 267, 945, 983, 1391, 1410
XceI RCATGY 1 cut(s) 1489
XcmI CCANNNNNNNNNTGG 1 cut(s) 587
XspI CTAG 1 cut(s) 551
Zsp2I ATGCAT 1 cut(s) 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.