UPF0481 protein At3g47200-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 615 |
| AarI | CACCTGC | 1 cut(s) | 1192 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 215 |
| Acc36I | ACCTGC | 2 cut(s) | 188, 1192 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 253, 1275 |
| AccI | GTMKAC | 1 cut(s) | 1232 |
| AccII | CGCG | 1 cut(s) | 385 |
| AccIII | TCCGGA | 1 cut(s) | 111 |
| AciI | CCGC | 9 cut(s) | 58, 327, 366, 628, 840, 846, 938, 1166, 1228 |
| AclI | AACGTT | 1 cut(s) | 948 |
| AcsI | RAATTY | 6 cut(s) | 285, 831, 869, 1175, 1262, 1281 |
| AcuI | CTGAAG | 5 cut(s) | 76, 444, 614, 768, 1126 |
| AfaI | GTAC | 1 cut(s) | 838 |
| AfeI | AGCGCT | 1 cut(s) | 573 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 253, 1156, 1275 |
| AflII | CTTAAG | 1 cut(s) | 929 |
| AgsI | TTSAA | 4 cut(s) | 316, 362, 470, 914 |
| AjnI | CCWGG | 1 cut(s) | 1274 |
| AleI | CACNNNNGTG | 2 cut(s) | 18, 1202 |
| AluBI | AGCT | 5 cut(s) | 273, 343, 545, 686, 943 |
| AluI | AGCT | 5 cut(s) | 273, 343, 545, 686, 943 |
| Alw21I | GWGCWC | 1 cut(s) | 1192 |
| Alw26I | GTCTC | 2 cut(s) | 109, 780 |
| Aor13HI | TCCGGA | 1 cut(s) | 111 |
| Aor51HI | AGCGCT | 1 cut(s) | 573 |
| ApeKI | GCWGC | 2 cut(s) | 5, 940 |
| ApoI | RAATTY | 6 cut(s) | 285, 831, 869, 1175, 1262, 1281 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 893, 925 |
| AspLEI | GCGC | 2 cut(s) | 574, 727 |
| AspS9I | GGNCC | 1 cut(s) | 158 |
| AsuHPI | GGTGA | 1 cut(s) | 1216 |
| AvaII | GGWCC | 1 cut(s) | 158 |
| AxyI | CCTNAGG | 1 cut(s) | 102 |
| BbsI | GAAGAC | 2 cut(s) | 213, 432 |
| Bbv12I | GWGCWC | 1 cut(s) | 1192 |
| BbvI | GCAGC | 1 cut(s) | 952 |
| BccI | CCATC | 4 cut(s) | 595, 1039, 1046, 1121 |
| BciT130I | CCWGG | 1 cut(s) | 1276 |
| BcoDI | GTCTC | 2 cut(s) | 109, 780 |
| BfoI | RGCGCY | 1 cut(s) | 575 |
| BfrI | CTTAAG | 1 cut(s) | 929 |
| BfuAI | ACCTGC | 2 cut(s) | 188, 1192 |
| BglII | AGATCT | 1 cut(s) | 820 |
| BisI | GCNGC | 2 cut(s) | 6, 941 |
| BlpI | GCTNAGC | 1 cut(s) | 575 |
| BlsI | GCNGC | 2 cut(s) | 7, 942 |
| Bme1390I | CCNGG | 1 cut(s) | 1276 |
| Bme18I | GGWCC | 1 cut(s) | 158 |
| BmgT120I | GGNCC | 1 cut(s) | 158 |
| BmiI | GGNNCC | 2 cut(s) | 743, 980 |
| BmrFI | CCNGG | 1 cut(s) | 1276 |
| BmrI | ACTGGG | 1 cut(s) | 747 |
| BmsI | GCATC | 3 cut(s) | 96, 570, 649 |
| BmuI | ACTGGG | 1 cut(s) | 747 |
| BpiI | GAAGAC | 2 cut(s) | 213, 432 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 365, 397 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 575 |
| BpuEI | CTTGAG | 1 cut(s) | 1235 |
| BsaBI | GATNNNNATC | 1 cut(s) | 825 |
| BsaJI | CCNNGG | 4 cut(s) | 497, 1006, 1065, 1274 |
| BsaWI | WCCGGW | 1 cut(s) | 111 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 253, 1156, 1275 |
| Bse1I | ACTGG | 2 cut(s) | 742, 1115 |
| Bse21I | CCTNAGG | 1 cut(s) | 102 |
| Bse3DI | GCAATG | 2 cut(s) | 984, 1004 |
| Bse8I | GATNNNNATC | 1 cut(s) | 825 |
| BseAI | TCCGGA | 1 cut(s) | 111 |
| BseBI | CCWGG | 1 cut(s) | 1276 |
| BseDI | CCNNGG | 4 cut(s) | 497, 1006, 1065, 1274 |
| BseGI | GGATG | 4 cut(s) | 903, 1028, 1161, 1344 |
| BseJI | GATNNNNATC | 1 cut(s) | 825 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 253, 1156, 1275 |
| BseMI | GCAATG | 2 cut(s) | 984, 1004 |
| BseMII | CTCAG | 6 cut(s) | 306, 360, 589, 1106, 1214, 1333 |
| BseNI | ACTGG | 2 cut(s) | 742, 1115 |
| BseXI | GCAGC | 1 cut(s) | 952 |
| BsgI | GTGCAG | 2 cut(s) | 647, 1180 |
| Bsh1236I | CGCG | 1 cut(s) | 385 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1192 |
| BsiSI | CCGG | 1 cut(s) | 112 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 253, 1156, 1275 |
| BsmAI | GTCTC | 2 cut(s) | 109, 780 |
| BsmI | GAATGC | 1 cut(s) | 763 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1192 |
| Bsp13I | TCCGGA | 1 cut(s) | 111 |
| Bsp143I | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 575 |
| Bsp19I | CCATGG | 1 cut(s) | 1006 |
| BspACI | CCGC | 9 cut(s) | 58, 327, 366, 628, 840, 846, 938, 1166, 1228 |
| BspCNI | CTCAG | 6 cut(s) | 305, 359, 588, 1107, 1215, 1332 |
| BspEI | TCCGGA | 1 cut(s) | 111 |
| BspFNI | CGCG | 1 cut(s) | 385 |
| BspHI | TCATGA | 1 cut(s) | 564 |
| BspLI | GGNNCC | 2 cut(s) | 743, 980 |
| BspMI | ACCTGC | 2 cut(s) | 188, 1192 |
| BspTI | CTTAAG | 1 cut(s) | 929 |
| BsrDI | GCAATG | 2 cut(s) | 984, 1004 |
| BsrI | ACTGG | 2 cut(s) | 742, 1115 |
| BssECI | CCNNGG | 4 cut(s) | 497, 1006, 1065, 1274 |
| BssMI | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| BssNAI | GTATAC | 1 cut(s) | 1233 |
| BssT1I | CCWWGG | 3 cut(s) | 497, 1006, 1065 |
| Bst1107I | GTATAC | 1 cut(s) | 1233 |
| Bst2UI | CCWGG | 1 cut(s) | 1276 |
| Bst4CI | ACNGT | 2 cut(s) | 455, 474 |
| Bst6I | CTCTTC | 2 cut(s) | 711, 1066 |
| BstAFI | CTTAAG | 1 cut(s) | 929 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 75, 84 |
| BstC8I | GCNNGC | 2 cut(s) | 383, 1199 |
| BstDEI | CTNAG | 7 cut(s) | 102, 292, 346, 575, 1115, 1223, 1319 |
| BstDSI | CCRYGG | 1 cut(s) | 1006 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1154 |
| BstF5I | GGATG | 4 cut(s) | 903, 1028, 1161, 1344 |
| BstFNI | CGCG | 1 cut(s) | 385 |
| BstH2I | RGCGCY | 1 cut(s) | 575 |
| BstHHI | GCGC | 2 cut(s) | 574, 727 |
| BstKTI | GATC | 5 cut(s) | 31, 352, 676, 823, 1213 |
| BstMAI | GTCTC | 2 cut(s) | 109, 780 |
| BstMBI | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 57, 66, 75, 84, 382, 731 |
| BstNI | CCWGG | 1 cut(s) | 1276 |
| BstNSI | RCATGY | 1 cut(s) | 626 |
| BstSCI | CCNGG | 1 cut(s) | 1274 |
| BstUI | CGCG | 1 cut(s) | 385 |
| BstV1I | GCAGC | 1 cut(s) | 952 |
| BstV2I | GAAGAC | 2 cut(s) | 213, 432 |
| BstX2I | RGATCY | 1 cut(s) | 820 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1045 |
| BstYI | RGATCY | 1 cut(s) | 820 |
| BstZ17I | GTATAC | 1 cut(s) | 1233 |
| Bsu36I | CCTNAGG | 1 cut(s) | 102 |
| BtgI | CCRYGG | 1 cut(s) | 1006 |
| BtgZI | GCGATG | 1 cut(s) | 66 |
| BtsCI | GGATG | 4 cut(s) | 903, 1028, 1161, 1344 |
| BtsIMutI | CAGTG | 1 cut(s) | 590 |
| BveI | ACCTGC | 2 cut(s) | 188, 1192 |
| Cac8I | GCNNGC | 2 cut(s) | 383, 1199 |
| CciI | TCATGA | 1 cut(s) | 564 |
| CfoI | GCGC | 2 cut(s) | 574, 727 |
| Cfr13I | GGNCC | 1 cut(s) | 158 |
| Csp6I | GTAC | 1 cut(s) | 837 |
| CviAII | CATG | 7 cut(s) | 253, 565, 623, 755, 803, 1007, 1236 |
| CviJI | RGCY | 9 cut(s) | 5, 273, 343, 545, 686, 943, 1114, 1244, 1289 |
| CviKI_1 | RGCY | 9 cut(s) | 5, 273, 343, 545, 686, 943, 1114, 1244, 1289 |
| CviQI | GTAC | 1 cut(s) | 837 |
| DdeI | CTNAG | 7 cut(s) | 102, 292, 346, 575, 1115, 1223, 1319 |
| DpnI | GATC | 5 cut(s) | 30, 351, 675, 822, 1212 |
| DpnII | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 215 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 215 |
| Eam1104I | CTCTTC | 2 cut(s) | 711, 1066 |
| EarI | CTCTTC | 2 cut(s) | 711, 1066 |
| EciI | GGCGGA | 1 cut(s) | 617 |
| Eco130I | CCWWGG | 3 cut(s) | 497, 1006, 1065 |
| Eco47I | GGWCC | 1 cut(s) | 158 |
| Eco47III | AGCGCT | 1 cut(s) | 573 |
| Eco57I | CTGAAG | 5 cut(s) | 76, 444, 614, 768, 1126 |
| Eco81I | CCTNAGG | 1 cut(s) | 102 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1154 |
| EcoRII | CCWGG | 1 cut(s) | 1274 |
| EcoT14I | CCWWGG | 3 cut(s) | 497, 1006, 1065 |
| EcoT22I | ATGCAT | 1 cut(s) | 89 |
| ErhI | CCWWGG | 3 cut(s) | 497, 1006, 1065 |
| FaeI | CATG | 7 cut(s) | 256, 568, 626, 758, 806, 1010, 1239 |
| FatI | CATG | 7 cut(s) | 252, 564, 622, 754, 802, 1006, 1235 |
| FauI | CCCGC | 2 cut(s) | 359, 1173 |
| FauNDI | CATATG | 1 cut(s) | 1325 |
| FblI | GTMKAC | 1 cut(s) | 1232 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 941 |
| FokI | GGATG | 4 cut(s) | 890, 1015, 1148, 1331 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 941 |
| GlaI | GCGC | 2 cut(s) | 573, 726 |
| GluI | GCNGC | 2 cut(s) | 6, 941 |
| HaeII | RGCGCY | 1 cut(s) | 575 |
| HapII | CCGG | 1 cut(s) | 112 |
| HhaI | GCGC | 2 cut(s) | 574, 727 |
| Hin1II | CATG | 7 cut(s) | 256, 568, 626, 758, 806, 1010, 1239 |
| Hin6I | GCGC | 2 cut(s) | 572, 725 |
| HinP1I | GCGC | 2 cut(s) | 572, 725 |
| HincII | GTYRAC | 2 cut(s) | 324, 451 |
| HindII | GTYRAC | 2 cut(s) | 324, 451 |
| HindIII | AAGCTT | 1 cut(s) | 543 |
| HinfI | GANTC | 4 cut(s) | 487, 925, 934, 1330 |
| HpaII | CCGG | 1 cut(s) | 112 |
| HphI | GGTGA | 1 cut(s) | 1216 |
| Hpy166II | GTNNAC | 3 cut(s) | 324, 451, 1233 |
| Hpy188III | TCNNGA | 7 cut(s) | 112, 436, 565, 976, 1042, 1252, 1294 |
| Hpy8I | GTNNAC | 3 cut(s) | 324, 451, 1233 |
| HpyAV | CCTTC | 2 cut(s) | 218, 356 |
| HpyCH4III | ACNGT | 2 cut(s) | 455, 474 |
| HpyCH4IV | ACGT | 1 cut(s) | 948 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 57, 66, 75, 84, 382, 731 |
| HpyF3I | CTNAG | 7 cut(s) | 102, 292, 346, 575, 1115, 1223, 1319 |
| HpySE526I | ACGT | 1 cut(s) | 948 |
| Hsp92II | CATG | 7 cut(s) | 256, 568, 626, 758, 806, 1010, 1239 |
| HspAI | GCGC | 2 cut(s) | 572, 725 |
| Kpn2I | TCCGGA | 1 cut(s) | 111 |
| Kzo9I | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| Lsp1109I | GCAGC | 1 cut(s) | 952 |
| LweI | GCATC | 3 cut(s) | 96, 570, 649 |
| MaeII | ACGT | 1 cut(s) | 948 |
| MaeIII | GTNAC | 3 cut(s) | 1106, 1214, 1256 |
| MalI | GATC | 5 cut(s) | 30, 351, 675, 822, 1212 |
| MboI | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| MflI | RGATCY | 1 cut(s) | 820 |
| MhlI | GDGCHC | 1 cut(s) | 1192 |
| MlyI | GAGTC | 1 cut(s) | 1339 |
| MmeI | TCCRAC | 4 cut(s) | 271, 898, 931, 1293 |
| MnlI | CCTC | 8 cut(s) | 167, 176, 184, 229, 430, 560, 992, 1218 |
| Mph1103I | ATGCAT | 1 cut(s) | 89 |
| MroI | TCCGGA | 1 cut(s) | 111 |
| MseI | TTAA | 4 cut(s) | 339, 704, 867, 930 |
| MslI | CAYNNNNRTG | 5 cut(s) | 18, 437, 648, 1043, 1202 |
| MspCI | CTTAAG | 1 cut(s) | 929 |
| MspI | CCGG | 1 cut(s) | 112 |
| MspR9I | CCNGG | 1 cut(s) | 1276 |
| Mva1269I | GAATGC | 1 cut(s) | 763 |
| MvaI | CCWGG | 1 cut(s) | 1276 |
| MvnI | CGCG | 1 cut(s) | 385 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 57, 66, 75, 84, 382, 731 |
| NcoI | CCATGG | 1 cut(s) | 1006 |
| NdeI | CATATG | 1 cut(s) | 1325 |
| NdeII | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| NlaIII | CATG | 7 cut(s) | 256, 568, 626, 758, 806, 1010, 1239 |
| NlaIV | GGNNCC | 2 cut(s) | 743, 980 |
| NmuCI | GTSAC | 1 cut(s) | 1256 |
| NsiI | ATGCAT | 1 cut(s) | 89 |
| NspI | RCATGY | 1 cut(s) | 626 |
| OliI | CACNNNNGTG | 2 cut(s) | 18, 1202 |
| PagI | TCATGA | 1 cut(s) | 564 |
| PaqCI | CACCTGC | 1 cut(s) | 1192 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 178 |
| PctI | GAATGC | 1 cut(s) | 763 |
| PfeI | GAWTC | 3 cut(s) | 487, 925, 934 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 253, 1275 |
| PkrI | GCNGC | 2 cut(s) | 7, 942 |
| PleI | GAGTC | 1 cut(s) | 1338 |
| PpsI | GAGTC | 1 cut(s) | 1338 |
| PsiI | TTATAA | 1 cut(s) | 615 |
| Psp1406I | AACGTT | 1 cut(s) | 948 |
| Psp6I | CCWGG | 1 cut(s) | 1274 |
| PspGI | CCWGG | 1 cut(s) | 1274 |
| PspN4I | GGNNCC | 2 cut(s) | 743, 980 |
| PspPI | GGNCC | 1 cut(s) | 158 |
| PsuI | RGATCY | 1 cut(s) | 820 |
| RsaI | GTAC | 1 cut(s) | 838 |
| RsaNI | GTAC | 1 cut(s) | 837 |
| RseI | CAYNNNNRTG | 5 cut(s) | 18, 437, 648, 1043, 1202 |
| SaqAI | TTAA | 4 cut(s) | 339, 704, 867, 930 |
| SatI | GCNGC | 2 cut(s) | 6, 941 |
| Sau3AI | GATC | 5 cut(s) | 28, 349, 673, 820, 1210 |
| Sau96I | GGNCC | 1 cut(s) | 158 |
| SchI | GAGTC | 1 cut(s) | 1339 |
| ScrFI | CCNGG | 1 cut(s) | 1276 |
| SduI | GDGCHC | 1 cut(s) | 1192 |
| SfaNI | GCATC | 3 cut(s) | 96, 570, 649 |
| SinI | GGWCC | 1 cut(s) | 158 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 18, 437, 648, 1043, 1202 |
| SmlI | CTYRAG | 2 cut(s) | 929, 1250 |
| SmoI | CTYRAG | 2 cut(s) | 929, 1250 |
| SsiI | CCGC | 9 cut(s) | 58, 327, 366, 628, 840, 846, 938, 1166, 1228 |
| StyD4I | CCNGG | 1 cut(s) | 1274 |
| StyI | CCWWGG | 3 cut(s) | 497, 1006, 1065 |
| TaaI | ACNGT | 2 cut(s) | 455, 474 |
| TaiI | ACGT | 1 cut(s) | 951 |
| TaqI | TCGA | 3 cut(s) | 172, 435, 993 |
| TfiI | GAWTC | 3 cut(s) | 487, 925, 934 |
| Tru1I | TTAA | 4 cut(s) | 339, 704, 867, 930 |
| Tru9I | TTAA | 4 cut(s) | 339, 704, 867, 930 |
| TscAI | CASTG | 1 cut(s) | 597 |
| TseFI | GTSAC | 1 cut(s) | 1256 |
| TseI | GCWGC | 2 cut(s) | 5, 940 |
| Tsp45I | GTSAC | 1 cut(s) | 1256 |
| TspDTI | ATGAA | 9 cut(s) | 155, 314, 421, 555, 581, 771, 791, 1035, 1137 |
| TspRI | CASTG | 1 cut(s) | 597 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 253, 1275 |
| Vha464I | CTTAAG | 1 cut(s) | 929 |
| VpaK11BI | GGWCC | 1 cut(s) | 158 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1154 |
| XapI | RAATTY | 6 cut(s) | 285, 831, 869, 1175, 1262, 1281 |
| XceI | RCATGY | 1 cut(s) | 626 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1072 |
| XmiI | GTMKAC | 1 cut(s) | 1232 |
| Zsp2I | ATGCAT | 1 cut(s) | 89 |