Rroxscaffold_5G00336670

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000417
Physical Location & Seq
Forward (+)
4493379 .. 4494854
1476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00336670.1

Sequence Viewer

Length: 1476 bp
ATGTCCGCAGATCATAGAAGTGCACGTGGTAGAGATCATACAGTAATCGATATTCTCGATGACAGCGAGAAAAGCACGAATTGCATCTTCAGAGTTCCTAACGTGCTCTGGAGACAAAATCCAGAAGCACATACACCTGACGTTGTTTCAATCGGACCTTTTCATCATTATCCAGAAAAGCGAGGCAAGGAGGAAGGTAAAAGAGGCAAAGACGGCAATGGCGAAAAATATTTCCAACTCATGGAACGAGTGAAAACTCGCTATTTGAATGAAATTCTCACAGTCACGAAGAATATGACTTTGGAAAAGTTGACTACAGAAGTCATTAAGCGCTCAGATCAAAAGAATGAAGGCGAATTTGAGCAAAACGCGCGCGATTTTTATGCAGAACCACTTGATCATATTTCCTCTGAAGACTTCATGGGGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTGACGATCCGAAACTCAGGGCCTTATATGACCCGGTGTTCAACATGGACTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAAAATCAACTACCTTGGTTTGTTATCCACAGTTTGTATAGCCTTATCATTGAAATATACCCTGATCAACCCTCCCTCTCTTTTCTCGTCCTTGAAGCCTTCAGCATGGTACCATCACTGAAGCAAAGTTGCTCATCTTATAATAACCATCTCCGCATAAACAAGTGTCGTTGTGATGCTGATTATCTGCACATACTTGATCTGGTAAGAAATTCCATAGTAATTCCATCAGGGACCAAAGCAGCTGGAAAAGAATCTATGTCCAACCCTGGAGAACATGAAGTTGGCTCTGGGAACAAACACAAGGGAAACAATAAAGTTGTTCATGACCCAGATCTACATCAAATTCGTACCGCAACCGAACTCTCAAAGTCAGACATTAAATTCAAAATGGCCAAAAAGGAGAGCAATCAGAGGATTCAGAGCATAATGGACATCCGATTTAAAAAGGGTGGGTGGTTCAGGAATGGGATTCTAGAGATTCCACAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATGGTTATTCAAACGAGATAACATCGTATGCTATCTTTATGGATAACCTCATCTCTTCAAAGGAAGATATGGAATTACTTTGCAAGAAAAAAGTAATAGGTAACTTGATGAGTGATGAGGATGGCTGCAAGTTTTTCAGCAACCTTTACAAGGACATCCCGCACAACAAGTTCTACTATGTAGAGCTGTGCAAAGAAGTGAATGATCGTTACAATTTGAGATGGTATACTTGGTTGGCTTTACTCAAGTTTGAAAAGTTTTCTAACCCCTGGAAGGTTTTGGCTTTCGTGGTAGCTATTATTGCTTTGACTCTCACCGCGTGGAGTCAGACAAACCTCATTCGGATTAACTGGCATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

491

Amino Acids

57.02

Weight (kDa)

7.0

Isoelectric Point (pI)

44.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 29 - 476 2.7e-97 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
Acc65I GGTACC 1 cut(s) 670
AccB1I GGYRCC 1 cut(s) 670
AccB7I CCANNNNNTGG 1 cut(s) 241
AccI GTMKAC 1 cut(s) 1340
AccII CGCG 4 cut(s) 371, 373, 375, 1433
AciI CCGC 5 cut(s) 6, 715, 915, 1274, 1431
AclI AACGTT 1 cut(s) 1056
AclWI GGATC 1 cut(s) 473
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 5 cut(s) 273, 356, 772, 906, 944
AcuI CTGAAG 4 cut(s) 73, 432, 646, 701
AcvI CACGTG 1 cut(s) 26
AdeI CACNNNGTG 1 cut(s) 1434
AfaI GTAC 2 cut(s) 672, 913
AfeI AGCGCT 1 cut(s) 332
AfiI CCNNNNNNNGG 3 cut(s) 241, 1264, 1387
AjnI CCWGG 2 cut(s) 829, 1382
AjuI GAANNNNNNNTTGG 4 cut(s) 284, 316, 828, 860
AluBI AGCT 4 cut(s) 806, 1051, 1300, 1409
AluI AGCT 4 cut(s) 806, 1051, 1300, 1409
Alw21I GWGCWC 2 cut(s) 25, 108
Alw26I GTCTC 1 cut(s) 106
Alw44I GTGCAC 1 cut(s) 21
AlwI GGATC 1 cut(s) 473
Aor51HI AGCGCT 1 cut(s) 332
AoxI GGCC 2 cut(s) 492, 954
ApaLI GTGCAC 1 cut(s) 21
ApeKI GCWGC 2 cut(s) 803, 1239
ApoI RAATTY 5 cut(s) 273, 356, 772, 906, 944
Asp718I GGTACC 1 cut(s) 670
AspLEI GCGC 3 cut(s) 333, 373, 375
AspS9I GGNCC 3 cut(s) 155, 492, 795
AsuC2I CCSGG 1 cut(s) 506
AsuHPI GGTGA 1 cut(s) 1420
AvaII GGWCC 2 cut(s) 155, 795
BaeGI GKGCMC 1 cut(s) 25
BalI TGGCCA 1 cut(s) 956
BanI GGYRCC 1 cut(s) 670
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 1 cut(s) 420
Bbv12I GWGCWC 2 cut(s) 25, 108
BbvI GCAGC 2 cut(s) 815, 1226
BccI CCATC 5 cut(s) 682, 717, 796, 1229, 1329
BceAI ACGGC 1 cut(s) 229
BcgI CGANNNNNNTGC 2 cut(s) 365, 399
BciT130I CCWGG 2 cut(s) 831, 1384
BclI TGATCA 2 cut(s) 397, 625
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 1 cut(s) 106
BfaI CTAG 2 cut(s) 560, 1037
BfmI CTRYAG 1 cut(s) 315
BfoI RGCGCY 1 cut(s) 334
BglII AGATCT 1 cut(s) 895
BisI GCNGC 2 cut(s) 804, 1240
BlsI GCNGC 2 cut(s) 805, 1241
Bme1390I CCNGG 3 cut(s) 506, 831, 1384
Bme18I GGWCC 2 cut(s) 155, 795
BmgT120I GGNCC 3 cut(s) 155, 492, 795
BmiI GGNNCC 3 cut(s) 672, 796, 1088
BmrFI CCNGG 3 cut(s) 506, 831, 1384
BmsI GCATC 2 cut(s) 93, 727
BpiI GAAGAC 1 cut(s) 420
BpmI CTGGAG 2 cut(s) 130, 852
BpuEI CTTGAG 1 cut(s) 1343
BpuMI CCSGG 1 cut(s) 506
Bsa29I ATCGAT 1 cut(s) 48
BsaAI YACGTR 1 cut(s) 26
BsaBI GATNNNNATC 1 cut(s) 900
BsaJI CCNNGG 4 cut(s) 575, 829, 1114, 1382
Bsc4I CCNNNNNNNGG 3 cut(s) 241, 1264, 1387
Bse1I ACTGG 1 cut(s) 1469
Bse3DI GCAATG 3 cut(s) 223, 1092, 1112
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 2 cut(s) 831, 1384
BseCI ATCGAT 1 cut(s) 48
BseDI CCNNGG 4 cut(s) 575, 829, 1114, 1382
BseGI GGATG 4 cut(s) 432, 996, 1240, 1269
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 3 cut(s) 241, 1264, 1387
BseMI GCAATG 3 cut(s) 223, 1092, 1112
BseMII CTCAG 2 cut(s) 348, 502
BseNI ACTGG 1 cut(s) 1469
BsePI GCGCGC 1 cut(s) 371
BseSI GKGCMC 1 cut(s) 25
BseXI GCAGC 2 cut(s) 815, 1226
BsgI GTGCAG 1 cut(s) 734
Bsh1236I CGCG 4 cut(s) 371, 373, 375, 1433
BshFI GGCC 2 cut(s) 494, 956
BshNI GGYRCC 1 cut(s) 670
BshVI ATCGAT 1 cut(s) 48
BsiHKAI GWGCWC 2 cut(s) 25, 108
BsiSI CCGG 1 cut(s) 506
BslFI GGGAC 1 cut(s) 808
BslI CCNNNNNNNGG 3 cut(s) 241, 1264, 1387
BsmAI GTCTC 1 cut(s) 106
BsmFI GGGAC 1 cut(s) 808
BsnI GGCC 2 cut(s) 494, 956
Bsp1286I GDGCHC 2 cut(s) 25, 108
Bsp143I GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
Bsp19I CCATGG 1 cut(s) 1114
BspACI CCGC 5 cut(s) 6, 715, 915, 1274, 1431
BspANI GGCC 2 cut(s) 494, 956
BspCNI CTCAG 2 cut(s) 347, 501
BspDI ATCGAT 1 cut(s) 48
BspFNI CGCG 4 cut(s) 371, 373, 375, 1433
BspHI TCATGA 1 cut(s) 886
BspLI GGNNCC 3 cut(s) 672, 796, 1088
BspPI GGATC 1 cut(s) 473
BspT107I GGYRCC 1 cut(s) 670
BsrDI GCAATG 3 cut(s) 223, 1092, 1112
BsrI ACTGG 1 cut(s) 1469
BssECI CCNNGG 4 cut(s) 575, 829, 1114, 1382
BssHII GCGCGC 1 cut(s) 371
BssMI GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
BssNAI GTATAC 1 cut(s) 1341
BssT1I CCWWGG 2 cut(s) 575, 1114
Bst1107I GTATAC 1 cut(s) 1341
Bst2UI CCWGG 2 cut(s) 831, 1384
Bst4CI ACNGT 6 cut(s) 43, 283, 443, 462, 524, 593
Bst6I CTCTTC 1 cut(s) 1174
BstAPI GCANNNNNTGC 1 cut(s) 81
BstBAI YACGTR 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 373
BstDEI CTNAG 2 cut(s) 334, 488
BstDSI CCRYGG 1 cut(s) 1114
BstENI CCTNNNNNAGG 1 cut(s) 1262
BstF5I GGATG 4 cut(s) 432, 996, 1240, 1269
BstFNI CGCG 4 cut(s) 371, 373, 375, 1433
BstH2I RGCGCY 1 cut(s) 334
BstHHI GCGC 3 cut(s) 333, 373, 375
BstKTI GATC 9 cut(s) 13, 37, 340, 400, 481, 628, 763, 898, 1321
BstMAI GTCTC 1 cut(s) 106
BstMBI GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
BstMWI GCNNNNNNNGC 5 cut(s) 72, 81, 213, 370, 1415
BstNI CCWGG 2 cut(s) 831, 1384
BstSCI CCNGG 3 cut(s) 504, 829, 1382
BstSFI CTRYAG 1 cut(s) 315
BstSLI GKGCMC 1 cut(s) 25
BstUI CGCG 4 cut(s) 371, 373, 375, 1433
BstV1I GCAGC 2 cut(s) 815, 1226
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 1 cut(s) 895
BstYI RGATCY 1 cut(s) 895
BstZ17I GTATAC 1 cut(s) 1341
Bsu15I ATCGAT 1 cut(s) 48
BsuRI GGCC 2 cut(s) 494, 956
BsuTUI ATCGAT 1 cut(s) 48
BtgI CCRYGG 1 cut(s) 1114
BtsCI GGATG 4 cut(s) 432, 996, 1240, 1269
BtsIMutI CAGTG 1 cut(s) 677
Cac8I GCNNGC 1 cut(s) 373
CciI TCATGA 1 cut(s) 886
CfoI GCGC 3 cut(s) 333, 373, 375
Cfr13I GGNCC 3 cut(s) 155, 492, 795
ClaI ATCGAT 1 cut(s) 48
Csp6I GTAC 2 cut(s) 671, 912
CviAII CATG 8 cut(s) 241, 421, 517, 545, 667, 839, 887, 1115
CviQI GTAC 2 cut(s) 671, 912
DdeI CTNAG 2 cut(s) 334, 488
DpnI GATC 9 cut(s) 12, 36, 339, 399, 480, 627, 762, 897, 1320
DpnII GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
DraI TTTAAA 1 cut(s) 1006
DraIII CACNNNGTG 1 cut(s) 1434
EaeI YGGCCR 1 cut(s) 954
Eam1104I CTCTTC 1 cut(s) 1174
EarI CTCTTC 1 cut(s) 1174
Eco130I CCWWGG 2 cut(s) 575, 1114
Eco47I GGWCC 2 cut(s) 155, 795
Eco47III AGCGCT 1 cut(s) 332
Eco57I CTGAAG 4 cut(s) 73, 432, 646, 701
Eco72I CACGTG 1 cut(s) 26
EcoNI CCTNNNNNAGG 1 cut(s) 1262
EcoO109I RGGNCCY 1 cut(s) 492
EcoRII CCWGG 2 cut(s) 829, 1382
EcoT14I CCWWGG 2 cut(s) 575, 1114
ErhI CCWWGG 2 cut(s) 575, 1114
FaeI CATG 8 cut(s) 244, 424, 520, 548, 670, 842, 890, 1118
FaqI GGGAC 1 cut(s) 808
FatI CATG 8 cut(s) 240, 420, 516, 544, 666, 838, 886, 1114
FauI CCCGC 1 cut(s) 1281
FbaI TGATCA 2 cut(s) 397, 625
FblI GTMKAC 1 cut(s) 1340
Fnu4HI GCNGC 2 cut(s) 804, 1240
FokI GGATG 4 cut(s) 439, 983, 1247, 1256
Fsp4HI GCNGC 2 cut(s) 804, 1240
FspBI CTAG 2 cut(s) 560, 1037
GlaI GCGC 3 cut(s) 332, 372, 374
GluI GCNGC 2 cut(s) 804, 1240
GsuI CTGGAG 2 cut(s) 130, 852
HaeII RGCGCY 1 cut(s) 334
HaeIII GGCC 2 cut(s) 494, 956
HapII CCGG 1 cut(s) 506
HhaI GCGC 3 cut(s) 333, 373, 375
Hin1II CATG 8 cut(s) 244, 424, 520, 548, 670, 842, 890, 1118
Hin6I GCGC 3 cut(s) 331, 371, 373
HinP1I GCGC 3 cut(s) 331, 371, 373
HincII GTYRAC 2 cut(s) 312, 439
HindII GTYRAC 2 cut(s) 312, 439
HinfI GANTC 6 cut(s) 815, 979, 1033, 1042, 1423, 1438
HpaII CCGG 1 cut(s) 506
HphI GGTGA 1 cut(s) 1420
Hpy166II GTNNAC 4 cut(s) 23, 312, 439, 1341
Hpy188III TCNNGA 9 cut(s) 56, 109, 122, 173, 286, 887, 1024, 1037, 1084
Hpy8I GTNNAC 4 cut(s) 23, 312, 439, 1341
HpyAV CCTTC 4 cut(s) 188, 344, 670, 1381
HpyCH4III ACNGT 6 cut(s) 43, 283, 443, 462, 524, 593
HpyCH4IV ACGT 4 cut(s) 25, 102, 141, 1056
HpyCH4V TGCA 8 cut(s) 23, 84, 386, 751, 1097, 1197, 1242, 1305
HpyF10VI GCNNNNNNNGC 5 cut(s) 72, 81, 213, 370, 1415
HpyF3I CTNAG 2 cut(s) 334, 488
HpySE526I ACGT 4 cut(s) 25, 102, 141, 1056
Hsp92II CATG 8 cut(s) 244, 424, 520, 548, 670, 842, 890, 1118
HspAI GCGC 3 cut(s) 331, 371, 373
KpnI GGTACC 1 cut(s) 674
Ksp22I TGATCA 2 cut(s) 397, 625
Kzo9I GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
LmnI GCTCC 1 cut(s) 561
Lsp1109I GCAGC 2 cut(s) 815, 1226
LweI GCATC 2 cut(s) 93, 727
MaeI CTAG 2 cut(s) 560, 1037
MaeII ACGT 4 cut(s) 25, 102, 141, 1056
MaeIII GTNAC 4 cut(s) 283, 473, 1214, 1322
MalI GATC 9 cut(s) 12, 36, 339, 399, 480, 627, 762, 897, 1320
MauBI CGCGCGCG 1 cut(s) 371
MboI GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
MboII GAAGA 5 cut(s) 79, 301, 425, 1161, 1190
MfeI CAATTG 1 cut(s) 1098
MflI RGATCY 1 cut(s) 895
MhlI GDGCHC 2 cut(s) 25, 108
MlsI TGGCCA 1 cut(s) 956
MluNI TGGCCA 1 cut(s) 956
MlyI GAGTC 2 cut(s) 1417, 1447
MmeI TCCRAC 3 cut(s) 259, 849, 1039
Mox20I TGGCCA 1 cut(s) 956
MscI TGGCCA 1 cut(s) 956
MseI TTAA 4 cut(s) 327, 942, 1005, 1461
MslI CAYNNNNRTG 2 cut(s) 18, 425
Msp20I TGGCCA 1 cut(s) 956
MspA1I CMGCKG 1 cut(s) 806
MspI CCGG 1 cut(s) 506
MspR9I CCNGG 3 cut(s) 506, 831, 1384
MunI CAATTG 1 cut(s) 1098
MvaI CCWGG 2 cut(s) 831, 1384
MvnI CGCG 4 cut(s) 371, 373, 375, 1433
MwoI GCNNNNNNNGC 5 cut(s) 72, 81, 213, 370, 1415
NciI CCSGG 1 cut(s) 506
NcoI CCATGG 1 cut(s) 1114
NdeII GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
NlaIII CATG 8 cut(s) 244, 424, 520, 548, 670, 842, 890, 1118
NlaIV GGNNCC 3 cut(s) 672, 796, 1088
NmuCI GTSAC 2 cut(s) 283, 473
PagI TCATGA 1 cut(s) 886
PauI GCGCGC 1 cut(s) 371
PcsI WCGNNNNNNNCGW 3 cut(s) 54, 63, 219
PfeI GAWTC 4 cut(s) 815, 979, 1033, 1042
PflMI CCANNNNNTGG 1 cut(s) 241
PkrI GCNGC 2 cut(s) 805, 1241
PleI GAGTC 2 cut(s) 1417, 1446
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 2 cut(s) 1417, 1446
Ppu21I YACGTR 1 cut(s) 26
PsiI TTATAA 1 cut(s) 702
Psp1406I AACGTT 1 cut(s) 1056
Psp6I CCWGG 2 cut(s) 829, 1382
PspCI CACGTG 1 cut(s) 26
PspGI CCWGG 2 cut(s) 829, 1382
PspN4I GGNNCC 3 cut(s) 672, 796, 1088
PspPI GGNCC 3 cut(s) 155, 492, 795
PsuI RGATCY 1 cut(s) 895
PteI GCGCGC 1 cut(s) 371
PvuII CAGCTG 1 cut(s) 806
RsaI GTAC 2 cut(s) 672, 913
RsaNI GTAC 2 cut(s) 671, 912
RseI CAYNNNNRTG 2 cut(s) 18, 425
SaqAI TTAA 4 cut(s) 327, 942, 1005, 1461
SatI GCNGC 2 cut(s) 804, 1240
Sau3AI GATC 9 cut(s) 10, 34, 337, 397, 478, 625, 760, 895, 1318
Sau96I GGNCC 3 cut(s) 155, 492, 795
SchI GAGTC 2 cut(s) 1417, 1447
ScrFI CCNGG 3 cut(s) 506, 831, 1384
SduI GDGCHC 2 cut(s) 25, 108
SfaNI GCATC 2 cut(s) 93, 727
SfcI CTRYAG 1 cut(s) 315
SinI GGWCC 2 cut(s) 155, 795
SmiMI CAYNNNNRTG 2 cut(s) 18, 425
SmlI CTYRAG 1 cut(s) 1358
SmoI CTYRAG 1 cut(s) 1358
SsiI CCGC 5 cut(s) 6, 715, 915, 1274, 1431
SspI AATATT 1 cut(s) 230
SspMI CTAG 2 cut(s) 560, 1037
StyD4I CCNGG 3 cut(s) 504, 829, 1382
StyI CCWWGG 2 cut(s) 575, 1114
TaaI ACNGT 6 cut(s) 43, 283, 443, 462, 524, 593
TaiI ACGT 4 cut(s) 28, 105, 144, 1059
TaqI TCGA 2 cut(s) 48, 57
TfiI GAWTC 4 cut(s) 815, 979, 1033, 1042
Tru1I TTAA 4 cut(s) 327, 942, 1005, 1461
Tru9I TTAA 4 cut(s) 327, 942, 1005, 1461
TscAI CASTG 1 cut(s) 684
TseFI GTSAC 2 cut(s) 283, 473
TseI GCWGC 2 cut(s) 803, 1239
Tsp45I GTSAC 2 cut(s) 283, 473
TspDTI ATGAA 7 cut(s) 152, 285, 363, 409, 521, 855, 875
TspRI CASTG 1 cut(s) 684
Van91I CCANNNNNTGG 1 cut(s) 241
VneI GTGCAC 1 cut(s) 21
VpaK11BI GGWCC 2 cut(s) 155, 795
XagI CCTNNNNNAGG 1 cut(s) 1262
XapI RAATTY 5 cut(s) 273, 356, 772, 906, 944
XbaI TCTAGA 1 cut(s) 1036
XmiI GTMKAC 1 cut(s) 1340
XspI CTAG 2 cut(s) 560, 1037
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.