Rw4G002480

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000417
Physical Location & Seq
Reverse (-)
4906603 .. 4908081
1479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G002480.1

Sequence Viewer

Length: 1479 bp
ATGTCCGCAAATCATAGAAGTGGTAGAGATCATACAGTTATCGATATTATCGATGACCTCGAGAAAAGCAACAAATGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCTGGAGACAAAATCCAGCAGCATATACACCTGACGTTGTTTCAATCGGACCTTTTCATAGTTATCGAGGCAAGGAGGAAGGTAAAGGAGGCAAAGAAGGCAATGGCGAAAAATATTTCCAACTCATGGAACGAGTGAAAGCTAGCTATTTGAAAGAAATTCTCACGGGTATGAAGAAAACTTTGAAAGAGTTGACTGCAGAAGTCATTAAGCTCTCAGATCAAAAGAATGAAGGCGAATTTGATCAACGCGCGCGCGCTTTTTATGCAGAACCACTTGATGATCATATTTCCTCTGAAGAGTTCATCAAGATGATGATAGTTGACGGCTGCTTCCTAATTCAACTGTTTCGGAAGTGTTACGATCCGAAACTCAGGGCCTTTGATGACCCAGTGTTCAACATGGACTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAAAATCAATTACCTTGGTTTGTTATCCACAGTTTGTATAGCCTTATCATTGAAGAATACCCTAATCAAGCCTTCCTCTCTACTCTCATCCTTGAAGCCTTCAGCATGCTACCATCATTGAAGCAAAGTTGCTCATCTTATAATAAGCATCTCCGCAGAAACAAGTGTTTTTGTGATTCTGATTATCTGCACATACTTGATCTGGTAAGAAATTCCATAGTAATTCCATCAGGGACCAAAGCGGCTGGAAAAGAATCTATGTCCAACCCTGAAGAACATGAAGTTGACTCTGGGAACAAACACGAGAGAAACAATAAAGTTGTTCATGAAGCTAGCATTGACCCAGATTCACATCAAATTCGTACCGCAACCGCTCTCTCAAAGGCAGATATTAAATTCGAAAGCGTAGAAAAGGAGAGCATAATGGACATCCATTTCGAAACGGGCGGGTGTTTCAGGAATGGGATTCTTAAGATTCCACTGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATCGAGCAATGCTACCATGGTTATTCAAATGAGGTTACATCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAAGGAAGATATGGAATTACTTTGCAAGCAAAAAGTAATAGGTAACTTGATGAGTGACGAAGATGGTTGTAAGTTCTTCAGCAACCTTTACAAGGACATCCCGCACAACAAATTCTCGCACAACAAATTCTACTATAGTGCTCTTTGCAAGCAGGTGAATGATCGTTACCAACTGAGACGGTATACATGGTTGGCTTTACTCAAGATTGAAAAGTTTTCTAACCCCTGGAGACTTTTGGCTTTCGGGATAGCTATTATCGCTTTGTTTCTCACCTCGTGGAGCTCGGCAAACAACATTCGGGTTAACTGGCATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

492

Amino Acids

56.81

Weight (kDa)

6.54

Isoelectric Point (pI)

44.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 30 - 477 8.7e-96 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 696
AarI CACCTGC 1 cut(s) 1303
Acc36I ACCTGC 1 cut(s) 1303
AccB7I CCANNNNNTGG 1 cut(s) 235
AccBSI CCGCTC 1 cut(s) 929
AccI GTMKAC 1 cut(s) 1343
AccII CGCG 4 cut(s) 360, 362, 364, 366
AciI CCGC 7 cut(s) 6, 709, 797, 921, 927, 1002, 1262
AclI AACGTT 1 cut(s) 1044
AclWI GGATC 1 cut(s) 467
AcsI RAATTY 7 cut(s) 267, 347, 766, 912, 950, 1271, 1286
AcuI CTGAAG 5 cut(s) 76, 426, 640, 846, 1222
AdeI CACNNNGTG 1 cut(s) 1437
AfaI GTAC 1 cut(s) 919
AfiI CCNNNNNNNGG 2 cut(s) 235, 1252
AflII CTTAAG 1 cut(s) 1025
AjnI CCWGG 1 cut(s) 1385
AluBI AGCT 6 cut(s) 251, 255, 322, 887, 1412, 1443
AluI AGCT 6 cut(s) 251, 255, 322, 887, 1412, 1443
Alw21I GWGCWC 3 cut(s) 111, 1303, 1445
Alw26I GTCTC 3 cut(s) 109, 1330, 1384
AlwI GGATC 1 cut(s) 467
Ama87I CYCGRG 1 cut(s) 59
AoxI GGCC 1 cut(s) 486
ApeKI GCWGC 2 cut(s) 128, 438
ApoI RAATTY 7 cut(s) 267, 347, 766, 912, 950, 1271, 1286
ArsI GACNNNNNNTTYG 2 cut(s) 974, 1006
AspLEI GCGC 4 cut(s) 362, 364, 366, 368
AspS9I GGNCC 3 cut(s) 158, 486, 789
AsuHPI GGTGA 2 cut(s) 1327, 1423
AsuII TTCGAA 2 cut(s) 954, 993
AsuNHI GCTAGC 2 cut(s) 251, 887
AvaI CYCGRG 1 cut(s) 59
AvaII GGWCC 2 cut(s) 158, 789
BanII GRGCYC 1 cut(s) 1445
BauI CACGAG 2 cut(s) 857, 1435
Bbv12I GWGCWC 3 cut(s) 111, 1303, 1445
BbvI GCAGC 2 cut(s) 140, 425
BccI CCATC 4 cut(s) 676, 790, 1142, 1217
BceAI ACGGC 1 cut(s) 451
BciT130I CCWGG 1 cut(s) 1387
BclI TGATCA 2 cut(s) 352, 391
BcoDI GTCTC 3 cut(s) 109, 1330, 1384
BfaI CTAG 3 cut(s) 252, 554, 888
BfmI CTRYAG 2 cut(s) 306, 1294
BfrI CTTAAG 1 cut(s) 1025
BfuAI ACCTGC 1 cut(s) 1303
BisI GCNGC 3 cut(s) 129, 439, 798
BlsI GCNGC 3 cut(s) 130, 440, 799
Bme1390I CCNGG 1 cut(s) 1387
Bme18I GGWCC 2 cut(s) 158, 789
BmeT110I CYCGRG 1 cut(s) 59
BmgT120I GGNCC 3 cut(s) 158, 486, 789
BmiI GGNNCC 2 cut(s) 790, 1076
BmrFI CCNGG 1 cut(s) 1387
BmrI ACTGGG 1 cut(s) 494
BmsI GCATC 2 cut(s) 96, 712
BmtI GCTAGC 2 cut(s) 255, 891
BmuI ACTGGG 1 cut(s) 494
BpmI CTGGAG 2 cut(s) 133, 1408
Bpu14I TTCGAA 2 cut(s) 954, 993
BpuEI CTTGAG 1 cut(s) 1346
Bsa29I ATCGAT 2 cut(s) 42, 51
BsaBI GATNNNNATC 1 cut(s) 906
BsaJI CCNNGG 3 cut(s) 569, 1102, 1385
Bsc4I CCNNNNNNNGG 2 cut(s) 235, 1252
Bse1I ACTGG 2 cut(s) 500, 1472
Bse3DI GCAATG 3 cut(s) 217, 1080, 1100
Bse8I GATNNNNATC 1 cut(s) 906
BseBI CCWGG 1 cut(s) 1387
BseCI ATCGAT 2 cut(s) 42, 51
BseDI CCNNGG 3 cut(s) 569, 1102, 1385
BseGI GGATG 3 cut(s) 642, 984, 1257
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 2 cut(s) 235, 1252
BseMI GCAATG 3 cut(s) 217, 1080, 1100
BseMII CTCAG 3 cut(s) 339, 496, 1325
BseNI ACTGG 2 cut(s) 500, 1472
BsePI GCGCGC 3 cut(s) 360, 362, 364
BseXI GCAGC 2 cut(s) 140, 425
BsgI GTGCAG 1 cut(s) 728
Bsh1236I CGCG 4 cut(s) 360, 362, 364, 366
BshFI GGCC 1 cut(s) 488
BshVI ATCGAT 2 cut(s) 42, 51
BsiHKAI GWGCWC 3 cut(s) 111, 1303, 1445
BsiHKCI CYCGRG 1 cut(s) 59
BslFI GGGAC 1 cut(s) 802
BslI CCNNNNNNNGG 2 cut(s) 235, 1252
BsmAI GTCTC 3 cut(s) 109, 1330, 1384
BsmBI CGTCTC 1 cut(s) 1330
BsmFI GGGAC 1 cut(s) 802
BsnI GGCC 1 cut(s) 488
BsoBI CYCGRG 1 cut(s) 59
Bsp119I TTCGAA 2 cut(s) 954, 993
Bsp1286I GDGCHC 3 cut(s) 111, 1303, 1445
Bsp143I GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
Bsp19I CCATGG 1 cut(s) 1102
BspACI CCGC 7 cut(s) 6, 709, 797, 921, 927, 1002, 1262
BspANI GGCC 1 cut(s) 488
BspCNI CTCAG 3 cut(s) 338, 495, 1326
BspDI ATCGAT 2 cut(s) 42, 51
BspFNI CGCG 4 cut(s) 360, 362, 364, 366
BspHI TCATGA 1 cut(s) 880
BspLI GGNNCC 2 cut(s) 790, 1076
BspMAI CTGCAG 1 cut(s) 310
BspMI ACCTGC 1 cut(s) 1303
BspOI GCTAGC 2 cut(s) 255, 891
BspPI GGATC 1 cut(s) 467
BspT104I TTCGAA 2 cut(s) 954, 993
BspTI CTTAAG 1 cut(s) 1025
BsrBI CCGCTC 1 cut(s) 929
BsrDI GCAATG 3 cut(s) 217, 1080, 1100
BsrI ACTGG 2 cut(s) 500, 1472
BssECI CCNNGG 3 cut(s) 569, 1102, 1385
BssHII GCGCGC 3 cut(s) 360, 362, 364
BssMI GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
BssNAI GTATAC 1 cut(s) 1344
BssSI CACGAG 2 cut(s) 857, 1435
BssT1I CCWWGG 2 cut(s) 569, 1102
Bst1107I GTATAC 1 cut(s) 1344
Bst2BI CACGAG 2 cut(s) 857, 1435
Bst2UI CCWGG 1 cut(s) 1387
Bst4CI ACNGT 5 cut(s) 37, 456, 518, 587, 1341
Bst6I CTCTTC 2 cut(s) 402, 1162
BstAFI CTTAAG 1 cut(s) 1025
BstAPI GCANNNNNTGC 2 cut(s) 75, 84
BstBI TTCGAA 2 cut(s) 954, 993
BstC8I GCNNGC 8 cut(s) 253, 362, 364, 366, 662, 889, 1187, 1310
BstDEI CTNAG 3 cut(s) 325, 482, 1334
BstDSI CCRYGG 1 cut(s) 1102
BstENI CCTNNNNNAGG 1 cut(s) 1250
BstF5I GGATG 3 cut(s) 642, 984, 1257
BstFNI CGCG 4 cut(s) 360, 362, 364, 366
BstHHI GCGC 4 cut(s) 362, 364, 366, 368
BstKTI GATC 7 cut(s) 31, 331, 355, 394, 475, 757, 1324
BstMAI GTCTC 3 cut(s) 109, 1330, 1384
BstMBI GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
BstMWI GCNNNNNNNGC 5 cut(s) 75, 84, 207, 374, 1418
BstNI CCWGG 1 cut(s) 1387
BstNSI RCATGY 1 cut(s) 664
BstSCI CCNGG 1 cut(s) 1385
BstSFI CTRYAG 2 cut(s) 306, 1294
BstUI CGCG 4 cut(s) 360, 362, 364, 366
BstV1I GCAGC 2 cut(s) 140, 425
BstXI CCANNNNNNTGG 1 cut(s) 1141
BstZ17I GTATAC 1 cut(s) 1344
Bsu15I ATCGAT 2 cut(s) 42, 51
BsuRI GGCC 1 cut(s) 488
BsuTUI ATCGAT 2 cut(s) 42, 51
BtgI CCRYGG 1 cut(s) 1102
BtsCI GGATG 3 cut(s) 642, 984, 1257
BtsI GCAGTG 1 cut(s) 1034
BtsIMutI CAGTG 2 cut(s) 507, 1034
BveI ACCTGC 1 cut(s) 1303
Cac8I GCNNGC 8 cut(s) 253, 362, 364, 366, 662, 889, 1187, 1310
CciI TCATGA 1 cut(s) 880
CfoI GCGC 4 cut(s) 362, 364, 366, 368
Cfr13I GGNCC 3 cut(s) 158, 486, 789
ClaI ATCGAT 2 cut(s) 42, 51
Csp6I GTAC 1 cut(s) 918
CviAII CATG 9 cut(s) 235, 511, 539, 661, 833, 881, 1103, 1347, 1472
CviQI GTAC 1 cut(s) 918
DdeI CTNAG 3 cut(s) 325, 482, 1334
DpnI GATC 7 cut(s) 30, 330, 354, 393, 474, 756, 1323
DpnII GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
DraIII CACNNNGTG 1 cut(s) 1437
Eam1104I CTCTTC 2 cut(s) 402, 1162
EarI CTCTTC 2 cut(s) 402, 1162
Ecl136II GAGCTC 1 cut(s) 1443
Eco130I CCWWGG 2 cut(s) 569, 1102
Eco24I GRGCYC 1 cut(s) 1445
Eco47I GGWCC 2 cut(s) 158, 789
Eco53kI GAGCTC 1 cut(s) 1443
Eco57I CTGAAG 5 cut(s) 76, 426, 640, 846, 1222
Eco88I CYCGRG 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 1443
EcoNI CCTNNNNNAGG 1 cut(s) 1250
EcoO109I RGGNCCY 1 cut(s) 486
EcoRII CCWGG 1 cut(s) 1385
EcoT14I CCWWGG 2 cut(s) 569, 1102
EcoT22I ATGCAT 1 cut(s) 89
EcoT38I GRGCYC 1 cut(s) 1445
ErhI CCWWGG 2 cut(s) 569, 1102
Esp3I CGTCTC 1 cut(s) 1330
FaeI CATG 9 cut(s) 238, 514, 542, 664, 836, 884, 1106, 1350, 1475
FaqI GGGAC 1 cut(s) 802
FatI CATG 9 cut(s) 234, 510, 538, 660, 832, 880, 1102, 1346, 1471
FauI CCCGC 2 cut(s) 995, 1269
FbaI TGATCA 2 cut(s) 352, 391
FblI GTMKAC 1 cut(s) 1343
Fnu4HI GCNGC 3 cut(s) 129, 439, 798
FokI GGATG 3 cut(s) 629, 971, 1244
FriOI GRGCYC 1 cut(s) 1445
Fsp4HI GCNGC 3 cut(s) 129, 439, 798
FspBI CTAG 3 cut(s) 252, 554, 888
GlaI GCGC 4 cut(s) 361, 363, 365, 367
GluI GCNGC 3 cut(s) 129, 439, 798
GsuI CTGGAG 2 cut(s) 133, 1408
HaeIII GGCC 1 cut(s) 488
HhaI GCGC 4 cut(s) 362, 364, 366, 368
Hin1II CATG 9 cut(s) 238, 514, 542, 664, 836, 884, 1106, 1350, 1475
Hin6I GCGC 4 cut(s) 360, 362, 364, 366
HinP1I GCGC 4 cut(s) 360, 362, 364, 366
HincII GTYRAC 4 cut(s) 303, 433, 841, 1465
HindII GTYRAC 4 cut(s) 303, 433, 841, 1465
HinfI GANTC 6 cut(s) 731, 809, 842, 902, 1021, 1030
HpaI GTTAAC 1 cut(s) 1465
HphI GGTGA 2 cut(s) 1327, 1423
Hpy166II GTNNAC 5 cut(s) 303, 433, 841, 1344, 1465
Hpy188I TCNGA 8 cut(s) 95, 158, 328, 406, 462, 477, 736, 1060
Hpy188III TCNNGA 8 cut(s) 61, 112, 418, 881, 1012, 1072, 1363, 1405
Hpy8I GTNNAC 5 cut(s) 303, 433, 841, 1344, 1465
HpyAV CCTTC 5 cut(s) 182, 200, 335, 637, 664
HpyCH4III ACNGT 5 cut(s) 37, 456, 518, 587, 1341
HpyCH4IV ACGT 3 cut(s) 105, 144, 1044
HpyCH4V TGCA 8 cut(s) 78, 87, 308, 377, 745, 1085, 1185, 1308
HpyF10VI GCNNNNNNNGC 5 cut(s) 75, 84, 207, 374, 1418
HpyF3I CTNAG 3 cut(s) 325, 482, 1334
HpySE526I ACGT 3 cut(s) 105, 144, 1044
Hsp92II CATG 9 cut(s) 238, 514, 542, 664, 836, 884, 1106, 1350, 1475
HspAI GCGC 4 cut(s) 360, 362, 364, 366
Ksp22I TGATCA 2 cut(s) 352, 391
KspAI GTTAAC 1 cut(s) 1465
Kzo9I GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
LmnI GCTCC 2 cut(s) 555, 1440
Lsp1109I GCAGC 2 cut(s) 140, 425
LweI GCATC 2 cut(s) 96, 712
MaeI CTAG 3 cut(s) 252, 554, 888
MaeII ACGT 3 cut(s) 105, 144, 1044
MaeIII GTNAC 5 cut(s) 467, 1120, 1202, 1214, 1325
MalI GATC 7 cut(s) 30, 330, 354, 393, 474, 756, 1323
MauBI CGCGCGCG 2 cut(s) 360, 362
MbiI CCGCTC 1 cut(s) 929
MboI GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
MboII GAAGA 9 cut(s) 82, 295, 419, 620, 839, 1149, 1178, 1228, 1232
MhlI GDGCHC 3 cut(s) 111, 1303, 1445
MlyI GAGTC 1 cut(s) 836
MmeI TCCRAC 3 cut(s) 253, 843, 1027
Mph1103I ATGCAT 1 cut(s) 89
MseI TTAA 4 cut(s) 318, 948, 1026, 1464
MslI CAYNNNNRTG 4 cut(s) 18, 278, 419, 1139
MspCI CTTAAG 1 cut(s) 1025
MspR9I CCNGG 1 cut(s) 1387
MvaI CCWGG 1 cut(s) 1387
MvnI CGCG 4 cut(s) 360, 362, 364, 366
MwoI GCNNNNNNNGC 5 cut(s) 75, 84, 207, 374, 1418
NcoI CCATGG 1 cut(s) 1102
NdeII GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
NheI GCTAGC 2 cut(s) 251, 887
NlaIII CATG 9 cut(s) 238, 514, 542, 664, 836, 884, 1106, 1350, 1475
NlaIV GGNNCC 2 cut(s) 790, 1076
NmeAIII GCCGAG 1 cut(s) 1424
NmuCI GTSAC 1 cut(s) 1214
NsiI ATGCAT 1 cut(s) 89
NspI RCATGY 1 cut(s) 664
NspV TTCGAA 2 cut(s) 954, 993
PaeI GCATGC 1 cut(s) 664
PaeR7I CTCGAG 1 cut(s) 59
PagI TCATGA 1 cut(s) 880
PaqCI CACCTGC 1 cut(s) 1303
PauI GCGCGC 3 cut(s) 360, 362, 364
PcsI WCGNNNNNNNCGW 2 cut(s) 48, 57
PfeI GAWTC 5 cut(s) 731, 809, 902, 1021, 1030
PflMI CCANNNNNTGG 1 cut(s) 235
PkrI GCNGC 3 cut(s) 130, 440, 799
PleI GAGTC 1 cut(s) 836
PpsI GAGTC 1 cut(s) 836
PsiI TTATAA 1 cut(s) 696
Psp124BI GAGCTC 1 cut(s) 1445
Psp1406I AACGTT 1 cut(s) 1044
Psp6I CCWGG 1 cut(s) 1385
PspGI CCWGG 1 cut(s) 1385
PspN4I GGNNCC 2 cut(s) 790, 1076
PspPI GGNCC 3 cut(s) 158, 486, 789
PstI CTGCAG 1 cut(s) 310
PteI GCGCGC 3 cut(s) 360, 362, 364
RsaI GTAC 1 cut(s) 919
RsaNI GTAC 1 cut(s) 918
RseI CAYNNNNRTG 4 cut(s) 18, 278, 419, 1139
SacI GAGCTC 1 cut(s) 1445
SaqAI TTAA 4 cut(s) 318, 948, 1026, 1464
SatI GCNGC 3 cut(s) 129, 439, 798
Sau3AI GATC 7 cut(s) 28, 328, 352, 391, 472, 754, 1321
Sau96I GGNCC 3 cut(s) 158, 486, 789
SchI GAGTC 1 cut(s) 836
ScrFI CCNGG 1 cut(s) 1387
SduI GDGCHC 3 cut(s) 111, 1303, 1445
SfaNI GCATC 2 cut(s) 96, 712
SfcI CTRYAG 2 cut(s) 306, 1294
Sfr274I CTCGAG 1 cut(s) 59
SfuI TTCGAA 2 cut(s) 954, 993
SinI GGWCC 2 cut(s) 158, 789
SlaI CTCGAG 1 cut(s) 59
SmiMI CAYNNNNRTG 4 cut(s) 18, 278, 419, 1139
SmlI CTYRAG 3 cut(s) 59, 1025, 1361
SmoI CTYRAG 3 cut(s) 59, 1025, 1361
SphI GCATGC 1 cut(s) 664
SsiI CCGC 7 cut(s) 6, 709, 797, 921, 927, 1002, 1262
SspI AATATT 1 cut(s) 224
SspMI CTAG 3 cut(s) 252, 554, 888
SstI GAGCTC 1 cut(s) 1445
StyD4I CCNGG 1 cut(s) 1385
StyI CCWWGG 2 cut(s) 569, 1102
TaaI ACNGT 5 cut(s) 37, 456, 518, 587, 1341
TaiI ACGT 3 cut(s) 108, 147, 1047
TaqI TCGA 7 cut(s) 42, 51, 60, 175, 954, 993, 1089
TauI GCSGC 1 cut(s) 800
TfiI GAWTC 5 cut(s) 731, 809, 902, 1021, 1030
Tru1I TTAA 4 cut(s) 318, 948, 1026, 1464
Tru9I TTAA 4 cut(s) 318, 948, 1026, 1464
TscAI CASTG 2 cut(s) 507, 1041
TseFI GTSAC 1 cut(s) 1214
TseI GCWGC 2 cut(s) 128, 438
Tsp45I GTSAC 1 cut(s) 1214
TspDTI ATGAA 8 cut(s) 155, 296, 354, 403, 515, 849, 869, 897
TspRI CASTG 2 cut(s) 507, 1041
Van91I CCANNNNNTGG 1 cut(s) 235
Vha464I CTTAAG 1 cut(s) 1025
VpaK11BI GGWCC 2 cut(s) 158, 789
XagI CCTNNNNNAGG 1 cut(s) 1250
XapI RAATTY 7 cut(s) 267, 347, 766, 912, 950, 1271, 1286
XceI RCATGY 1 cut(s) 664
XhoI CTCGAG 1 cut(s) 59
XmiI GTMKAC 1 cut(s) 1343
XspI CTAG 3 cut(s) 252, 554, 888
Zsp2I ATGCAT 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.