RchiOBHm_Chr4g0390041

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000417
Physical Location & Seq
Reverse (-)
5221905 .. 5223970
2066 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36311

Sequence Viewer

Length: 1410 bp
ATGTCTGCAAATCGTAAAAGTGGTAGAGATCATACAGTTATTGATGTTATCGATGACCGCAAGAAATGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACCCAGAAGCATATACACCTGACGTTGTTTCTATTGGACCCTTCCATCATTATCGACAAAAGCGAGGAAACGAGGACGGTAATGGAGGCAAAGAAGGAAAATGTGAGGAAGATTTCCAACTCATGGAACGAGTGAAAAACAGCTATTTGAATGAAATTCTCGCAGATATGAAGAATATTACTTTGGAAGAGTTCACTGCAAAAGTTATTGAGCTCTCAGATCAAAAGAATGAAGGTGCCTTTGAGGAACAAGCCCGCAATTTTTATGCAGAACCACTTGATCATATTTCTTCCAAAGACTTCATTGAGATGATGATAGTTGATGGTTGCTTCCTAGTTCAACTGTTTCGGAAGTCTAACGATCCGAAACTCAGGGCCTTTGATGACCCGGTGTTCAATATGGACTGTATGTTTCATTTCCTATGCCACGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGGCCATATTATCCACAGTTCGCATGGCCATACCCTAGATATAAACCCTGGTGAAGCTTCCCTCTCTATTCTCATCCTGAAAGCGCTCAGCATACTACCCTCACTGAAGCATAGTTGCGCAACCTATAAAACGCATCTCAAGAAAAACAACTGTCATTCAACTGATAAAGAAGGTACATCCAGCCCTGAAGAACATCAAGTGCACACTAGGAACAAAGACAAGAGAGGCAATAAAGCTGTCCATGAAGACCCAGATCAACATCAAATTCGTACCGCAACCGCACTGTCAAAGGCAGACATTAAATTCGAAAAAGTCGAAAGGGAGAGCATAATGGACATTCGATTCAACAAGGGTGGGTGGTTCAGGAATGGGATTCTTGAGATTCCACAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATGGTTATTCAAATGAGATAACGTCTTATGCCATCTTTATGGATAATCTCATCTCTTCAAATGAGGATATGGAATTACTTTGCAAGGAAAAAGTAATTGGTAACTGGATGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAATCTTTACAAGGACATCCCGCACGAGAAGTTCTACTATGTAGAGCTGTGCGAAAAAGTGAATGATTGTTACAGATCGAAATGGTTTACATGGTTGGCTTTACTCAAGAGTGAAAAATTTTCTAACCCTTGGAGAATTTTGGCTTTCGGGATAGGTATTATCGTTTTGACTCTCACCTCGTGGAACGCGGCAAACAACATTCGGATTCACTGGCATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

469

Amino Acids

54.41

Weight (kDa)

6.43

Isoelectric Point (pI)

44.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 454 1e-96 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 712
AccB1I GGYRCC 1 cut(s) 347
AccB7I CCANNNNNTGG 1 cut(s) 235
AccII CGCG 1 cut(s) 1376
AccIII TCCGGA 1 cut(s) 102
AciI CCGC 6 cut(s) 58, 367, 867, 873, 1208, 1376
AclI AACGTT 1 cut(s) 990
AclWI GGATC 1 cut(s) 467
AcoI YGGCCR 2 cut(s) 595, 619
AcsI RAATTY 5 cut(s) 267, 858, 896, 1304, 1323
AcuI CTGAAG 4 cut(s) 67, 719, 801, 1168
AdeI CACNNNGTG 1 cut(s) 1368
AfaI GTAC 2 cut(s) 769, 865
AfeI AGCGCT 1 cut(s) 678
AfiI CCNNNNNNNGG 1 cut(s) 235
AgsI TTSAA 7 cut(s) 262, 452, 508, 753, 940, 1059, 1107
AjnI CCWGG 1 cut(s) 640
AjuI GAANNNNNNNTTGG 4 cut(s) 278, 310, 1128, 1160
AluBI AGCT 6 cut(s) 255, 325, 650, 830, 985, 1234
AluI AGCT 6 cut(s) 255, 325, 650, 830, 985, 1234
Alw21I GWGCWC 3 cut(s) 102, 327, 798
Alw26I GTCTC 1 cut(s) 100
Alw44I GTGCAC 1 cut(s) 794
AlwI GGATC 1 cut(s) 467
Aor13HI TCCGGA 1 cut(s) 102
Aor51HI AGCGCT 1 cut(s) 678
AoxI GGCC 3 cut(s) 486, 595, 619
ApaLI GTGCAC 1 cut(s) 794
ApoI RAATTY 5 cut(s) 267, 858, 896, 1304, 1323
ArsI GACNNNNNNTTYG 2 cut(s) 881, 913
AspLEI GCGC 2 cut(s) 679, 713
AspS9I GGNCC 2 cut(s) 149, 486
AsuC2I CCSGG 1 cut(s) 500
AsuHPI GGTGA 2 cut(s) 656, 1354
AsuII TTCGAA 1 cut(s) 900
AvaII GGWCC 1 cut(s) 149
BaeGI GKGCMC 1 cut(s) 798
BalI TGGCCA 2 cut(s) 597, 621
BanI GGYRCC 1 cut(s) 347
BanII GRGCYC 1 cut(s) 327
BauI CACGAG 2 cut(s) 1211, 1366
BbsI GAAGAC 1 cut(s) 846
Bbv12I GWGCWC 3 cut(s) 102, 327, 798
BccI CCATC 4 cut(s) 165, 428, 1088, 1163
BciT130I CCWGG 1 cut(s) 642
BclI TGATCA 1 cut(s) 391
BcnI CCSGG 1 cut(s) 500
BcoDI GTCTC 1 cut(s) 100
BfaI CTAG 4 cut(s) 446, 554, 629, 801
BfoI RGCGCY 1 cut(s) 680
BisI GCNGC 1 cut(s) 1377
BlpI GCTNAGC 1 cut(s) 680
BlsI GCNGC 1 cut(s) 1378
Bme1390I CCNGG 2 cut(s) 500, 642
Bme18I GGWCC 1 cut(s) 149
BmgT120I GGNCC 2 cut(s) 149, 486
BmiI GGNNCC 3 cut(s) 151, 349, 1022
BmrFI CCNGG 2 cut(s) 500, 642
BmsI GCATC 2 cut(s) 87, 736
BpiI GAAGAC 1 cut(s) 846
Bpu1102I GCTNAGC 1 cut(s) 680
Bpu14I TTCGAA 1 cut(s) 900
BpuEI CTTGAG 3 cut(s) 716, 992, 1277
BpuMI CCSGG 1 cut(s) 500
Bsa29I ATCGAT 1 cut(s) 51
BsaBI GATNNNNATC 1 cut(s) 852
BsaJI CCNNGG 4 cut(s) 569, 640, 1048, 1316
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 1 cut(s) 235
Bse1I ACTGG 2 cut(s) 1157, 1403
Bse3DI GCAATG 2 cut(s) 1026, 1046
Bse8I GATNNNNATC 1 cut(s) 852
BseAI TCCGGA 1 cut(s) 102
BseBI CCWGG 1 cut(s) 642
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 4 cut(s) 569, 640, 1048, 1316
BseGI GGATG 4 cut(s) 666, 770, 1161, 1203
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 1 cut(s) 235
BseMI GCAATG 2 cut(s) 1026, 1046
BseMII CTCAG 3 cut(s) 342, 496, 694
BseNI ACTGG 2 cut(s) 1157, 1403
BseSI GKGCMC 1 cut(s) 798
Bsh1236I CGCG 1 cut(s) 1376
BshFI GGCC 3 cut(s) 488, 597, 621
BshNI GGYRCC 1 cut(s) 347
BshVI ATCGAT 1 cut(s) 51
BsiHKAI GWGCWC 3 cut(s) 102, 327, 798
BsiSI CCGG 2 cut(s) 103, 500
BslI CCNNNNNNNGG 1 cut(s) 235
BsmAI GTCTC 1 cut(s) 100
BsnI GGCC 3 cut(s) 488, 597, 621
Bsp119I TTCGAA 1 cut(s) 900
Bsp1286I GDGCHC 3 cut(s) 102, 327, 798
Bsp13I TCCGGA 1 cut(s) 102
Bsp143I GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
Bsp1720I GCTNAGC 1 cut(s) 680
Bsp19I CCATGG 1 cut(s) 1048
BspACI CCGC 6 cut(s) 58, 367, 867, 873, 1208, 1376
BspANI GGCC 3 cut(s) 488, 597, 621
BspCNI CTCAG 3 cut(s) 341, 495, 693
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 102
BspFNI CGCG 1 cut(s) 1376
BspLI GGNNCC 3 cut(s) 151, 349, 1022
BspPI GGATC 1 cut(s) 467
BspT104I TTCGAA 1 cut(s) 900
BspT107I GGYRCC 1 cut(s) 347
BsrDI GCAATG 2 cut(s) 1026, 1046
BsrI ACTGG 2 cut(s) 1157, 1403
BssECI CCNNGG 4 cut(s) 569, 640, 1048, 1316
BssMI GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
BssSI CACGAG 2 cut(s) 1211, 1366
BssT1I CCWWGG 3 cut(s) 569, 1048, 1316
Bst2BI CACGAG 2 cut(s) 1211, 1366
Bst2UI CCWGG 1 cut(s) 642
Bst4CI ACNGT 7 cut(s) 37, 191, 456, 518, 611, 746, 879
Bst6I CTCTTC 2 cut(s) 294, 1108
BstAPI GCANNNNNTGC 2 cut(s) 66, 75
BstBI TTCGAA 1 cut(s) 900
BstC8I GCNNGC 1 cut(s) 367
BstDEI CTNAG 3 cut(s) 328, 482, 680
BstDSI CCRYGG 1 cut(s) 1048
BstF5I GGATG 4 cut(s) 666, 770, 1161, 1203
BstFNI CGCG 1 cut(s) 1376
BstH2I RGCGCY 1 cut(s) 680
BstHHI GCGC 2 cut(s) 679, 713
BstKTI GATC 6 cut(s) 31, 334, 394, 475, 850, 1265
BstMAI GTCTC 1 cut(s) 100
BstMBI GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
BstMWI GCNNNNNNNGC 2 cut(s) 66, 75
BstNI CCWGG 1 cut(s) 642
BstSCI CCNGG 2 cut(s) 498, 640
BstSLI GKGCMC 1 cut(s) 798
BstUI CGCG 1 cut(s) 1376
BstV2I GAAGAC 1 cut(s) 846
BstXI CCANNNNNNTGG 1 cut(s) 1087
Bsu15I ATCGAT 1 cut(s) 51
BsuRI GGCC 3 cut(s) 488, 597, 621
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 1 cut(s) 1048
BtsCI GGATG 4 cut(s) 666, 770, 1161, 1203
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 4 cut(s) 306, 695, 875, 1396
Cac8I GCNNGC 1 cut(s) 367
CfoI GCGC 2 cut(s) 679, 713
Cfr13I GGNCC 2 cut(s) 149, 486
ClaI ATCGAT 1 cut(s) 51
Csp6I GTAC 2 cut(s) 768, 864
CspCI CAANNNNNGTGG 2 cut(s) 928, 963
CviAII CATG 5 cut(s) 235, 617, 836, 1049, 1278
CviQI GTAC 2 cut(s) 768, 864
DdeI CTNAG 3 cut(s) 328, 482, 680
DpnI GATC 6 cut(s) 30, 333, 393, 474, 849, 1264
DpnII GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
DraIII CACNNNGTG 1 cut(s) 1368
EaeI YGGCCR 2 cut(s) 595, 619
Eam1104I CTCTTC 2 cut(s) 294, 1108
EarI CTCTTC 2 cut(s) 294, 1108
Ecl136II GAGCTC 1 cut(s) 325
Eco130I CCWWGG 3 cut(s) 569, 1048, 1316
Eco24I GRGCYC 1 cut(s) 327
Eco47I GGWCC 1 cut(s) 149
Eco47III AGCGCT 1 cut(s) 678
Eco53kI GAGCTC 1 cut(s) 325
Eco57I CTGAAG 4 cut(s) 67, 719, 801, 1168
EcoICRI GAGCTC 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 486
EcoRII CCWGG 1 cut(s) 640
EcoT14I CCWWGG 3 cut(s) 569, 1048, 1316
EcoT22I ATGCAT 1 cut(s) 80
EcoT38I GRGCYC 1 cut(s) 327
ErhI CCWWGG 3 cut(s) 569, 1048, 1316
FaeI CATG 5 cut(s) 238, 620, 839, 1052, 1281
FatI CATG 5 cut(s) 234, 616, 835, 1048, 1277
FauI CCCGC 2 cut(s) 374, 1215
FbaI TGATCA 1 cut(s) 391
Fnu4HI GCNGC 1 cut(s) 1377
FokI GGATG 4 cut(s) 653, 757, 1168, 1190
FriOI GRGCYC 1 cut(s) 327
Fsp4HI GCNGC 1 cut(s) 1377
FspBI CTAG 4 cut(s) 446, 554, 629, 801
FspI TGCGCA 1 cut(s) 712
GlaI GCGC 2 cut(s) 678, 712
GluI GCNGC 1 cut(s) 1377
HaeII RGCGCY 1 cut(s) 680
HaeIII GGCC 3 cut(s) 488, 597, 621
HapII CCGG 2 cut(s) 103, 500
HhaI GCGC 2 cut(s) 679, 713
Hin1II CATG 5 cut(s) 238, 620, 839, 1052, 1281
Hin6I GCGC 2 cut(s) 677, 711
HinP1I GCGC 2 cut(s) 677, 711
HindIII AAGCTT 1 cut(s) 648
HinfI GANTC 6 cut(s) 559, 936, 967, 976, 1357, 1393
HpaII CCGG 2 cut(s) 103, 500
HphI GGTGA 2 cut(s) 656, 1354
Hpy166II GTNNAC 3 cut(s) 306, 796, 1275
Hpy188I TCNGA 6 cut(s) 86, 331, 462, 477, 1006, 1392
Hpy188III TCNNGA 8 cut(s) 103, 670, 733, 958, 971, 1018, 1294, 1336
Hpy8I GTNNAC 3 cut(s) 306, 796, 1275
HpyAV CCTTC 4 cut(s) 163, 200, 338, 758
HpyCH4III ACNGT 7 cut(s) 37, 191, 456, 518, 611, 746, 879
HpyCH4IV ACGT 4 cut(s) 96, 135, 990, 1070
HpyCH4V TGCA 8 cut(s) 8, 69, 78, 311, 380, 796, 1031, 1131
HpyF10VI GCNNNNNNNGC 2 cut(s) 66, 75
HpyF3I CTNAG 3 cut(s) 328, 482, 680
HpySE526I ACGT 4 cut(s) 96, 135, 990, 1070
Hsp92II CATG 5 cut(s) 238, 620, 839, 1052, 1281
HspAI GCGC 2 cut(s) 677, 711
Kpn2I TCCGGA 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
LmnI GCTCC 2 cut(s) 105, 555
LweI GCATC 2 cut(s) 87, 736
MaeI CTAG 4 cut(s) 446, 554, 629, 801
MaeII ACGT 4 cut(s) 96, 135, 990, 1070
MaeIII GTNAC 2 cut(s) 1148, 1256
MalI GATC 6 cut(s) 30, 333, 393, 474, 849, 1264
MboI GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
MfeI CAATTG 1 cut(s) 1032
MhlI GDGCHC 3 cut(s) 102, 327, 798
MlsI TGGCCA 2 cut(s) 597, 621
MluCI AATT 9 cut(s) 267, 370, 858, 896, 1032, 1121, 1143, 1304, 1323
MluNI TGGCCA 2 cut(s) 597, 621
MlyI GAGTC 1 cut(s) 1351
MmeI TCCRAC 2 cut(s) 253, 973
Mox20I TGGCCA 2 cut(s) 597, 621
Mph1103I ATGCAT 1 cut(s) 80
MroI TCCGGA 1 cut(s) 102
MscI TGGCCA 2 cut(s) 597, 621
MseI TTAA 1 cut(s) 894
MslI CAYNNNNRTG 2 cut(s) 419, 1085
Msp20I TGGCCA 2 cut(s) 597, 621
MspI CCGG 2 cut(s) 103, 500
MspR9I CCNGG 2 cut(s) 500, 642
MunI CAATTG 1 cut(s) 1032
MvaI CCWGG 1 cut(s) 642
MvnI CGCG 1 cut(s) 1376
MwoI GCNNNNNNNGC 2 cut(s) 66, 75
NciI CCSGG 1 cut(s) 500
NcoI CCATGG 1 cut(s) 1048
NdeII GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
NlaIII CATG 5 cut(s) 238, 620, 839, 1052, 1281
NlaIV GGNNCC 3 cut(s) 151, 349, 1022
NsbI TGCGCA 1 cut(s) 712
NsiI ATGCAT 1 cut(s) 80
NspV TTCGAA 1 cut(s) 900
PcsI WCGNNNNNNNCGW 2 cut(s) 172, 906
PfeI GAWTC 5 cut(s) 559, 936, 967, 976, 1393
PflMI CCANNNNNTGG 1 cut(s) 235
PkrI GCNGC 1 cut(s) 1378
PleI GAGTC 1 cut(s) 1351
PpsI GAGTC 1 cut(s) 1351
Psp124BI GAGCTC 1 cut(s) 327
Psp1406I AACGTT 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 640
PspGI CCWGG 1 cut(s) 640
PspN4I GGNNCC 3 cut(s) 151, 349, 1022
PspPI GGNCC 2 cut(s) 149, 486
RsaI GTAC 2 cut(s) 769, 865
RsaNI GTAC 2 cut(s) 768, 864
RseI CAYNNNNRTG 2 cut(s) 419, 1085
SacI GAGCTC 1 cut(s) 327
SaqAI TTAA 1 cut(s) 894
SatI GCNGC 1 cut(s) 1377
Sau3AI GATC 6 cut(s) 28, 331, 391, 472, 847, 1262
Sau96I GGNCC 2 cut(s) 149, 486
SchI GAGTC 1 cut(s) 1351
ScrFI CCNGG 2 cut(s) 500, 642
SduI GDGCHC 3 cut(s) 102, 327, 798
SfaNI GCATC 2 cut(s) 87, 736
SfuI TTCGAA 1 cut(s) 900
SinI GGWCC 1 cut(s) 149
SmiMI CAYNNNNRTG 2 cut(s) 419, 1085
SmlI CTYRAG 3 cut(s) 731, 971, 1292
SmoI CTYRAG 3 cut(s) 731, 971, 1292
Sse9I AATT 9 cut(s) 267, 370, 858, 896, 1032, 1121, 1143, 1304, 1323
SsiI CCGC 6 cut(s) 58, 367, 867, 873, 1208, 1376
SspI AATATT 1 cut(s) 289
SspMI CTAG 4 cut(s) 446, 554, 629, 801
SstI GAGCTC 1 cut(s) 327
StyD4I CCNGG 2 cut(s) 498, 640
StyI CCWWGG 3 cut(s) 569, 1048, 1316
TaaI ACNGT 7 cut(s) 37, 191, 456, 518, 611, 746, 879
TaiI ACGT 4 cut(s) 99, 138, 993, 1073
TaqI TCGA 6 cut(s) 51, 166, 900, 909, 934, 1265
TasI AATT 9 cut(s) 267, 370, 858, 896, 1032, 1121, 1143, 1304, 1323
TauI GCSGC 1 cut(s) 1379
TfiI GAWTC 5 cut(s) 559, 936, 967, 976, 1393
Tru1I TTAA 1 cut(s) 894
Tru9I TTAA 1 cut(s) 894
TscAI CASTG 4 cut(s) 313, 702, 882, 1403
TspDTI ATGAA 7 cut(s) 279, 296, 357, 403, 515, 852, 1179
TspRI CASTG 4 cut(s) 313, 702, 882, 1403
Van91I CCANNNNNTGG 1 cut(s) 235
VneI GTGCAC 1 cut(s) 794
VpaK11BI GGWCC 1 cut(s) 149
XapI RAATTY 5 cut(s) 267, 858, 896, 1304, 1323
XcmI CCANNNNNNNNNTGG 2 cut(s) 590, 614
XspI CTAG 4 cut(s) 446, 554, 629, 801
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.