Rw4G002410

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000417
Physical Location & Seq
Reverse (-)
4686564 .. 4688166
1603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G002410.1

Sequence Viewer

Length: 1455 bp
ATGTCTGTAAATCGTAAGAGTAAGGACTATACAGTTGTTAATATCGGCAAGAAATGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACTCAGAAGCATATACACCTGACGCTGTTTCAATCGGACCTTTTCATTATCGAGAAAAGCGAGGTAAGGAGGAAGGACAAGGTGGCAAAGAAGGCAAAGGCGAGGGAGATTTCCAACTCATGGAACGAGTGAAAGAGAGCTATGTGAAAGAAATTCTCTCAGATATGAAGAATATAACTTTGAAAGAGTTGACCGCAGAAGTCATCAAGCTCTCAGATCAAAAGAATGAAGGCGCGTTTGAGCAACGCTCGCGCGATTTTTATGCAGAACCACTCGATCATATTTCCTCTGAAGACTTCATCGTGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGAAAGTGTAACGATCCGAAACTCAGGGCCTTTGATGACCCAATATTCAACATGGATTGCATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAGAATCAACTTCCTTGGTTTGTTATCCACATTTTGTATGACGTTACCCATTATATATACCCTGATGAAGATTCCCTCTCTACTCTCATCATGAAAGCGCTCAGCATACTACCATCACTGAAGCAAAGTTGCTCATCTTATAATAAGCATCTCCGCAGACACAAGCATCATTCTGATGTTGATTATCTGCACATACTGGATCTGGTAAGAGCTTCCATAGTTGTTCCATTAAGGACCATAGAAGAGAGAGCGCATAAAGCAGCTGGAAACCCTGAAGAGCATGAAGTGCACTCTGGGAACAAAGACAAGAGAGACAGTATTAAAGTTGTTCATGAAGCTATCTTTGACCCAGATCTACATCAAATTCGTACCGCAGCCAAGCTCTCAAAGGCAGACATTAAATTCAGAATGGTCAAAAAGGAGAGCATAATGGATATCCGATTCGAGGAGGGTGGGTGGTTCTGCAATGGGATTCTTGAGATTCCACAACTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAACAATGCTACCATGGTTATTCAAACGAGATAACATCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAAGGAAGATATGGAATTGCTCTGCAAGGAAAAAGTAATAGGTAATTGGATGAGTGATGAAGATGGTTGTAAGTTTTTCAACAACCTTTACAAGGACATCCCGCATAACAAGTTCTACTATGTTGAGCTGTGCAAAAAATTGAATGATCGTTACAGATTGAAACGGTATACATGGTTGGCTTTACTCAAGATGGAAAAGTTTTCTAACCCCTGGAGAGCTTTGGCTTTTGGGGTAGCTATTATCGCTTTGTTTCTCTCCTCGTGGAGCTCGGCAAACAACATTCGGGTTAACTGGAATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

484

Amino Acids

56.42

Weight (kDa)

7.58

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 23 - 469 2.8e-97 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 681
AccB7I CCANNNNNTGG 1 cut(s) 220
AccI GTMKAC 1 cut(s) 1319
AccII CGCG 3 cut(s) 335, 352, 354
AccIII TCCGGA 1 cut(s) 90
AciI CCGC 4 cut(s) 294, 694, 912, 1253
AclI AACGTT 1 cut(s) 1035
AclWI GGATC 2 cut(s) 452, 747
AcsI RAATTY 3 cut(s) 252, 903, 941
AcuI CTGAAG 4 cut(s) 55, 411, 680, 834
AfaI GTAC 1 cut(s) 910
AfeI AGCGCT 1 cut(s) 639
AfiI CCNNNNNNNGG 3 cut(s) 220, 985, 1243
AjnI CCWGG 1 cut(s) 1361
Alw21I GWGCWC 3 cut(s) 90, 831, 1421
Alw26I GTCTC 2 cut(s) 88, 846
Alw44I GTGCAC 1 cut(s) 827
AlwI GGATC 2 cut(s) 452, 747
Aor13HI TCCGGA 1 cut(s) 90
Aor51HI AGCGCT 1 cut(s) 639
AoxI GGCC 1 cut(s) 471
ApaLI GTGCAC 1 cut(s) 827
ApeKI GCWGC 2 cut(s) 800, 914
ApoI RAATTY 3 cut(s) 252, 903, 941
AspLEI GCGC 4 cut(s) 335, 354, 640, 793
AspS9I GGNCC 3 cut(s) 137, 471, 774
AsuII TTCGAA 1 cut(s) 445
AvaII GGWCC 2 cut(s) 137, 774
BaeGI GKGCMC 1 cut(s) 831
BanII GRGCYC 1 cut(s) 1421
BauI CACGAG 1 cut(s) 1411
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 3 cut(s) 90, 831, 1421
BbvI GCAGC 2 cut(s) 812, 926
BccI CCATC 4 cut(s) 661, 1133, 1208, 1336
BcgI CGANNNNNNTGC 2 cut(s) 344, 378
BciT130I CCWGG 1 cut(s) 1363
BcoDI GTCTC 2 cut(s) 88, 846
BfaI CTAG 1 cut(s) 539
BfoI RGCGCY 1 cut(s) 641
BglII AGATCT 1 cut(s) 892
BisI GCNGC 2 cut(s) 801, 915
BlpI GCTNAGC 1 cut(s) 641
BlsI GCNGC 2 cut(s) 802, 916
Bme1390I CCNGG 1 cut(s) 1363
Bme18I GGWCC 2 cut(s) 137, 774
BmgT120I GGNCC 3 cut(s) 137, 471, 774
BmiI GGNNCC 1 cut(s) 1067
BmrFI CCNGG 1 cut(s) 1363
BmsI GCATC 3 cut(s) 75, 697, 715
BpiI GAAGAC 1 cut(s) 399
BplI GAGNNNNNCTC 2 cut(s) 332, 364
BpmI CTGGAG 1 cut(s) 1384
Bpu1102I GCTNAGC 1 cut(s) 641
Bpu14I TTCGAA 1 cut(s) 445
BpuEI CTTGAG 2 cut(s) 1037, 1322
BsaBI GATNNNNATC 1 cut(s) 897
BsaJI CCNNGG 3 cut(s) 554, 1093, 1361
BsaWI WCCGGW 1 cut(s) 90
BsaXI ACNNNNNCTCC 2 cut(s) 980, 1010
Bsc4I CCNNNNNNNGG 3 cut(s) 220, 985, 1243
Bse1I ACTGG 2 cut(s) 741, 1448
Bse3DI GCAATG 2 cut(s) 1012, 1071
Bse8I GATNNNNATC 1 cut(s) 897
BseAI TCCGGA 1 cut(s) 90
BseBI CCWGG 1 cut(s) 1363
BseDI CCNNGG 3 cut(s) 554, 1093, 1361
BseGI GGATG 2 cut(s) 1206, 1248
BseJI GATNNNNATC 1 cut(s) 897
BseLI CCNNNNNNNGG 3 cut(s) 220, 985, 1243
BseMI GCAATG 2 cut(s) 1012, 1071
BseMII CTCAG 5 cut(s) 117, 273, 327, 481, 655
BseNI ACTGG 2 cut(s) 741, 1448
BseRI GAGGAG 2 cut(s) 1001, 1399
BseSI GKGCMC 1 cut(s) 831
BseXI GCAGC 2 cut(s) 812, 926
BsgI GTGCAG 1 cut(s) 713
Bsh1236I CGCG 3 cut(s) 335, 352, 354
BshFI GGCC 1 cut(s) 473
BsiHKAI GWGCWC 3 cut(s) 90, 831, 1421
BsiSI CCGG 1 cut(s) 91
BslI CCNNNNNNNGG 3 cut(s) 220, 985, 1243
BsmAI GTCTC 2 cut(s) 88, 846
BsnI GGCC 1 cut(s) 473
Bsp119I TTCGAA 1 cut(s) 445
Bsp1286I GDGCHC 3 cut(s) 90, 831, 1421
Bsp13I TCCGGA 1 cut(s) 90
Bsp143I GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
Bsp1720I GCTNAGC 1 cut(s) 641
Bsp19I CCATGG 1 cut(s) 1093
BspACI CCGC 4 cut(s) 294, 694, 912, 1253
BspANI GGCC 1 cut(s) 473
BspCNI CTCAG 5 cut(s) 116, 272, 326, 480, 654
BspEI TCCGGA 1 cut(s) 90
BspFNI CGCG 3 cut(s) 335, 352, 354
BspHI TCATGA 2 cut(s) 630, 871
BspLI GGNNCC 1 cut(s) 1067
BspPI GGATC 2 cut(s) 452, 747
BspQI GCTCTTC 1 cut(s) 810
BspT104I TTCGAA 1 cut(s) 445
BsrDI GCAATG 2 cut(s) 1012, 1071
BsrI ACTGG 2 cut(s) 741, 1448
BssECI CCNNGG 3 cut(s) 554, 1093, 1361
BssMI GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
BssNAI GTATAC 1 cut(s) 1320
BssSI CACGAG 1 cut(s) 1411
BssT1I CCWWGG 2 cut(s) 554, 1093
Bst1107I GTATAC 1 cut(s) 1320
Bst2BI CACGAG 1 cut(s) 1411
Bst2UI CCWGG 1 cut(s) 1363
Bst4CI ACNGT 5 cut(s) 34, 422, 441, 857, 1317
Bst6I CTCTTC 3 cut(s) 777, 810, 1153
BstAPI GCANNNNNTGC 3 cut(s) 54, 63, 826
BstBI TTCGAA 1 cut(s) 445
BstC8I GCNNGC 1 cut(s) 350
BstDEI CTNAG 5 cut(s) 103, 259, 313, 467, 641
BstDSI CCRYGG 1 cut(s) 1093
BstENI CCTNNNNNAGG 1 cut(s) 1241
BstF5I GGATG 2 cut(s) 1206, 1248
BstFNI CGCG 3 cut(s) 335, 352, 354
BstH2I RGCGCY 1 cut(s) 641
BstHHI GCGC 4 cut(s) 335, 354, 640, 793
BstKTI GATC 6 cut(s) 319, 379, 460, 742, 895, 1300
BstMAI GTCTC 2 cut(s) 88, 846
BstMBI GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
BstMWI GCNNNNNNNGC 7 cut(s) 54, 63, 192, 349, 797, 826, 1394
BstNI CCWGG 1 cut(s) 1363
BstNSI RCATGY 1 cut(s) 508
BstSCI CCNGG 1 cut(s) 1361
BstSLI GKGCMC 1 cut(s) 831
BstUI CGCG 3 cut(s) 335, 352, 354
BstV1I GCAGC 2 cut(s) 812, 926
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 2 cut(s) 739, 892
BstXI CCANNNNNNTGG 1 cut(s) 1132
BstYI RGATCY 2 cut(s) 739, 892
BstZ17I GTATAC 1 cut(s) 1320
BsuRI GGCC 1 cut(s) 473
BtgI CCRYGG 1 cut(s) 1093
BtsCI GGATG 2 cut(s) 1206, 1248
BtsIMutI CAGTG 1 cut(s) 656
Cac8I GCNNGC 1 cut(s) 350
CciI TCATGA 2 cut(s) 630, 871
CfoI GCGC 4 cut(s) 335, 354, 640, 793
Cfr13I GGNCC 3 cut(s) 137, 471, 774
CseI GACGC 1 cut(s) 131
Csp6I GTAC 1 cut(s) 909
CviAII CATG 9 cut(s) 220, 496, 505, 524, 631, 821, 872, 1094, 1323
CviQI GTAC 1 cut(s) 909
DdeI CTNAG 5 cut(s) 103, 259, 313, 467, 641
DpnI GATC 6 cut(s) 318, 378, 459, 741, 894, 1299
DpnII GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
Eam1104I CTCTTC 3 cut(s) 777, 810, 1153
EarI CTCTTC 3 cut(s) 777, 810, 1153
Ecl136II GAGCTC 1 cut(s) 1419
Eco130I CCWWGG 2 cut(s) 554, 1093
Eco24I GRGCYC 1 cut(s) 1421
Eco32I GATATC 1 cut(s) 976
Eco47I GGWCC 2 cut(s) 137, 774
Eco47III AGCGCT 1 cut(s) 639
Eco53kI GAGCTC 1 cut(s) 1419
Eco57I CTGAAG 4 cut(s) 55, 411, 680, 834
EcoICRI GAGCTC 1 cut(s) 1419
EcoNI CCTNNNNNAGG 1 cut(s) 1241
EcoO109I RGGNCCY 1 cut(s) 471
EcoRII CCWGG 1 cut(s) 1361
EcoRV GATATC 1 cut(s) 976
EcoT14I CCWWGG 2 cut(s) 554, 1093
EcoT22I ATGCAT 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 1421
ErhI CCWWGG 2 cut(s) 554, 1093
FaeI CATG 9 cut(s) 223, 499, 508, 527, 634, 824, 875, 1097, 1326
FatI CATG 9 cut(s) 219, 495, 504, 523, 630, 820, 871, 1093, 1322
FauI CCCGC 1 cut(s) 1260
FblI GTMKAC 1 cut(s) 1319
Fnu4HI GCNGC 2 cut(s) 801, 915
FokI GGATG 2 cut(s) 1213, 1235
FriOI GRGCYC 1 cut(s) 1421
Fsp4HI GCNGC 2 cut(s) 801, 915
FspBI CTAG 1 cut(s) 539
GlaI GCGC 4 cut(s) 334, 353, 639, 792
GluI GCNGC 2 cut(s) 801, 915
GsuI CTGGAG 1 cut(s) 1384
HaeII RGCGCY 1 cut(s) 641
HaeIII GGCC 1 cut(s) 473
HapII CCGG 1 cut(s) 91
HgaI GACGC 1 cut(s) 131
HhaI GCGC 4 cut(s) 335, 354, 640, 793
Hin1II CATG 9 cut(s) 223, 499, 508, 527, 634, 824, 875, 1097, 1326
Hin6I GCGC 4 cut(s) 333, 352, 638, 791
HinP1I GCGC 4 cut(s) 333, 352, 638, 791
HincII GTYRAC 3 cut(s) 291, 418, 1441
HindII GTYRAC 3 cut(s) 291, 418, 1441
HinfI GANTC 5 cut(s) 544, 611, 981, 1012, 1021
HpaI GTTAAC 1 cut(s) 1441
HpaII CCGG 1 cut(s) 91
Hpy166II GTNNAC 5 cut(s) 291, 418, 829, 1320, 1441
Hpy188III TCNNGA 8 cut(s) 91, 152, 403, 631, 872, 1016, 1063, 1339
Hpy8I GTNNAC 5 cut(s) 291, 418, 829, 1320, 1441
HpyAV CCTTC 3 cut(s) 167, 185, 323
HpyCH4III ACNGT 5 cut(s) 34, 422, 441, 857, 1317
HpyCH4IV ACGT 3 cut(s) 84, 582, 1035
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 63, 192, 349, 797, 826, 1394
HpyF3I CTNAG 5 cut(s) 103, 259, 313, 467, 641
HpySE526I ACGT 3 cut(s) 84, 582, 1035
Hsp92II CATG 9 cut(s) 223, 499, 508, 527, 634, 824, 875, 1097, 1326
HspAI GCGC 4 cut(s) 333, 352, 638, 791
Kpn2I TCCGGA 1 cut(s) 90
KspAI GTTAAC 1 cut(s) 1441
Kzo9I GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 3 cut(s) 93, 540, 1416
Lsp1109I GCAGC 2 cut(s) 812, 926
LweI GCATC 3 cut(s) 75, 697, 715
MaeI CTAG 1 cut(s) 539
MaeII ACGT 3 cut(s) 84, 582, 1035
MaeIII GTNAC 3 cut(s) 452, 583, 1301
MalI GATC 6 cut(s) 318, 378, 459, 741, 894, 1299
MboI GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
MboII GAAGA 9 cut(s) 61, 280, 404, 620, 794, 827, 1140, 1169, 1223
MfeI CAATTG 1 cut(s) 1077
MflI RGATCY 2 cut(s) 739, 892
MhlI GDGCHC 3 cut(s) 90, 831, 1421
MluCI AATT 8 cut(s) 252, 432, 903, 941, 1077, 1166, 1195, 1289
MmeI TCCRAC 2 cut(s) 238, 1018
Mph1103I ATGCAT 1 cut(s) 68
MroI TCCGGA 1 cut(s) 90
MseI TTAA 5 cut(s) 39, 770, 861, 939, 1440
MslI CAYNNNNRTG 3 cut(s) 404, 714, 1130
MspA1I CMGCKG 1 cut(s) 803
MspI CCGG 1 cut(s) 91
MspR9I CCNGG 1 cut(s) 1363
MunI CAATTG 1 cut(s) 1077
MvaI CCWGG 1 cut(s) 1363
MvnI CGCG 3 cut(s) 335, 352, 354
MwoI GCNNNNNNNGC 7 cut(s) 54, 63, 192, 349, 797, 826, 1394
NcoI CCATGG 1 cut(s) 1093
NdeII GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
NlaIII CATG 9 cut(s) 223, 499, 508, 527, 634, 824, 875, 1097, 1326
NlaIV GGNNCC 1 cut(s) 1067
NmeAIII GCCGAG 1 cut(s) 1400
NsiI ATGCAT 1 cut(s) 68
NspI RCATGY 1 cut(s) 508
NspV TTCGAA 1 cut(s) 445
PagI TCATGA 2 cut(s) 630, 871
PciSI GCTCTTC 1 cut(s) 810
PcsI WCGNNNNNNNCGW 1 cut(s) 157
PfeI GAWTC 5 cut(s) 544, 611, 981, 1012, 1021
PflMI CCANNNNNTGG 1 cut(s) 220
PkrI GCNGC 2 cut(s) 802, 916
PsiI TTATAA 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 1421
Psp1406I AACGTT 1 cut(s) 1035
Psp6I CCWGG 1 cut(s) 1361
PspGI CCWGG 1 cut(s) 1361
PspN4I GGNNCC 1 cut(s) 1067
PspPI GGNCC 3 cut(s) 137, 471, 774
PsuI RGATCY 2 cut(s) 739, 892
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 1 cut(s) 910
RsaNI GTAC 1 cut(s) 909
RseI CAYNNNNRTG 3 cut(s) 404, 714, 1130
SacI GAGCTC 1 cut(s) 1421
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 5 cut(s) 39, 770, 861, 939, 1440
SatI GCNGC 2 cut(s) 801, 915
Sau3AI GATC 6 cut(s) 316, 376, 457, 739, 892, 1297
Sau96I GGNCC 3 cut(s) 137, 471, 774
ScrFI CCNGG 1 cut(s) 1363
SduI GDGCHC 3 cut(s) 90, 831, 1421
SfaNI GCATC 3 cut(s) 75, 697, 715
SfuI TTCGAA 1 cut(s) 445
SinI GGWCC 2 cut(s) 137, 774
SmiMI CAYNNNNRTG 3 cut(s) 404, 714, 1130
SmlI CTYRAG 2 cut(s) 1016, 1337
SmoI CTYRAG 2 cut(s) 1016, 1337
Sse9I AATT 8 cut(s) 252, 432, 903, 941, 1077, 1166, 1195, 1289
SsiI CCGC 4 cut(s) 294, 694, 912, 1253
SspI AATATT 1 cut(s) 489
SspMI CTAG 1 cut(s) 539
SstI GAGCTC 1 cut(s) 1421
StyD4I CCNGG 1 cut(s) 1361
StyI CCWWGG 2 cut(s) 554, 1093
TaaI ACNGT 5 cut(s) 34, 422, 441, 857, 1317
TaiI ACGT 3 cut(s) 87, 585, 1038
TaqI TCGA 4 cut(s) 151, 375, 445, 984
TasI AATT 8 cut(s) 252, 432, 903, 941, 1077, 1166, 1195, 1289
TfiI GAWTC 5 cut(s) 544, 611, 981, 1012, 1021
Tru1I TTAA 5 cut(s) 39, 770, 861, 939, 1440
Tru9I TTAA 5 cut(s) 39, 770, 861, 939, 1440
TscAI CASTG 1 cut(s) 663
TseI GCWGC 2 cut(s) 800, 914
TspRI CASTG 1 cut(s) 663
Van91I CCANNNNNTGG 1 cut(s) 220
VneI GTGCAC 1 cut(s) 827
VpaK11BI GGWCC 2 cut(s) 137, 774
XagI CCTNNNNNAGG 1 cut(s) 1241
XapI RAATTY 3 cut(s) 252, 903, 941
XceI RCATGY 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 1319
XspI CTAG 1 cut(s) 539
Zsp2I ATGCAT 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.