Rh4DG024700

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000417
Physical Location & Seq
Reverse (-)
4537088 .. 4538955
1868 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG024700.1

Sequence Viewer

Length: 1452 bp
ATGTCTGCAAATCGTAAGAGTAAAGATTATACAGTTATTAATATTGGCAAGAAAAGCAAGAAATGCATCTTCAGAGTTCCTAACGTGCTCCGGAGACAAAACTCAGAAGCATATACACCTGACGTTGTTTCAATCGGACCTTTTCATTATCGAGAAAAGCGAGGTAAGGAGGAAGGTAAAGGTGGCAAAGAAGGCAAAGGCGAGGGAGATTTCCAACTCACGGAACGAGTGAAAGAGAGCTATGTGAAAGAAATTCTCTCAGATATGAAGAATATAACTTTGAAAGAGTTGACCGCAGAAGTCATTAAGCTCTCAGATCAAAAGAATGAAGGCGCGTTTGAGCAACGCGTGCGCGATTTTTATGCAGAACCACTTGATCATATTTCCTCTGAAGACTTCATCGAGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTAACGATCCGAAACTCAGGGCCTTTGATGACCCAATATTCAACATGGATTGCATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGACCTTGCCCATTATATATACCCTGATGAAGCTTCCCTCTCTACTCTCATCATGAAAGCGCTCAGCATACTACCATCACTGAAGCAAAGTTGCTCATCTTATAATAAGCATCTCCGCAGACACAAGCATCATTCTGATGTTGATTATCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTGTTCCATTAATGACCATAGAAGAGAGAGAGCATAAAGCAGCTGGAAACCCTGAAGAGCATGAAGTGCACTCTGGGAAGAAAGACAAGAGAGACAATAAAGTTGTTCATGAAGCTATCTTTGACCCAGATCTACATCAAATTCGTACCGCAACCGCGCTCTCAAAGGCCGACATTAAATTCAGAATGGTAAAAAAGGAGAGTATAATGGATATCCGATTCGAGAAGGGTGGGTGGTTCTGCAATGGGACTCTTGAGATTCCACAACTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAACCTCATTGCAATTGAACAATGCTACCATGGTTATTCAAACGAGATAACATCTTATGCCATCTTTATGGATAACCTCATCTCTTCAAAGGAAGATATGGAATTACTTTGCAAGGAAAAAGTAATAGGTAATTGGATGAGTGATGAAGATGGTTGTAAGTTTTTCAACAACCTTTACAAGGACATCCCGCACAACAAGTTCTACTATGTTGAGCTGTGCAAAAAATTGAATGATCGTTACAGATTGAAACGGTATACATGGTTGGCTTTACTCAAGATGGAAAAGTTTTCTAACCCCTGGAGAGCTTTGGCTTTTGGGATAGCTATTATCGCTTTGTTTCTCTCCTCGTGGAGCTCGGCAAACAACATTCGGGTTAACTGGGATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

483

Amino Acids

56.31

Weight (kDa)

7.6

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 23 - 468 3.8e-98 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 681
AccI GTMKAC 1 cut(s) 1316
AccII CGCG 4 cut(s) 335, 348, 354, 917
AccIII TCCGGA 1 cut(s) 90
AciI CCGC 5 cut(s) 294, 694, 909, 915, 1250
AclI AACGTT 1 cut(s) 1032
AclWI GGATC 1 cut(s) 452
AcsI RAATTY 3 cut(s) 252, 900, 938
AcuI CTGAAG 4 cut(s) 55, 411, 680, 834
AfaI GTAC 1 cut(s) 907
AfeI AGCGCT 1 cut(s) 639
AfiI CCNNNNNNNGG 2 cut(s) 220, 1240
AflIII ACRYGT 1 cut(s) 346
AjnI CCWGG 1 cut(s) 1358
Alw21I GWGCWC 3 cut(s) 90, 831, 1418
Alw26I GTCTC 2 cut(s) 88, 846
Alw44I GTGCAC 1 cut(s) 827
AlwI GGATC 1 cut(s) 452
Aor13HI TCCGGA 1 cut(s) 90
Aor51HI AGCGCT 1 cut(s) 639
AoxI GGCC 2 cut(s) 471, 927
ApaLI GTGCAC 1 cut(s) 827
ApeKI GCWGC 1 cut(s) 800
ApoI RAATTY 3 cut(s) 252, 900, 938
AseI ATTAAT 2 cut(s) 39, 770
AspLEI GCGC 4 cut(s) 335, 354, 640, 919
AspS9I GGNCC 2 cut(s) 137, 471
AvaII GGWCC 1 cut(s) 137
BaeGI GKGCMC 1 cut(s) 831
BanII GRGCYC 1 cut(s) 1418
BauI CACGAG 1 cut(s) 1408
BbsI GAAGAC 1 cut(s) 399
Bbv12I GWGCWC 3 cut(s) 90, 831, 1418
BbvI GCAGC 1 cut(s) 812
BccI CCATC 4 cut(s) 661, 1130, 1205, 1333
BcgI CGANNNNNNTGC 2 cut(s) 344, 378
BciT130I CCWGG 1 cut(s) 1360
BclI TGATCA 1 cut(s) 376
BcoDI GTCTC 2 cut(s) 88, 846
BfaI CTAG 1 cut(s) 539
BfoI RGCGCY 1 cut(s) 641
BglII AGATCT 1 cut(s) 889
BisI GCNGC 1 cut(s) 801
BlpI GCTNAGC 1 cut(s) 641
BlsI GCNGC 1 cut(s) 802
Bme1390I CCNGG 1 cut(s) 1360
Bme18I GGWCC 1 cut(s) 137
BmgT120I GGNCC 2 cut(s) 137, 471
BmiI GGNNCC 1 cut(s) 1064
BmrFI CCNGG 1 cut(s) 1360
BmrI ACTGGG 1 cut(s) 1450
BmsI GCATC 3 cut(s) 75, 697, 715
BmuI ACTGGG 1 cut(s) 1450
BpiI GAAGAC 1 cut(s) 399
BpmI CTGGAG 1 cut(s) 1381
Bpu1102I GCTNAGC 1 cut(s) 641
BpuEI CTTGAG 2 cut(s) 1034, 1319
BsaBI GATNNNNATC 1 cut(s) 894
BsaJI CCNNGG 3 cut(s) 554, 1090, 1358
BsaWI WCCGGW 1 cut(s) 90
Bsc4I CCNNNNNNNGG 2 cut(s) 220, 1240
Bse1I ACTGG 1 cut(s) 1445
Bse3DI GCAATG 2 cut(s) 1009, 1068
Bse8I GATNNNNATC 1 cut(s) 894
BseAI TCCGGA 1 cut(s) 90
BseBI CCWGG 1 cut(s) 1360
BseDI CCNNGG 3 cut(s) 554, 1090, 1358
BseGI GGATG 2 cut(s) 1203, 1245
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 2 cut(s) 220, 1240
BseMI GCAATG 2 cut(s) 1009, 1068
BseMII CTCAG 5 cut(s) 117, 273, 327, 481, 655
BseNI ACTGG 1 cut(s) 1445
BseRI GAGGAG 1 cut(s) 1396
BseSI GKGCMC 1 cut(s) 831
BseXI GCAGC 1 cut(s) 812
BsgI GTGCAG 1 cut(s) 713
Bsh1236I CGCG 4 cut(s) 335, 348, 354, 917
BshFI GGCC 2 cut(s) 473, 929
BsiHKAI GWGCWC 3 cut(s) 90, 831, 1418
BsiSI CCGG 1 cut(s) 91
BslFI GGGAC 1 cut(s) 1021
BslI CCNNNNNNNGG 2 cut(s) 220, 1240
BsmAI GTCTC 2 cut(s) 88, 846
BsmFI GGGAC 1 cut(s) 1021
BsnI GGCC 2 cut(s) 473, 929
Bsp1286I GDGCHC 3 cut(s) 90, 831, 1418
Bsp13I TCCGGA 1 cut(s) 90
Bsp143I GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
Bsp1720I GCTNAGC 1 cut(s) 641
Bsp19I CCATGG 1 cut(s) 1090
BspACI CCGC 5 cut(s) 294, 694, 909, 915, 1250
BspANI GGCC 2 cut(s) 473, 929
BspCNI CTCAG 5 cut(s) 116, 272, 326, 480, 654
BspEI TCCGGA 1 cut(s) 90
BspFNI CGCG 4 cut(s) 335, 348, 354, 917
BspHI TCATGA 2 cut(s) 630, 868
BspLI GGNNCC 1 cut(s) 1064
BspPI GGATC 1 cut(s) 452
BspQI GCTCTTC 1 cut(s) 810
BsrDI GCAATG 2 cut(s) 1009, 1068
BsrI ACTGG 1 cut(s) 1445
BssECI CCNNGG 3 cut(s) 554, 1090, 1358
BssMI GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
BssNAI GTATAC 1 cut(s) 1317
BssSI CACGAG 1 cut(s) 1408
BssT1I CCWWGG 2 cut(s) 554, 1090
Bst1107I GTATAC 1 cut(s) 1317
Bst2BI CACGAG 1 cut(s) 1408
Bst2UI CCWGG 1 cut(s) 1360
Bst4CI ACNGT 4 cut(s) 34, 422, 441, 1314
Bst6I CTCTTC 3 cut(s) 777, 810, 1150
BstAPI GCANNNNNTGC 3 cut(s) 63, 349, 826
BstC8I GCNNGC 1 cut(s) 350
BstDEI CTNAG 5 cut(s) 103, 259, 313, 467, 641
BstDSI CCRYGG 1 cut(s) 1090
BstENI CCTNNNNNAGG 1 cut(s) 1238
BstF5I GGATG 2 cut(s) 1203, 1245
BstFNI CGCG 4 cut(s) 335, 348, 354, 917
BstH2I RGCGCY 1 cut(s) 641
BstHHI GCGC 4 cut(s) 335, 354, 640, 919
BstKTI GATC 6 cut(s) 319, 379, 460, 742, 892, 1297
BstMAI GTCTC 2 cut(s) 88, 846
BstMBI GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
BstMWI GCNNNNNNNGC 6 cut(s) 54, 63, 192, 349, 826, 1391
BstNI CCWGG 1 cut(s) 1360
BstNSI RCATGY 1 cut(s) 508
BstSCI CCNGG 1 cut(s) 1358
BstSLI GKGCMC 1 cut(s) 831
BstUI CGCG 4 cut(s) 335, 348, 354, 917
BstV1I GCAGC 1 cut(s) 812
BstV2I GAAGAC 1 cut(s) 399
BstX2I RGATCY 1 cut(s) 889
BstXI CCANNNNNNTGG 1 cut(s) 1129
BstYI RGATCY 1 cut(s) 889
BstZ17I GTATAC 1 cut(s) 1317
BsuRI GGCC 2 cut(s) 473, 929
BtgI CCRYGG 1 cut(s) 1090
BtsCI GGATG 2 cut(s) 1203, 1245
BtsIMutI CAGTG 1 cut(s) 656
Cac8I GCNNGC 1 cut(s) 350
CciI TCATGA 2 cut(s) 630, 868
CfoI GCGC 4 cut(s) 335, 354, 640, 919
Cfr13I GGNCC 2 cut(s) 137, 471
Csp6I GTAC 1 cut(s) 906
CviAII CATG 8 cut(s) 496, 505, 524, 631, 821, 869, 1091, 1320
CviQI GTAC 1 cut(s) 906
DdeI CTNAG 5 cut(s) 103, 259, 313, 467, 641
DpnI GATC 6 cut(s) 318, 378, 459, 741, 891, 1296
DpnII GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
Eam1104I CTCTTC 3 cut(s) 777, 810, 1150
EarI CTCTTC 3 cut(s) 777, 810, 1150
Ecl136II GAGCTC 1 cut(s) 1416
Eco130I CCWWGG 2 cut(s) 554, 1090
Eco24I GRGCYC 1 cut(s) 1418
Eco32I GATATC 1 cut(s) 973
Eco47I GGWCC 1 cut(s) 137
Eco47III AGCGCT 1 cut(s) 639
Eco53kI GAGCTC 1 cut(s) 1416
Eco57I CTGAAG 4 cut(s) 55, 411, 680, 834
EcoICRI GAGCTC 1 cut(s) 1416
EcoNI CCTNNNNNAGG 1 cut(s) 1238
EcoO109I RGGNCCY 1 cut(s) 471
EcoRII CCWGG 1 cut(s) 1358
EcoRV GATATC 1 cut(s) 973
EcoT14I CCWWGG 2 cut(s) 554, 1090
EcoT22I ATGCAT 1 cut(s) 68
EcoT38I GRGCYC 1 cut(s) 1418
ErhI CCWWGG 2 cut(s) 554, 1090
FaeI CATG 8 cut(s) 499, 508, 527, 634, 824, 872, 1094, 1323
FaqI GGGAC 1 cut(s) 1021
FatI CATG 8 cut(s) 495, 504, 523, 630, 820, 868, 1090, 1319
FauI CCCGC 1 cut(s) 1257
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 1 cut(s) 1316
Fnu4HI GCNGC 1 cut(s) 801
FokI GGATG 2 cut(s) 1210, 1232
FriOI GRGCYC 1 cut(s) 1418
Fsp4HI GCNGC 1 cut(s) 801
FspBI CTAG 1 cut(s) 539
GlaI GCGC 4 cut(s) 334, 353, 639, 918
GluI GCNGC 1 cut(s) 801
GsuI CTGGAG 1 cut(s) 1381
HaeII RGCGCY 1 cut(s) 641
HaeIII GGCC 2 cut(s) 473, 929
HapII CCGG 1 cut(s) 91
HhaI GCGC 4 cut(s) 335, 354, 640, 919
Hin1II CATG 8 cut(s) 499, 508, 527, 634, 824, 872, 1094, 1323
Hin6I GCGC 4 cut(s) 333, 352, 638, 917
HinP1I GCGC 4 cut(s) 333, 352, 638, 917
HincII GTYRAC 3 cut(s) 291, 418, 1438
HindII GTYRAC 3 cut(s) 291, 418, 1438
HindIII AAGCTT 1 cut(s) 609
HinfI GANTC 4 cut(s) 544, 978, 1009, 1018
HpaI GTTAAC 1 cut(s) 1438
HpaII CCGG 1 cut(s) 91
Hpy166II GTNNAC 5 cut(s) 291, 418, 829, 1317, 1438
Hpy188III TCNNGA 9 cut(s) 91, 152, 403, 631, 869, 982, 1013, 1060, 1336
Hpy8I GTNNAC 5 cut(s) 291, 418, 829, 1317, 1438
HpyAV CCTTC 4 cut(s) 167, 185, 323, 979
HpyCH4III ACNGT 4 cut(s) 34, 422, 441, 1314
HpyCH4IV ACGT 3 cut(s) 84, 123, 1032
HpyF10VI GCNNNNNNNGC 6 cut(s) 54, 63, 192, 349, 826, 1391
HpyF3I CTNAG 5 cut(s) 103, 259, 313, 467, 641
HpySE526I ACGT 3 cut(s) 84, 123, 1032
Hsp92II CATG 8 cut(s) 499, 508, 527, 634, 824, 872, 1094, 1323
HspAI GCGC 4 cut(s) 333, 352, 638, 917
Kpn2I TCCGGA 1 cut(s) 90
Ksp22I TGATCA 1 cut(s) 376
KspAI GTTAAC 1 cut(s) 1438
Kzo9I GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
LguI GCTCTTC 1 cut(s) 810
LmnI GCTCC 3 cut(s) 93, 540, 1413
Lsp1109I GCAGC 1 cut(s) 812
LweI GCATC 3 cut(s) 75, 697, 715
MaeI CTAG 1 cut(s) 539
MaeII ACGT 3 cut(s) 84, 123, 1032
MaeIII GTNAC 2 cut(s) 452, 1298
MalI GATC 6 cut(s) 318, 378, 459, 741, 891, 1296
MboI GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
MboII GAAGA 9 cut(s) 61, 280, 404, 794, 827, 850, 1137, 1166, 1220
MfeI CAATTG 1 cut(s) 1074
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 3 cut(s) 90, 831, 1418
MluCI AATT 8 cut(s) 252, 432, 900, 938, 1074, 1163, 1192, 1286
MluI ACGCGT 1 cut(s) 346
MlyI GAGTC 1 cut(s) 1003
MmeI TCCRAC 2 cut(s) 238, 1015
MnlI CCTC 8 cut(s) 155, 163, 196, 397, 626, 1076, 1148, 1417
Mph1103I ATGCAT 1 cut(s) 68
MroI TCCGGA 1 cut(s) 90
MseI TTAA 5 cut(s) 39, 306, 770, 936, 1437
MslI CAYNNNNRTG 3 cut(s) 404, 714, 1127
MspA1I CMGCKG 1 cut(s) 803
MspI CCGG 1 cut(s) 91
MspR9I CCNGG 1 cut(s) 1360
MunI CAATTG 1 cut(s) 1074
MvaI CCWGG 1 cut(s) 1360
MvnI CGCG 4 cut(s) 335, 348, 354, 917
MwoI GCNNNNNNNGC 6 cut(s) 54, 63, 192, 349, 826, 1391
NcoI CCATGG 1 cut(s) 1090
NdeII GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
NlaIII CATG 8 cut(s) 499, 508, 527, 634, 824, 872, 1094, 1323
NlaIV GGNNCC 1 cut(s) 1064
NmeAIII GCCGAG 1 cut(s) 1397
NsiI ATGCAT 1 cut(s) 68
NspI RCATGY 1 cut(s) 508
PagI TCATGA 2 cut(s) 630, 868
PciSI GCTCTTC 1 cut(s) 810
PcsI WCGNNNNNNNCGW 1 cut(s) 157
PfeI GAWTC 3 cut(s) 544, 978, 1018
PkrI GCNGC 1 cut(s) 802
PleI GAGTC 1 cut(s) 1003
PpsI GAGTC 1 cut(s) 1003
PshBI ATTAAT 2 cut(s) 39, 770
PsiI TTATAA 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 1418
Psp1406I AACGTT 1 cut(s) 1032
Psp6I CCWGG 1 cut(s) 1358
PspGI CCWGG 1 cut(s) 1358
PspN4I GGNNCC 1 cut(s) 1064
PspPI GGNCC 2 cut(s) 137, 471
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 1 cut(s) 907
RsaNI GTAC 1 cut(s) 906
RseI CAYNNNNRTG 3 cut(s) 404, 714, 1127
SacI GAGCTC 1 cut(s) 1418
SapI GCTCTTC 1 cut(s) 810
SaqAI TTAA 5 cut(s) 39, 306, 770, 936, 1437
SatI GCNGC 1 cut(s) 801
Sau3AI GATC 6 cut(s) 316, 376, 457, 739, 889, 1294
Sau96I GGNCC 2 cut(s) 137, 471
SchI GAGTC 1 cut(s) 1003
ScrFI CCNGG 1 cut(s) 1360
SduI GDGCHC 3 cut(s) 90, 831, 1418
SfaNI GCATC 3 cut(s) 75, 697, 715
SinI GGWCC 1 cut(s) 137
SmiMI CAYNNNNRTG 3 cut(s) 404, 714, 1127
SmlI CTYRAG 2 cut(s) 1013, 1334
SmoI CTYRAG 2 cut(s) 1013, 1334
Sse9I AATT 8 cut(s) 252, 432, 900, 938, 1074, 1163, 1192, 1286
SsiI CCGC 5 cut(s) 294, 694, 909, 915, 1250
SspI AATATT 2 cut(s) 43, 489
SspMI CTAG 1 cut(s) 539
SstI GAGCTC 1 cut(s) 1418
StyD4I CCNGG 1 cut(s) 1358
StyI CCWWGG 2 cut(s) 554, 1090
TaaI ACNGT 4 cut(s) 34, 422, 441, 1314
TaiI ACGT 3 cut(s) 87, 126, 1035
TaqI TCGA 3 cut(s) 151, 402, 981
TasI AATT 8 cut(s) 252, 432, 900, 938, 1074, 1163, 1192, 1286
TfiI GAWTC 3 cut(s) 544, 978, 1018
Tru1I TTAA 5 cut(s) 39, 306, 770, 936, 1437
Tru9I TTAA 5 cut(s) 39, 306, 770, 936, 1437
TscAI CASTG 1 cut(s) 663
TseI GCWGC 1 cut(s) 800
TspGWI ACGGA 1 cut(s) 236
TspRI CASTG 1 cut(s) 663
VneI GTGCAC 1 cut(s) 827
VpaK11BI GGWCC 1 cut(s) 137
VspI ATTAAT 2 cut(s) 39, 770
XagI CCTNNNNNAGG 1 cut(s) 1238
XapI RAATTY 3 cut(s) 252, 900, 938
XceI RCATGY 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 1316
XspI CTAG 1 cut(s) 539
Zsp2I ATGCAT 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.