Rorug01G0020300

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000417
Physical Location & Seq
Forward (+)
3322862 .. 3325015
2154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0020300.1

Sequence Viewer

Length: 1425 bp
ATGGCGCAACCAAACTCGGTGAAAATAGTGGAGATTTGCAGGGTGGCTCCAAAACCAGGCGCACCAGATCTGTTGTCCCTTCCACTGACCTACTTTGACTCGCTCTGGCTAAGGTTTCCACCCGTACAACACCTTTACTTCTATGAATTAACATCTTCTTCTCCCACTAGTACTGATTCTGTAGTACTTGCCTATCTCAAAACCTCGCTCTCCCTCACTCTCAAACACTTTGTACCTCTCGCCGGAAACCTAACTTGGCCTCAAGACTCCCACACACCCATTATCAACTATGTCCAAGGCGACGCCGTTTCACTCACAGTAGCTGAGTCCGCTGCTGATAATTTCGACCACCTTTCGAGCAACAACGTCTTTCTCGAATCCAAAGCTTACCATCCACTTGTTCCCCAATTGGAGTCGTCTCATGAACGAACTGCAGCCATTGCATTGCAAATAACCCTATTTCCTGGCCGTGGCTTCGCCATTGGAACAGCCATGCACCATGCAATCCTCGATGGCAAAACAATGAACTCGTTCGTTAAGTCGTGGGCTCATGCATGCAGCAAACAGATTGAAAGTGGCTTGTCCATTGGATCAGATATTTCGTTACCAGAGCAGCTCAAGCCATTATATGATAGAACGGTCATCTATGATCCGACTGGGCTTGGACTCGAATCCATCTACTTAAACAATTGGCAAAACTTGGATGGCCCCAACAACAGAAGCGTAAAGGTTTGGGAATTCAAAGCTCCACCAGATGACTCAGTTCGAAGCATCTTTGAGTTCACACGCACACAGATACAAAGCCTGAGGCAGATGGTACTAGAAAAAATTTCTGATCCCGTACATCTTCATTTGTCAACGTTTTCTCTAGCTTGTGCTTACACTTGGGTTTGTTTAGTCAAGGCACAAGAAATAGAAGCCAACAAAGTTTCTATTCAAGCCTTTAGCGTGGACTGTAGGTCTCGCTTGGACCCTCCGGTACCTGAAAATTATTTTGGAAATTGCGTGAGGGGTGTCATCGGGTTTGCGGAAGCAAAGGAGTTATTGGGTGAAGATGGGTTGGTTGTGGCGGTCACAGCAATTAGTGAAACTATAAAGGGGTTTGGACAAGAATGGGGTTTTGAAAGGGCCCACGAGGTTTACTTTTCGAAAATCAAGGACTTGTCTCAGGCTGAGGGAATATATTCTACTGCTGGTTCGCACCGATTTCAGATATACGATACGAACTTTGGATGGGGTAGGCCGAAAAAAGTTGAGGTGGTTTCTATAGATAGGACCGGAGCGATTTCAGTCTCCGATTCCAAGAATGGTGGTGGAGGTATAGAGATTGGGGTGGTTTTGAAAAAAGATTGTATGGAAGCTTTCGCTTCTGTATTCGCCGAAGGATTTGGGGACTCATTTGGAAAGCATCGAGTCAGGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

474

Amino Acids

52.2

Weight (kDa)

5.88

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 8 - 458 7.4e-51 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 979
AccB1I GGYRCC 1 cut(s) 979
AciI CCGC 3 cut(s) 330, 1028, 1070
AclI AACGTT 1 cut(s) 860
AclWI GGATC 3 cut(s) 598, 644, 830
AcoI YGGCCR 1 cut(s) 466
AcsI RAATTY 2 cut(s) 737, 828
AcyI GRCGYC 1 cut(s) 303
AfaI GTAC 7 cut(s) 126, 172, 186, 234, 819, 843, 981
AfiI CCNNNNNNNGG 3 cut(s) 56, 242, 470
AgsI TTSAA 5 cut(s) 572, 742, 938, 1124, 1342
AhdI GACNNNNNGTC 1 cut(s) 958
AhlI ACTAGT 1 cut(s) 167
AjnI CCWGG 2 cut(s) 55, 463
AjuI GAANNNNNNNTTGG 4 cut(s) 238, 270, 978, 1010
AluBI AGCT 6 cut(s) 323, 386, 616, 746, 872, 1361
AluI AGCT 6 cut(s) 323, 386, 616, 746, 872, 1361
Alw26I GTCTC 4 cut(s) 423, 966, 1170, 1297
AlwI GGATC 3 cut(s) 598, 644, 830
AlwNI CAGNNNCTG 1 cut(s) 323
AoxI GGCC 5 cut(s) 257, 466, 706, 1128, 1241
ApaI GGGCCC 1 cut(s) 1132
ApeKI GCWGC 4 cut(s) 332, 434, 558, 613
ApoI RAATTY 2 cut(s) 737, 828
Asp700I GAANNNNTTC 2 cut(s) 530, 1183
Asp718I GGTACC 1 cut(s) 979
AspLEI GCGC 2 cut(s) 7, 62
AspS9I GGNCC 5 cut(s) 707, 970, 1128, 1129, 1275
AsuHPI GGTGA 2 cut(s) 31, 1061
AsuII TTCGAA 2 cut(s) 766, 1148
AvaII GGWCC 2 cut(s) 970, 1275
AxyI CCTNAGG 1 cut(s) 806
BaeGI GKGCMC 1 cut(s) 1132
BanI GGYRCC 1 cut(s) 979
BanII GRGCYC 2 cut(s) 550, 1132
BauI CACGAG 1 cut(s) 1133
BbvCI CCTCAGC 1 cut(s) 1173
BbvI GCAGC 4 cut(s) 319, 446, 570, 625
BccI CCATC 7 cut(s) 399, 506, 683, 698, 808, 1049, 1227
BceAI ACGGC 2 cut(s) 290, 453
BciT130I CCWGG 2 cut(s) 57, 465
BcoDI GTCTC 4 cut(s) 423, 966, 1170, 1297
BcuI ACTAGT 1 cut(s) 167
BfaI CTAG 3 cut(s) 168, 821, 869
BfmI CTRYAG 4 cut(s) 180, 432, 955, 1266
BglII AGATCT 1 cut(s) 67
BisI GCNGC 4 cut(s) 333, 435, 559, 614
BlsI GCNGC 4 cut(s) 334, 436, 560, 615
BmcAI AGTACT 2 cut(s) 172, 186
Bme1390I CCNGG 2 cut(s) 57, 465
Bme18I GGWCC 2 cut(s) 970, 1275
BmeRI GACNNNNNGTC 1 cut(s) 958
BmgT120I GGNCC 5 cut(s) 707, 970, 1128, 1129, 1275
BmiI GGNNCC 5 cut(s) 48, 709, 972, 981, 1130
BmrFI CCNGG 2 cut(s) 57, 465
BmrI ACTGGG 1 cut(s) 666
BmsI GCATC 2 cut(s) 780, 1417
BmuI ACTGGG 1 cut(s) 666
Bpu10I CCTNAGC 2 cut(s) 110, 1173
Bpu14I TTCGAA 2 cut(s) 766, 1148
BpuEI CTTGAG 2 cut(s) 246, 602
BsaHI GRCGYC 1 cut(s) 303
BsaI GGTCTC 1 cut(s) 966
BsaJI CCNNGG 2 cut(s) 295, 469
BsaWI WCCGGW 2 cut(s) 976, 1277
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 242, 470
Bse1I ACTGG 1 cut(s) 661
Bse21I CCTNAGG 1 cut(s) 806
Bse3DI GCAATG 2 cut(s) 438, 443
BseBI CCWGG 2 cut(s) 57, 465
BseDI CCNNGG 2 cut(s) 295, 469
BseGI GGATG 3 cut(s) 391, 709, 1238
BseLI CCNNNNNNNGG 3 cut(s) 56, 242, 470
BseMI GCAATG 2 cut(s) 438, 443
BseMII CTCAG 5 cut(s) 315, 774, 797, 1164, 1181
BseNI ACTGG 1 cut(s) 661
BseSI GKGCMC 1 cut(s) 1132
BseXI GCAGC 4 cut(s) 319, 446, 570, 625
BshFI GGCC 5 cut(s) 259, 468, 708, 1130, 1243
BshNI GGYRCC 1 cut(s) 979
BsiSI CCGG 3 cut(s) 243, 977, 1278
BslFI GGGAC 2 cut(s) 61, 1406
BslI CCNNNNNNNGG 3 cut(s) 56, 242, 470
BsmAI GTCTC 4 cut(s) 423, 966, 1170, 1297
BsmBI CGTCTC 1 cut(s) 423
BsmFI GGGAC 2 cut(s) 61, 1406
BsnI GGCC 5 cut(s) 259, 468, 708, 1130, 1243
Bso31I GGTCTC 1 cut(s) 966
Bsp119I TTCGAA 2 cut(s) 766, 1148
Bsp120I GGGCCC 1 cut(s) 1128
Bsp1286I GDGCHC 2 cut(s) 550, 1132
Bsp143I GATC 4 cut(s) 67, 590, 649, 835
BspACI CCGC 3 cut(s) 330, 1028, 1070
BspANI GGCC 5 cut(s) 259, 468, 708, 1130, 1243
BspCNI CTCAG 5 cut(s) 316, 773, 798, 1165, 1180
BspHI TCATGA 1 cut(s) 421
BspLI GGNNCC 5 cut(s) 48, 709, 972, 981, 1130
BspMAI CTGCAG 1 cut(s) 436
BspPI GGATC 3 cut(s) 598, 644, 830
BspT104I TTCGAA 2 cut(s) 766, 1148
BspT107I GGYRCC 1 cut(s) 979
BspTNI GGTCTC 1 cut(s) 966
BsrDI GCAATG 2 cut(s) 438, 443
BsrI ACTGG 1 cut(s) 661
BssECI CCNNGG 2 cut(s) 295, 469
BssMI GATC 4 cut(s) 67, 590, 649, 835
BssNI GRCGYC 1 cut(s) 303
BssSI CACGAG 1 cut(s) 1133
BssT1I CCWWGG 1 cut(s) 295
Bst2BI CACGAG 1 cut(s) 1133
Bst2UI CCWGG 2 cut(s) 57, 465
Bst4CI ACNGT 3 cut(s) 319, 640, 956
BstACI GRCGYC 1 cut(s) 303
BstAPI GCANNNNNTGC 1 cut(s) 440
BstBI TTCGAA 2 cut(s) 766, 1148
BstC8I GCNNGC 1 cut(s) 556
BstDEI CTNAG 6 cut(s) 110, 324, 760, 806, 1167, 1173
BstDSI CCRYGG 1 cut(s) 469
BstF5I GGATG 3 cut(s) 391, 709, 1238
BstHHI GCGC 2 cut(s) 7, 62
BstKTI GATC 4 cut(s) 70, 593, 652, 838
BstMAI GTCTC 4 cut(s) 423, 966, 1170, 1297
BstMBI GATC 4 cut(s) 67, 590, 649, 835
BstMWI GCNNNNNNNGC 4 cut(s) 329, 440, 619, 1076
BstNI CCWGG 2 cut(s) 57, 465
BstNSI RCATGY 1 cut(s) 558
BstSCI CCNGG 2 cut(s) 55, 463
BstSFI CTRYAG 4 cut(s) 180, 432, 955, 1266
BstSLI GKGCMC 1 cut(s) 1132
BstV1I GCAGC 4 cut(s) 319, 446, 570, 625
BstX2I RGATCY 1 cut(s) 67
BstYI RGATCY 1 cut(s) 67
Bsu36I CCTNAGG 1 cut(s) 806
BsuRI GGCC 5 cut(s) 259, 468, 708, 1130, 1243
BtgI CCRYGG 1 cut(s) 469
BtsCI GGATG 3 cut(s) 391, 709, 1238
BtsIMutI CAGTG 1 cut(s) 83
Cac8I GCNNGC 1 cut(s) 556
CaiI CAGNNNCTG 1 cut(s) 323
CciI TCATGA 1 cut(s) 421
CfoI GCGC 2 cut(s) 7, 62
Cfr13I GGNCC 5 cut(s) 707, 970, 1128, 1129, 1275
CseI GACGC 1 cut(s) 311
Csp6I GTAC 7 cut(s) 125, 171, 185, 233, 818, 842, 980
CspCI CAANNNNNGTGG 2 cut(s) 1291, 1326
CviAII CATG 5 cut(s) 422, 493, 500, 551, 555
CviQI GTAC 7 cut(s) 125, 171, 185, 233, 818, 842, 980
DdeI CTNAG 6 cut(s) 110, 324, 760, 806, 1167, 1173
DpnI GATC 4 cut(s) 69, 592, 651, 837
DpnII GATC 4 cut(s) 67, 590, 649, 835
DriI GACNNNNNGTC 1 cut(s) 958
EaeI YGGCCR 1 cut(s) 466
Eam1105I GACNNNNNGTC 1 cut(s) 958
Eco130I CCWWGG 1 cut(s) 295
Eco24I GRGCYC 2 cut(s) 550, 1132
Eco31I GGTCTC 1 cut(s) 966
Eco47I GGWCC 2 cut(s) 970, 1275
Eco81I CCTNAGG 1 cut(s) 806
EcoO109I RGGNCCY 1 cut(s) 1128
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 55, 463
EcoT14I CCWWGG 1 cut(s) 295
EcoT22I ATGCAT 1 cut(s) 556
EcoT38I GRGCYC 2 cut(s) 550, 1132
ErhI CCWWGG 1 cut(s) 295
Esp3I CGTCTC 1 cut(s) 423
FaeI CATG 5 cut(s) 425, 496, 503, 554, 558
FaqI GGGAC 2 cut(s) 61, 1406
FatI CATG 5 cut(s) 421, 492, 499, 550, 554
Fnu4HI GCNGC 4 cut(s) 333, 435, 559, 614
FokI GGATG 3 cut(s) 378, 716, 1245
FriOI GRGCYC 2 cut(s) 550, 1132
Fsp4HI GCNGC 4 cut(s) 333, 435, 559, 614
FspBI CTAG 3 cut(s) 168, 821, 869
GlaI GCGC 2 cut(s) 6, 61
GluI GCNGC 4 cut(s) 333, 435, 559, 614
HaeIII GGCC 5 cut(s) 259, 468, 708, 1130, 1243
HapII CCGG 3 cut(s) 243, 977, 1278
HgaI GACGC 1 cut(s) 311
HhaI GCGC 2 cut(s) 7, 62
Hin1I GRCGYC 1 cut(s) 303
Hin1II CATG 5 cut(s) 425, 496, 503, 554, 558
Hin6I GCGC 2 cut(s) 5, 60
HinP1I GCGC 2 cut(s) 5, 60
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HindIII AAGCTT 2 cut(s) 384, 1359
HpaII CCGG 3 cut(s) 243, 977, 1278
HphI GGTGA 2 cut(s) 31, 1061
Hpy166II GTNNAC 4 cut(s) 783, 858, 952, 1141
Hpy188I TCNGA 5 cut(s) 595, 654, 835, 1212, 1297
Hpy188III TCNNGA 3 cut(s) 263, 374, 422
Hpy8I GTNNAC 4 cut(s) 783, 858, 952, 1141
Hpy99I CGWCG 1 cut(s) 305
HpyAV CCTTC 2 cut(s) 89, 1376
HpyCH4III ACNGT 3 cut(s) 319, 640, 956
HpyCH4IV ACGT 2 cut(s) 366, 860
HpyCH4V TGCA 8 cut(s) 39, 434, 443, 448, 496, 503, 554, 558
HpyF10VI GCNNNNNNNGC 4 cut(s) 329, 440, 619, 1076
HpyF3I CTNAG 6 cut(s) 110, 324, 760, 806, 1167, 1173
HpySE526I ACGT 2 cut(s) 366, 860
Hsp92I GRCGYC 1 cut(s) 303
Hsp92II CATG 5 cut(s) 425, 496, 503, 554, 558
HspAI GCGC 2 cut(s) 5, 60
KpnI GGTACC 1 cut(s) 983
Kzo9I GATC 4 cut(s) 67, 590, 649, 835
LmnI GCTCC 3 cut(s) 52, 751, 1280
Lsp1109I GCAGC 4 cut(s) 319, 446, 570, 625
LweI GCATC 2 cut(s) 780, 1417
MaeI CTAG 3 cut(s) 168, 821, 869
MaeII ACGT 2 cut(s) 366, 860
MaeIII GTNAC 2 cut(s) 603, 1072
MalI GATC 4 cut(s) 69, 592, 651, 837
MboI GATC 4 cut(s) 67, 590, 649, 835
MboII GAAGA 4 cut(s) 147, 150, 839, 1064
MfeI CAATTG 2 cut(s) 407, 688
MflI RGATCY 1 cut(s) 67
MhlI GDGCHC 2 cut(s) 550, 1132
MluCI AATT 9 cut(s) 146, 340, 407, 688, 737, 828, 988, 1000, 1080
MlyI GAGTC 8 cut(s) 92, 260, 335, 422, 660, 752, 1388, 1422
MmeI TCCRAC 1 cut(s) 677
Mph1103I ATGCAT 1 cut(s) 556
MroXI GAANNNNTTC 2 cut(s) 530, 1183
MseI TTAA 3 cut(s) 149, 537, 683
MspA1I CMGCKG 1 cut(s) 332
MspI CCGG 3 cut(s) 243, 977, 1278
MspR9I CCNGG 2 cut(s) 57, 465
MunI CAATTG 2 cut(s) 407, 688
MvaI CCWGG 2 cut(s) 57, 465
MwoI GCNNNNNNNGC 4 cut(s) 329, 440, 619, 1076
NdeII GATC 4 cut(s) 67, 590, 649, 835
NlaIII CATG 5 cut(s) 425, 496, 503, 554, 558
NlaIV GGNNCC 5 cut(s) 48, 709, 972, 981, 1130
NmuCI GTSAC 1 cut(s) 1072
NsiI ATGCAT 1 cut(s) 556
NspI RCATGY 1 cut(s) 558
NspV TTCGAA 2 cut(s) 766, 1148
PaeI GCATGC 1 cut(s) 558
PagI TCATGA 1 cut(s) 421
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PdmI GAANNNNTTC 2 cut(s) 530, 1183
PfeI GAWTC 4 cut(s) 176, 377, 671, 1298
PkrI GCNGC 4 cut(s) 334, 436, 560, 615
PleI GAGTC 8 cut(s) 92, 260, 334, 421, 660, 752, 1388, 1421
PpsI GAGTC 8 cut(s) 92, 260, 334, 421, 660, 752, 1388, 1421
Psp1406I AACGTT 1 cut(s) 860
Psp6I CCWGG 2 cut(s) 55, 463
PspGI CCWGG 2 cut(s) 55, 463
PspN4I GGNNCC 5 cut(s) 48, 709, 972, 981, 1130
PspOMI GGGCCC 1 cut(s) 1128
PspPI GGNCC 5 cut(s) 707, 970, 1128, 1129, 1275
PstI CTGCAG 1 cut(s) 436
PstNI CAGNNNCTG 1 cut(s) 323
PsuI RGATCY 1 cut(s) 67
RsaI GTAC 7 cut(s) 126, 172, 186, 234, 819, 843, 981
RsaNI GTAC 7 cut(s) 125, 171, 185, 233, 818, 842, 980
SaqAI TTAA 3 cut(s) 149, 537, 683
SatI GCNGC 4 cut(s) 333, 435, 559, 614
Sau3AI GATC 4 cut(s) 67, 590, 649, 835
Sau96I GGNCC 5 cut(s) 707, 970, 1128, 1129, 1275
ScaI AGTACT 2 cut(s) 172, 186
SchI GAGTC 8 cut(s) 92, 260, 335, 422, 660, 752, 1388, 1422
ScrFI CCNGG 2 cut(s) 57, 465
SduI GDGCHC 2 cut(s) 550, 1132
SfaNI GCATC 2 cut(s) 780, 1417
SfcI CTRYAG 4 cut(s) 180, 432, 955, 1266
SfuI TTCGAA 2 cut(s) 766, 1148
SinI GGWCC 2 cut(s) 970, 1275
SmlI CTYRAG 2 cut(s) 261, 617
SmoI CTYRAG 2 cut(s) 261, 617
SpeI ACTAGT 1 cut(s) 167
SphI GCATGC 1 cut(s) 558
Sse9I AATT 9 cut(s) 146, 340, 407, 688, 737, 828, 988, 1000, 1080
SsiI CCGC 3 cut(s) 330, 1028, 1070
SspMI CTAG 3 cut(s) 168, 821, 869
StyD4I CCNGG 2 cut(s) 55, 463
StyI CCWWGG 1 cut(s) 295
TaaI ACNGT 3 cut(s) 319, 640, 956
TaiI ACGT 2 cut(s) 369, 863
TaqI TCGA 8 cut(s) 345, 356, 375, 510, 669, 766, 1148, 1411
TasI AATT 9 cut(s) 146, 340, 407, 688, 737, 828, 988, 1000, 1080
TatI WGTACW 2 cut(s) 170, 184
TfiI GAWTC 4 cut(s) 176, 377, 671, 1298
Tru1I TTAA 3 cut(s) 149, 537, 683
Tru9I TTAA 3 cut(s) 149, 537, 683
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 1 cut(s) 1072
TseI GCWGC 4 cut(s) 332, 434, 558, 613
Tsp45I GTSAC 1 cut(s) 1072
TspDTI ATGAA 4 cut(s) 159, 438, 539, 839
TspRI CASTG 1 cut(s) 90
VpaK11BI GGWCC 2 cut(s) 970, 1275
XapI RAATTY 2 cut(s) 737, 828
XceI RCATGY 1 cut(s) 558
XmnI GAANNNNTTC 2 cut(s) 530, 1183
XspI CTAG 3 cut(s) 168, 821, 869
ZrmI AGTACT 2 cut(s) 172, 186
Zsp2I ATGCAT 1 cut(s) 556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.