Rroxscaffold_5G00336350

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000417
Physical Location & Seq
Reverse (-)
4157394 .. 4160005
2612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00336350.1

Sequence Viewer

Length: 1425 bp
ATGGCTGCAAATCACAGAAGTGGTGGAGATCAAACAGTTATTGATATTGGCGATGACCGCAAAAAAAGCAAGAAATGCAAGAAATGCATCTTCAGAGTTCCTAAGGTTCTCCGGAGACAAAACCCAGAAGCATATACATCTGATGTTGTTTCTGTCGGACCTTTTCATTTTCGAGGGAAGCGAGGCAAGGAGGAAGCAGGTAAAGAAGACAAGGAAGTCAAAGAAGGTAAGGAAGAAAAAGAAGGCAAGGAAGGCAAAGAAGGCAAAGGCGAGGAAGATTTCCAACTCATGGAACGAGTGAAAGAGAGCTATGTGAAAGAAATTCTCTCAGATATGAAGAATATAACTTTGAAAGAGTTGACCGCAGAAGTCATTAAGCTCTCAGATCAAAAGATTGAAGGCGGGTTTGAGCAACGCGCGCGTGATTTTTATGCAGAACCACTTGGTCATATTTCCTCTGAAGACTTCATCGAGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGCGTAACGATCCGAATCTCAGGGCCTTTGATGACCCAGTATTCAATATGGATTGCATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAGAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGACCTTATATACCCTGATGCCGCTTCCCTCTCTATTCGCATCATGAAAGCGCTCAGCATACTACCATCACTGAAGCAAAGTTGCTCATCTTATAATAAGCATCTCCGCACACACAAGCATCATTCTGATGTTGATTATCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAAGAACCATAGAAGAGAGAGCGAATAAAGTAACTGGGAACCCTGAAGAACATAATGAAGTGCATTCTGGGAACAAAGACAATAAAGTTGTTCATGCTATCTTTGACCCAGATCTACATCAAATTCGTACCGCAACCGCACTTTCAAAGGCAGACATTAAATTCCAACCCGTCATAAAGGAGAGCATAATGGACATCCGATTTGAAGAAGGCGGGTGTTGCAGGAATGGGATTCTTAAGATTCCGCAGCTAAACGTTGGAATGTCATCGGAAACATTATTCAGGAATCTCATTGCAATCGAGCAATGCTACCATGGTTATTCGAATGAAATTACATCCTATGCCATCTTGATGGATAACCTTATTTCTTCCAAGGAAGATATGGAATTACTTTGCAAGGAAAATGTAATAGGTAACTGGCTGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAACCTTTACAAGGACATCCCGCACAACAAATTCTACTATGGTGCTCTCTGCACGCAGGTGAATGATCGTTACAAACTGAGGCGGACTCGGCATCCACGTCGACAGCATGTCGACAGGCTCTCGACAGCATTAACTATTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

474

Amino Acids

54.62

Weight (kDa)

6.69

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 30 - 469 5.3e-85 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 741
AarI CACCTGC 1 cut(s) 1327
AasI GACNNNNNNGTC 1 cut(s) 215
Acc36I ACCTGC 2 cut(s) 188, 1327
AccB7I CCANNNNNTGG 1 cut(s) 289
AccI GTMKAC 2 cut(s) 1381, 1392
AccII CGCG 3 cut(s) 417, 419, 421
AccIII TCCGGA 1 cut(s) 111
AclI AACGTT 1 cut(s) 1083
AclWI GGATC 1 cut(s) 521
AcsI RAATTY 4 cut(s) 321, 951, 989, 1310
AcuI CTGAAG 5 cut(s) 76, 480, 740, 894, 1261
AfaI GTAC 1 cut(s) 958
AfeI AGCGCT 1 cut(s) 699
AfiI CCNNNNNNNGG 2 cut(s) 289, 1291
AflII CTTAAG 1 cut(s) 1064
AgsI TTSAA 6 cut(s) 352, 398, 506, 562, 975, 1034
AhdI GACNNNNNGTC 1 cut(s) 1388
AjiI CACGTC 1 cut(s) 1379
AleI CACNNNNGTG 2 cut(s) 18, 1337
AluBI AGCT 4 cut(s) 309, 379, 812, 1078
AluI AGCT 4 cut(s) 309, 379, 812, 1078
Alw21I GWGCWC 1 cut(s) 1327
Alw26I GTCTC 1 cut(s) 109
AlwI GGATC 1 cut(s) 521
Aor13HI TCCGGA 1 cut(s) 111
Aor51HI AGCGCT 1 cut(s) 699
AoxI GGCC 1 cut(s) 540
ApeKI GCWGC 2 cut(s) 5, 1075
ApoI RAATTY 4 cut(s) 321, 951, 989, 1310
ArsI GACNNNNNNTTYG 2 cut(s) 1013, 1045
AspLEI GCGC 3 cut(s) 419, 421, 700
AspS9I GGNCC 2 cut(s) 158, 540
AsuHPI GGTGA 1 cut(s) 1351
AsuII TTCGAA 1 cut(s) 1151
AvaII GGWCC 1 cut(s) 158
AxyI CCTNAGG 1 cut(s) 102
BbsI GAAGAC 2 cut(s) 213, 468
Bbv12I GWGCWC 1 cut(s) 1327
BbvI GCAGC 1 cut(s) 1087
BccI CCATC 4 cut(s) 721, 1174, 1181, 1256
BcgI CGANNNNNNTGC 2 cut(s) 1361, 1395
BcoDI GTCTC 1 cut(s) 109
BfaI CTAG 1 cut(s) 608
BfoI RGCGCY 1 cut(s) 701
BfrI CTTAAG 1 cut(s) 1064
BfuAI ACCTGC 2 cut(s) 188, 1327
BglII AGATCT 1 cut(s) 940
BisI GCNGC 3 cut(s) 6, 669, 1076
BlpI GCTNAGC 1 cut(s) 701
BlsI GCNGC 3 cut(s) 7, 670, 1077
Bme18I GGWCC 1 cut(s) 158
BmeRI GACNNNNNGTC 1 cut(s) 1388
BmgBI CACGTC 1 cut(s) 1379
BmgT120I GGNCC 2 cut(s) 158, 540
BmiI GGNNCC 1 cut(s) 869
BmrI ACTGGG 2 cut(s) 548, 873
BmsI GCATC 6 cut(s) 96, 655, 696, 757, 775, 1381
BmuI ACTGGG 2 cut(s) 548, 873
BpiI GAAGAC 2 cut(s) 213, 468
BplI GAGNNNNNCTC 2 cut(s) 1351, 1383
Bpu1102I GCTNAGC 1 cut(s) 701
Bpu14I TTCGAA 1 cut(s) 1151
BsaBI GATNNNNATC 2 cut(s) 531, 945
BsaJI CCNNGG 3 cut(s) 623, 1141, 1200
BsaWI WCCGGW 1 cut(s) 111
Bsc4I CCNNNNNNNGG 2 cut(s) 289, 1291
Bse1I ACTGG 3 cut(s) 554, 868, 1250
Bse21I CCTNAGG 1 cut(s) 102
Bse3DI GCAATG 2 cut(s) 1119, 1139
Bse8I GATNNNNATC 2 cut(s) 531, 945
BseAI TCCGGA 1 cut(s) 111
BseDI CCNNGG 3 cut(s) 623, 1141, 1200
BseGI GGATG 4 cut(s) 1023, 1163, 1296, 1372
BseJI GATNNNNATC 2 cut(s) 531, 945
BseLI CCNNNNNNNGG 2 cut(s) 289, 1291
BseMI GCAATG 2 cut(s) 1119, 1139
BseMII CTCAG 6 cut(s) 342, 396, 550, 715, 1241, 1349
BseNI ACTGG 3 cut(s) 554, 868, 1250
BsePI GCGCGC 1 cut(s) 417
BseXI GCAGC 1 cut(s) 1087
BsgI GTGCAG 2 cut(s) 773, 1315
Bsh1236I CGCG 3 cut(s) 417, 419, 421
BshFI GGCC 1 cut(s) 542
BsiHKAI GWGCWC 1 cut(s) 1327
BsiSI CCGG 1 cut(s) 112
BslI CCNNNNNNNGG 2 cut(s) 289, 1291
BsmAI GTCTC 1 cut(s) 109
BsmI GAATGC 1 cut(s) 892
BsnI GGCC 1 cut(s) 542
Bsp119I TTCGAA 1 cut(s) 1151
Bsp1286I GDGCHC 1 cut(s) 1327
Bsp13I TCCGGA 1 cut(s) 111
Bsp143I GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
Bsp1720I GCTNAGC 1 cut(s) 701
Bsp19I CCATGG 1 cut(s) 1141
BspANI GGCC 1 cut(s) 542
BspCNI CTCAG 6 cut(s) 341, 395, 549, 714, 1242, 1350
BspEI TCCGGA 1 cut(s) 111
BspFNI CGCG 3 cut(s) 417, 419, 421
BspHI TCATGA 1 cut(s) 690
BspLI GGNNCC 1 cut(s) 869
BspMI ACCTGC 2 cut(s) 188, 1327
BspPI GGATC 1 cut(s) 521
BspT104I TTCGAA 1 cut(s) 1151
BspTI CTTAAG 1 cut(s) 1064
BsrDI GCAATG 2 cut(s) 1119, 1139
BsrI ACTGG 3 cut(s) 554, 868, 1250
BssECI CCNNGG 3 cut(s) 623, 1141, 1200
BssHII GCGCGC 1 cut(s) 417
BssMI GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
BssT1I CCWWGG 3 cut(s) 623, 1141, 1200
Bst4CI ACNGT 3 cut(s) 37, 491, 510
Bst6I CTCTTC 1 cut(s) 837
BstAFI CTTAAG 1 cut(s) 1064
BstAPI GCANNNNNTGC 2 cut(s) 75, 84
BstBI TTCGAA 1 cut(s) 1151
BstC8I GCNNGC 2 cut(s) 419, 1334
BstDEI CTNAG 7 cut(s) 102, 328, 382, 536, 701, 1250, 1358
BstDSI CCRYGG 1 cut(s) 1141
BstENI CCTNNNNNAGG 1 cut(s) 1289
BstF5I GGATG 4 cut(s) 1023, 1163, 1296, 1372
BstFNI CGCG 3 cut(s) 417, 419, 421
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 3 cut(s) 419, 421, 700
BstKTI GATC 6 cut(s) 31, 388, 529, 802, 943, 1348
BstMAI GTCTC 1 cut(s) 109
BstMBI GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
BstMWI GCNNNNNNNGC 9 cut(s) 57, 66, 75, 84, 252, 261, 418, 1047, 1369
BstNSI RCATGY 2 cut(s) 577, 1391
BstUI CGCG 3 cut(s) 417, 419, 421
BstV1I GCAGC 1 cut(s) 1087
BstV2I GAAGAC 2 cut(s) 213, 468
BstX2I RGATCY 1 cut(s) 940
BstXI CCANNNNNNTGG 1 cut(s) 1180
BstYI RGATCY 1 cut(s) 940
Bsu36I CCTNAGG 1 cut(s) 102
BsuRI GGCC 1 cut(s) 542
BtgI CCRYGG 1 cut(s) 1141
BtgZI GCGATG 1 cut(s) 66
BtrI CACGTC 1 cut(s) 1379
BtsCI GGATG 4 cut(s) 1023, 1163, 1296, 1372
BtsIMutI CAGTG 1 cut(s) 716
BveI ACCTGC 2 cut(s) 188, 1327
Cac8I GCNNGC 2 cut(s) 419, 1334
CciI TCATGA 1 cut(s) 690
CfoI GCGC 3 cut(s) 419, 421, 700
Cfr13I GGNCC 2 cut(s) 158, 540
Csp6I GTAC 1 cut(s) 957
CviAII CATG 7 cut(s) 289, 574, 593, 691, 923, 1142, 1388
CviJI RGCY 8 cut(s) 5, 309, 379, 542, 812, 1078, 1249, 1399
CviKI_1 RGCY 8 cut(s) 5, 309, 379, 542, 812, 1078, 1249, 1399
CviQI GTAC 1 cut(s) 957
DdeI CTNAG 7 cut(s) 102, 328, 382, 536, 701, 1250, 1358
DpnI GATC 6 cut(s) 30, 387, 528, 801, 942, 1347
DpnII GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
DrdI GACNNNNNNGTC 1 cut(s) 215
DriI GACNNNNNGTC 1 cut(s) 1388
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 837
Eam1105I GACNNNNNGTC 1 cut(s) 1388
EarI CTCTTC 1 cut(s) 837
EciI GGCGGA 1 cut(s) 1378
Eco130I CCWWGG 3 cut(s) 623, 1141, 1200
Eco47I GGWCC 1 cut(s) 158
Eco47III AGCGCT 1 cut(s) 699
Eco57I CTGAAG 5 cut(s) 76, 480, 740, 894, 1261
Eco81I CCTNAGG 1 cut(s) 102
EcoNI CCTNNNNNAGG 1 cut(s) 1289
EcoO109I RGGNCCY 1 cut(s) 540
EcoT14I CCWWGG 3 cut(s) 623, 1141, 1200
EcoT22I ATGCAT 1 cut(s) 89
ErhI CCWWGG 3 cut(s) 623, 1141, 1200
FaeI CATG 7 cut(s) 292, 577, 596, 694, 926, 1145, 1391
FatI CATG 7 cut(s) 288, 573, 592, 690, 922, 1141, 1387
FauI CCCGC 3 cut(s) 395, 1034, 1308
FblI GTMKAC 2 cut(s) 1381, 1392
Fnu4HI GCNGC 3 cut(s) 6, 669, 1076
FokI GGATG 4 cut(s) 1010, 1150, 1283, 1359
Fsp4HI GCNGC 3 cut(s) 6, 669, 1076
FspBI CTAG 1 cut(s) 608
GlaI GCGC 3 cut(s) 418, 420, 699
GluI GCNGC 3 cut(s) 6, 669, 1076
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 1 cut(s) 542
HapII CCGG 1 cut(s) 112
HhaI GCGC 3 cut(s) 419, 421, 700
Hin1II CATG 7 cut(s) 292, 577, 596, 694, 926, 1145, 1391
Hin6I GCGC 3 cut(s) 417, 419, 698
HinP1I GCGC 3 cut(s) 417, 419, 698
HincII GTYRAC 4 cut(s) 360, 487, 1382, 1393
HindII GTYRAC 4 cut(s) 360, 487, 1382, 1393
HinfI GANTC 6 cut(s) 532, 613, 1060, 1069, 1114, 1366
HpaII CCGG 1 cut(s) 112
HphI GGTGA 1 cut(s) 1351
Hpy166II GTNNAC 4 cut(s) 360, 487, 1382, 1393
Hpy188III TCNNGA 6 cut(s) 112, 472, 691, 1111, 1177, 1402
Hpy8I GTNNAC 4 cut(s) 360, 487, 1382, 1393
Hpy99I CGWCG 1 cut(s) 1383
HpyAV CCTTC 6 cut(s) 218, 236, 245, 254, 392, 1031
HpyCH4III ACNGT 3 cut(s) 37, 491, 510
HpyCH4IV ACGT 2 cut(s) 1083, 1378
HpyF10VI GCNNNNNNNGC 9 cut(s) 57, 66, 75, 84, 252, 261, 418, 1047, 1369
HpyF3I CTNAG 7 cut(s) 102, 328, 382, 536, 701, 1250, 1358
HpySE526I ACGT 2 cut(s) 1083, 1378
Hsp92II CATG 7 cut(s) 292, 577, 596, 694, 926, 1145, 1391
HspAI GCGC 3 cut(s) 417, 419, 698
Kpn2I TCCGGA 1 cut(s) 111
Kzo9I GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
LmnI GCTCC 1 cut(s) 609
Lsp1109I GCAGC 1 cut(s) 1087
LweI GCATC 6 cut(s) 96, 655, 696, 757, 775, 1381
MaeI CTAG 1 cut(s) 608
MaeII ACGT 2 cut(s) 1083, 1378
MaeIII GTNAC 4 cut(s) 521, 859, 1241, 1349
MalI GATC 6 cut(s) 30, 387, 528, 801, 942, 1347
MauBI CGCGCGCG 1 cut(s) 417
MboI GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
MflI RGATCY 1 cut(s) 940
MhlI GDGCHC 1 cut(s) 1327
MluCI AATT 7 cut(s) 321, 501, 951, 989, 1158, 1214, 1310
MlyI GAGTC 1 cut(s) 1360
MmeI TCCRAC 4 cut(s) 136, 307, 1018, 1066
MnlI CCTC 7 cut(s) 167, 176, 184, 265, 466, 686, 1353
Mph1103I ATGCAT 1 cut(s) 89
MroI TCCGGA 1 cut(s) 111
MseI TTAA 5 cut(s) 375, 830, 987, 1065, 1412
MslI CAYNNNNRTG 5 cut(s) 18, 473, 774, 1178, 1337
MspCI CTTAAG 1 cut(s) 1064
MspI CCGG 1 cut(s) 112
Mva1269I GAATGC 1 cut(s) 892
MvnI CGCG 3 cut(s) 417, 419, 421
MwoI GCNNNNNNNGC 9 cut(s) 57, 66, 75, 84, 252, 261, 418, 1047, 1369
NcoI CCATGG 1 cut(s) 1141
NdeII GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
NlaIII CATG 7 cut(s) 292, 577, 596, 694, 926, 1145, 1391
NlaIV GGNNCC 1 cut(s) 869
NmeAIII GCCGAG 1 cut(s) 1348
NsiI ATGCAT 1 cut(s) 89
NspI RCATGY 2 cut(s) 577, 1391
NspV TTCGAA 1 cut(s) 1151
OliI CACNNNNGTG 2 cut(s) 18, 1337
PagI TCATGA 1 cut(s) 690
PaqCI CACCTGC 1 cut(s) 1327
PauI GCGCGC 1 cut(s) 417
PcsI WCGNNNNNNNCGW 2 cut(s) 178, 1375
PctI GAATGC 1 cut(s) 892
PfeI GAWTC 5 cut(s) 532, 613, 1060, 1069, 1114
PflMI CCANNNNNTGG 1 cut(s) 289
PkrI GCNGC 3 cut(s) 7, 670, 1077
PleI GAGTC 1 cut(s) 1360
PpsI GAGTC 1 cut(s) 1360
PsiI TTATAA 1 cut(s) 741
Psp1406I AACGTT 1 cut(s) 1083
PspN4I GGNNCC 1 cut(s) 869
PspPI GGNCC 2 cut(s) 158, 540
PsuI RGATCY 1 cut(s) 940
PteI GCGCGC 1 cut(s) 417
RsaI GTAC 1 cut(s) 958
RsaNI GTAC 1 cut(s) 957
RseI CAYNNNNRTG 5 cut(s) 18, 473, 774, 1178, 1337
SalI GTCGAC 2 cut(s) 1380, 1391
SaqAI TTAA 5 cut(s) 375, 830, 987, 1065, 1412
SatI GCNGC 3 cut(s) 6, 669, 1076
Sau3AI GATC 6 cut(s) 28, 385, 526, 799, 940, 1345
Sau96I GGNCC 2 cut(s) 158, 540
SchI GAGTC 1 cut(s) 1360
SduI GDGCHC 1 cut(s) 1327
SfaNI GCATC 6 cut(s) 96, 655, 696, 757, 775, 1381
SfuI TTCGAA 1 cut(s) 1151
SinI GGWCC 1 cut(s) 158
SmiMI CAYNNNNRTG 5 cut(s) 18, 473, 774, 1178, 1337
SmlI CTYRAG 1 cut(s) 1064
SmoI CTYRAG 1 cut(s) 1064
Sse9I AATT 7 cut(s) 321, 501, 951, 989, 1158, 1214, 1310
SspMI CTAG 1 cut(s) 608
StyI CCWWGG 3 cut(s) 623, 1141, 1200
TaaI ACNGT 3 cut(s) 37, 491, 510
TaiI ACGT 2 cut(s) 1086, 1381
TaqI TCGA 7 cut(s) 172, 471, 1128, 1151, 1381, 1392, 1403
TasI AATT 7 cut(s) 321, 501, 951, 989, 1158, 1214, 1310
TauI GCSGC 1 cut(s) 671
TfiI GAWTC 5 cut(s) 532, 613, 1060, 1069, 1114
Tru1I TTAA 5 cut(s) 375, 830, 987, 1065, 1412
Tru9I TTAA 5 cut(s) 375, 830, 987, 1065, 1412
TscAI CASTG 1 cut(s) 723
TseI GCWGC 2 cut(s) 5, 1075
TspDTI ATGAA 9 cut(s) 155, 350, 457, 569, 707, 900, 911, 1170, 1272
TspRI CASTG 1 cut(s) 723
Van91I CCANNNNNTGG 1 cut(s) 289
Vha464I CTTAAG 1 cut(s) 1064
VpaK11BI GGWCC 1 cut(s) 158
XagI CCTNNNNNAGG 1 cut(s) 1289
XapI RAATTY 4 cut(s) 321, 951, 989, 1310
XceI RCATGY 2 cut(s) 577, 1391
XcmI CCANNNNNNNNNTGG 1 cut(s) 1207
XmiI GTMKAC 2 cut(s) 1381, 1392
XspI CTAG 1 cut(s) 608
Zsp2I ATGCAT 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.