RchiOBHm_Chr4g0390771

UPF0481 protein At3g47200-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000417
Physical Location & Seq
Reverse (-)
6023961 .. 6025929
1969 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36372

Sequence Viewer

Length: 1506 bp
ATGTCTGCAAATCGTAAAACTGGTAGAGATCATACAGTTATTGATATTATCGATGACCGCGAGAAAAGCAAGAAATGCATCTTCAGACTTCCTAACGTGCTCCGGAGACAAAACCCAGAAGCATATACACCTGACGTTGTTTCAATCGGACCTTTTCATCATTATCCAGAAAAGCGAGGCAAGGAGGAAGGTAAAGGAGTCGAGGAAGGCAAACAAGGCATAGGCGACGCAGATTTCCAACTTACGAAACGAATGAAAACTCGCTATTTGAATGAAATTCTCACACGTATGAAGATAACTTTGGAAGAGTTGACCGCAAAAGTTTCTGAGCTCTCAGATCAGAAGAATGAAGGTGGCTTTGAGGAACAAGCCCGCAATTTTTATGCAGAACCATGTGATCATATTTCTTCCAAGGAGTTCATCGAGATGATGATAGTTGACGGTTGCTTCCTAATTCAACTGTTTCGGAAGTGTGACCATTCGAAATTCAGGGCCTCTGATGACCCGGTGTTCGACATGGACTGTATGTTTCATTTCCTATGCCATGACATTTTGCTCCTAGAAAATCAACTACCTTGGTTTGTTATCCACATTTTGTATGACCTTACCCATGATATATACCCTGATGAAGATTCCCTCTCTTTTCTCGTCCTTAAAGCCTTCAGCAAGCTGCCATCACTAAAGCAAGGTTGCTCATCTTATAATAAGCATCTCCGAAACAATTGTAATTTTGCTGCTGATTATCTGCACATACTTGATCTGGTAAGAGCTTCCATAGTTATTCCATTAAGGACCATACAAGAGAGAGCGCATAAAGCAGCTGGAAAAGAATCCATGGCCTACCCTGAAGAACATGAAGTTGACTCTGGGAACAAACACAAGGGAAACAATGAAGTCGTTCATGAAGCTATCATTGACCCAGATCTACATCAAATTCGTACCGCAACTGCTCTCTCAAACGTAGGCATTAAATTCAAAAGCGTCGAAAGGGATAGCATAATGGACATCCGATTCGGAAGGAGCCGCGGGTGTTTTGGGCATGCTATTCTTATGATTCCACAGTTAAACATTGATCTGTTATCAGAACCATTATTCAGGAACCTCATTGCAATTGAGCAATGCTACCATGGTTATTCAAACGAGATAACATCTTATGCCATCTTTATGGATAATCTCATCTGTTCAGAGGAAGATATGGATTTACTTCGCAAGGAAAAAGTAATAGGTAATTGGATGAGTGATGAAGATGGTTGTAAGTTCTTCAGCAACCTTTACAAGGGTATCCGGCACAACAGCTTCTACTATGTTGAACTGTGCAGACAATTGAATTGTGTTTACAGATTGAAAGAGCGGCTGATAGGAGAGAATACAAGACGAGAGTTGAAATATTTTTCCAATCCCTGGAAAGTGTTTTATTTGATTGTTGGCTTTTTCCTGCTGCAGATAGTTCCCACTTTACTGCAGACCGTATTGGCCATTAAGCAATCCTTAGCAGTGAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

501

Amino Acids

58.09

Weight (kDa)

6.36

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 27 - 480 2.5e-92 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000417)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g32770 FvH4_4g02520 FvH4_4g02520 FvH4_4g02530 FvH4_4g02550 FvH4_4g17730 FvH4_4g17730
rosa_chinensis RchiOBHm_Chr1g0318801 RchiOBHm_Chr4g0390011 RchiOBHm_Chr4g0390031 RchiOBHm_Chr4g0390041 RchiOBHm_Chr4g0390061 RchiOBHm_Chr4g0390091 RchiOBHm_Chr4g0390101 RchiOBHm_Chr4g0390141 RchiOBHm_Chr4g0390181 RchiOBHm_Chr4g0390191 RchiOBHm_Chr4g0390201 RchiOBHm_Chr4g0390231 RchiOBHm_Chr4g0390241 RchiOBHm_Chr4g0390251 RchiOBHm_Chr4g0390661 RchiOBHm_Chr4g0390711 RchiOBHm_Chr4g0390741 RchiOBHm_Chr4g0390771 RchiOBHm_Chr4g0390801 RchiOBHm_Chr5g0058271
rosa_laevigata RLG00000008685 RLG00000009910 RLG00000009930 RLG00000009932 RLG00000009933 RLG00000009934 RLG00000009935 RLG00000009937 RLG00000009938 RLG00000009940 RLG00000035208 RLG00000035209
rosa_multiflora Rmu_co8281525.1_g000001 Rmu_co8464925.1_g000001 Rmu_sc0000171.1_g000023 Rmu_sc0000171.1_g000027 Rmu_sc0000367.1_g000061 Rmu_sc0000679.1_g000027 Rmu_sc0001380.1_g000026 Rmu_sc0001380.1_g000030 Rmu_sc0001471.1_g000010 Rmu_sc0003643.1_g000007 Rmu_sc0004336.1_g000002 Rmu_sc0004336.1_g000011 Rmu_sc0004336.1_g000012 Rmu_sc0005003.1_g000007 Rmu_sc0005003.1_g000012 Rmu_sc0005003.1_g000016 Rmu_sc0005003.1_g000022 Rmu_sc0008322.1_g000002 Rmu_sc0011197.1_g000004 Rmu_sc0014620.1_g000006 Rmu_sc0014620.1_g000017 Rmu_sc0018617.1_g000002
rosa_roxburghii Rroxscaffold_1G00022270 Rroxscaffold_5G00336180 Rroxscaffold_5G00336220 Rroxscaffold_5G00336240 Rroxscaffold_5G00336250 Rroxscaffold_5G00336290 Rroxscaffold_5G00336310 Rroxscaffold_5G00336350 Rroxscaffold_5G00336370 Rroxscaffold_5G00336670 Rroxscaffold_5G00336700 Rroxscaffold_5G00336710
rosa_rugosa Rorug01G0020300 Rorug03G0327700 Rorug03G0327800 Rorug03G0328000 Rorug03G0328100 Rorug03G0328300 Rorug03G0328600 Rorug03G0328600 Rorug03G0331700 Rorug03G0331800 Rorug05G0312900
rosa_samantha Rh4DG024700 Rh4DG024900 Rh4DG025000 Rh4DG025200 Rh4DG025500 Rh4DG025900 Rh4DG026200 Rh4DG030200 Rh5DG407000
rosa_wichuraiana Rw4G002360 Rw4G002410 Rw4G002420 Rw4G002450 Rw4G002480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 702
AccB7I CCANNNNNTGG 1 cut(s) 1401
AccBSI CCGCTC 1 cut(s) 1351
AccII CGCG 2 cut(s) 60, 1026
AccIII TCCGGA 1 cut(s) 102
AciI CCGC 7 cut(s) 58, 315, 373, 942, 1024, 1026, 1351
AcoI YGGCCR 1 cut(s) 1473
AcsI RAATTY 4 cut(s) 276, 485, 933, 971
AcuI CTGAAG 4 cut(s) 67, 646, 867, 1246
AfaI GTAC 1 cut(s) 940
AfiI CCNNNNNNNGG 2 cut(s) 1276, 1401
AflIII ACRYGT 1 cut(s) 284
AgsI TTSAA 9 cut(s) 144, 271, 458, 976, 1137, 1310, 1327, 1345, 1384
AjnI CCWGG 1 cut(s) 1400
AjuI GAANNNNNNNTTGG 2 cut(s) 284, 316
AluBI AGCT 6 cut(s) 331, 670, 770, 821, 908, 1296
AluI AGCT 6 cut(s) 331, 670, 770, 821, 908, 1296
Alw21I GWGCWC 2 cut(s) 102, 333
Alw26I GTCTC 1 cut(s) 100
Aor13HI TCCGGA 1 cut(s) 102
AoxI GGCC 3 cut(s) 492, 837, 1473
ApeKI GCWGC 4 cut(s) 670, 734, 818, 1438
ApoI RAATTY 4 cut(s) 276, 485, 933, 971
ArsI GACNNNNNNTTYG 4 cut(s) 494, 526, 995, 1027
Asp700I GAANNNNTTC 1 cut(s) 897
AspLEI GCGC 1 cut(s) 811
AspS9I GGNCC 3 cut(s) 149, 492, 792
AsuC2I CCSGG 1 cut(s) 506
AsuII TTCGAA 1 cut(s) 482
AvaII GGWCC 2 cut(s) 149, 792
BaeI ACNNNNGTAYC 2 cut(s) 1264, 1297
BalI TGGCCA 1 cut(s) 1475
BanII GRGCYC 1 cut(s) 333
Bbv12I GWGCWC 2 cut(s) 102, 333
BbvI GCAGC 4 cut(s) 657, 721, 830, 1425
BccI CCATC 3 cut(s) 682, 1166, 1241
BciT130I CCWGG 1 cut(s) 1402
BciVI GTATCC 1 cut(s) 1292
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 506
BcoDI GTCTC 1 cut(s) 100
BfaI CTAG 1 cut(s) 560
BfmI CTRYAG 2 cut(s) 1439, 1460
BfuI GTATCC 1 cut(s) 1292
BglII AGATCT 1 cut(s) 922
BisI GCNGC 6 cut(s) 671, 735, 819, 1024, 1352, 1439
BlsI GCNGC 6 cut(s) 672, 736, 820, 1025, 1353, 1440
Bme1390I CCNGG 2 cut(s) 506, 1402
Bme18I GGWCC 2 cut(s) 149, 792
BmgT120I GGNCC 3 cut(s) 149, 492, 792
BmiI GGNNCC 2 cut(s) 1022, 1100
BmrFI CCNGG 2 cut(s) 506, 1402
BmsI GCATC 2 cut(s) 87, 718
Bpu10I CCTNAGC 1 cut(s) 1489
Bpu14I TTCGAA 1 cut(s) 482
BpuMI CCSGG 1 cut(s) 506
Bsa29I ATCGAT 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 287
BsaBI GATNNNNATC 1 cut(s) 927
BsaJI CCNNGG 6 cut(s) 411, 575, 834, 1024, 1126, 1400
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 2 cut(s) 1276, 1401
Bse1I ACTGG 1 cut(s) 25
Bse3DI GCAATG 2 cut(s) 1104, 1124
Bse8I GATNNNNATC 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 102
BseBI CCWGG 1 cut(s) 1402
BseCI ATCGAT 1 cut(s) 51
BseDI CCNNGG 6 cut(s) 411, 575, 834, 1024, 1126, 1400
BseGI GGATG 2 cut(s) 1005, 1239
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 2 cut(s) 1276, 1401
BseMI GCAATG 2 cut(s) 1104, 1124
BseMII CTCAG 2 cut(s) 318, 348
BseNI ACTGG 1 cut(s) 25
BseXI GCAGC 4 cut(s) 657, 721, 830, 1425
BsgI GTGCAG 2 cut(s) 731, 1336
Bsh1236I CGCG 2 cut(s) 60, 1026
BshFI GGCC 3 cut(s) 494, 839, 1475
BshVI ATCGAT 1 cut(s) 51
BsiHKAI GWGCWC 2 cut(s) 102, 333
BsiSI CCGG 3 cut(s) 103, 506, 1285
BslI CCNNNNNNNGG 2 cut(s) 1276, 1401
BsmAI GTCTC 1 cut(s) 100
BsnI GGCC 3 cut(s) 494, 839, 1475
Bsp119I TTCGAA 1 cut(s) 482
Bsp1286I GDGCHC 2 cut(s) 102, 333
Bsp13I TCCGGA 1 cut(s) 102
Bsp143I GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
Bsp19I CCATGG 2 cut(s) 834, 1126
BspACI CCGC 7 cut(s) 58, 315, 373, 942, 1024, 1026, 1351
BspANI GGCC 3 cut(s) 494, 839, 1475
BspCNI CTCAG 2 cut(s) 319, 347
BspDI ATCGAT 1 cut(s) 51
BspEI TCCGGA 1 cut(s) 102
BspFNI CGCG 2 cut(s) 60, 1026
BspHI TCATGA 1 cut(s) 901
BspLI GGNNCC 2 cut(s) 1022, 1100
BspMAI CTGCAG 2 cut(s) 1443, 1464
BspT104I TTCGAA 1 cut(s) 482
BsrBI CCGCTC 1 cut(s) 1351
BsrDI GCAATG 2 cut(s) 1104, 1124
BsrI ACTGG 1 cut(s) 25
BssECI CCNNGG 6 cut(s) 411, 575, 834, 1024, 1126, 1400
BssMI GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
BssT1I CCWWGG 4 cut(s) 411, 575, 834, 1126
Bst2UI CCWGG 1 cut(s) 1402
Bst4CI ACNGT 7 cut(s) 37, 443, 462, 524, 1062, 1314, 1468
Bst6I CTCTTC 1 cut(s) 300
BstAPI GCANNNNNTGC 1 cut(s) 75
BstBAI YACGTR 1 cut(s) 287
BstBI TTCGAA 1 cut(s) 482
BstC8I GCNNGC 3 cut(s) 373, 668, 1041
BstDEI CTNAG 3 cut(s) 327, 334, 1489
BstDSI CCRYGG 3 cut(s) 834, 1024, 1126
BstENI CCTNNNNNAGG 1 cut(s) 1274
BstF5I GGATG 2 cut(s) 1005, 1239
BstFNI CGCG 2 cut(s) 60, 1026
BstHHI GCGC 1 cut(s) 811
BstKTI GATC 6 cut(s) 31, 340, 400, 760, 925, 1075
BstMAI GTCTC 1 cut(s) 100
BstMBI GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
BstMWI GCNNNNNNNGC 4 cut(s) 66, 75, 216, 815
BstNI CCWGG 1 cut(s) 1402
BstNSI RCATGY 1 cut(s) 1043
BstSCI CCNGG 2 cut(s) 504, 1400
BstSFI CTRYAG 2 cut(s) 1439, 1460
BstUI CGCG 2 cut(s) 60, 1026
BstV1I GCAGC 4 cut(s) 657, 721, 830, 1425
BstX2I RGATCY 1 cut(s) 922
BstXI CCANNNNNNTGG 1 cut(s) 1165
BstYI RGATCY 1 cut(s) 922
Bsu15I ATCGAT 1 cut(s) 51
BsuI GTATCC 1 cut(s) 1292
BsuRI GGCC 3 cut(s) 494, 839, 1475
BsuTUI ATCGAT 1 cut(s) 51
BtgI CCRYGG 3 cut(s) 834, 1024, 1126
BtsCI GGATG 2 cut(s) 1005, 1239
BtsI GCAGTG 1 cut(s) 1500
BtsIMutI CAGTG 1 cut(s) 1500
Cac8I GCNNGC 3 cut(s) 373, 668, 1041
CciI TCATGA 1 cut(s) 901
CfoI GCGC 1 cut(s) 811
Cfr13I GGNCC 3 cut(s) 149, 492, 792
Cfr42I CCGCGG 1 cut(s) 1027
ClaI ATCGAT 1 cut(s) 51
CseI GACGC 2 cut(s) 236, 970
Csp6I GTAC 1 cut(s) 939
CviAII CATG 9 cut(s) 393, 517, 545, 611, 835, 854, 902, 1040, 1127
CviQI GTAC 1 cut(s) 939
DdeI CTNAG 3 cut(s) 327, 334, 1489
DpnI GATC 6 cut(s) 30, 339, 399, 759, 924, 1074
DpnII GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
EaeI YGGCCR 1 cut(s) 1473
Eam1104I CTCTTC 1 cut(s) 300
EarI CTCTTC 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 331
Eco130I CCWWGG 4 cut(s) 411, 575, 834, 1126
Eco24I GRGCYC 1 cut(s) 333
Eco47I GGWCC 2 cut(s) 149, 792
Eco53kI GAGCTC 1 cut(s) 331
Eco57I CTGAAG 4 cut(s) 67, 646, 867, 1246
EcoICRI GAGCTC 1 cut(s) 331
EcoNI CCTNNNNNAGG 1 cut(s) 1274
EcoO109I RGGNCCY 1 cut(s) 492
EcoRII CCWGG 1 cut(s) 1400
EcoT14I CCWWGG 4 cut(s) 411, 575, 834, 1126
EcoT22I ATGCAT 1 cut(s) 80
EcoT38I GRGCYC 1 cut(s) 333
ErhI CCWWGG 4 cut(s) 411, 575, 834, 1126
FaeI CATG 9 cut(s) 396, 520, 548, 614, 838, 857, 905, 1043, 1130
FalI AAGNNNNNCTT 2 cut(s) 1472, 1504
FatI CATG 9 cut(s) 392, 516, 544, 610, 834, 853, 901, 1039, 1126
FauI CCCGC 2 cut(s) 380, 1019
FbaI TGATCA 1 cut(s) 397
Fnu4HI GCNGC 6 cut(s) 671, 735, 819, 1024, 1352, 1439
FokI GGATG 2 cut(s) 992, 1246
FriOI GRGCYC 1 cut(s) 333
Fsp4HI GCNGC 6 cut(s) 671, 735, 819, 1024, 1352, 1439
FspBI CTAG 1 cut(s) 560
GlaI GCGC 1 cut(s) 810
GluI GCNGC 6 cut(s) 671, 735, 819, 1024, 1352, 1439
HaeIII GGCC 3 cut(s) 494, 839, 1475
HapII CCGG 3 cut(s) 103, 506, 1285
HgaI GACGC 2 cut(s) 236, 970
HhaI GCGC 1 cut(s) 811
Hin1II CATG 9 cut(s) 396, 520, 548, 614, 838, 857, 905, 1043, 1130
Hin6I GCGC 1 cut(s) 809
HinP1I GCGC 1 cut(s) 809
HincII GTYRAC 3 cut(s) 312, 439, 862
HindII GTYRAC 3 cut(s) 312, 439, 862
HinfI GANTC 6 cut(s) 198, 632, 830, 863, 1011, 1054
HpaII CCGG 3 cut(s) 103, 506, 1285
Hpy166II GTNNAC 4 cut(s) 312, 439, 862, 1336
Hpy188III TCNNGA 5 cut(s) 103, 167, 424, 902, 1096
Hpy8I GTNNAC 4 cut(s) 312, 439, 862, 1336
Hpy99I CGWCG 2 cut(s) 230, 986
HpyAV CCTTC 5 cut(s) 182, 200, 344, 670, 1011
HpyCH4III ACNGT 7 cut(s) 37, 443, 462, 524, 1062, 1314, 1468
HpyCH4IV ACGT 4 cut(s) 96, 135, 286, 960
HpyCH4V TGCA 8 cut(s) 8, 78, 386, 748, 1109, 1317, 1441, 1462
HpyF10VI GCNNNNNNNGC 4 cut(s) 66, 75, 216, 815
HpyF3I CTNAG 3 cut(s) 327, 334, 1489
HpySE526I ACGT 4 cut(s) 96, 135, 286, 960
Hsp92II CATG 9 cut(s) 396, 520, 548, 614, 838, 857, 905, 1043, 1130
HspAI GCGC 1 cut(s) 809
Kpn2I TCCGGA 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 397
KspI CCGCGG 1 cut(s) 1027
Kzo9I GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
LmnI GCTCC 3 cut(s) 105, 561, 1020
Lsp1109I GCAGC 4 cut(s) 657, 721, 830, 1425
LweI GCATC 2 cut(s) 87, 718
MaeI CTAG 1 cut(s) 560
MaeII ACGT 4 cut(s) 96, 135, 286, 960
MaeIII GTNAC 1 cut(s) 473
MalI GATC 6 cut(s) 30, 339, 399, 759, 924, 1074
MbiI CCGCTC 1 cut(s) 1351
MboI GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
MfeI CAATTG 3 cut(s) 721, 1110, 1322
MflI RGATCY 1 cut(s) 922
MhlI GDGCHC 2 cut(s) 102, 333
MlsI TGGCCA 1 cut(s) 1475
MluNI TGGCCA 1 cut(s) 1475
MlyI GAGTC 2 cut(s) 207, 857
MmeI TCCRAC 1 cut(s) 262
MnlI CCTC 8 cut(s) 170, 178, 196, 355, 505, 647, 1112, 1180
Mox20I TGGCCA 1 cut(s) 1475
Mph1103I ATGCAT 1 cut(s) 80
MroI TCCGGA 1 cut(s) 102
MroXI GAANNNNTTC 1 cut(s) 897
MscI TGGCCA 1 cut(s) 1475
MseI TTAA 5 cut(s) 654, 788, 969, 1064, 1479
MslI CAYNNNNRTG 3 cut(s) 287, 425, 1163
Msp20I TGGCCA 1 cut(s) 1475
MspA1I CMGCKG 2 cut(s) 821, 1026
MspI CCGG 3 cut(s) 103, 506, 1285
MspR9I CCNGG 2 cut(s) 506, 1402
MunI CAATTG 3 cut(s) 721, 1110, 1322
MvaI CCWGG 1 cut(s) 1402
MvnI CGCG 2 cut(s) 60, 1026
MwoI GCNNNNNNNGC 4 cut(s) 66, 75, 216, 815
NciI CCSGG 1 cut(s) 506
NcoI CCATGG 2 cut(s) 834, 1126
NdeII GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
NlaIII CATG 9 cut(s) 396, 520, 548, 614, 838, 857, 905, 1043, 1130
NlaIV GGNNCC 2 cut(s) 1022, 1100
NmuCI GTSAC 1 cut(s) 473
NsiI ATGCAT 1 cut(s) 80
NspI RCATGY 1 cut(s) 1043
NspV TTCGAA 1 cut(s) 482
PaeI GCATGC 1 cut(s) 1043
PagI TCATGA 1 cut(s) 901
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 897
PfeI GAWTC 4 cut(s) 632, 830, 1011, 1054
PflMI CCANNNNNTGG 1 cut(s) 1401
PkrI GCNGC 6 cut(s) 672, 736, 820, 1025, 1353, 1440
PleI GAGTC 2 cut(s) 206, 857
PpsI GAGTC 2 cut(s) 206, 857
Ppu21I YACGTR 1 cut(s) 287
PsiI TTATAA 1 cut(s) 702
Psp124BI GAGCTC 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 1400
PspGI CCWGG 1 cut(s) 1400
PspN4I GGNNCC 2 cut(s) 1022, 1100
PspPI GGNCC 3 cut(s) 149, 492, 792
PstI CTGCAG 2 cut(s) 1443, 1464
PsuI RGATCY 1 cut(s) 922
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 1 cut(s) 940
RsaNI GTAC 1 cut(s) 939
RseI CAYNNNNRTG 3 cut(s) 287, 425, 1163
SacI GAGCTC 1 cut(s) 333
SacII CCGCGG 1 cut(s) 1027
SaqAI TTAA 5 cut(s) 654, 788, 969, 1064, 1479
SatI GCNGC 6 cut(s) 671, 735, 819, 1024, 1352, 1439
Sau3AI GATC 6 cut(s) 28, 337, 397, 757, 922, 1072
Sau96I GGNCC 3 cut(s) 149, 492, 792
SchI GAGTC 2 cut(s) 207, 857
ScrFI CCNGG 2 cut(s) 506, 1402
SduI GDGCHC 2 cut(s) 102, 333
SfaNI GCATC 2 cut(s) 87, 718
SfcI CTRYAG 2 cut(s) 1439, 1460
Sfr303I CCGCGG 1 cut(s) 1027
SfuI TTCGAA 1 cut(s) 482
SgrBI CCGCGG 1 cut(s) 1027
SinI GGWCC 2 cut(s) 149, 792
SmiMI CAYNNNNRTG 3 cut(s) 287, 425, 1163
SphI GCATGC 1 cut(s) 1043
SsiI CCGC 7 cut(s) 58, 315, 373, 942, 1024, 1026, 1351
SspI AATATT 1 cut(s) 1388
SspMI CTAG 1 cut(s) 560
SstI GAGCTC 1 cut(s) 333
StyD4I CCNGG 2 cut(s) 504, 1400
StyI CCWWGG 4 cut(s) 411, 575, 834, 1126
TaaI ACNGT 7 cut(s) 37, 443, 462, 524, 1062, 1314, 1468
TaiI ACGT 4 cut(s) 99, 138, 289, 963
TaqI TCGA 6 cut(s) 51, 201, 423, 482, 513, 984
TauI GCSGC 2 cut(s) 1026, 1354
TfiI GAWTC 4 cut(s) 632, 830, 1011, 1054
Tru1I TTAA 5 cut(s) 654, 788, 969, 1064, 1479
Tru9I TTAA 5 cut(s) 654, 788, 969, 1064, 1479
TscAI CASTG 1 cut(s) 1500
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 4 cut(s) 670, 734, 818, 1438
Tsp45I GTSAC 1 cut(s) 473
TspRI CASTG 1 cut(s) 1500
Van91I CCANNNNNTGG 1 cut(s) 1401
VpaK11BI GGWCC 2 cut(s) 149, 792
XagI CCTNNNNNAGG 1 cut(s) 1274
XapI RAATTY 4 cut(s) 276, 485, 933, 971
XceI RCATGY 1 cut(s) 1043
XmnI GAANNNNTTC 1 cut(s) 897
XspI CTAG 1 cut(s) 560
Zsp2I ATGCAT 1 cut(s) 80
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.