Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000563

Physical Location & Seq

Genomic Coordinates Reverse (-)

30257472 .. 30259837

Gene Structure 2366 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g30830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGCCACCTAGTACAGCCCAAAGAGTCCTAGACTCTAGGAGACAAAAGGGGACCAGTTTGAAGTGGTCACATAGAAACTTTGAAGACGATGTCGATGCAGAAGGATATATTCTTGCACTTGAATATGTTGACCGACTTTTGGGTCTAAATCTCAGAGAGTTCAGCGAATGGCACTCTTCCAAGCCTGAGTTTGAAGTTGTTCAGAATCTGAATCATCCAACCGGCCGTGGTAGCGGTAACAGAACCAAAGATTGTATGACTGTGTTTAATTCCAACTTGTATATGATGACTGAAACTAGGCGCCACCGCGGAGATGAAAGCTTGGACTTGAATGTTTATTCCTTTGATCCTACTGACCCGGATGACCGCAAATCCATTCTGCCATCATATTCATATCGCCGGCGTGAGGAAGAGCCACAACTTTTTTGGGTTTTTGATCCTTTTCACGAATTCTGGAAACAACTCCCTCATCCTCCCCTCGACAATTTTGATCGTTGTTTTTCGTTGTACTATGATGTTTCTTGTGGTCACAAGCTTCTTGTTCGTACATACAATCAAAGATACGTTTTCGACGCTCACCAAGAGAGATGGGCGGAATGTCGTCCTCGCAGTGTTTATGATGAGCACTACTTTGAATTTAGGGCAATTGTGGAATTTGATGATGGCTTTTTAATTGCTGTGCCTCAGAACAATAAACAGAAGAAGAGCCTTGAGCTTGTTGCTTATAAGTTGGATGAGAAGGGGATCCCTCAGCAGCATCAGGTTCTACATGAGCTTAACATGATGTTCTCTTCTCGTCCTTTGTTAAGTAACCCTCAGGTGTTTTTGGCCAAATGTGATGATAACCTTATGTGGTTGGTCTATTCTGGCAAGGATAATGTCCAAGGGTTTACTTGTATTGGTGTCGCAGTGTTTCGAGTCTCCATGTCATATGACGATGCTGGGAATGAAGTGTTTTCGGTTGATATTGAGGCTGCGGATTTTATTGATTTAAATAGTCTTGAGGTGCAAGGCCCCGAGAAGACCACCCAAGTTTACTCAGCTTCTGCCATGTGCCATGATGATTTGAAAACCAATTGCAAGGACTGGTTTTTGTACTTGAATGTGGGGGATCGACTATGCCGTCTAAACATTACTGAATTCTGCAAAAGGAGGAGCTCTTTCATGCCTAAGACGTTTGAGCTTGTACATTTGTCCTATCCAGAAGGTCATCCTAGTAAAATCCCGAGTAGAATGAGACATATAGTTGTGGGATCGAAAGTGTATCTGGTTGGCGGTCACAGACTCGATCGAAGAATCCATAGTGATGCACATGGGAGATGTTTTCCGATGCCCAACTTAGAGATTTATGCACTCAGTTACAACTATGAAGCAGAAGAGGGTCCTTCTATTACCCTCTGTCAATGTGAATTAGGTTCTATTCCTAAGTTGATTGATCCACGGACCAAGACCATTCCTTTCACTATCACTCTTGATGATAAGATCTATGTTCTGGCAAAAAGACCATACTTGGGGGAAGCAGAAGAACTCAATGATCATGATCAGCCACCACTTTTTAAGGTTTTTGATCCTCTCAAACAATCTTGGAAACCACTCCCTCATCCTCCCTGCTATGATATGCCATCTCGCGACACTGAGCCTTATGTGTGTAACTACTTCTCTTGGGGACACAAGTTCATTATTCGTACAGAGGCAAAGAAGAAGAACCGTGGCACATACATTTTTGACACTCACCGAGAGAAATGGGAGGATGCCAAGAATACGAGTGCAATCCTTAATGAGGGTTTTAGGGCTGTGGCAGAATTTCAGGGGTTTTTAATTGGCATGCCTTATGAGCGCCAAGAACTTGTTGCTTACCATTTGGATTCGGATGGGATTCCCAAACTCTCTAATGTGCTTCACGAGCTGCAAGGGATATTTAGCTCTTGTTCACTTGTCTCCGACTGTTTTCTTGGAAAATTTGATGATGACCGTATGTGGCTGGTGTATTCTGCGCAGGATAGTATGAAATCTTGGCATGCACGTGTAGCGGTGTTTCGTGTTTTCATCTCTAATGACATAGCTGGAGCTGAAGTCCTCTGTGCAGATCTTGAGGCTGCAGAATTCTTTCAGTTCGATAGATTTATTTCCTCAGCTTTCACCTATGCTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006479 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016278 GO:0016279 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018026 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

718

Amino Acids

83.33

Weight (kDa)

5.7

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Kelch_FKB95	PF25210	448 - 678	1.6e-06	FKB95, Kelch-repeats domain
DUF1668	PF07893	471 - 586	9.5e-11	Protein of unknown function (DUF1668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000563)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40701 FvH4_3g40701 FvH4_3g42210 FvH4_4g30821 FvH4_4g30830 FvH4_4g30861 FvH4_4g30870 FvH4_4g30880 FvH4_4g30890 FvH4_6g30071 FvH4_6g44331 FvH4_6g44332 FvH4_6g44333
malus_domestica	MD15G1041200.v1.1 MD15G1041700.v1.1 MD15G1401000.v1.1
prunus_persica	Prupe.5G008800_v2.0.a1 Prupe.5G157900_v2.0.a1
pyrus_communis	pycom05g01010 pycom15g03820 pycom15g03830 pycom15g03850 pycom15g04240
rosa_chinensis	RchiOBHm_Chr5g0075231
rosa_laevigata	RLG00000008231 RLG00000008232 RLG00000008235 RLG00000008239 RLG00000008240 RLG00000008241 RLG00000021260 RLG00000021269 RLG00000036539 RLG00000036540 RLG00000037046
rosa_multiflora	Rmu_sc0000955.1_g000047 Rmu_sc0006420.1_g000034
rosa_roxburghii	Rroxscaffold_1G00000870 Rroxscaffold_1G00000880 Rroxscaffold_1G00006320 Rroxscaffold_2G00088990 Rroxscaffold_2G00089000 Rroxscaffold_2G00089010 Rroxscaffold_2G00089100 Rroxscaffold_5G00357190 Rroxscaffold_5G00357200
rosa_rugosa	Rorug04G0118300 Rorug04G0118400 Rorug05G0437400 Rorug05G0439900
rosa_samantha	Rh2AG552900 Rh2AG553000 Rh2BG566800 Rh2CG536900 Rh2DG575800 Rh2DG575900 Rh4AG177300 Rh4AG177400 Rh4AG178100 Rh4AG178300 Rh4AG178400 Rh4AG178500 Rh4BG177100 Rh4BG177200 Rh4BG177700 Rh4CG188300 Rh4CG188700 Rh4CG188800 Rh4CG189000 Rh4CG189100 Rh5AG494400 Rh5AG497000 Rh5AG537400 Rh5BG515800 Rh5BG515900 Rh5BG516000 Rh5CG539600 Rh5CG539700 Rh5CG539800 Rh5DG528600 Rh5DG528700
rosa_wichuraiana	Rw2G045740 Rw4G014830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	726
AasI	GACNNNNNNGTC	2 cut(s)	141, 1122
Acc16I	TGCGCA	1 cut(s)	1995
AccB1I	GGYRCC	1 cut(s)	300
AccII	CGCG	2 cut(s)	309, 1629
AciI	CCGC	8 cut(s)	234, 307, 309, 367, 593, 977, 1275, 2030
AclWI	GGATC	8 cut(s)	341, 431, 739, 752, 1119, 1261, 1430, 1562
AcoI	YGGCCR	2 cut(s)	223, 828
AcsI	RAATTY	7 cut(s)	449, 635, 653, 1139, 1802, 1958, 2102
AcuI	CTGAAG	1 cut(s)	2091
AcvI	CACGTG	1 cut(s)	2024
AcyI	GRCGYC	1 cut(s)	301
AfaI	GTAC	6 cut(s)	13, 509, 547, 1097, 1188, 1687
AfiI	CCNNNNNNNGG	4 cut(s)	139, 406, 1511, 1780
AflIII	ACRYGT	1 cut(s)	2023
AgsI	TTSAA	8 cut(s)	61, 83, 122, 194, 331, 635, 1069, 1102
Alw21I	GWGCWC	2 cut(s)	627, 1160
Alw26I	GTCTC	4 cut(s)	34, 925, 1231, 1942
AlwI	GGATC	8 cut(s)	341, 431, 739, 752, 1119, 1261, 1430, 1562
AlwNI	CAGNNNCTG	2 cut(s)	208, 1046
Ama87I	CYCGRG	2 cut(s)	1016, 1225
AoxI	GGCC	3 cut(s)	223, 828, 1012
ApeKI	GCWGC	4 cut(s)	754, 974, 1906, 2096
ApoI	RAATTY	7 cut(s)	449, 635, 653, 1139, 1802, 1958, 2102
Asp700I	GAANNNNTTC	2 cut(s)	198, 2106
AspLEI	GCGC	3 cut(s)	303, 1839, 1996
AspS9I	GGNCC	4 cut(s)	51, 1013, 1382, 1443
AsuC2I	CCSGG	1 cut(s)	359
AsuHPI	GGTGA	3 cut(s)	569, 1724, 2131
AvaI	CYCGRG	2 cut(s)	1016, 1225
AvaII	GGWCC	3 cut(s)	51, 1382, 1443
AxyI	CCTNAGG	1 cut(s)	816
BalI	TGGCCA	1 cut(s)	830
BamHI	GGATCC	1 cut(s)	744
BanI	GGYRCC	1 cut(s)	300
BanII	GRGCYC	1 cut(s)	1160
BauI	CACGAG	1 cut(s)	1901
BbrPI	CACGTG	1 cut(s)	2024
BbsI	GAAGAC	2 cut(s)	90, 1028
Bbv12I	GWGCWC	2 cut(s)	627, 1160
BbvCI	CCTCAGC	2 cut(s)	750, 2131
BbvI	GCAGC	4 cut(s)	766, 961, 1893, 2083
BccI	CCATC	5 cut(s)	391, 582, 656, 1630, 1865
BceAI	ACGGC	2 cut(s)	210, 1107
BcgI	CGANNNNNNTGC	2 cut(s)	77, 111
BclI	TGATCA	2 cut(s)	1534, 1540
BcnI	CCSGG	1 cut(s)	359
BcoDI	GTCTC	4 cut(s)	34, 925, 1231, 1942
BfaI	CTAG	5 cut(s)	9, 29, 36, 297, 1215
BfmI	CTRYAG	1 cut(s)	2097
BfoI	RGCGCY	2 cut(s)	304, 1840
BglII	AGATCT	2 cut(s)	1482, 2086
BisI	GCNGC	4 cut(s)	755, 975, 1907, 2097
BlsI	GCNGC	4 cut(s)	756, 976, 1908, 2098
Bme1390I	CCNGG	1 cut(s)	359
Bme18I	GGWCC	3 cut(s)	51, 1382, 1443
BmeT110I	CYCGRG	2 cut(s)	1016, 1225
BmgT120I	GGNCC	4 cut(s)	51, 1013, 1382, 1443
BmiI	GGNNCC	5 cut(s)	52, 302, 746, 1015, 1383
BmrFI	CCNGG	1 cut(s)	359
BmsI	GCATC	6 cut(s)	85, 766, 928, 1297, 1320, 1741
BpiI	GAAGAC	2 cut(s)	90, 1028
BpmI	CTGGAG	1 cut(s)	2085
Bpu10I	CCTNAGC	2 cut(s)	750, 2131
BpuEI	CTTGAG	3 cut(s)	731, 1022, 2111
BpuMI	CCSGG	1 cut(s)	359
BsaAI	YACGTR	1 cut(s)	2024
BsaBI	GATNNNNATC	1 cut(s)	1539
BsaHI	GRCGYC	1 cut(s)	301
BsaJI	CCNNGG	5 cut(s)	226, 307, 883, 1439, 1708
BsaXI	ACNNNNNCTCC	3 cut(s)	2058, 2088, 2131
Bsc4I	CCNNNNNNNGG	4 cut(s)	139, 406, 1511, 1780
Bse118I	RCCGGY	2 cut(s)	221, 399
Bse1I	ACTGG	2 cut(s)	54, 1091
Bse21I	CCTNAGG	1 cut(s)	816
Bse8I	GATNNNNATC	1 cut(s)	1539
BseDI	CCNNGG	5 cut(s)	226, 307, 883, 1439, 1708
BseGI	GGATG	8 cut(s)	214, 367, 469, 739, 1210, 1600, 1756, 1876
BseJI	GATNNNNATC	1 cut(s)	1539
BseLI	CCNNNNNNNGG	4 cut(s)	139, 406, 1511, 1780
BseMII	CTCAG	9 cut(s)	166, 177, 698, 764, 830, 1053, 1369, 1626, 2145
BseNI	ACTGG	2 cut(s)	54, 1091
BseRI	GAGGAG	1 cut(s)	1168
BseX3I	CGGCCG	1 cut(s)	223
BseXI	GCAGC	4 cut(s)	766, 961, 1893, 2083
BseYI	CCCAGC	1 cut(s)	941
BsgI	GTGCAG	1 cut(s)	2103
Bsh1236I	CGCG	2 cut(s)	309, 1629
Bsh1285I	CGRYCG	2 cut(s)	226, 1291
BshFI	GGCC	3 cut(s)	225, 830, 1014
BshNI	GGYRCC	1 cut(s)	300
BsiEI	CGRYCG	2 cut(s)	226, 1291
BsiHKAI	GWGCWC	2 cut(s)	627, 1160
BsiHKCI	CYCGRG	2 cut(s)	1016, 1225
BsiSI	CCGG	3 cut(s)	222, 359, 400
BslFI	GGGAC	2 cut(s)	64, 1680
BslI	CCNNNNNNNGG	4 cut(s)	139, 406, 1511, 1780
BsmAI	GTCTC	4 cut(s)	34, 925, 1231, 1942
BsmFI	GGGAC	2 cut(s)	64, 1680
BsnI	GGCC	3 cut(s)	225, 830, 1014
BsoBI	CYCGRG	2 cut(s)	1016, 1225
Bsp1286I	GDGCHC	2 cut(s)	627, 1160
Bsp1407I	TGTACA	1 cut(s)	1186
Bsp68I	TCGCGA	1 cut(s)	1629
BspACI	CCGC	8 cut(s)	234, 307, 309, 367, 593, 977, 1275, 2030
BspANI	GGCC	3 cut(s)	225, 830, 1014
BspCNI	CTCAG	9 cut(s)	165, 178, 697, 763, 829, 1052, 1368, 1627, 2144
BspFNI	CGCG	2 cut(s)	309, 1629
BspHI	TCATGA	1 cut(s)	1537
BspLI	GGNNCC	5 cut(s)	52, 302, 746, 1015, 1383
BspMAI	CTGCAG	1 cut(s)	2101
BspPI	GGATC	8 cut(s)	341, 431, 739, 752, 1119, 1261, 1430, 1562
BspQI	GCTCTTC	2 cut(s)	405, 698
BspT107I	GGYRCC	1 cut(s)	300
BsrFI	RCCGGY	2 cut(s)	221, 399
BsrGI	TGTACA	1 cut(s)	1186
BsrI	ACTGG	2 cut(s)	54, 1091
BssAI	RCCGGY	2 cut(s)	221, 399
BssECI	CCNNGG	5 cut(s)	226, 307, 883, 1439, 1708
BssNI	GRCGYC	1 cut(s)	301
BssSI	CACGAG	1 cut(s)	1901
BssT1I	CCWWGG	1 cut(s)	883
Bst2BI	CACGAG	1 cut(s)	1901
Bst4CI	ACNGT	4 cut(s)	262, 1709, 1946, 1973
Bst6I	CTCTTC	5 cut(s)	181, 405, 698, 796, 1371
BstACI	GRCGYC	1 cut(s)	301
BstAUI	TGTACA	1 cut(s)	1186
BstBAI	YACGTR	1 cut(s)	2024
BstC8I	GCNNGC	3 cut(s)	401, 1826, 2019
BstDSI	CCRYGG	4 cut(s)	226, 307, 1439, 1708
BstENI	CCTNNNNNAGG	1 cut(s)	1778
BstF5I	GGATG	8 cut(s)	214, 367, 469, 739, 1210, 1600, 1756, 1876
BstFNI	CGCG	2 cut(s)	309, 1629
BstH2I	RGCGCY	2 cut(s)	304, 1840
BstHHI	GCGC	3 cut(s)	303, 1839, 1996
BstMAI	GTCTC	4 cut(s)	34, 925, 1231, 1942
BstMCI	CGRYCG	2 cut(s)	226, 1291
BstMWI	GCNNNNNNNGC	4 cut(s)	231, 1834, 1903, 2027
BstNSI	RCATGY	2 cut(s)	1828, 2021
BstSCI	CCNGG	1 cut(s)	357
BstSFI	CTRYAG	1 cut(s)	2097
BstUI	CGCG	2 cut(s)	309, 1629
BstV1I	GCAGC	4 cut(s)	766, 961, 1893, 2083
BstV2I	GAAGAC	2 cut(s)	90, 1028
BstX2I	RGATCY	3 cut(s)	744, 1482, 2086
BstYI	RGATCY	3 cut(s)	744, 1482, 2086
BstZI	CGGCCG	1 cut(s)	223
Bsu36I	CCTNAGG	1 cut(s)	816
BsuRI	GGCC	3 cut(s)	225, 830, 1014
BtgI	CCRYGG	4 cut(s)	226, 307, 1439, 1708
BtsCI	GGATG	8 cut(s)	214, 367, 469, 739, 1210, 1600, 1756, 1876
BtsI	GCAGTG	2 cut(s)	616, 915
BtsIMutI	CAGTG	3 cut(s)	616, 915, 1632
BtuMI	TCGCGA	1 cut(s)	1629
Cac8I	GCNNGC	3 cut(s)	401, 1826, 2019
CaiI	CAGNNNCTG	2 cut(s)	208, 1046
CciI	TCATGA	1 cut(s)	1537
CfoI	GCGC	3 cut(s)	303, 1839, 1996
Cfr10I	RCCGGY	2 cut(s)	221, 399
Cfr13I	GGNCC	4 cut(s)	51, 1013, 1382, 1443
Cfr42I	CCGCGG	1 cut(s)	310
CseI	GACGC	1 cut(s)	581
Csp6I	GTAC	6 cut(s)	12, 508, 546, 1096, 1187, 1686
CviQI	GTAC	6 cut(s)	12, 508, 546, 1096, 1187, 1686
DinI	GGCGCC	1 cut(s)	302
DraI	TTTAAA	1 cut(s)	993
DrdI	GACNNNNNNGTC	2 cut(s)	141, 1122
DseDI	GACNNNNNNGTC	2 cut(s)	141, 1122
EaeI	YGGCCR	2 cut(s)	223, 828
EagI	CGGCCG	1 cut(s)	223
Eam1104I	CTCTTC	5 cut(s)	181, 405, 698, 796, 1371
EarI	CTCTTC	5 cut(s)	181, 405, 698, 796, 1371
EciI	GGCGGA	1 cut(s)	608
Ecl136II	GAGCTC	1 cut(s)	1158
EclXI	CGGCCG	1 cut(s)	223
Eco130I	CCWWGG	1 cut(s)	883
Eco24I	GRGCYC	1 cut(s)	1160
Eco47I	GGWCC	3 cut(s)	51, 1382, 1443
Eco52I	CGGCCG	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	1158
Eco57I	CTGAAG	1 cut(s)	2091
Eco72I	CACGTG	1 cut(s)	2024
Eco81I	CCTNAGG	1 cut(s)	816
Eco88I	CYCGRG	2 cut(s)	1016, 1225
EcoICRI	GAGCTC	1 cut(s)	1158
EcoNI	CCTNNNNNAGG	1 cut(s)	1778
EcoO109I	RGGNCCY	2 cut(s)	1013, 1382
EcoRI	GAATTC	3 cut(s)	449, 1139, 2102
EcoT14I	CCWWGG	1 cut(s)	883
EcoT38I	GRGCYC	1 cut(s)	1160
EgeI	GGCGCC	1 cut(s)	302
EheI	GGCGCC	1 cut(s)	302
ErhI	CCWWGG	1 cut(s)	883
FaqI	GGGAC	2 cut(s)	64, 1680
FauNDI	CATATG	1 cut(s)	931
FbaI	TGATCA	2 cut(s)	1534, 1540
Fnu4HI	GCNGC	4 cut(s)	755, 975, 1907, 2097
FokI	GGATG	8 cut(s)	201, 374, 456, 746, 1197, 1587, 1763, 1883
FriOI	GRGCYC	1 cut(s)	1160
Fsp4HI	GCNGC	4 cut(s)	755, 975, 1907, 2097
FspBI	CTAG	5 cut(s)	9, 29, 36, 297, 1215
FspI	TGCGCA	1 cut(s)	1995
GlaI	GCGC	3 cut(s)	302, 1838, 1995
GluI	GCNGC	4 cut(s)	755, 975, 1907, 2097
GsaI	CCCAGC	1 cut(s)	945
GsuI	CTGGAG	1 cut(s)	2085
HaeII	RGCGCY	2 cut(s)	304, 1840
HaeIII	GGCC	3 cut(s)	225, 830, 1014
HapII	CCGG	3 cut(s)	222, 359, 400
HgaI	GACGC	1 cut(s)	581
HhaI	GCGC	3 cut(s)	303, 1839, 1996
Hin1I	GRCGYC	1 cut(s)	301
Hin6I	GCGC	3 cut(s)	301, 1837, 1994
HinP1I	GCGC	3 cut(s)	301, 1837, 1994
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HindIII	AAGCTT	2 cut(s)	319, 533
HinfI	GANTC	9 cut(s)	24, 32, 205, 211, 918, 1284, 1296, 1865, 1876
HpaII	CCGG	3 cut(s)	222, 359, 400
HphI	GGTGA	3 cut(s)	569, 1724, 2131
Hpy166II	GTNNAC	4 cut(s)	130, 891, 1036, 1931
Hpy188I	TCNGA	7 cut(s)	155, 204, 210, 687, 1329, 1870, 1942
Hpy8I	GTNNAC	4 cut(s)	130, 891, 1036, 1931
Hpy99I	CGWCG	1 cut(s)	575
HpyAV	CCTTC	4 cut(s)	95, 733, 1199, 1395
HpyCH4III	ACNGT	4 cut(s)	262, 1709, 1946, 1973
HpyCH4IV	ACGT	3 cut(s)	564, 1175, 2023
HpyF10VI	GCNNNNNNNGC	4 cut(s)	231, 1834, 1903, 2027
HpySE526I	ACGT	3 cut(s)	564, 1175, 2023
Hsp92I	GRCGYC	1 cut(s)	301
HspAI	GCGC	3 cut(s)	301, 1837, 1994
KasI	GGCGCC	1 cut(s)	300
KroI	GCCGGC	1 cut(s)	399
KroNI	GCCGGC	1 cut(s)	401
Ksp22I	TGATCA	2 cut(s)	1534, 1540
KspI	CCGCGG	1 cut(s)	310
LguI	GCTCTTC	2 cut(s)	405, 698
LmnI	GCTCC	3 cut(s)	1155, 2066, 2152
Lsp1109I	GCAGC	4 cut(s)	766, 961, 1893, 2083
LweI	GCATC	6 cut(s)	85, 766, 928, 1297, 1320, 1741
MaeI	CTAG	5 cut(s)	9, 29, 36, 297, 1215
MaeII	ACGT	3 cut(s)	564, 1175, 2023
MaeIII	GTNAC	7 cut(s)	66, 236, 527, 809, 1277, 1358, 1649
MfeI	CAATTG	2 cut(s)	645, 1075
MflI	RGATCY	3 cut(s)	744, 1482, 2086
MhlI	GDGCHC	2 cut(s)	627, 1160
MlsI	TGGCCA	1 cut(s)	830
MluNI	TGGCCA	1 cut(s)	830
Mly113I	GGCGCC	1 cut(s)	301
MlyI	GAGTC	4 cut(s)	26, 33, 927, 1278
MmeI	TCCRAC	4 cut(s)	242, 297, 711, 1965
Mox20I	TGGCCA	1 cut(s)	830
MreI	CGCCGGCG	1 cut(s)	399
MroNI	GCCGGC	1 cut(s)	399
MroXI	GAANNNNTTC	2 cut(s)	198, 2106
MscI	TGGCCA	1 cut(s)	830
MseI	TTAA	8 cut(s)	267, 671, 777, 806, 992, 1557, 1776, 1817
MslI	CAYNNNNRTG	2 cut(s)	1305, 2022
Msp20I	TGGCCA	1 cut(s)	830
MspA1I	CMGCKG	1 cut(s)	309
MspI	CCGG	3 cut(s)	222, 359, 400
MspR9I	CCNGG	1 cut(s)	359
MunI	CAATTG	2 cut(s)	645, 1075
MvnI	CGCG	2 cut(s)	309, 1629
MwoI	GCNNNNNNNGC	4 cut(s)	231, 1834, 1903, 2027
NaeI	GCCGGC	1 cut(s)	401
NarI	GGCGCC	1 cut(s)	301
NciI	CCSGG	1 cut(s)	359
NdeI	CATATG	1 cut(s)	931
NgoMIV	GCCGGC	1 cut(s)	399
NlaIV	GGNNCC	5 cut(s)	52, 302, 746, 1015, 1383
NmuCI	GTSAC	3 cut(s)	66, 527, 1277
NruI	TCGCGA	1 cut(s)	1629
NsbI	TGCGCA	1 cut(s)	1995
NspI	RCATGY	2 cut(s)	1828, 2021
PaeI	GCATGC	2 cut(s)	1828, 2021
PagI	TCATGA	1 cut(s)	1537
PciSI	GCTCTTC	2 cut(s)	405, 698
PcsI	WCGNNNNNNNCGW	1 cut(s)	1120
PdiI	GCCGGC	1 cut(s)	401
PdmI	GAANNNNTTC	2 cut(s)	198, 2106
PfeI	GAWTC	5 cut(s)	205, 211, 1296, 1865, 1876
PflFI	GACNNNGTC	1 cut(s)	89
PkrI	GCNGC	4 cut(s)	756, 976, 1908, 2098
Ple19I	CGATCG	1 cut(s)	1291
PleI	GAGTC	4 cut(s)	26, 32, 926, 1278
PluTI	GGCGCC	1 cut(s)	304
PmaCI	CACGTG	1 cut(s)	2024
PmlI	CACGTG	1 cut(s)	2024
PpsI	GAGTC	4 cut(s)	26, 32, 926, 1278
Ppu21I	YACGTR	1 cut(s)	2024
PpuMI	RGGWCCY	1 cut(s)	1382
PsiI	TTATAA	1 cut(s)	726
Psp124BI	GAGCTC	1 cut(s)	1160
Psp5II	RGGWCCY	1 cut(s)	1382
PspCI	CACGTG	1 cut(s)	2024
PspFI	CCCAGC	1 cut(s)	941
PspN4I	GGNNCC	5 cut(s)	52, 302, 746, 1015, 1383
PspPI	GGNCC	4 cut(s)	51, 1013, 1382, 1443
PspPPI	RGGWCCY	1 cut(s)	1382
PstI	CTGCAG	1 cut(s)	2101
PstNI	CAGNNNCTG	2 cut(s)	208, 1046
PsuI	RGATCY	3 cut(s)	744, 1482, 2086
PsyI	GACNNNGTC	1 cut(s)	89
PvuI	CGATCG	1 cut(s)	1291
RruI	TCGCGA	1 cut(s)	1629
RsaI	GTAC	6 cut(s)	13, 509, 547, 1097, 1188, 1687
RsaNI	GTAC	6 cut(s)	12, 508, 546, 1096, 1187, 1686
RseI	CAYNNNNRTG	2 cut(s)	1305, 2022
SacI	GAGCTC	1 cut(s)	1160
SacII	CCGCGG	1 cut(s)	310
SapI	GCTCTTC	2 cut(s)	405, 698
SaqAI	TTAA	8 cut(s)	267, 671, 777, 806, 992, 1557, 1776, 1817
SatI	GCNGC	4 cut(s)	755, 975, 1907, 2097
Sau96I	GGNCC	4 cut(s)	51, 1013, 1382, 1443
SchI	GAGTC	4 cut(s)	26, 33, 927, 1278
ScrFI	CCNGG	1 cut(s)	359
SduI	GDGCHC	2 cut(s)	627, 1160
SfaNI	GCATC	6 cut(s)	85, 766, 928, 1297, 1320, 1741
SfcI	CTRYAG	1 cut(s)	2097
SfoI	GGCGCC	1 cut(s)	302
Sfr303I	CCGCGG	1 cut(s)	310
SgrAI	CRCCGGYG	1 cut(s)	399
SgrBI	CCGCGG	1 cut(s)	310
SinI	GGWCC	3 cut(s)	51, 1382, 1443
SmiI	ATTTAAAT	1 cut(s)	993
SmiMI	CAYNNNNRTG	2 cut(s)	1305, 2022
SmlI	CTYRAG	3 cut(s)	710, 1001, 2090
SmoI	CTYRAG	3 cut(s)	710, 1001, 2090
SphI	GCATGC	2 cut(s)	1828, 2021
SsiI	CCGC	8 cut(s)	234, 307, 309, 367, 593, 977, 1275, 2030
SspDI	GGCGCC	1 cut(s)	300
SspMI	CTAG	5 cut(s)	9, 29, 36, 297, 1215
SstI	GAGCTC	1 cut(s)	1160
StyD4I	CCNGG	1 cut(s)	357
StyI	CCWWGG	1 cut(s)	883
SwaI	ATTTAAAT	1 cut(s)	993
TaaI	ACNGT	4 cut(s)	262, 1709, 1946, 1973
TaiI	ACGT	3 cut(s)	567, 1178, 2026
TaqI	TCGA	9 cut(s)	93, 480, 570, 916, 1114, 1256, 1287, 1291, 2115
TaqII	GACCGA	1 cut(s)	147
TatI	WGTACW	4 cut(s)	11, 507, 1095, 1186
TfiI	GAWTC	5 cut(s)	205, 211, 1296, 1865, 1876
Tru1I	TTAA	8 cut(s)	267, 671, 777, 806, 992, 1557, 1776, 1817
Tru9I	TTAA	8 cut(s)	267, 671, 777, 806, 992, 1557, 1776, 1817
TscAI	CASTG	3 cut(s)	616, 915, 1639
TseFI	GTSAC	3 cut(s)	66, 527, 1277
TseI	GCWGC	4 cut(s)	754, 974, 1906, 2096
Tsp45I	GTSAC	3 cut(s)	66, 527, 1277
TspDTI	ATGAA	8 cut(s)	330, 381, 963, 1153, 1383, 1666, 2021, 2035
TspGWI	ACGGA	1 cut(s)	1456
TspRI	CASTG	3 cut(s)	616, 915, 1639
Tth111I	GACNNNGTC	1 cut(s)	89
VpaK11BI	GGWCC	3 cut(s)	51, 1382, 1443
XagI	CCTNNNNNAGG	1 cut(s)	1778
XapI	RAATTY	7 cut(s)	449, 635, 653, 1139, 1802, 1958, 2102
XceI	RCATGY	2 cut(s)	1828, 2021
XcmI	CCANNNNNNNNNTGG	1 cut(s)	423
XmnI	GAANNNNTTC	2 cut(s)	198, 2106
XspI	CTAG	5 cut(s)	9, 29, 36, 297, 1215

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.