Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000563

Physical Location & Seq

Genomic Coordinates Reverse (-)

30280723 .. 30284101

Gene Structure 3379 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g30870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGGAGAATCTGATACGCCGTCTAAACATTGATGAGTTCTGCAACAGGAACTCTCCAAAGCCTCAGTTTGAAGTTGTGCATGATTATTATCCTAACGACGACTATAGTCCAGATACAACAATTCCGCGCTATATGCAGTCTATTGTTGTGGGCTCCAAAGTGTACATGCTTGGTGGTGAATCCACAAGAACGTCTGACAATGATTCTGATGATGACGATTCCGGCGACGGTGAAATAAATAATCCTGAAGATGATGCTGATAACCGTGAAAGACGTCGGCGTGATAATTCTCGTGTGCCTAATTTAGATGTTTTTGCCTTTGATCCTAATGCTTCAGATGGTCCAACCATCAGTCTCAGCGACGGCCGTACCATTCCGAGGAGGATAATTGATCCAAAGACCTTGTCTGGTCCTATAGCTTTCACCCTTGAGAACAAAATCTATGTTATGGCAAGAGCCACCCTCCCGACTCCTCCCCACTGTGATTATGGTAACGAGCCATGCTGTTTTTACTGTACTTGGGGTCATAAACTTTTAGTCCGCCATAATCAGCGCCGTCACCTTTTTGACACTCACCAAGAGAAATGGGAAGATTTGCCGAGGGAAGAAGGAGACGAACTTTTGTTTGATACGGCTGCTGTAGAACTCGAGGGCTTTTTGATTGGTGTAAAAAGCCATCGGCTAGGTGTTTATAAGTTGGATGAGAATGGTAAGCCAAAGCTATATCGAGACCTTCATGAGCTTAAGGGGATATTCTGTCCTTTTTTACTCGTCGGTAACCGTAGGTGTGCTATGGGCAAGTGTGATGGTGGCCGATTGTGGGTGGCTTATTCCGGCAAGGCTATTATGGACGCTCATTATACACGTGTAGCTGTGTTTCATGTATCCATCTCCGACGACCTCGATGGCAATCCGGTCATCTCCGCCGAACTCGAGGCCGCGGAGTTTTACTTCTTCCGAAGTTGTCCTAGACTTGACTCAGCTTTTTCGATGTGCCATCCTTCAAACAATGGTGATATTGAGGAGAAAAACTTGTGTGGGACAATTCTAGAACATGATCATCCTCGAGGCCAGATACATGATGGACGATCGGATATGCAAGCGCCAAAGAAGGATTGTCCAGATACAACTATTCCGCAGGAAATGGAACCTCTTGTTGTGGATTCCAAAGTGTACATGTTTGGTGGTGAATCCAGAAGAACTTGTGACCCTGAAAGCAATGATGATGATGATGATGACGACGACGACGACGATTCCGGCGACGGTGAACTAACTAATTCTGAAGATGATGATTATCGTGAAAGACGTCAGTATTATAATTCTTCTCGTGTGCCCAACTTAGATGTTTTTGCCTTTAATCCTAATGCTTCGGAGGGTCCAACCATCAGTCTCAGCGACGGCAGTACTATTCCGAAAAGAATAATTGATCCGAGATTGATTGACTCAAAGACCTTGTCTGGTCCTATAGTTTTCACCGTTGAGAACAAAATCTATGTTCTGGCAAGAGCATTGTACTTGGGAGACGAGGAAGACATTGATCATCAGCCACCCCTATTCAAGGTTTTTGATCCCCTTCATCAATTCTGGAAAGAGCTCCCCCCTCCTTATTATGGTAATGACTCATTCTTTTGTCACTTTAATTGGGGTAACAATCTTGCAGTCCACAAAAGTATACGTGGTTCATACCTTTTTGACACTCACCAAGAGAAATGGGAAGATTTGTCAAGGGAAAAAGCAGACGAACTTGAGTTTGATACGGCTCTTGTAGAATTCGAGGGCTTTTTGATCGGTGTAAAACGCCATCGGATCGGTGTCTACAAGTTGGATGAGAATGGTATGCCAAAGCTGTGTCGAGAACTGCATGAGCTTGAGGGGATTTTCTGTCCTTTTTTATTCGACGGTAACCGTGGTGTTATGGGCAAGTGCGATGGTGGACGACCGTGGTTGGTGTATACCGGCAAGGATTTTTCGGACTCTGATTCTAGACGTGTAGCTGTGTTTCGAGTTTCCATCTCCAACGACCTTGATGGCAATCCGGTTATCTCTGCCGAACTCGAGGCCGCCGAGCCTTGTCGAGCCAAGTTTGTGGGTGGTGATCGGAGGCGCTTTGGGATGCGCAGGGCCAGAATGGAGGCATGTGGATCTCGATTTCAAGCGGGTTGGGTCAAATCTTTGATCAGATTTTGTAAGTCTAGCAAGAGAGACTTGGTATCTAATTGGGCTCTCGAAGTTTCTAGCGAGAGGAGAGGGTCAGTGGCAGTCAATGGGTTGTCATGGATGGCAGGCGATGATGACTTGACAGATGGCGACGACATCTTCTGCTGGTCCGACAATGGGTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006479 GO:0006807 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008757 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016278 GO:0016279 GO:0016740 GO:0016741 GO:0018022 GO:0018023 GO:0018026 GO:0018193 GO:0018205 GO:0019538 GO:0032259 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rubis-subs-bind SET

Protein Analysis

781

Amino Acids

88.67

Weight (kDa)

4.86

Isoelectric Point (pI)

43.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000563)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40701 FvH4_3g40701 FvH4_3g42210 FvH4_4g30821 FvH4_4g30830 FvH4_4g30861 FvH4_4g30870 FvH4_4g30880 FvH4_4g30890 FvH4_6g30071 FvH4_6g44331 FvH4_6g44332 FvH4_6g44333
malus_domestica	MD15G1041200.v1.1 MD15G1041700.v1.1 MD15G1401000.v1.1
prunus_persica	Prupe.5G008800_v2.0.a1 Prupe.5G157900_v2.0.a1
pyrus_communis	pycom05g01010 pycom15g03820 pycom15g03830 pycom15g03850 pycom15g04240
rosa_chinensis	RchiOBHm_Chr5g0075231
rosa_laevigata	RLG00000008231 RLG00000008232 RLG00000008235 RLG00000008239 RLG00000008240 RLG00000008241 RLG00000021260 RLG00000021269 RLG00000036539 RLG00000036540 RLG00000037046
rosa_multiflora	Rmu_sc0000955.1_g000047 Rmu_sc0006420.1_g000034
rosa_roxburghii	Rroxscaffold_1G00000870 Rroxscaffold_1G00000880 Rroxscaffold_1G00006320 Rroxscaffold_2G00088990 Rroxscaffold_2G00089000 Rroxscaffold_2G00089010 Rroxscaffold_2G00089100 Rroxscaffold_5G00357190 Rroxscaffold_5G00357200
rosa_rugosa	Rorug04G0118300 Rorug04G0118400 Rorug05G0437400 Rorug05G0439900
rosa_samantha	Rh2AG552900 Rh2AG553000 Rh2BG566800 Rh2CG536900 Rh2DG575800 Rh2DG575900 Rh4AG177300 Rh4AG177400 Rh4AG178100 Rh4AG178300 Rh4AG178400 Rh4AG178500 Rh4BG177100 Rh4BG177200 Rh4BG177700 Rh4CG188300 Rh4CG188700 Rh4CG188800 Rh4CG189000 Rh4CG189100 Rh5AG494400 Rh5AG497000 Rh5AG537400 Rh5BG515800 Rh5BG515900 Rh5BG516000 Rh5CG539600 Rh5CG539700 Rh5CG539800 Rh5DG528600 Rh5DG528700
rosa_wichuraiana	Rw2G045740 Rw4G014830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	693, 1317
AatII	GACGTC	2 cut(s)	277, 1309
AbsI	CCTCGAGG	1 cut(s)	1065
Acc16I	TGCGCA	1 cut(s)	2117
AccI	GTMKAC	3 cut(s)	1672, 1815, 1952
AccII	CGCG	2 cut(s)	127, 941
AciI	CCGC	8 cut(s)	125, 541, 924, 939, 941, 1136, 2061, 2156
AclWI	GGATC	6 cut(s)	317, 386, 1421, 1562, 1814, 2149
AcoI	YGGCCR	2 cut(s)	364, 811
AcsI	RAATTY	1 cut(s)	1769
AcuI	CTGAAG	3 cut(s)	267, 318, 1302
AcvI	CACGTG	1 cut(s)	866
AcyI	GRCGYC	2 cut(s)	274, 1306
AfaI	GTAC	6 cut(s)	164, 370, 517, 1175, 1405, 1514
AfiI	CCNNNNNNNGG	5 cut(s)	378, 820, 1558, 1610, 2334
AflII	CTTAAG	1 cut(s)	743
AflIII	ACRYGT	4 cut(s)	863, 865, 1176, 1987
AgsI	TTSAA	4 cut(s)	71, 1005, 1558, 2153
AjiI	CACGTC	1 cut(s)	1988
AluBI	AGCT	9 cut(s)	419, 721, 742, 872, 983, 1594, 1846, 1867, 1994
AluI	AGCT	9 cut(s)	419, 721, 742, 872, 983, 1594, 1846, 1867, 1994
Alw21I	GWGCWC	1 cut(s)	1596
Alw26I	GTCTC	6 cut(s)	359, 606, 723, 1394, 1515, 2196
AlwI	GGATC	6 cut(s)	317, 386, 1421, 1562, 1814, 2149
Ama87I	CYCGRG	4 cut(s)	647, 932, 1065, 2054
AoxI	GGCC	6 cut(s)	364, 811, 936, 1069, 2058, 2121
ApeKI	GCWGC	1 cut(s)	635
ApoI	RAATTY	1 cut(s)	1769
ArsI	GACNNNNNNTTYG	4 cut(s)	389, 421, 1439, 1471
AspLEI	GCGC	5 cut(s)	129, 555, 1105, 2106, 2118
AspS9I	GGNCC	6 cut(s)	341, 410, 1376, 1460, 2121, 2325
AvaI	CYCGRG	4 cut(s)	647, 932, 1065, 2054
AvaII	GGWCC	5 cut(s)	341, 410, 1376, 1460, 2325
BaeGI	GKGCMC	1 cut(s)	1335
BaeI	ACNNNNGTAYC	2 cut(s)	352, 385
BanII	GRGCYC	3 cut(s)	155, 1596, 2224
BauI	CACGAG	2 cut(s)	291, 1326
BbrPI	CACGTG	1 cut(s)	866
BbsI	GAAGAC	1 cut(s)	1536
Bbv12I	GWGCWC	1 cut(s)	1596
BbvI	GCAGC	1 cut(s)	622
BceAI	ACGGC	7 cut(s)	3, 351, 379, 540, 648, 1414, 1773
BciVI	GTATCC	1 cut(s)	895
BclI	TGATCA	3 cut(s)	1057, 1537, 2175
BcoDI	GTCTC	6 cut(s)	359, 606, 723, 1394, 1515, 2196
BfaI	CTAG	6 cut(s)	683, 969, 1049, 1983, 2193, 2235
BfmI	CTRYAG	4 cut(s)	103, 414, 639, 1464
BfoI	RGCGCY	3 cut(s)	556, 1106, 2107
BfrI	CTTAAG	1 cut(s)	743
BfuI	GTATCC	1 cut(s)	895
BisI	GCNGC	3 cut(s)	636, 939, 2061
BlsI	GCNGC	3 cut(s)	637, 940, 2062
BmcAI	AGTACT	1 cut(s)	1405
Bme18I	GGWCC	5 cut(s)	341, 410, 1376, 1460, 2325
BmeT110I	CYCGRG	4 cut(s)	647, 932, 1065, 2054
BmgBI	CACGTC	1 cut(s)	1988
BmgT120I	GGNCC	6 cut(s)	341, 410, 1376, 1460, 2121, 2325
BmiI	GGNNCC	3 cut(s)	154, 1149, 1377
BmsI	GCATC	2 cut(s)	244, 2103
BoxI	GACNNNNGTC	1 cut(s)	105
BpiI	GAAGAC	1 cut(s)	1536
BplI	GAGNNNNNCTC	2 cut(s)	447, 479
BpuEI	CTTGAG	3 cut(s)	449, 1766, 1889
BsaAI	YACGTR	2 cut(s)	866, 1676
BsaBI	GATNNNNATC	4 cut(s)	87, 909, 1293, 2031
BsaHI	GRCGYC	2 cut(s)	274, 1306
BsaI	GGTCTC	1 cut(s)	723
BsaJI	CCNNGG	5 cut(s)	377, 599, 939, 1906, 1940
BsaWI	WCCGGW	2 cut(s)	913, 2035
Bsc4I	CCNNNNNNNGG	5 cut(s)	378, 820, 1558, 1610, 2334
Bse118I	RCCGGY	1 cut(s)	1955
Bse3DI	GCAATG	1 cut(s)	1225
Bse8I	GATNNNNATC	4 cut(s)	87, 909, 1293, 2031
BseDI	CCNNGG	5 cut(s)	377, 599, 939, 1906, 1940
BseGI	GGATG	6 cut(s)	706, 997, 1060, 1831, 2118, 2283
BseJI	GATNNNNATC	4 cut(s)	87, 909, 1293, 2031
BseLI	CCNNNNNNNGG	5 cut(s)	378, 820, 1558, 1610, 2334
BseMI	GCAATG	1 cut(s)	1225
BseMII	CTCAG	4 cut(s)	77, 370, 993, 1405
BseRI	GAGGAG	4 cut(s)	394, 462, 1037, 2257
BseSI	GKGCMC	1 cut(s)	1335
BseX3I	CGGCCG	1 cut(s)	364
BseXI	GCAGC	1 cut(s)	622
Bsh1236I	CGCG	2 cut(s)	127, 941
Bsh1285I	CGRYCG	3 cut(s)	367, 1091, 1940
BshFI	GGCC	6 cut(s)	366, 813, 938, 1071, 2060, 2123
BsiEI	CGRYCG	3 cut(s)	367, 1091, 1940
BsiHKAI	GWGCWC	1 cut(s)	1596
BsiHKCI	CYCGRG	4 cut(s)	647, 932, 1065, 2054
BsiSI	CCGG	6 cut(s)	222, 834, 914, 1257, 1956, 2036
BslFI	GGGAC	1 cut(s)	1054
BslI	CCNNNNNNNGG	5 cut(s)	378, 820, 1558, 1610, 2334
BsmAI	GTCTC	6 cut(s)	359, 606, 723, 1394, 1515, 2196
BsmBI	CGTCTC	2 cut(s)	606, 1515
BsmFI	GGGAC	1 cut(s)	1054
BsnI	GGCC	6 cut(s)	366, 813, 938, 1071, 2060, 2123
Bso31I	GGTCTC	1 cut(s)	723
BsoBI	CYCGRG	4 cut(s)	647, 932, 1065, 2054
Bsp1286I	GDGCHC	4 cut(s)	155, 1335, 1596, 2224
Bsp1407I	TGTACA	2 cut(s)	162, 1173
BspACI	CCGC	8 cut(s)	125, 541, 924, 939, 941, 1136, 2061, 2156
BspANI	GGCC	6 cut(s)	366, 813, 938, 1071, 2060, 2123
BspCNI	CTCAG	4 cut(s)	76, 369, 992, 1404
BspFNI	CGCG	2 cut(s)	127, 941
BspHI	TCATGA	1 cut(s)	736
BspLI	GGNNCC	3 cut(s)	154, 1149, 1377
BspPI	GGATC	6 cut(s)	317, 386, 1421, 1562, 1814, 2149
BspTI	CTTAAG	1 cut(s)	743
BspTNI	GGTCTC	1 cut(s)	723
BsrDI	GCAATG	1 cut(s)	1225
BsrFI	RCCGGY	1 cut(s)	1955
BsrGI	TGTACA	2 cut(s)	162, 1173
BssAI	RCCGGY	1 cut(s)	1955
BssECI	CCNNGG	5 cut(s)	377, 599, 939, 1906, 1940
BssNAI	GTATAC	2 cut(s)	1673, 1953
BssNI	GRCGYC	2 cut(s)	274, 1306
BssSI	CACGAG	2 cut(s)	291, 1326
Bst1107I	GTATAC	2 cut(s)	1673, 1953
Bst2BI	CACGAG	2 cut(s)	291, 1326
BstACI	GRCGYC	2 cut(s)	274, 1306
BstAFI	CTTAAG	1 cut(s)	743
BstAUI	TGTACA	2 cut(s)	162, 1173
BstBAI	YACGTR	2 cut(s)	866, 1676
BstC8I	GCNNGC	2 cut(s)	1101, 2284
BstDEI	CTNAG	5 cut(s)	63, 356, 979, 1339, 1391
BstDSI	CCRYGG	3 cut(s)	939, 1906, 1940
BstEII	GGTNACC	2 cut(s)	776, 1901
BstENI	CCTNNNNNAGG	1 cut(s)	1556
BstF5I	GGATG	6 cut(s)	706, 997, 1060, 1831, 2118, 2283
BstFNI	CGCG	2 cut(s)	127, 941
BstH2I	RGCGCY	3 cut(s)	556, 1106, 2107
BstHHI	GCGC	5 cut(s)	129, 555, 1105, 2106, 2118
BstMAI	GTCTC	6 cut(s)	359, 606, 723, 1394, 1515, 2196
BstMCI	CGRYCG	3 cut(s)	367, 1091, 1940
BstMWI	GCNNNNNNNGC	1 cut(s)	133
BstNSI	RCATGY	3 cut(s)	169, 1180, 2139
BstPAI	GACNNNNGTC	1 cut(s)	105
BstPI	GGTNACC	2 cut(s)	776, 1901
BstSFI	CTRYAG	4 cut(s)	103, 414, 639, 1464
BstSLI	GKGCMC	1 cut(s)	1335
BstUI	CGCG	2 cut(s)	127, 941
BstV1I	GCAGC	1 cut(s)	622
BstV2I	GAAGAC	1 cut(s)	1536
BstX2I	RGATCY	1 cut(s)	2141
BstXI	CCANNNNNNTGG	1 cut(s)	2086
BstYI	RGATCY	1 cut(s)	2141
BstZ17I	GTATAC	2 cut(s)	1673, 1953
BstZI	CGGCCG	1 cut(s)	364
BsuI	GTATCC	1 cut(s)	895
BsuRI	GGCC	6 cut(s)	366, 813, 938, 1071, 2060, 2123
BtgI	CCRYGG	3 cut(s)	939, 1906, 1940
BtgZI	GCGATG	2 cut(s)	1941, 2301
BtrI	CACGTC	1 cut(s)	1988
BtsCI	GGATG	6 cut(s)	706, 997, 1060, 1831, 2118, 2283
BtsIMutI	CAGTG	2 cut(s)	478, 2259
Cac8I	GCNNGC	2 cut(s)	1101, 2284
CciI	TCATGA	1 cut(s)	736
CfoI	GCGC	5 cut(s)	129, 555, 1105, 2106, 2118
Cfr10I	RCCGGY	1 cut(s)	1955
Cfr13I	GGNCC	6 cut(s)	341, 410, 1376, 1460, 2121, 2325
Cfr42I	CCGCGG	1 cut(s)	942
CseI	GACGC	1 cut(s)	860
Csp6I	GTAC	6 cut(s)	163, 369, 516, 1174, 1404, 1513
CviQI	GTAC	6 cut(s)	163, 369, 516, 1174, 1404, 1513
DdeI	CTNAG	5 cut(s)	63, 356, 979, 1339, 1391
EaeI	YGGCCR	2 cut(s)	364, 811
EagI	CGGCCG	1 cut(s)	364
EciI	GGCGGA	2 cut(s)	530, 913
Ecl136II	GAGCTC	1 cut(s)	1594
EclXI	CGGCCG	1 cut(s)	364
Eco24I	GRGCYC	3 cut(s)	155, 1596, 2224
Eco31I	GGTCTC	1 cut(s)	723
Eco47I	GGWCC	5 cut(s)	341, 410, 1376, 1460, 2325
Eco52I	CGGCCG	1 cut(s)	364
Eco53kI	GAGCTC	1 cut(s)	1594
Eco57I	CTGAAG	3 cut(s)	267, 318, 1302
Eco72I	CACGTG	1 cut(s)	866
Eco88I	CYCGRG	4 cut(s)	647, 932, 1065, 2054
Eco91I	GGTNACC	2 cut(s)	776, 1901
EcoICRI	GAGCTC	1 cut(s)	1594
EcoNI	CCTNNNNNAGG	1 cut(s)	1556
EcoO65I	GGTNACC	2 cut(s)	776, 1901
EcoRI	GAATTC	1 cut(s)	1769
EcoT38I	GRGCYC	3 cut(s)	155, 1596, 2224
Esp3I	CGTCTC	2 cut(s)	606, 1515
FalI	AAGNNNNNCTT	2 cut(s)	2189, 2221
FaqI	GGGAC	1 cut(s)	1054
FauI	CCCGC	1 cut(s)	2149
FbaI	TGATCA	3 cut(s)	1057, 1537, 2175
FblI	GTMKAC	3 cut(s)	1672, 1815, 1952
Fnu4HI	GCNGC	3 cut(s)	636, 939, 2061
FokI	GGATG	6 cut(s)	713, 984, 1047, 1838, 2125, 2290
FriOI	GRGCYC	3 cut(s)	155, 1596, 2224
Fsp4HI	GCNGC	3 cut(s)	636, 939, 2061
FspBI	CTAG	6 cut(s)	683, 969, 1049, 1983, 2193, 2235
FspI	TGCGCA	1 cut(s)	2117
GlaI	GCGC	5 cut(s)	128, 554, 1104, 2105, 2117
GluI	GCNGC	3 cut(s)	636, 939, 2061
HaeII	RGCGCY	3 cut(s)	556, 1106, 2107
HaeIII	GGCC	6 cut(s)	366, 813, 938, 1071, 2060, 2123
HapII	CCGG	6 cut(s)	222, 834, 914, 1257, 1956, 2036
HgaI	GACGC	1 cut(s)	860
HhaI	GCGC	5 cut(s)	129, 555, 1105, 2106, 2118
Hin1I	GRCGYC	2 cut(s)	274, 1306
Hin6I	GCGC	5 cut(s)	127, 553, 1103, 2104, 2116
HinP1I	GCGC	5 cut(s)	127, 553, 1103, 2104, 2116
HpaII	CCGG	6 cut(s)	222, 834, 914, 1257, 1956, 2036
Hpy166II	GTNNAC	8 cut(s)	163, 1174, 1268, 1663, 1673, 1816, 1934, 1953
Hpy8I	GTNNAC	8 cut(s)	163, 1174, 1268, 1663, 1673, 1816, 1934, 1953
HpyAV	CCTTC	5 cut(s)	602, 743, 1011, 1105, 1583
HpyCH4IV	ACGT	6 cut(s)	191, 274, 865, 1306, 1675, 1987
HpyCH4V	TGCA	6 cut(s)	42, 79, 136, 1099, 1658, 1861
HpyF10VI	GCNNNNNNNGC	1 cut(s)	133
HpyF3I	CTNAG	5 cut(s)	63, 356, 979, 1339, 1391
HpySE526I	ACGT	6 cut(s)	191, 274, 865, 1306, 1675, 1987
Hsp92I	GRCGYC	2 cut(s)	274, 1306
HspAI	GCGC	5 cut(s)	127, 553, 1103, 2104, 2116
Ksp22I	TGATCA	3 cut(s)	1057, 1537, 2175
KspI	CCGCGG	1 cut(s)	942
LmnI	GCTCC	2 cut(s)	158, 1599
Lsp1109I	GCAGC	1 cut(s)	622
LweI	GCATC	2 cut(s)	244, 2103
MaeI	CTAG	6 cut(s)	683, 969, 1049, 1983, 2193, 2235
MaeII	ACGT	6 cut(s)	191, 274, 865, 1306, 1675, 1987
MaeIII	GTNAC	7 cut(s)	491, 557, 776, 1205, 1631, 1646, 1901
MflI	RGATCY	1 cut(s)	2141
MhlI	GDGCHC	4 cut(s)	155, 1335, 1596, 2224
MlyI	GAGTC	5 cut(s)	463, 971, 1436, 1613, 1967
MmeI	TCCRAC	6 cut(s)	368, 678, 918, 1403, 1803, 2040
MseI	TTAA	3 cut(s)	744, 1356, 1638
MspA1I	CMGCKG	1 cut(s)	941
MspCI	CTTAAG	1 cut(s)	743
MspI	CCGG	6 cut(s)	222, 834, 914, 1257, 1956, 2036
MvnI	CGCG	2 cut(s)	127, 941
MwoI	GCNNNNNNNGC	1 cut(s)	133
NlaIV	GGNNCC	3 cut(s)	154, 1149, 1377
NmeAIII	GCCGAG	2 cut(s)	624, 2089
NmuCI	GTSAC	3 cut(s)	557, 1205, 1631
NsbI	TGCGCA	1 cut(s)	2117
NspI	RCATGY	3 cut(s)	169, 1180, 2139
PaeR7I	CTCGAG	4 cut(s)	647, 932, 1065, 2054
PagI	TCATGA	1 cut(s)	736
PciI	ACATGT	1 cut(s)	1176
PcsI	WCGNNNNNNNCGW	6 cut(s)	222, 1245, 1248, 1257, 1303, 2061
PfeI	GAWTC	8 cut(s)	7, 179, 203, 218, 1163, 1190, 1253, 1979
PflFI	GACNNNGTC	2 cut(s)	403, 1453
PkrI	GCNGC	3 cut(s)	637, 940, 2062
Ple19I	CGATCG	1 cut(s)	1091
PleI	GAGTC	5 cut(s)	463, 971, 1436, 1613, 1967
PmaCI	CACGTG	1 cut(s)	866
PmlI	CACGTG	1 cut(s)	866
PpsI	GAGTC	5 cut(s)	463, 971, 1436, 1613, 1967
Ppu21I	YACGTR	2 cut(s)	866, 1676
PscI	ACATGT	1 cut(s)	1176
PshAI	GACNNNNGTC	1 cut(s)	105
PsiI	TTATAA	2 cut(s)	693, 1317
Psp124BI	GAGCTC	1 cut(s)	1596
PspCI	CACGTG	1 cut(s)	866
PspEI	GGTNACC	2 cut(s)	776, 1901
PspN4I	GGNNCC	3 cut(s)	154, 1149, 1377
PspPI	GGNCC	6 cut(s)	341, 410, 1376, 1460, 2121, 2325
PspXI	VCTCGAGB	4 cut(s)	647, 932, 1065, 2054
PsrI	GAACNNNNNNTAC	2 cut(s)	1663, 1695
PsuI	RGATCY	1 cut(s)	2141
PsyI	GACNNNGTC	2 cut(s)	403, 1453
PvuI	CGATCG	1 cut(s)	1091
RsaI	GTAC	6 cut(s)	164, 370, 517, 1175, 1405, 1514
RsaNI	GTAC	6 cut(s)	163, 369, 516, 1174, 1404, 1513
SacI	GAGCTC	1 cut(s)	1596
SacII	CCGCGG	1 cut(s)	942
SaqAI	TTAA	3 cut(s)	744, 1356, 1638
SatI	GCNGC	3 cut(s)	636, 939, 2061
Sau96I	GGNCC	6 cut(s)	341, 410, 1376, 1460, 2121, 2325
ScaI	AGTACT	1 cut(s)	1405
SchI	GAGTC	5 cut(s)	463, 971, 1436, 1613, 1967
SduI	GDGCHC	4 cut(s)	155, 1335, 1596, 2224
SfaNI	GCATC	2 cut(s)	244, 2103
SfcI	CTRYAG	4 cut(s)	103, 414, 639, 1464
Sfr274I	CTCGAG	4 cut(s)	647, 932, 1065, 2054
Sfr303I	CCGCGG	1 cut(s)	942
SgrBI	CCGCGG	1 cut(s)	942
SinI	GGWCC	5 cut(s)	341, 410, 1376, 1460, 2325
SlaI	CTCGAG	4 cut(s)	647, 932, 1065, 2054
SmlI	CTYRAG	8 cut(s)	428, 647, 743, 932, 1065, 1745, 1868, 2054
SmoI	CTYRAG	8 cut(s)	428, 647, 743, 932, 1065, 1745, 1868, 2054
SsiI	CCGC	8 cut(s)	125, 541, 924, 939, 941, 1136, 2061, 2156
SspMI	CTAG	6 cut(s)	683, 969, 1049, 1983, 2193, 2235
SstI	GAGCTC	1 cut(s)	1596
TaiI	ACGT	6 cut(s)	194, 277, 868, 1309, 1678, 1990
TatI	WGTACW	5 cut(s)	162, 515, 1173, 1403, 1512
TauI	GCSGC	2 cut(s)	941, 2063
TfiI	GAWTC	8 cut(s)	7, 179, 203, 218, 1163, 1190, 1253, 1979
Tru1I	TTAA	3 cut(s)	744, 1356, 1638
Tru9I	TTAA	3 cut(s)	744, 1356, 1638
TscAI	CASTG	2 cut(s)	485, 2259
TseFI	GTSAC	3 cut(s)	557, 1205, 1631
TseI	GCWGC	1 cut(s)	635
Tsp45I	GTSAC	3 cut(s)	557, 1205, 1631
TspDTI	ATGAA	4 cut(s)	725, 869, 1565, 1671
TspRI	CASTG	2 cut(s)	485, 2259
Tth111I	GACNNNGTC	2 cut(s)	403, 1453
Vha464I	CTTAAG	1 cut(s)	743
VpaK11BI	GGWCC	5 cut(s)	341, 410, 1376, 1460, 2325
XagI	CCTNNNNNAGG	1 cut(s)	1556
XapI	RAATTY	1 cut(s)	1769
XbaI	TCTAGA	2 cut(s)	1048, 1982
XceI	RCATGY	3 cut(s)	169, 1180, 2139
XcmI	CCANNNNNNNNNTGG	2 cut(s)	485, 1079
XhoI	CTCGAG	4 cut(s)	647, 932, 1065, 2054
XmiI	GTMKAC	3 cut(s)	1672, 1815, 1952
XspI	CTAG	6 cut(s)	683, 969, 1049, 1983, 2193, 2235
ZraI	GACGTC	2 cut(s)	275, 1307
ZrmI	AGTACT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.