FvH4_5g11200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
6349075 .. 6350031
957 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11200.t1

Sequence Viewer

Length: 957 bp
ATGGCGGACAAGCTAATCGGGAAACATCTGTACAAGCAGCTCCTTGATGGTGTTAAGGAAGCATTAGGCAGCAGTACAAAGTTTATGTCCCTCCTTGAAGATCTCAGACTGACGCTGGTCTCTCTACAACCACGAATCGCTCAACATGAGCCGGAAATGTATCTCCTGCCAAATGAGGAGACCCGAAATCTCGAGCGGCAAATGGAGGAGGGAGTGAAGCTAGTTCGCCGGCTATCGAGTCTTGGCATGTGGAACTATCACTGCATGAGGCGAAGCTACTCCGACCAACTTGCCGAATTGTTCAGGTCTCTTAGAAGAGTGTTGTACATTCTAAAGCTGCAGGAAGAGAGACATACAAATGAGATCTTGTTTGTTGCAAGGAACATTCGCGACAGACAAAATGACCTGGAAAGAAGGTTATGTGGTTTACTAAAAGTGACGCTGGAGGAGCAGAACGAAGGCAATGGTCAGGTGAAAAATGGAGGAGGGGCTGGTCAGGATCTGGAGCAAGTGTTTTGCCGTTTGCTTGAACTCTTGGTTTTGGAAGTCGATGTAGAATTGAATGGTAAAAGGAGCTTCAAACCGGTCTTGGTTGATCTCAAATCCACGGCTAGTTCCTTCCAACCACTGATACAAGAGATATCACAGCTTAACAACATACTGCATCTATCAAAGGAGGAACTGGAAAATCTGAGGGAACAATTGCAGAAAGGTATCGAGCTTGTTGACAAGTGCTCGAAGGTACCTCGAGGGGAGAGCTACAAAAGGTATGAATACTTCGAAAGACTTCTGGAGTTGGATGATTATCTTCGAGGATTGTTATGTATGATGAGGGAGCAGGTAGCCAAGGATATGAAGGAGACTTTGCTTTCTGTATGCAACTTGGAAATGATGCTCACTCGAATTGAAGAGCTACATCTGGCACAAAATCAAATTGATCAACACCCTGCATTGTGA

Protein Analysis

319

Amino Acids

37.14

Weight (kDa)

5.92

Isoelectric Point (pI)

52.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 12 - 124 6.8e-10 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 187 - 298 2.5e-17 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 747
Acc36I ACCTGC 1 cut(s) 829
Acc65I GGTACC 1 cut(s) 742
AccB1I GGYRCC 1 cut(s) 742
AccBSI CCGCTC 1 cut(s) 196
AccII CGCG 1 cut(s) 390
AciI CCGC 2 cut(s) 5, 196
AclWI GGATC 1 cut(s) 507
AfaI GTAC 4 cut(s) 32, 76, 326, 744
AgeI ACCGGT 1 cut(s) 583
AgsI TTSAA 5 cut(s) 98, 530, 562, 580, 908
AjnI CCWGG 1 cut(s) 405
Alw21I GWGCWC 1 cut(s) 737
Alw26I GTCTC 5 cut(s) 124, 173, 312, 343, 854
AlwI GGATC 1 cut(s) 507
AlwNI CAGNNNCTG 1 cut(s) 502
Ama87I CYCGRG 2 cut(s) 191, 747
ApeKI GCWGC 3 cut(s) 37, 69, 337
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
AsiGI ACCGGT 1 cut(s) 583
Asp700I GAANNNNTTC 1 cut(s) 786
Asp718I GGTACC 1 cut(s) 742
AsuHPI GGTGA 1 cut(s) 484
AsuII TTCGAA 1 cut(s) 780
AvaI CYCGRG 2 cut(s) 191, 747
BanI GGYRCC 1 cut(s) 742
BarI GAAGNNNNNNTAC 2 cut(s) 761, 793
Bbv12I GWGCWC 1 cut(s) 737
BbvI GCAGC 3 cut(s) 49, 81, 324
BccI CCATC 1 cut(s) 41
BceAI ACGGC 2 cut(s) 504, 624
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BciT130I CCWGG 1 cut(s) 407
BclI TGATCA 1 cut(s) 937
BcoDI GTCTC 5 cut(s) 124, 173, 312, 343, 854
BfaI CTAG 2 cut(s) 221, 612
BfmI CTRYAG 1 cut(s) 338
BfuAI ACCTGC 1 cut(s) 829
BglII AGATCT 2 cut(s) 100, 363
BisI GCNGC 4 cut(s) 38, 70, 197, 338
BlsI GCNGC 4 cut(s) 39, 71, 198, 339
Bme1390I CCNGG 1 cut(s) 407
BmeT110I CYCGRG 2 cut(s) 191, 747
BmiI GGNNCC 1 cut(s) 744
BmrFI CCNGG 1 cut(s) 407
BmsI GCATC 2 cut(s) 673, 882
BoxI GACNNNNGTC 1 cut(s) 116
BpmI CTGGAG 3 cut(s) 464, 524, 812
Bpu14I TTCGAA 1 cut(s) 780
BsaBI GATNNNNATC 1 cut(s) 804
BsaI GGTCTC 3 cut(s) 124, 173, 312
BsaJI CCNNGG 2 cut(s) 606, 846
BsaWI WCCGGW 1 cut(s) 583
BsaXI ACNNNNNCTCC 2 cut(s) 497, 527
Bse118I RCCGGY 2 cut(s) 228, 583
Bse1I ACTGG 1 cut(s) 687
Bse3DI GCAATG 1 cut(s) 469
Bse8I GATNNNNATC 1 cut(s) 804
BseBI CCWGG 1 cut(s) 407
BseDI CCNNGG 2 cut(s) 606, 846
BseGI GGATG 1 cut(s) 805
BseJI GATNNNNATC 1 cut(s) 804
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 2 cut(s) 118, 683
BseNI ACTGG 1 cut(s) 687
BseRI GAGGAG 4 cut(s) 191, 221, 461, 498
BseXI GCAGC 3 cut(s) 49, 81, 324
Bsh1236I CGCG 1 cut(s) 390
BshNI GGYRCC 1 cut(s) 742
BshTI ACCGGT 1 cut(s) 583
BsiHKAI GWGCWC 1 cut(s) 737
BsiHKCI CYCGRG 2 cut(s) 191, 747
BsiSI CCGG 3 cut(s) 152, 229, 584
BslFI GGGAC 1 cut(s) 73
BsmAI GTCTC 5 cut(s) 124, 173, 312, 343, 854
BsmFI GGGAC 1 cut(s) 73
Bso31I GGTCTC 3 cut(s) 124, 173, 312
BsoBI CYCGRG 2 cut(s) 191, 747
Bsp119I TTCGAA 1 cut(s) 780
Bsp1286I GDGCHC 1 cut(s) 737
Bsp1407I TGTACA 2 cut(s) 30, 324
Bsp143I GATC 5 cut(s) 100, 363, 499, 595, 937
Bsp68I TCGCGA 1 cut(s) 390
BspACI CCGC 2 cut(s) 5, 196
BspCNI CTCAG 2 cut(s) 117, 684
BspFNI CGCG 1 cut(s) 390
BspLI GGNNCC 1 cut(s) 744
BspMAI CTGCAG 1 cut(s) 342
BspMI ACCTGC 1 cut(s) 829
BspPI GGATC 1 cut(s) 507
BspQI GCTCTTC 1 cut(s) 903
BspT104I TTCGAA 1 cut(s) 780
BspT107I GGYRCC 1 cut(s) 742
BspTNI GGTCTC 3 cut(s) 124, 173, 312
BsrBI CCGCTC 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 469
BsrFI RCCGGY 2 cut(s) 228, 583
BsrGI TGTACA 2 cut(s) 30, 324
BsrI ACTGG 1 cut(s) 687
BssAI RCCGGY 2 cut(s) 228, 583
BssECI CCNNGG 2 cut(s) 606, 846
BssMI GATC 5 cut(s) 100, 363, 499, 595, 937
BssT1I CCWWGG 1 cut(s) 846
Bst2UI CCWGG 1 cut(s) 407
Bst6I CTCTTC 3 cut(s) 310, 339, 903
BstAUI TGTACA 2 cut(s) 30, 324
BstBI TTCGAA 1 cut(s) 780
BstC8I GCNNGC 1 cut(s) 230
BstDEI CTNAG 3 cut(s) 104, 311, 692
BstDSI CCRYGG 1 cut(s) 606
BstF5I GGATG 1 cut(s) 805
BstFNI CGCG 1 cut(s) 390
BstKTI GATC 5 cut(s) 103, 366, 502, 598, 940
BstMAI GTCTC 5 cut(s) 124, 173, 312, 343, 854
BstMBI GATC 5 cut(s) 100, 363, 499, 595, 937
BstMWI GCNNNNNNNGC 1 cut(s) 448
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 1 cut(s) 250
BstPAI GACNNNNGTC 1 cut(s) 116
BstSCI CCNGG 1 cut(s) 405
BstSFI CTRYAG 1 cut(s) 338
BstUI CGCG 1 cut(s) 390
BstV1I GCAGC 3 cut(s) 49, 81, 324
BstX2I RGATCY 3 cut(s) 100, 363, 499
BstYI RGATCY 3 cut(s) 100, 363, 499
BtgI CCRYGG 1 cut(s) 606
BtsCI GGATG 1 cut(s) 805
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 2 cut(s) 259, 626
BtuMI TCGCGA 1 cut(s) 390
BveI ACCTGC 1 cut(s) 829
Cac8I GCNNGC 1 cut(s) 230
CaiI CAGNNNCTG 1 cut(s) 502
Cfr10I RCCGGY 2 cut(s) 228, 583
CseI GACGC 2 cut(s) 121, 448
Csp6I GTAC 4 cut(s) 31, 75, 325, 743
CspAI ACCGGT 1 cut(s) 583
CviAII CATG 3 cut(s) 146, 247, 265
CviQI GTAC 4 cut(s) 31, 75, 325, 743
DdeI CTNAG 3 cut(s) 104, 311, 692
DpnI GATC 5 cut(s) 102, 365, 501, 597, 939
DpnII GATC 5 cut(s) 100, 363, 499, 595, 937
Eam1104I CTCTTC 3 cut(s) 310, 339, 903
EarI CTCTTC 3 cut(s) 310, 339, 903
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 846
Eco31I GGTCTC 3 cut(s) 124, 173, 312
Eco32I GATATC 1 cut(s) 642
Eco88I CYCGRG 2 cut(s) 191, 747
EcoRII CCWGG 1 cut(s) 405
EcoRV GATATC 1 cut(s) 642
EcoT14I CCWWGG 1 cut(s) 846
ErhI CCWWGG 1 cut(s) 846
FaeI CATG 3 cut(s) 149, 250, 268
FaqI GGGAC 1 cut(s) 73
FatI CATG 3 cut(s) 145, 246, 264
FbaI TGATCA 1 cut(s) 937
Fnu4HI GCNGC 4 cut(s) 38, 70, 197, 338
FokI GGATG 1 cut(s) 812
Fsp4HI GCNGC 4 cut(s) 38, 70, 197, 338
FspBI CTAG 2 cut(s) 221, 612
GluI GCNGC 4 cut(s) 38, 70, 197, 338
GsuI CTGGAG 3 cut(s) 464, 524, 812
HapII CCGG 3 cut(s) 152, 229, 584
HgaI GACGC 2 cut(s) 121, 448
Hin1II CATG 3 cut(s) 149, 250, 268
HincII GTYRAC 1 cut(s) 727
HindII GTYRAC 1 cut(s) 727
HinfI GANTC 2 cut(s) 135, 238
HpaII CCGG 3 cut(s) 152, 229, 584
HphI GGTGA 1 cut(s) 484
Hpy166II GTNNAC 2 cut(s) 428, 727
Hpy188I TCNGA 3 cut(s) 107, 283, 693
Hpy188III TCNNGA 6 cut(s) 19, 191, 389, 497, 503, 791
Hpy8I GTNNAC 2 cut(s) 428, 727
HpyAV CCTTC 5 cut(s) 408, 452, 628, 733, 850
HpyCH4V TGCA 7 cut(s) 264, 340, 377, 664, 706, 879, 950
HpyF10VI GCNNNNNNNGC 1 cut(s) 448
HpyF3I CTNAG 3 cut(s) 104, 311, 692
Hsp92II CATG 3 cut(s) 149, 250, 268
KpnI GGTACC 1 cut(s) 746
KroI GCCGGC 1 cut(s) 228
KroNI GCCGGC 1 cut(s) 230
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 5 cut(s) 100, 363, 499, 595, 937
LguI GCTCTTC 1 cut(s) 903
LmnI GCTCC 5 cut(s) 45, 448, 505, 573, 835
Lsp1109I GCAGC 3 cut(s) 49, 81, 324
LweI GCATC 2 cut(s) 673, 882
MaeI CTAG 2 cut(s) 221, 612
MaeIII GTNAC 1 cut(s) 436
MalI GATC 5 cut(s) 102, 365, 501, 597, 939
MbiI CCGCTC 1 cut(s) 196
MboI GATC 5 cut(s) 100, 363, 499, 595, 937
MboII GAAGA 5 cut(s) 110, 327, 356, 800, 920
MfeI CAATTG 1 cut(s) 701
MflI RGATCY 3 cut(s) 100, 363, 499
MhlI GDGCHC 1 cut(s) 737
MluCI AATT 5 cut(s) 296, 557, 701, 903, 933
MlyI GAGTC 1 cut(s) 247
MmeI TCCRAC 3 cut(s) 306, 646, 777
MroNI GCCGGC 1 cut(s) 228
MroXI GAANNNNTTC 1 cut(s) 786
MseI TTAA 2 cut(s) 54, 651
MslI CAYNNNNRTG 1 cut(s) 357
MspI CCGG 3 cut(s) 152, 229, 584
MspR9I CCNGG 1 cut(s) 407
MunI CAATTG 1 cut(s) 701
MvaI CCWGG 1 cut(s) 407
MvnI CGCG 1 cut(s) 390
MwoI GCNNNNNNNGC 1 cut(s) 448
NaeI GCCGGC 1 cut(s) 230
NdeII GATC 5 cut(s) 100, 363, 499, 595, 937
NgoMIV GCCGGC 1 cut(s) 228
NlaIII CATG 3 cut(s) 149, 250, 268
NlaIV GGNNCC 1 cut(s) 744
NmuCI GTSAC 1 cut(s) 436
NruI TCGCGA 1 cut(s) 390
NspI RCATGY 1 cut(s) 250
NspV TTCGAA 1 cut(s) 780
PaeR7I CTCGAG 2 cut(s) 191, 747
PciSI GCTCTTC 1 cut(s) 903
PdiI GCCGGC 1 cut(s) 230
PdmI GAANNNNTTC 1 cut(s) 786
PfeI GAWTC 1 cut(s) 135
PinAI ACCGGT 1 cut(s) 583
PkrI GCNGC 4 cut(s) 39, 71, 198, 339
PleI GAGTC 1 cut(s) 246
PpsI GAGTC 1 cut(s) 246
PshAI GACNNNNGTC 1 cut(s) 116
Psp6I CCWGG 1 cut(s) 405
PspGI CCWGG 1 cut(s) 405
PspN4I GGNNCC 1 cut(s) 744
PspXI VCTCGAGB 1 cut(s) 747
PstI CTGCAG 1 cut(s) 342
PstNI CAGNNNCTG 1 cut(s) 502
PsuI RGATCY 3 cut(s) 100, 363, 499
RruI TCGCGA 1 cut(s) 390
RsaI GTAC 4 cut(s) 32, 76, 326, 744
RsaNI GTAC 4 cut(s) 31, 75, 325, 743
RseI CAYNNNNRTG 1 cut(s) 357
SapI GCTCTTC 1 cut(s) 903
SaqAI TTAA 2 cut(s) 54, 651
SatI GCNGC 4 cut(s) 38, 70, 197, 338
Sau3AI GATC 5 cut(s) 100, 363, 499, 595, 937
SchI GAGTC 1 cut(s) 247
ScrFI CCNGG 1 cut(s) 407
SduI GDGCHC 1 cut(s) 737
SfaNI GCATC 2 cut(s) 673, 882
SfcI CTRYAG 1 cut(s) 338
Sfr274I CTCGAG 2 cut(s) 191, 747
SfuI TTCGAA 1 cut(s) 780
SlaI CTCGAG 2 cut(s) 191, 747
SmiMI CAYNNNNRTG 1 cut(s) 357
SmlI CTYRAG 2 cut(s) 191, 747
SmoI CTYRAG 2 cut(s) 191, 747
Sse9I AATT 5 cut(s) 296, 557, 701, 903, 933
SsiI CCGC 2 cut(s) 5, 196
SspMI CTAG 2 cut(s) 221, 612
StyD4I CCNGG 1 cut(s) 405
StyI CCWWGG 1 cut(s) 846
TaqI TCGA 9 cut(s) 192, 236, 549, 717, 737, 748, 780, 811, 901
TasI AATT 5 cut(s) 296, 557, 701, 903, 933
TatI WGTACW 3 cut(s) 30, 74, 324
TauI GCSGC 1 cut(s) 199
TfiI GAWTC 1 cut(s) 135
Tru1I TTAA 2 cut(s) 54, 651
Tru9I TTAA 2 cut(s) 54, 651
TscAI CASTG 2 cut(s) 266, 633
TseFI GTSAC 1 cut(s) 436
TseI GCWGC 3 cut(s) 37, 69, 337
Tsp45I GTSAC 1 cut(s) 436
TspDTI ATGAA 2 cut(s) 786, 869
TspRI CASTG 2 cut(s) 266, 633
XceI RCATGY 1 cut(s) 250
XhoI CTCGAG 2 cut(s) 191, 747
XmnI GAANNNNTTC 1 cut(s) 786
XspI CTAG 2 cut(s) 221, 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.