Rmu_sc0000645.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000645.1
OG0000408
Physical Location & Seq
Reverse (-)
1060 .. 3081
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000645.1_g000001.1.cds

Sequence Viewer

Length: 2022 bp
atgagtctgaactttctgggaggagcaccttttcaactcctatacgatggtgttagggtagccataggtagaactaccaagttcaaagccctcctcttaaatctcgaatcgacgctagactgtttgcaaccacgagtcatccagcagataagagaccataatgtggagctgaatctcccaaacgatataattcaagacctgcaagtgaaaatggatgatggtgtggcactcattgccaatttatctaggcttagcgtgtggaactgtcgcgtatggggggactgttgcaactgcatgaagcctagctatgcagaccaacttgctgcattggataggtctcttagacgactgttggagatactaaagcttgagcagatgaggaacgtggtggagctcttgcttttggcaaggagaagtaatgaccgacaagatgacttggagagaagacagttggaaattctgaaagcgctgcaagaaaccggggatatgttaagagcgcagcaggaagtaatggagagaattgaaaggaatggtgctgcatcttcagacagaggagggtcagctcctgctcctgctctaggaacagtatttagggtgttgtttgatgttgttatcagagtaaaggtcaagaatatgatgtatgagcgaatcctcaaagattttgaatccactcttgaatgcttgaagccacttatagaagagatggtggagtctaacaagttgctgcatctttcaaatgaggaacaagaatatttcataatgcaaatggaaaagggtgtagagttaattcaccagtgctctgaggcttgcaagagaggaataaggtataaaaagtacgaatacaccaagaaacttctgggattggatgcatgtcttcaaaggcttttcattgaactcaaagagcaggtagtaaggaatgtgaaggaggccttggtgcttataagtaacttggaaaaagagatcacagaaattgaaggggttgttgtggtacaaagtgatgaaattgagtgttcgattccagcacctcaaccccgatcacctttagttggagaggatttacaaaatgtgcagataaatcaagaggtgatcgaggctctatgtcccccccttgtattatgtggtttcattaatcaaggcttgagggcaactgcaaccgcacccgcaccggccttcgtttttatagaaaatcaagaggtgatcgaggagacattcgatgcagtaagcaacttagaagaggagatcaaggaaattagagaagttcatgtggtacaaaataatgaagtacaaagtaaaggtcctcaagcttcattgcctacagctggatccagtgtacaaagtatgcagggaacaagggatgtgatcaaggaaagatgggactcggaaaagttgccggatgtcaagcaaattaaagggaaaggcttgttcgaatatccggttgctggtgaatatgaacttccaccatttccagtgggacttgcacaggaacgagaagatcacgctgatgcattcagtaatgcatcattggaagaaccggttgatgaattggatatgcatgtcagctacttgaaacggaagcttttacatggtggtcacttagccattgtgctgacgggacctgaaggatgcgggaaaactagattggcagaaaatttttgtcaagatgaggaagtcatagatgaattcaagaacaatattttcttcgtccctgtttcggaaagccccaaattgcagcttattgttcaaaaactatatccagaggagggttacaggaaaattatgttgccagatgaaaatggagttcatgcaattcagtggctgcaagcatttgttaagcatgtaggacatcctcgttctctgttggtcctagatgatgtctggcctggatctgaatcccttcttgatgagtttgatgaattcaaaaggtcaaatttcaagattctggtgacatcaagattcgaatttccaagatttggttcctcctattatgtaatgacggatgatgtacttagggtaggtagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

673

Amino Acids

76.48

Weight (kDa)

5.02

Isoelectric Point (pI)

57.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 941
Acc36I ACCTGC 2 cut(s) 207, 895
AccB7I CCANNNNNTGG 2 cut(s) 163, 1970
AccII CGCG 1 cut(s) 270
AciI CCGC 3 cut(s) 1155, 1161, 1626
AclWI GGATC 3 cut(s) 1317, 1330, 1891
AcsI RAATTY 6 cut(s) 456, 1648, 1679, 1913, 1927, 1958
AcuI CTGAAG 2 cut(s) 528, 1638
AfaI GTAC 6 cut(s) 836, 990, 1269, 1284, 1332, 2004
AfeI AGCGCT 1 cut(s) 468
AfiI CCNNNNNNNGG 8 cut(s) 163, 578, 1046, 1319, 1439, 1711, 1760, 1970
AgeI ACCGGT 1 cut(s) 1531
AjnI CCWGG 1 cut(s) 1879
AjuI GAANNNNNNNTTGG 6 cut(s) 914, 946, 1622, 1654, 1957, 1989
Alw21I GWGCWC 3 cut(s) 28, 396, 800
Alw26I GTCTC 3 cut(s) 147, 342, 1199
AlwI GGATC 3 cut(s) 1317, 1330, 1891
AlwNI CAGNNNCTG 2 cut(s) 566, 1816
Aor51HI AGCGCT 1 cut(s) 468
AoxI GGCC 3 cut(s) 927, 1167, 1877
ApeKI GCWGC 7 cut(s) 323, 469, 499, 536, 724, 1729, 1816
ApoI RAATTY 6 cut(s) 456, 1648, 1679, 1913, 1927, 1958
ArsI GACNNNNNNTTYG 2 cut(s) 1279, 1311
AseI ATTAAT 1 cut(s) 1128
AsiGI ACCGGT 1 cut(s) 1531
Asp700I GAANNNNTTC 1 cut(s) 1893
AspLEI GCGC 2 cut(s) 469, 499
AspS9I GGNCC 3 cut(s) 1295, 1613, 1861
AsuC2I CCSGG 1 cut(s) 481
AsuHPI GGTGA 6 cut(s) 782, 1029, 1096, 1207, 1454, 1954
AsuII TTCGAA 2 cut(s) 1425, 1956
AvaII GGWCC 3 cut(s) 1295, 1613, 1861
BamHI GGATCC 1 cut(s) 1322
BanII GRGCYC 1 cut(s) 396
BauI CACGAG 1 cut(s) 132
BbsI GAAGAC 2 cut(s) 451, 866
Bbv12I GWGCWC 3 cut(s) 28, 396, 800
BbvI GCAGC 7 cut(s) 310, 456, 511, 523, 711, 1741, 1803
BccI CCATC 4 cut(s) 41, 212, 697, 1365
BciT130I CCWGG 1 cut(s) 1881
BclI TGATCA 1 cut(s) 1359
BcnI CCSGG 1 cut(s) 481
BcoDI GTCTC 3 cut(s) 147, 342, 1199
BfaI CTAG 6 cut(s) 116, 246, 303, 578, 1635, 1865
BfmI CTRYAG 1 cut(s) 1314
BfoI RGCGCY 1 cut(s) 470
BfuAI ACCTGC 2 cut(s) 207, 895
BisI GCNGC 7 cut(s) 324, 470, 500, 537, 725, 1730, 1817
BlpI GCTNAGC 1 cut(s) 251
BlsI GCNGC 7 cut(s) 325, 471, 501, 538, 726, 1731, 1818
Bme1390I CCNGG 2 cut(s) 481, 1881
Bme18I GGWCC 3 cut(s) 1295, 1613, 1861
BmgT120I GGNCC 3 cut(s) 1295, 1613, 1861
BmiI GGNNCC 3 cut(s) 1324, 1614, 1975
BmrFI CCNGG 2 cut(s) 481, 1881
BmsI GCATC 7 cut(s) 548, 736, 856, 1204, 1492, 1526, 1613
BpiI GAAGAC 2 cut(s) 451, 866
Bpu1102I GCTNAGC 1 cut(s) 251
Bpu14I TTCGAA 2 cut(s) 1425, 1956
BpuEI CTTGAG 3 cut(s) 389, 1159, 1284
BpuMI CCSGG 1 cut(s) 481
BsaBI GATNNNNATC 1 cut(s) 1888
BsaI GGTCTC 2 cut(s) 147, 342
BsaJI CCNNGG 2 cut(s) 480, 930
BsaWI WCCGGW 2 cut(s) 1432, 1531
Bsc4I CCNNNNNNNGG 8 cut(s) 163, 578, 1046, 1319, 1439, 1711, 1760, 1970
Bse118I RCCGGY 2 cut(s) 1165, 1531
Bse1I ACTGG 3 cut(s) 793, 1326, 1466
Bse3DI GCAATG 2 cut(s) 231, 1307
Bse8I GATNNNNATC 1 cut(s) 1888
BseBI CCWGG 1 cut(s) 1881
BseDI CCNNGG 2 cut(s) 480, 930
BseGI GGATG 8 cut(s) 138, 220, 871, 1360, 1399, 1628, 1843, 2002
BseJI GATNNNNATC 1 cut(s) 1888
BseLI CCNNNNNNNGG 8 cut(s) 163, 578, 1046, 1319, 1439, 1711, 1760, 1970
BseMI GCAATG 2 cut(s) 231, 1307
BseMII CTCAG 1 cut(s) 792
BseNI ACTGG 3 cut(s) 793, 1326, 1466
BseRI GAGGAG 6 cut(s) 36, 83, 567, 1217, 1250, 1772
BseXI GCAGC 7 cut(s) 310, 456, 511, 523, 711, 1741, 1803
BsgI GTGCAG 1 cut(s) 1088
Bsh1236I CGCG 1 cut(s) 270
BshFI GGCC 3 cut(s) 929, 1169, 1879
BshTI ACCGGT 1 cut(s) 1531
BsiHKAI GWGCWC 3 cut(s) 28, 396, 800
BsiSI CCGG 5 cut(s) 480, 1166, 1391, 1433, 1532
BslFI GGGAC 6 cut(s) 293, 1086, 1388, 1485, 1626, 1688
BslI CCNNNNNNNGG 8 cut(s) 163, 578, 1046, 1319, 1439, 1711, 1760, 1970
BsmAI GTCTC 3 cut(s) 147, 342, 1199
BsmFI GGGAC 6 cut(s) 293, 1086, 1388, 1485, 1626, 1688
BsmI GAATGC 2 cut(s) 683, 1505
BsnI GGCC 3 cut(s) 929, 1169, 1879
Bso31I GGTCTC 2 cut(s) 147, 342
Bsp119I TTCGAA 2 cut(s) 1425, 1956
Bsp1286I GDGCHC 3 cut(s) 28, 396, 800
Bsp1407I TGTACA 1 cut(s) 1330
Bsp143I GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
Bsp1720I GCTNAGC 1 cut(s) 251
BspACI CCGC 3 cut(s) 1155, 1161, 1626
BspANI GGCC 3 cut(s) 929, 1169, 1879
BspCNI CTCAG 1 cut(s) 793
BspFNI CGCG 1 cut(s) 270
BspLI GGNNCC 3 cut(s) 1324, 1614, 1975
BspMI ACCTGC 2 cut(s) 207, 895
BspPI GGATC 3 cut(s) 1317, 1330, 1891
BspT104I TTCGAA 2 cut(s) 1425, 1956
BspTNI GGTCTC 2 cut(s) 147, 342
BsrDI GCAATG 2 cut(s) 231, 1307
BsrFI RCCGGY 2 cut(s) 1165, 1531
BsrGI TGTACA 1 cut(s) 1330
BsrI ACTGG 3 cut(s) 793, 1326, 1466
BssAI RCCGGY 2 cut(s) 1165, 1531
BssECI CCNNGG 2 cut(s) 480, 930
BssMI GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
BssSI CACGAG 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 930
Bst2BI CACGAG 1 cut(s) 132
Bst2UI CCWGG 1 cut(s) 1881
Bst4CI ACNGT 6 cut(s) 122, 266, 284, 351, 450, 586
Bst6I CTCTTC 2 cut(s) 693, 1227
BstAPI GCANNNNNTGC 1 cut(s) 233
BstAUI TGTACA 1 cut(s) 1330
BstBI TTCGAA 2 cut(s) 1425, 1956
BstC8I GCNNGC 2 cut(s) 808, 1821
BstDEI CTNAG 6 cut(s) 251, 341, 801, 1228, 1594, 2006
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 8 cut(s) 138, 220, 871, 1360, 1399, 1628, 1843, 2002
BstFNI CGCG 1 cut(s) 270
BstH2I RGCGCY 1 cut(s) 470
BstHHI GCGC 2 cut(s) 469, 499
BstKTI GATC 9 cut(s) 963, 1037, 1089, 1200, 1242, 1325, 1362, 1495, 1886
BstMAI GTCTC 3 cut(s) 147, 342, 1199
BstMBI GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
BstMWI GCNNNNNNNGC 1 cut(s) 233
BstNI CCWGG 1 cut(s) 1881
BstNSI RCATGY 3 cut(s) 873, 1556, 1838
BstSCI CCNGG 2 cut(s) 479, 1879
BstSFI CTRYAG 1 cut(s) 1314
BstUI CGCG 1 cut(s) 270
BstV1I GCAGC 7 cut(s) 310, 456, 511, 523, 711, 1741, 1803
BstV2I GAAGAC 2 cut(s) 451, 866
BstX2I RGATCY 2 cut(s) 1322, 1883
BstYI RGATCY 2 cut(s) 1322, 1883
BsuRI GGCC 3 cut(s) 929, 1169, 1879
BtsCI GGATG 8 cut(s) 138, 220, 871, 1360, 1399, 1628, 1843, 2002
BtsIMutI CAGTG 4 cut(s) 800, 1333, 1473, 1817
BveI ACCTGC 2 cut(s) 207, 895
Cac8I GCNNGC 2 cut(s) 808, 1821
CaiI CAGNNNCTG 2 cut(s) 566, 1816
CfoI GCGC 2 cut(s) 469, 499
Cfr10I RCCGGY 2 cut(s) 1165, 1531
Cfr13I GGNCC 3 cut(s) 1295, 1613, 1861
CseI GACGC 1 cut(s) 121
Csp6I GTAC 6 cut(s) 835, 989, 1268, 1283, 1331, 2003
CspAI ACCGGT 1 cut(s) 1531
CviAII CATG 7 cut(s) 295, 870, 1262, 1553, 1583, 1802, 1835
CviQI GTAC 6 cut(s) 835, 989, 1268, 1283, 1331, 2003
DdeI CTNAG 6 cut(s) 251, 341, 801, 1228, 1594, 2006
DpnI GATC 9 cut(s) 962, 1036, 1088, 1199, 1241, 1324, 1361, 1494, 1885
DpnII GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
Eam1104I CTCTTC 2 cut(s) 693, 1227
EarI CTCTTC 2 cut(s) 693, 1227
Ecl136II GAGCTC 1 cut(s) 394
Eco130I CCWWGG 1 cut(s) 930
Eco147I AGGCCT 1 cut(s) 929
Eco24I GRGCYC 1 cut(s) 396
Eco31I GGTCTC 2 cut(s) 147, 342
Eco47I GGWCC 3 cut(s) 1295, 1613, 1861
Eco47III AGCGCT 1 cut(s) 468
Eco53kI GAGCTC 1 cut(s) 394
Eco57I CTGAAG 2 cut(s) 528, 1638
EcoICRI GAGCTC 1 cut(s) 394
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoO109I RGGNCCY 2 cut(s) 1295, 1613
EcoRI GAATTC 2 cut(s) 1679, 1913
EcoRII CCWGG 1 cut(s) 1879
EcoT14I CCWWGG 1 cut(s) 930
EcoT22I ATGCAT 4 cut(s) 871, 1507, 1519, 1554
EcoT38I GRGCYC 1 cut(s) 396
ErhI CCWWGG 1 cut(s) 930
FaeI CATG 7 cut(s) 298, 873, 1265, 1556, 1586, 1805, 1838
FalI AAGNNNNNCTT 2 cut(s) 914, 946
FaqI GGGAC 6 cut(s) 293, 1086, 1388, 1485, 1626, 1688
FatI CATG 7 cut(s) 294, 869, 1261, 1552, 1582, 1801, 1834
FauI CCCGC 2 cut(s) 1168, 1619
FbaI TGATCA 1 cut(s) 1359
Fnu4HI GCNGC 7 cut(s) 324, 470, 500, 537, 725, 1730, 1817
FokI GGATG 8 cut(s) 125, 227, 878, 1367, 1406, 1635, 1830, 2009
FriOI GRGCYC 1 cut(s) 396
Fsp4HI GCNGC 7 cut(s) 324, 470, 500, 537, 725, 1730, 1817
FspBI CTAG 6 cut(s) 116, 246, 303, 578, 1635, 1865
GlaI GCGC 2 cut(s) 468, 498
GluI GCNGC 7 cut(s) 324, 470, 500, 537, 725, 1730, 1817
HaeII RGCGCY 1 cut(s) 470
HaeIII GGCC 3 cut(s) 929, 1169, 1879
HapII CCGG 5 cut(s) 480, 1166, 1391, 1433, 1532
HgaI GACGC 1 cut(s) 121
HhaI GCGC 2 cut(s) 469, 499
Hin1II CATG 7 cut(s) 298, 873, 1265, 1556, 1586, 1805, 1838
Hin6I GCGC 2 cut(s) 467, 497
HinP1I GCGC 2 cut(s) 467, 497
HindIII AAGCTT 3 cut(s) 365, 1302, 1574
HpaII CCGG 5 cut(s) 480, 1166, 1391, 1433, 1532
HphI GGTGA 6 cut(s) 782, 1029, 1096, 1207, 1454, 1954
Hpy166II GTNNAC 1 cut(s) 1331
Hpy188I TCNGA 8 cut(s) 9, 462, 547, 617, 802, 1381, 1714, 1888
Hpy8I GTNNAC 1 cut(s) 1331
Hpy99I CGWCG 1 cut(s) 115
HpyAV CCTTC 5 cut(s) 916, 968, 1180, 1613, 1904
HpyCH4III ACNGT 6 cut(s) 122, 266, 284, 351, 450, 586
HpyCH4IV ACGT 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 1 cut(s) 233
HpyF3I CTNAG 6 cut(s) 251, 341, 801, 1228, 1594, 2006
HpySE526I ACGT 1 cut(s) 384
Hsp92II CATG 7 cut(s) 298, 873, 1265, 1556, 1586, 1805, 1838
HspAI GCGC 2 cut(s) 467, 497
Ksp22I TGATCA 1 cut(s) 1359
Kzo9I GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
LmnI GCTCC 5 cut(s) 23, 166, 391, 568, 574
Lsp1109I GCAGC 7 cut(s) 310, 456, 511, 523, 711, 1741, 1803
LweI GCATC 7 cut(s) 548, 736, 856, 1204, 1492, 1526, 1613
MaeI CTAG 6 cut(s) 116, 246, 303, 578, 1635, 1865
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 4 cut(s) 944, 1589, 1763, 1942
MalI GATC 9 cut(s) 962, 1036, 1088, 1199, 1241, 1324, 1361, 1494, 1885
MboI GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
MboII GAAGA 8 cut(s) 456, 534, 710, 866, 1244, 1502, 1538, 1690
MflI RGATCY 2 cut(s) 1322, 1883
MhlI GDGCHC 3 cut(s) 28, 396, 800
MlyI GAGTC 4 cut(s) 13, 144, 719, 1370
MmeI TCCRAC 3 cut(s) 333, 432, 1027
Mph1103I ATGCAT 4 cut(s) 871, 1507, 1519, 1554
MroXI GAANNNNTTC 1 cut(s) 1893
MseI TTAA 6 cut(s) 98, 491, 785, 1128, 1407, 1830
MslI CAYNNNNRTG 1 cut(s) 1500
MspA1I CMGCKG 1 cut(s) 1319
MspI CCGG 5 cut(s) 480, 1166, 1391, 1433, 1532
MspR9I CCNGG 2 cut(s) 481, 1881
Mva1269I GAATGC 2 cut(s) 683, 1505
MvaI CCWGG 1 cut(s) 1881
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 1 cut(s) 233
NciI CCSGG 1 cut(s) 481
NdeII GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
NlaIII CATG 7 cut(s) 298, 873, 1265, 1556, 1586, 1805, 1838
NlaIV GGNNCC 3 cut(s) 1324, 1614, 1975
NmuCI GTSAC 2 cut(s) 1589, 1942
NsiI ATGCAT 4 cut(s) 871, 1507, 1519, 1554
NspI RCATGY 3 cut(s) 873, 1556, 1838
NspV TTCGAA 2 cut(s) 1425, 1956
PceI AGGCCT 1 cut(s) 929
PctI GAATGC 2 cut(s) 683, 1505
PdmI GAANNNNTTC 1 cut(s) 1893
PfeI GAWTC 8 cut(s) 107, 172, 648, 665, 1015, 1889, 1936, 1953
PflMI CCANNNNNTGG 2 cut(s) 163, 1970
PinAI ACCGGT 1 cut(s) 1531
PkrI GCNGC 7 cut(s) 325, 471, 501, 538, 726, 1731, 1818
PleI GAGTC 4 cut(s) 12, 143, 718, 1370
PpsI GAGTC 4 cut(s) 12, 143, 718, 1370
PpuMI RGGWCCY 2 cut(s) 1295, 1613
PshBI ATTAAT 1 cut(s) 1128
PsiI TTATAA 1 cut(s) 941
Psp124BI GAGCTC 1 cut(s) 396
Psp5II RGGWCCY 2 cut(s) 1295, 1613
Psp6I CCWGG 1 cut(s) 1879
PspGI CCWGG 1 cut(s) 1879
PspN4I GGNNCC 3 cut(s) 1324, 1614, 1975
PspPI GGNCC 3 cut(s) 1295, 1613, 1861
PspPPI RGGWCCY 2 cut(s) 1295, 1613
PstNI CAGNNNCTG 2 cut(s) 566, 1816
PsuI RGATCY 2 cut(s) 1322, 1883
PvuII CAGCTG 1 cut(s) 1319
RsaI GTAC 6 cut(s) 836, 990, 1269, 1284, 1332, 2004
RsaNI GTAC 6 cut(s) 835, 989, 1268, 1283, 1331, 2003
RseI CAYNNNNRTG 1 cut(s) 1500
SacI GAGCTC 1 cut(s) 396
SaqAI TTAA 6 cut(s) 98, 491, 785, 1128, 1407, 1830
SatI GCNGC 7 cut(s) 324, 470, 500, 537, 725, 1730, 1817
Sau3AI GATC 9 cut(s) 960, 1034, 1086, 1197, 1239, 1322, 1359, 1492, 1883
Sau96I GGNCC 3 cut(s) 1295, 1613, 1861
SchI GAGTC 4 cut(s) 13, 144, 719, 1370
ScrFI CCNGG 2 cut(s) 481, 1881
SduI GDGCHC 3 cut(s) 28, 396, 800
SfaNI GCATC 7 cut(s) 548, 736, 856, 1204, 1492, 1526, 1613
SfcI CTRYAG 1 cut(s) 1314
SfuI TTCGAA 2 cut(s) 1425, 1956
SinI GGWCC 3 cut(s) 1295, 1613, 1861
SmiMI CAYNNNNRTG 1 cut(s) 1500
SmlI CTYRAG 3 cut(s) 368, 1138, 1299
SmoI CTYRAG 3 cut(s) 368, 1138, 1299
SseBI AGGCCT 1 cut(s) 929
SsiI CCGC 3 cut(s) 1155, 1161, 1626
SspI AATATT 2 cut(s) 752, 1693
SspMI CTAG 6 cut(s) 116, 246, 303, 578, 1635, 1865
SstI GAGCTC 1 cut(s) 396
StuI AGGCCT 1 cut(s) 929
StyD4I CCNGG 2 cut(s) 479, 1879
StyI CCWWGG 1 cut(s) 930
TaaI ACNGT 6 cut(s) 122, 266, 284, 351, 450, 586
TaiI ACGT 1 cut(s) 387
TaqI TCGA 8 cut(s) 105, 110, 1013, 1089, 1200, 1212, 1425, 1956
TaqII GACCGA 1 cut(s) 438
TatI WGTACW 3 cut(s) 1282, 1330, 2002
TfiI GAWTC 8 cut(s) 107, 172, 648, 665, 1015, 1889, 1936, 1953
Tru1I TTAA 6 cut(s) 98, 491, 785, 1128, 1407, 1830
Tru9I TTAA 6 cut(s) 98, 491, 785, 1128, 1407, 1830
TscAI CASTG 4 cut(s) 800, 1333, 1473, 1817
TseFI GTSAC 2 cut(s) 1589, 1942
TseI GCWGC 7 cut(s) 323, 469, 499, 536, 724, 1729, 1816
Tsp45I GTSAC 2 cut(s) 1589, 1942
TspGWI ACGGA 2 cut(s) 1585, 2009
TspRI CASTG 4 cut(s) 800, 1333, 1473, 1817
Van91I CCANNNNNTGG 2 cut(s) 163, 1970
VpaK11BI GGWCC 3 cut(s) 1295, 1613, 1861
VspI ATTAAT 1 cut(s) 1128
XagI CCTNNNNNAGG 1 cut(s) 576
XapI RAATTY 6 cut(s) 456, 1648, 1679, 1913, 1927, 1958
XceI RCATGY 3 cut(s) 873, 1556, 1838
XcmI CCANNNNNNNNNTGG 1 cut(s) 853
XmnI GAANNNNTTC 1 cut(s) 1893
XspI CTAG 6 cut(s) 116, 246, 303, 578, 1635, 1865
Zsp2I ATGCAT 4 cut(s) 871, 1507, 1519, 1554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.