FvH4_5g11230
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
6371312 .. 6372274
963 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11230.t1

Sequence Viewer

Length: 963 bp
ATGGCGGACAAACTAATCGGGAAACATCTGTACAAGCAGCTCCTTGATGGTGTTAAGGAAGCATTAGGCAGCAGTACAAAGTTTACGTCGCTCCTTGAAGATCTCAGACTGACGCTGGTCTCTCTACAACCACGAATCGCTCAACATGATCCGGAAATGTATCTCCTGCCAAATGAGGAGACCCGAAATCTCGAGCGGCAAATGGAGGAGGGAGTGAAGCTAGTTGGCCAGCTATCGAGTCTTGGCATGTGGAACTATCACTGCATGAAGCGAAGCTACTCCGACCAACTTGCCGAATTGTTCAGGTCTCTTAGAAGAGTCTTGTACATTCTAAAGCTGCAGGAAGAGAGACATACGAGTGAGCTCTTGCTTGTTGCAAGGAACATTCGCGACAGACAAAATGACCTGGAAAGAAGGTTATGTGGTTTACTAAAAATGAAGCTGGAGGAGCAGAACGAAGGCAATGGTCAGGTGAAAAATGGAGGAGGAGGAGGGGCTGGTCAGGATCTGGAGCAAGTGTTTTGCCGTTTGCTTGAACTCTTGGTTTTGGAAGTTGATGTAGAATTGAATGGCAAAAGGAGCTTCAAACCGGTCTTGGTTGATCTCAAATCCACGGCTAGTTCCTTCCAACCACTCATACAAGAGATATCACAGTTTAACAACATACTGCATCTATCAAAGGAGGAACTGGAAAATCTGAGGGAACAATTGCAGCAAGGTATCGAGATTGTTGACAAGTGCTCGAAGGTACCTCGAGGGGAGAGCTACAAAAGGTATGAATACTTCGAAAGACTTCTGGAGTTGGATGAATATCTTCGAGGATTGTTATGTATGATGAGGGAGCAGGTAGCCAAGGATATGAAGGAGACTTTGCTTTCTGTATGCAACTTGGAAATGATGCTCACTCGAATTGAAGAGCTACATCTGGCACAAAATCAAATTGATCAACACCCTGCTTTGTGA

Protein Analysis

321

Amino Acids

37.1

Weight (kDa)

5.67

Isoelectric Point (pI)

50.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 12 - 125 3.8e-10 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 189 - 300 2e-16 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 753
Acc36I ACCTGC 1 cut(s) 835
Acc65I GGTACC 1 cut(s) 748
AccB1I GGYRCC 1 cut(s) 748
AccBSI CCGCTC 1 cut(s) 196
AccII CGCG 1 cut(s) 390
AccIII TCCGGA 1 cut(s) 151
AciI CCGC 2 cut(s) 5, 196
AclWI GGATC 2 cut(s) 143, 513
AcoI YGGCCR 1 cut(s) 226
AfaI GTAC 4 cut(s) 32, 76, 326, 750
AgeI ACCGGT 1 cut(s) 589
AgsI TTSAA 5 cut(s) 98, 536, 568, 586, 914
AjnI CCWGG 1 cut(s) 405
Alw21I GWGCWC 2 cut(s) 366, 743
Alw26I GTCTC 5 cut(s) 124, 173, 312, 343, 860
AlwI GGATC 2 cut(s) 143, 513
AlwNI CAGNNNCTG 1 cut(s) 508
Ama87I CYCGRG 2 cut(s) 191, 753
Aor13HI TCCGGA 1 cut(s) 151
AoxI GGCC 1 cut(s) 226
ApeKI GCWGC 4 cut(s) 37, 69, 337, 712
ArsI GACNNNNNNTTYG 2 cut(s) 71, 103
AsiGI ACCGGT 1 cut(s) 589
Asp700I GAANNNNTTC 2 cut(s) 792, 813
Asp718I GGTACC 1 cut(s) 748
AsuHPI GGTGA 1 cut(s) 484
AsuII TTCGAA 1 cut(s) 786
AvaI CYCGRG 2 cut(s) 191, 753
BalI TGGCCA 1 cut(s) 228
BanI GGYRCC 1 cut(s) 748
BanII GRGCYC 1 cut(s) 366
BarI GAAGNNNNNNTAC 4 cut(s) 260, 292, 767, 799
Bbv12I GWGCWC 2 cut(s) 366, 743
BbvI GCAGC 4 cut(s) 49, 81, 324, 724
BccI CCATC 1 cut(s) 41
BceAI ACGGC 2 cut(s) 510, 630
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BciT130I CCWGG 1 cut(s) 407
BclI TGATCA 1 cut(s) 943
BcoDI GTCTC 5 cut(s) 124, 173, 312, 343, 860
BfaI CTAG 2 cut(s) 221, 618
BfmI CTRYAG 1 cut(s) 338
BfuAI ACCTGC 1 cut(s) 835
BglII AGATCT 1 cut(s) 100
BisI GCNGC 5 cut(s) 38, 70, 197, 338, 713
BlsI GCNGC 5 cut(s) 39, 71, 198, 339, 714
Bme1390I CCNGG 1 cut(s) 407
BmeT110I CYCGRG 2 cut(s) 191, 753
BmiI GGNNCC 1 cut(s) 750
BmrFI CCNGG 1 cut(s) 407
BmsI GCATC 2 cut(s) 679, 888
BoxI GACNNNNGTC 1 cut(s) 116
BpmI CTGGAG 3 cut(s) 464, 530, 818
Bpu14I TTCGAA 1 cut(s) 786
BsaBI GATNNNNATC 1 cut(s) 810
BsaI GGTCTC 3 cut(s) 124, 173, 312
BsaJI CCNNGG 2 cut(s) 612, 852
BsaWI WCCGGW 2 cut(s) 151, 589
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bse118I RCCGGY 1 cut(s) 589
Bse1I ACTGG 1 cut(s) 693
Bse3DI GCAATG 1 cut(s) 469
Bse8I GATNNNNATC 1 cut(s) 810
BseAI TCCGGA 1 cut(s) 151
BseBI CCWGG 1 cut(s) 407
BseDI CCNNGG 2 cut(s) 612, 852
BseGI GGATG 1 cut(s) 811
BseJI GATNNNNATC 1 cut(s) 810
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 2 cut(s) 118, 689
BseNI ACTGG 1 cut(s) 693
BseRI GAGGAG 6 cut(s) 191, 221, 461, 498, 501, 504
BseXI GCAGC 4 cut(s) 49, 81, 324, 724
Bsh1236I CGCG 1 cut(s) 390
BshFI GGCC 1 cut(s) 228
BshNI GGYRCC 1 cut(s) 748
BshTI ACCGGT 1 cut(s) 589
BsiHKAI GWGCWC 2 cut(s) 366, 743
BsiHKCI CYCGRG 2 cut(s) 191, 753
BsiSI CCGG 2 cut(s) 152, 590
BsmAI GTCTC 5 cut(s) 124, 173, 312, 343, 860
BsnI GGCC 1 cut(s) 228
Bso31I GGTCTC 3 cut(s) 124, 173, 312
BsoBI CYCGRG 2 cut(s) 191, 753
Bsp119I TTCGAA 1 cut(s) 786
Bsp1286I GDGCHC 2 cut(s) 366, 743
Bsp13I TCCGGA 1 cut(s) 151
Bsp1407I TGTACA 2 cut(s) 30, 324
Bsp143I GATC 5 cut(s) 100, 148, 505, 601, 943
Bsp68I TCGCGA 1 cut(s) 390
BspACI CCGC 2 cut(s) 5, 196
BspANI GGCC 1 cut(s) 228
BspCNI CTCAG 2 cut(s) 117, 690
BspEI TCCGGA 1 cut(s) 151
BspFNI CGCG 1 cut(s) 390
BspLI GGNNCC 1 cut(s) 750
BspMAI CTGCAG 1 cut(s) 342
BspMI ACCTGC 1 cut(s) 835
BspPI GGATC 2 cut(s) 143, 513
BspQI GCTCTTC 1 cut(s) 909
BspT104I TTCGAA 1 cut(s) 786
BspT107I GGYRCC 1 cut(s) 748
BspTNI GGTCTC 3 cut(s) 124, 173, 312
BsrBI CCGCTC 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 469
BsrFI RCCGGY 1 cut(s) 589
BsrGI TGTACA 2 cut(s) 30, 324
BsrI ACTGG 1 cut(s) 693
BssAI RCCGGY 1 cut(s) 589
BssECI CCNNGG 2 cut(s) 612, 852
BssMI GATC 5 cut(s) 100, 148, 505, 601, 943
BssT1I CCWWGG 1 cut(s) 852
Bst2UI CCWGG 1 cut(s) 407
Bst4CI ACNGT 1 cut(s) 654
Bst6I CTCTTC 3 cut(s) 310, 339, 909
BstAUI TGTACA 2 cut(s) 30, 324
BstBI TTCGAA 1 cut(s) 786
BstC8I GCNNGC 1 cut(s) 230
BstDEI CTNAG 3 cut(s) 104, 311, 698
BstDSI CCRYGG 1 cut(s) 612
BstF5I GGATG 1 cut(s) 811
BstFNI CGCG 1 cut(s) 390
BstKTI GATC 5 cut(s) 103, 151, 508, 604, 946
BstMAI GTCTC 5 cut(s) 124, 173, 312, 343, 860
BstMBI GATC 5 cut(s) 100, 148, 505, 601, 943
BstMWI GCNNNNNNNGC 2 cut(s) 448, 579
BstNI CCWGG 1 cut(s) 407
BstNSI RCATGY 1 cut(s) 250
BstPAI GACNNNNGTC 1 cut(s) 116
BstSCI CCNGG 1 cut(s) 405
BstSFI CTRYAG 1 cut(s) 338
BstUI CGCG 1 cut(s) 390
BstV1I GCAGC 4 cut(s) 49, 81, 324, 724
BstX2I RGATCY 2 cut(s) 100, 505
BstYI RGATCY 2 cut(s) 100, 505
BsuRI GGCC 1 cut(s) 228
BtgI CCRYGG 1 cut(s) 612
BtsCI GGATG 1 cut(s) 811
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 1 cut(s) 259
BtuMI TCGCGA 1 cut(s) 390
BveI ACCTGC 1 cut(s) 835
Cac8I GCNNGC 1 cut(s) 230
CaiI CAGNNNCTG 1 cut(s) 508
Cfr10I RCCGGY 1 cut(s) 589
CseI GACGC 1 cut(s) 121
Csp6I GTAC 4 cut(s) 31, 75, 325, 749
CspAI ACCGGT 1 cut(s) 589
CviAII CATG 3 cut(s) 146, 247, 265
CviQI GTAC 4 cut(s) 31, 75, 325, 749
DdeI CTNAG 3 cut(s) 104, 311, 698
DpnI GATC 5 cut(s) 102, 150, 507, 603, 945
DpnII GATC 5 cut(s) 100, 148, 505, 601, 943
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 3 cut(s) 310, 339, 909
EarI CTCTTC 3 cut(s) 310, 339, 909
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 1 cut(s) 852
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 3 cut(s) 124, 173, 312
Eco32I GATATC 1 cut(s) 648
Eco53kI GAGCTC 1 cut(s) 364
Eco88I CYCGRG 2 cut(s) 191, 753
EcoICRI GAGCTC 1 cut(s) 364
EcoRII CCWGG 1 cut(s) 405
EcoRV GATATC 1 cut(s) 648
EcoT14I CCWWGG 1 cut(s) 852
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 1 cut(s) 852
FaeI CATG 3 cut(s) 149, 250, 268
FatI CATG 3 cut(s) 145, 246, 264
FbaI TGATCA 1 cut(s) 943
Fnu4HI GCNGC 5 cut(s) 38, 70, 197, 338, 713
FokI GGATG 1 cut(s) 818
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 5 cut(s) 38, 70, 197, 338, 713
FspBI CTAG 2 cut(s) 221, 618
GluI GCNGC 5 cut(s) 38, 70, 197, 338, 713
GsuI CTGGAG 3 cut(s) 464, 530, 818
HaeIII GGCC 1 cut(s) 228
HapII CCGG 2 cut(s) 152, 590
HgaI GACGC 1 cut(s) 121
Hin1II CATG 3 cut(s) 149, 250, 268
HincII GTYRAC 1 cut(s) 733
HindII GTYRAC 1 cut(s) 733
HinfI GANTC 3 cut(s) 135, 238, 318
HpaII CCGG 2 cut(s) 152, 590
HphI GGTGA 1 cut(s) 484
Hpy166II GTNNAC 3 cut(s) 84, 428, 733
Hpy188I TCNGA 3 cut(s) 107, 283, 699
Hpy188III TCNNGA 8 cut(s) 19, 152, 191, 389, 503, 509, 724, 797
Hpy8I GTNNAC 3 cut(s) 84, 428, 733
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 5 cut(s) 408, 452, 634, 739, 856
HpyCH4III ACNGT 1 cut(s) 654
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 6 cut(s) 264, 340, 377, 670, 712, 885
HpyF10VI GCNNNNNNNGC 2 cut(s) 448, 579
HpyF3I CTNAG 3 cut(s) 104, 311, 698
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 3 cut(s) 149, 250, 268
Kpn2I TCCGGA 1 cut(s) 151
KpnI GGTACC 1 cut(s) 752
Ksp22I TGATCA 1 cut(s) 943
Kzo9I GATC 5 cut(s) 100, 148, 505, 601, 943
LguI GCTCTTC 1 cut(s) 909
LmnI GCTCC 6 cut(s) 45, 96, 448, 511, 579, 841
Lsp1109I GCAGC 4 cut(s) 49, 81, 324, 724
LweI GCATC 2 cut(s) 679, 888
MaeI CTAG 2 cut(s) 221, 618
MaeII ACGT 1 cut(s) 86
MalI GATC 5 cut(s) 102, 150, 507, 603, 945
MbiI CCGCTC 1 cut(s) 196
MboI GATC 5 cut(s) 100, 148, 505, 601, 943
MboII GAAGA 5 cut(s) 110, 327, 356, 806, 926
MfeI CAATTG 1 cut(s) 707
MflI RGATCY 2 cut(s) 100, 505
MhlI GDGCHC 2 cut(s) 366, 743
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 5 cut(s) 296, 563, 707, 909, 939
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 2 cut(s) 247, 327
MmeI TCCRAC 3 cut(s) 306, 652, 783
Mox20I TGGCCA 1 cut(s) 228
MroI TCCGGA 1 cut(s) 151
MroXI GAANNNNTTC 2 cut(s) 792, 813
MscI TGGCCA 1 cut(s) 228
MseI TTAA 2 cut(s) 54, 657
MslI CAYNNNNRTG 1 cut(s) 357
Msp20I TGGCCA 1 cut(s) 228
MspI CCGG 2 cut(s) 152, 590
MspR9I CCNGG 1 cut(s) 407
MunI CAATTG 1 cut(s) 707
MvaI CCWGG 1 cut(s) 407
MvnI CGCG 1 cut(s) 390
MwoI GCNNNNNNNGC 2 cut(s) 448, 579
NdeII GATC 5 cut(s) 100, 148, 505, 601, 943
NlaIII CATG 3 cut(s) 149, 250, 268
NlaIV GGNNCC 1 cut(s) 750
NruI TCGCGA 1 cut(s) 390
NspI RCATGY 1 cut(s) 250
NspV TTCGAA 1 cut(s) 786
PaeR7I CTCGAG 2 cut(s) 191, 753
PciSI GCTCTTC 1 cut(s) 909
PdmI GAANNNNTTC 2 cut(s) 792, 813
PfeI GAWTC 1 cut(s) 135
PinAI ACCGGT 1 cut(s) 589
PkrI GCNGC 5 cut(s) 39, 71, 198, 339, 714
PleI GAGTC 2 cut(s) 246, 326
PpsI GAGTC 2 cut(s) 246, 326
PshAI GACNNNNGTC 1 cut(s) 116
Psp124BI GAGCTC 1 cut(s) 366
Psp6I CCWGG 1 cut(s) 405
PspGI CCWGG 1 cut(s) 405
PspN4I GGNNCC 1 cut(s) 750
PspXI VCTCGAGB 1 cut(s) 753
PstI CTGCAG 1 cut(s) 342
PstNI CAGNNNCTG 1 cut(s) 508
PsuI RGATCY 2 cut(s) 100, 505
RruI TCGCGA 1 cut(s) 390
RsaI GTAC 4 cut(s) 32, 76, 326, 750
RsaNI GTAC 4 cut(s) 31, 75, 325, 749
RseI CAYNNNNRTG 1 cut(s) 357
SacI GAGCTC 1 cut(s) 366
SapI GCTCTTC 1 cut(s) 909
SaqAI TTAA 2 cut(s) 54, 657
SatI GCNGC 5 cut(s) 38, 70, 197, 338, 713
Sau3AI GATC 5 cut(s) 100, 148, 505, 601, 943
SchI GAGTC 2 cut(s) 247, 327
ScrFI CCNGG 1 cut(s) 407
SduI GDGCHC 2 cut(s) 366, 743
SfaNI GCATC 2 cut(s) 679, 888
SfcI CTRYAG 1 cut(s) 338
Sfr274I CTCGAG 2 cut(s) 191, 753
SfuI TTCGAA 1 cut(s) 786
SlaI CTCGAG 2 cut(s) 191, 753
SmiMI CAYNNNNRTG 1 cut(s) 357
SmlI CTYRAG 2 cut(s) 191, 753
SmoI CTYRAG 2 cut(s) 191, 753
Sse9I AATT 5 cut(s) 296, 563, 707, 909, 939
SsiI CCGC 2 cut(s) 5, 196
SspMI CTAG 2 cut(s) 221, 618
SstI GAGCTC 1 cut(s) 366
StyD4I CCNGG 1 cut(s) 405
StyI CCWWGG 1 cut(s) 852
TaaI ACNGT 1 cut(s) 654
TaiI ACGT 1 cut(s) 89
TaqI TCGA 8 cut(s) 192, 236, 723, 743, 754, 786, 817, 907
TasI AATT 5 cut(s) 296, 563, 707, 909, 939
TatI WGTACW 3 cut(s) 30, 74, 324
TauI GCSGC 1 cut(s) 199
TfiI GAWTC 1 cut(s) 135
Tru1I TTAA 2 cut(s) 54, 657
Tru9I TTAA 2 cut(s) 54, 657
TscAI CASTG 1 cut(s) 266
TseI GCWGC 4 cut(s) 37, 69, 337, 712
TspDTI ATGAA 5 cut(s) 281, 452, 792, 822, 875
TspRI CASTG 1 cut(s) 266
XceI RCATGY 1 cut(s) 250
XhoI CTCGAG 2 cut(s) 191, 753
XmnI GAANNNNTTC 2 cut(s) 792, 813
XspI CTAG 2 cut(s) 221, 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.