Rw0G013250
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00594
Physical Location & Seq
Reverse (-)
43999 .. 44958
960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013250.1

Sequence Viewer

Length: 930 bp
ATGCCGGACAAGCTAATCGGGAAACATCTGTATAAGCTGCTCCTTGATGGTGTTAAGGAAGCAGGCAGCAGTAGAAAGTTTACATCCCTCCTTGAAGATCTCAGACTCACGCTGGTCTCTCTACAACCACGAATCGCCCAGCATGATCCGGAAATGTATCTCCTGCCAAATGAGGAAATACAAAATCTTGACCGACAGATGCAGGAGGGCGTGAAGCTCGTTAGCCAGCTATCGAGTCTTGGCATGTGGAACTACCACTGCATGAAGCGAAGCTACTCCGACCAACTTGCTGAGTTGTACAGGTCTCTTAGAAGAGTGTTATACATACTCAACCTGCAGGAAGAGAGAGATACGAATGAGCTCTTGCTTGTCGCAAGGAATATACGCGACAGACAAAATGATTTAGAAACAAGATTATGTGGTTTACTAAAAGTGCAGCCGGAGCAAAACGAAGGCAATGGGGCTGGTCAGGATCTGGAGCAAGTGTTTTGTCGTCTGCTTGAACTCTTGGTTTTGGAAGTTGATGTACAATGGAATGGCAAAAGGAGCTTCAAACCAGTCTTGGTTGATCTCAAATCCACGGTTAGGTCCTTCCAACCACTCATAGAAGAGATATCACAGTATAACAACATATTGCATCTACCAAAGGAGGAACTTGAAAATCTGAGGAAACAATTGGAGAAAGGTATTGACCTCGTTCACAAGTGCTCCAAGATTCCTCAATGTGTGAGCTACAATAAGTATGAATACTTCGACCAACTTCTCGAGTTGGATGAATATCTTCGAAGATTGTTATGTATGATGAGGGAGCAGGTAGCGAAGAATATGAAGGAGACTTTGGTTTCTGTATGCAACTTGGAGATGATGCTCACGCGAATTGAAGAGCTACGTCTGGCACAAAATCAAATTGATCAACCTCCTGCTTTATGA

Protein Analysis

309

Amino Acids

36.26

Weight (kDa)

5.73

Isoelectric Point (pI)

53.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 18 - 125 1.2e-10 Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8 PF05659 179 - 290 5.6e-18 Arabidopsis broad-spectrum mildew resistance protein RPW8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 342, 802
AccII CGCG 2 cut(s) 387, 874
AccIII TCCGGA 1 cut(s) 148
AclWI GGATC 2 cut(s) 140, 480
AfaI GTAC 2 cut(s) 299, 528
AfiI CCNNNNNNNGG 1 cut(s) 585
AgsI TTSAA 5 cut(s) 95, 503, 553, 659, 881
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AluBI AGCT 9 cut(s) 13, 37, 217, 229, 273, 361, 549, 732, 886
AluI AGCT 9 cut(s) 13, 37, 217, 229, 273, 361, 549, 732, 886
Alw21I GWGCWC 2 cut(s) 363, 710
Alw26I GTCTC 3 cut(s) 121, 309, 827
AlwI GGATC 2 cut(s) 140, 480
AlwNI CAGNNNCTG 1 cut(s) 475
Ama87I CYCGRG 1 cut(s) 764
Aor13HI TCCGGA 1 cut(s) 148
ApeKI GCWGC 3 cut(s) 37, 66, 436
Asp700I GAANNNNTTC 1 cut(s) 780
AspS9I GGNCC 1 cut(s) 588
AsuII TTCGAA 1 cut(s) 784
AvaI CYCGRG 1 cut(s) 764
AvaII GGWCC 1 cut(s) 588
BanII GRGCYC 1 cut(s) 363
BarI GAAGNNNNNNTAC 6 cut(s) 257, 289, 510, 542, 734, 766
Bbv12I GWGCWC 2 cut(s) 363, 710
BbvI GCAGC 3 cut(s) 24, 78, 448
BccI CCATC 1 cut(s) 41
BcgI CGANNNNNNTGC 2 cut(s) 269, 303
BclI TGATCA 1 cut(s) 910
BcoDI GTCTC 3 cut(s) 121, 309, 827
BfmI CTRYAG 1 cut(s) 335
BfuAI ACCTGC 2 cut(s) 342, 802
BglII AGATCT 1 cut(s) 97
BisI GCNGC 3 cut(s) 38, 67, 437
BlsI GCNGC 3 cut(s) 39, 68, 438
Bme18I GGWCC 1 cut(s) 588
BmeT110I CYCGRG 1 cut(s) 764
BmgT120I GGNCC 1 cut(s) 588
BmsI GCATC 3 cut(s) 189, 646, 855
BpmI CTGGAG 1 cut(s) 497
Bpu14I TTCGAA 1 cut(s) 784
BsaBI GATNNNNATC 1 cut(s) 777
BsaI GGTCTC 2 cut(s) 121, 309
BsaJI CCNNGG 1 cut(s) 579
BsaWI WCCGGW 1 cut(s) 148
BsaXI ACNNNNNCTCC 4 cut(s) 470, 500, 692, 722
Bsc4I CCNNNNNNNGG 1 cut(s) 585
Bse1I ACTGG 1 cut(s) 557
Bse3DI GCAATG 1 cut(s) 463
Bse8I GATNNNNATC 1 cut(s) 777
BseAI TCCGGA 1 cut(s) 148
BseDI CCNNGG 1 cut(s) 579
BseGI GGATG 2 cut(s) 83, 778
BseJI GATNNNNATC 1 cut(s) 777
BseLI CCNNNNNNNGG 1 cut(s) 585
BseMI GCAATG 1 cut(s) 463
BseMII CTCAG 3 cut(s) 115, 282, 656
BseNI ACTGG 1 cut(s) 557
BseXI GCAGC 3 cut(s) 24, 78, 448
BseYI CCCAGC 1 cut(s) 138
BsgI GTGCAG 1 cut(s) 455
Bsh1236I CGCG 2 cut(s) 387, 874
BsiHKAI GWGCWC 2 cut(s) 363, 710
BsiHKCI CYCGRG 1 cut(s) 764
BsiSI CCGG 3 cut(s) 5, 149, 440
BslI CCNNNNNNNGG 1 cut(s) 585
BsmAI GTCTC 3 cut(s) 121, 309, 827
Bso31I GGTCTC 2 cut(s) 121, 309
BsoBI CYCGRG 1 cut(s) 764
Bsp119I TTCGAA 1 cut(s) 784
Bsp1286I GDGCHC 2 cut(s) 363, 710
Bsp13I TCCGGA 1 cut(s) 148
Bsp1407I TGTACA 2 cut(s) 297, 526
Bsp143I GATC 5 cut(s) 97, 145, 472, 568, 910
BspCNI CTCAG 3 cut(s) 114, 283, 657
BspEI TCCGGA 1 cut(s) 148
BspFNI CGCG 2 cut(s) 387, 874
BspMAI CTGCAG 1 cut(s) 339
BspMI ACCTGC 2 cut(s) 342, 802
BspPI GGATC 2 cut(s) 140, 480
BspQI GCTCTTC 1 cut(s) 876
BspT104I TTCGAA 1 cut(s) 784
BspTNI GGTCTC 2 cut(s) 121, 309
BsrDI GCAATG 1 cut(s) 463
BsrGI TGTACA 2 cut(s) 297, 526
BsrI ACTGG 1 cut(s) 557
BssECI CCNNGG 1 cut(s) 579
BssMI GATC 5 cut(s) 97, 145, 472, 568, 910
Bst4CI ACNGT 2 cut(s) 583, 621
Bst6I CTCTTC 4 cut(s) 307, 336, 603, 876
BstAUI TGTACA 2 cut(s) 297, 526
BstBI TTCGAA 1 cut(s) 784
BstC8I GCNNGC 2 cut(s) 64, 227
BstDEI CTNAG 4 cut(s) 101, 291, 308, 665
BstDSI CCRYGG 1 cut(s) 579
BstF5I GGATG 2 cut(s) 83, 778
BstFNI CGCG 2 cut(s) 387, 874
BstKTI GATC 5 cut(s) 100, 148, 475, 571, 913
BstMAI GTCTC 3 cut(s) 121, 309, 827
BstMBI GATC 5 cut(s) 97, 145, 472, 568, 910
BstMWI GCNNNNNNNGC 3 cut(s) 10, 442, 546
BstNSI RCATGY 1 cut(s) 247
BstSFI CTRYAG 1 cut(s) 335
BstUI CGCG 2 cut(s) 387, 874
BstV1I GCAGC 3 cut(s) 24, 78, 448
BstX2I RGATCY 2 cut(s) 97, 472
BstYI RGATCY 2 cut(s) 97, 472
BtgI CCRYGG 1 cut(s) 579
BtsCI GGATG 2 cut(s) 83, 778
BtsI GCAGTG 1 cut(s) 256
BtsIMutI CAGTG 1 cut(s) 256
BveI ACCTGC 2 cut(s) 342, 802
Cac8I GCNNGC 2 cut(s) 64, 227
CaiI CAGNNNCTG 1 cut(s) 475
Cfr13I GGNCC 1 cut(s) 588
Csp6I GTAC 2 cut(s) 298, 527
CviAII CATG 3 cut(s) 143, 244, 262
CviQI GTAC 2 cut(s) 298, 527
DdeI CTNAG 4 cut(s) 101, 291, 308, 665
DpnI GATC 5 cut(s) 99, 147, 474, 570, 912
DpnII GATC 5 cut(s) 97, 145, 472, 568, 910
Eam1104I CTCTTC 4 cut(s) 307, 336, 603, 876
EarI CTCTTC 4 cut(s) 307, 336, 603, 876
Ecl136II GAGCTC 1 cut(s) 361
Eco24I GRGCYC 1 cut(s) 363
Eco31I GGTCTC 2 cut(s) 121, 309
Eco32I GATATC 1 cut(s) 615
Eco47I GGWCC 1 cut(s) 588
Eco53kI GAGCTC 1 cut(s) 361
Eco88I CYCGRG 1 cut(s) 764
EcoICRI GAGCTC 1 cut(s) 361
EcoO109I RGGNCCY 1 cut(s) 588
EcoRV GATATC 1 cut(s) 615
EcoT38I GRGCYC 1 cut(s) 363
FaeI CATG 3 cut(s) 146, 247, 265
FatI CATG 3 cut(s) 142, 243, 261
FbaI TGATCA 1 cut(s) 910
Fnu4HI GCNGC 3 cut(s) 38, 67, 437
FokI GGATG 2 cut(s) 70, 785
FriOI GRGCYC 1 cut(s) 363
Fsp4HI GCNGC 3 cut(s) 38, 67, 437
GluI GCNGC 3 cut(s) 38, 67, 437
GsaI CCCAGC 1 cut(s) 142
GsuI CTGGAG 1 cut(s) 497
HapII CCGG 3 cut(s) 5, 149, 440
Hin1II CATG 3 cut(s) 146, 247, 265
HinfI GANTC 4 cut(s) 105, 132, 235, 715
HpaII CCGG 3 cut(s) 5, 149, 440
Hpy166II GTNNAC 3 cut(s) 81, 425, 700
Hpy188I TCNGA 3 cut(s) 104, 280, 666
Hpy188III TCNNGA 6 cut(s) 19, 149, 188, 470, 476, 764
Hpy8I GTNNAC 3 cut(s) 81, 425, 700
HpyAV CCTTC 3 cut(s) 446, 601, 823
HpyCH4III ACNGT 2 cut(s) 583, 621
HpyCH4IV ACGT 1 cut(s) 889
HpyCH4V TGCA 6 cut(s) 202, 261, 337, 436, 637, 852
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 442, 546
HpyF3I CTNAG 4 cut(s) 101, 291, 308, 665
HpySE526I ACGT 1 cut(s) 889
Hsp92II CATG 3 cut(s) 146, 247, 265
Kpn2I TCCGGA 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 910
Kzo9I GATC 5 cut(s) 97, 145, 472, 568, 910
LguI GCTCTTC 1 cut(s) 876
LmnI GCTCC 6 cut(s) 45, 442, 478, 546, 713, 808
Lsp1109I GCAGC 3 cut(s) 24, 78, 448
LweI GCATC 3 cut(s) 189, 646, 855
MaeII ACGT 1 cut(s) 889
MalI GATC 5 cut(s) 99, 147, 474, 570, 912
MboI GATC 5 cut(s) 97, 145, 472, 568, 910
MboII GAAGA 8 cut(s) 107, 324, 353, 620, 773, 798, 832, 893
MfeI CAATTG 1 cut(s) 674
MflI RGATCY 2 cut(s) 97, 472
MhlI GDGCHC 2 cut(s) 363, 710
MluCI AATT 3 cut(s) 674, 876, 906
MlyI GAGTC 2 cut(s) 99, 244
MmeI TCCRAC 3 cut(s) 303, 619, 750
MnlI CCTC 9 cut(s) 98, 166, 199, 643, 660, 704, 729, 798, 927
MroI TCCGGA 1 cut(s) 148
MroXI GAANNNNTTC 1 cut(s) 780
MseI TTAA 1 cut(s) 54
MspI CCGG 3 cut(s) 5, 149, 440
MunI CAATTG 1 cut(s) 674
MvnI CGCG 2 cut(s) 387, 874
MwoI GCNNNNNNNGC 3 cut(s) 10, 442, 546
NdeII GATC 5 cut(s) 97, 145, 472, 568, 910
NlaIII CATG 3 cut(s) 146, 247, 265
NspI RCATGY 1 cut(s) 247
NspV TTCGAA 1 cut(s) 784
PaeR7I CTCGAG 1 cut(s) 764
PciSI GCTCTTC 1 cut(s) 876
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 2 cut(s) 132, 715
PkrI GCNGC 3 cut(s) 39, 68, 438
PleI GAGTC 2 cut(s) 99, 243
PpsI GAGTC 2 cut(s) 99, 243
PpuMI RGGWCCY 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 363
Psp5II RGGWCCY 1 cut(s) 588
PspFI CCCAGC 1 cut(s) 138
PspPI GGNCC 1 cut(s) 588
PspPPI RGGWCCY 1 cut(s) 588
PstI CTGCAG 1 cut(s) 339
PstNI CAGNNNCTG 1 cut(s) 475
PsuI RGATCY 2 cut(s) 97, 472
RsaI GTAC 2 cut(s) 299, 528
RsaNI GTAC 2 cut(s) 298, 527
SacI GAGCTC 1 cut(s) 363
SapI GCTCTTC 1 cut(s) 876
SaqAI TTAA 1 cut(s) 54
SatI GCNGC 3 cut(s) 38, 67, 437
Sau3AI GATC 5 cut(s) 97, 145, 472, 568, 910
Sau96I GGNCC 1 cut(s) 588
SbfI CCTGCAGG 1 cut(s) 339
SchI GAGTC 2 cut(s) 99, 244
SdaI CCTGCAGG 1 cut(s) 339
SduI GDGCHC 2 cut(s) 363, 710
SfaNI GCATC 3 cut(s) 189, 646, 855
SfcI CTRYAG 1 cut(s) 335
Sfr274I CTCGAG 1 cut(s) 764
SfuI TTCGAA 1 cut(s) 784
SinI GGWCC 1 cut(s) 588
SlaI CTCGAG 1 cut(s) 764
SmlI CTYRAG 1 cut(s) 764
SmoI CTYRAG 1 cut(s) 764
Sse8387I CCTGCAGG 1 cut(s) 339
Sse9I AATT 3 cut(s) 674, 876, 906
SstI GAGCTC 1 cut(s) 363
TaaI ACNGT 2 cut(s) 583, 621
TaiI ACGT 1 cut(s) 892
TaqI TCGA 4 cut(s) 233, 753, 765, 784
TaqII GACCGA 1 cut(s) 207
TasI AATT 3 cut(s) 674, 876, 906
TatI WGTACW 2 cut(s) 297, 526
TfiI GAWTC 2 cut(s) 132, 715
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TscAI CASTG 1 cut(s) 263
TseI GCWGC 3 cut(s) 37, 66, 436
TspDTI ATGAA 4 cut(s) 278, 759, 789, 842
TspRI CASTG 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 588
XceI RCATGY 1 cut(s) 247
XhoI CTCGAG 1 cut(s) 764
XmnI GAANNNNTTC 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.