Rorug02G0120900
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
10428945 .. 10436367
7423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0120900.1

Sequence Viewer

Length: 2538 bp
ATGGATATTGTTGAATCTATACAAGATCTTCCAGTTCAGGATCCACCAGTGGAGGAGTTCTCCTCTGTTGATTTGACTTGGACCAAATTTGGCAATTCCGAGAATCATGATGATGCAGCCCTCATTCCTTATGACCGAGTAGACGAATTTATAATCGGTGAATGCTCAAATTTAGAGTGTCCAACGCGATTTCATATTGAGAGGGGAAGAAAAAGAAAGAAGGGCATCTTAAAGGAGTACGCTGATGATGAGTATTTGGAATATAAGCTGTATTGGTGTTCTTTTGGTCCTGAAAATTATGGGGAAGGTGGGGGTATTTTACCTAGCAGAAGATATCGACTCAACACCCGCAATCGCGCTGCTAGACCTCAATCTATGCGGGGCTGTACATGCAATTTTGTGGTGAAGCGTCTCTATGCACGTCCATCACTTGCACTACTTATCTATCATCAGAGGCGTCATGTGAACAAATCTGGTTTTGTTTGCCATGGCCCACTTGATGGAGATGCCATTGGTCCCAGAGCCAAGACAGTTCCATATATCTGTAATGAGATTCAACAACAAACAATGTCTATGATCTATCTGGGTGTTCCTGAAGAGAATATACTAGAAAAACACATTGAGGGGATTGAGCGATATTGTGCTTCAAATGCAAAAGTCAATAGCCTTGCTTCCCAGTATGTCCACAAACTTGGGATGATTATCCAAAGGTCTACCCATGAATTGGATCTTGATGATCAAGCCAGCATCCGCATGTGGGTTGAGCGCAATAAGAAATCCATATTCATTCATCAGGATACTTCAGAAACTGATCCTTTCATTCTGGGGATTCAGACGGAGTGGCAACTGCAACAATTGATACGTTTTGGCCATCGCAGTCTCATTGCAATTGATTCAACATTTGGCATAAAGAGACTTAAGTATCCTTTGTGCACACTTCTTGTCTTTGATTCAAGACAACATGCACTCCCTGTTGCATGGATCATCACACGCAGCTTTTCAAAGCCAGATGTGTCTAAATGGATGACAGCTCTACTTGGTCGAGCTCGTAGTGTTGAGCCTGGATGGAGGGCCAGTGGGTTTTTAATTGATGATGCAGCAGCTGAGACTGATCCCATCAGGGATATTTTTGGTTGTCCTGTCCTATTTTCCCTCTGGCGTGTTCGAAGATCATGGCTGAGGAATATTGTAAAGAAATGCAATAACATTGAAGTTCAACGGGAACTTTTTAAACGTCTGGGTAATATTGTGCATGGCATTTGGGGTGCAAGTGATACAGCGGTTGCCTTAGAACAACTTACCCAGGATTTTGTTGATCAGACTGCTTTTATGGAATATTTTAAAAGTCATTGGGTGCCTAAGATTGAAATGTGGCTTTCAACAATGAGAAGTCTTCCGCTTGCAAGTCAGGAGGCATCTGGTGCTATTGAAGCATATCACGTGAAGTTGAAAGTGAAATTGTTTGATGATTCACATCTTGGAGCACTCCAAAGAGTTGATTGGTTAGTGCACAAACTGACAACTGAGCTGCACTCAGGCTACTGGCTTGACCGATATGCTGATGAATGTGATTCTTTTCAAAACGTCAAGGAAGAATATATTGCTTCTACATCTTGGCACAGGGCACTGCAAATTCCTGATTCTGCTGTTACCTTGGATGATAAAAACCGTCTCTTTGCCAAGGTTTCAAGCCAGAAAGACAGTAGCATTGTACATCTAGTGTGGAATCCCGGATCAGAATTTTCCTTTTGTGACTGTGTGTGGTCGATGCAAGGAAACATTTGCAAGCATGTCATCAAAGTCAATATGATCTGTGAAAGTCATCAAGGTTATCAACCTTCCATGTCTTTCCAGTCATTCAAAGAGTTGCTCGTCAGCCTATCAAAGAAACCAATGGAGGATGCAATTTCACAAGATCTATCAATGGTCTCTGCTGTGCTTGGAGGCATAAAAGTCTCTGTAAAAGTTCAAGGAGTGAGATACAAAAGAGCAAAGGACAAATCAATTTACGGCACGATTTGCTGCACGAATGAGATTCAGAGAAAATTCTTGACTGCCAATTCTAATCCCCTTAACAGAGATATTGGGAACAGTGTGCGATCAAATTTTGGAAGTGCTTTGAATTCAGTCTCTATAAAAGGTCAAGCACTAAGATACGAAATAGAAGACAACAAATCAGTTTGGGTTCGTTCTGGAAAAGAAGATTGTAGAGGTAAAAATCTGTTGAAGCTTAAACCAATGCTGACTTTTGCTCTGTCTCAACCGGATTTTATGTTTTTGCCTAGACTGGTTAAGGAGCTTGATGATGCAGCAGTCAAAGTTCAGAAAGTTTTGTATATCAAACTCGAAGAAACCTTGCAGATCGTGCAGTGGTGGCTGAGGAGGCAAGGGCTAGGACTAGGCTGCGAAGGTTTGTTCTTTTTCTTATACATACTACTTGATGAGAAAGCACAAAAGTTAGCTCTTCAACATTGGCTTGAAGCTGTAAGTTCACACTTCATAATCCCTCAAGAGAATAAGGCTAGATATTTCTTTTGA

Protein Analysis

845

Amino Acids

97.02

Weight (kDa)

8.55

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 152
AccB1I GGYRCC 1 cut(s) 1354
AccB7I CCANNNNNTGG 2 cut(s) 500, 724
AccI GTMKAC 2 cut(s) 141, 713
AccII CGCG 2 cut(s) 187, 357
AciI CCGC 5 cut(s) 349, 379, 751, 1280, 1397
AclWI GGATC 7 cut(s) 35, 48, 735, 806, 989, 1106, 1741
AcoI YGGCCR 1 cut(s) 868
AcsI RAATTY 8 cut(s) 86, 146, 169, 1632, 1739, 2045, 2104, 2122
AcuI CTGAAG 2 cut(s) 615, 786
AcvI CACGTG 1 cut(s) 1441
AcyI GRCGYC 1 cut(s) 457
AfaI GTAC 3 cut(s) 239, 388, 1713
AfiI CCNNNNNNNGG 3 cut(s) 500, 724, 757
AflII CTTAAG 1 cut(s) 917
AjiI CACGTC 1 cut(s) 422
AjnI CCWGG 2 cut(s) 1060, 1302
Alw21I GWGCWC 4 cut(s) 935, 1048, 1486, 1512
Alw26I GTCTC 9 cut(s) 416, 884, 907, 1100, 1676, 1933, 1960, 2134, 2262
Alw44I GTGCAC 2 cut(s) 931, 1508
AlwI GGATC 7 cut(s) 35, 48, 735, 806, 989, 1106, 1741
AlwNI CAGNNNCTG 2 cut(s) 809, 1103
AoxI GGCC 3 cut(s) 490, 868, 1071
ApaLI GTGCAC 2 cut(s) 931, 1508
ApeKI GCWGC 9 cut(s) 116, 359, 993, 1097, 1100, 1528, 2022, 2309, 2403
ApoI RAATTY 8 cut(s) 86, 146, 169, 1632, 1739, 2045, 2104, 2122
AspLEI GCGC 2 cut(s) 359, 768
AspS9I GGNCC 5 cut(s) 81, 287, 491, 515, 1071
AsuC2I CCSGG 1 cut(s) 1731
AsuHPI GGTGA 2 cut(s) 170, 415
AsuII TTCGAA 1 cut(s) 1165
AvaII GGWCC 3 cut(s) 81, 287, 515
BaeGI GKGCMC 3 cut(s) 935, 1512, 1627
BaeI ACNNNNGTAYC 4 cut(s) 905, 938, 1266, 1299
BalI TGGCCA 1 cut(s) 870
BamHI GGATCC 1 cut(s) 40
BanI GGYRCC 1 cut(s) 1354
BanII GRGCYC 1 cut(s) 1048
BarI GAAGNNNNNNTAC 2 cut(s) 588, 620
BbrPI CACGTG 1 cut(s) 1441
BbsI GAAGAC 2 cut(s) 1385, 2172
Bbv12I GWGCWC 4 cut(s) 935, 1048, 1486, 1512
BbvCI CCTCAGC 2 cut(s) 1178, 2378
BbvI GCAGC 9 cut(s) 128, 346, 1005, 1109, 1112, 1515, 2009, 2321, 2390
BccI CCATC 5 cut(s) 433, 494, 879, 1059, 1124
BceAI ACGGC 1 cut(s) 2026
BciT130I CCWGG 2 cut(s) 1062, 1304
BciVI GTATCC 2 cut(s) 790, 933
BclI TGATCA 2 cut(s) 736, 1315
BcnI CCSGG 1 cut(s) 1731
BcoDI GTCTC 9 cut(s) 416, 884, 907, 1100, 1676, 1933, 1960, 2134, 2262
BfaI CTAG 8 cut(s) 324, 363, 608, 1718, 2283, 2393, 2399, 2523
BfrI CTTAAG 1 cut(s) 917
BfuI GTATCC 2 cut(s) 790, 933
BglII AGATCT 2 cut(s) 25, 1915
BisI GCNGC 9 cut(s) 117, 360, 994, 1098, 1101, 1529, 2023, 2310, 2404
BlsI GCNGC 9 cut(s) 118, 361, 995, 1099, 1102, 1530, 2024, 2311, 2405
Bme1390I CCNGG 3 cut(s) 1062, 1304, 1731
Bme18I GGWCC 3 cut(s) 81, 287, 515
BmgBI CACGTC 1 cut(s) 422
BmgT120I GGNCC 5 cut(s) 81, 287, 491, 515, 1071
BmiI GGNNCC 3 cut(s) 42, 517, 1356
BmrFI CCNGG 3 cut(s) 1062, 1304, 1731
BmrI ACTGGG 1 cut(s) 670
BmsI GCATC 9 cut(s) 103, 234, 496, 756, 1084, 1424, 1758, 1891, 2296
BmuI ACTGGG 1 cut(s) 670
BpiI GAAGAC 2 cut(s) 1385, 2172
BplI GAGNNNNNCTC 6 cut(s) 44, 76, 47, 79, 1517, 1549
Bpu10I CCTNAGC 2 cut(s) 1178, 2378
Bpu14I TTCGAA 1 cut(s) 1165
BpuEI CTTGAG 1 cut(s) 2493
BpuMI CCSGG 1 cut(s) 1731
BsaAI YACGTR 1 cut(s) 1441
BsaBI GATNNNNATC 2 cut(s) 701, 1473
BsaHI GRCGYC 1 cut(s) 457
BsaI GGTCTC 1 cut(s) 1933
BsaJI CCNNGG 4 cut(s) 487, 1302, 1653, 1680
BsaWI WCCGGW 1 cut(s) 2263
BsaXI ACNNNNNCTCC 4 cut(s) 951, 981, 1060, 1090
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 724, 757
Bse1I ACTGG 7 cut(s) 32, 47, 676, 1074, 1547, 1852, 2292
Bse3DI GCAATG 1 cut(s) 882
Bse8I GATNNNNATC 2 cut(s) 701, 1473
BseBI CCWGG 2 cut(s) 1062, 1304
BseDI CCNNGG 4 cut(s) 487, 1302, 1653, 1680
BseGI GGATG 6 cut(s) 702, 747, 1029, 1070, 1663, 1906
BseJI GATNNNNATC 2 cut(s) 701, 1473
BseLI CCNNNNNNNGG 3 cut(s) 500, 724, 757
BseMI GCAATG 1 cut(s) 882
BseMII CTCAG 5 cut(s) 1095, 1169, 1515, 1548, 2369
BseNI ACTGG 7 cut(s) 32, 47, 676, 1074, 1547, 1852, 2292
BseRI GAGGAG 3 cut(s) 52, 68, 2395
BseSI GKGCMC 3 cut(s) 935, 1512, 1627
BseXI GCAGC 9 cut(s) 128, 346, 1005, 1109, 1112, 1515, 2009, 2321, 2390
BsgI GTGCAG 3 cut(s) 1514, 2008, 2387
Bsh1236I CGCG 2 cut(s) 187, 357
BshFI GGCC 3 cut(s) 492, 870, 1073
BshNI GGYRCC 1 cut(s) 1354
BsiHKAI GWGCWC 4 cut(s) 935, 1048, 1486, 1512
BsiSI CCGG 2 cut(s) 1731, 2264
BslFI GGGAC 1 cut(s) 501
BslI CCNNNNNNNGG 3 cut(s) 500, 724, 757
BsmAI GTCTC 9 cut(s) 416, 884, 907, 1100, 1676, 1933, 1960, 2134, 2262
BsmBI CGTCTC 2 cut(s) 416, 1676
BsmFI GGGAC 1 cut(s) 501
BsmI GAATGC 1 cut(s) 167
BsnI GGCC 3 cut(s) 492, 870, 1073
Bso31I GGTCTC 1 cut(s) 1933
Bsp119I TTCGAA 1 cut(s) 1165
Bsp1286I GDGCHC 5 cut(s) 935, 1048, 1486, 1512, 1627
Bsp1407I TGTACA 2 cut(s) 386, 1711
Bsp19I CCATGG 1 cut(s) 487
BspACI CCGC 5 cut(s) 349, 379, 751, 1280, 1397
BspANI GGCC 3 cut(s) 492, 870, 1073
BspCNI CTCAG 5 cut(s) 1096, 1170, 1516, 1547, 2370
BspFNI CGCG 2 cut(s) 187, 357
BspHI TCATGA 1 cut(s) 106
BspLI GGNNCC 3 cut(s) 42, 517, 1356
BspPI GGATC 7 cut(s) 35, 48, 735, 806, 989, 1106, 1741
BspQI GCTCTTC 1 cut(s) 2469
BspT104I TTCGAA 1 cut(s) 1165
BspT107I GGYRCC 1 cut(s) 1354
BspTI CTTAAG 1 cut(s) 917
BspTNI GGTCTC 1 cut(s) 1933
BsrDI GCAATG 1 cut(s) 882
BsrGI TGTACA 2 cut(s) 386, 1711
BsrI ACTGG 7 cut(s) 32, 47, 676, 1074, 1547, 1852, 2292
BssECI CCNNGG 4 cut(s) 487, 1302, 1653, 1680
BssNI GRCGYC 1 cut(s) 457
BssT1I CCWWGG 3 cut(s) 487, 1653, 1680
Bst2UI CCWGG 2 cut(s) 1062, 1304
Bst4CI ACNGT 5 cut(s) 532, 1670, 1703, 1757, 2093
Bst6I CTCTTC 2 cut(s) 591, 2469
BstACI GRCGYC 1 cut(s) 457
BstAFI CTTAAG 1 cut(s) 917
BstAPI GCANNNNNTGC 3 cut(s) 1421, 2019, 2365
BstAUI TGTACA 2 cut(s) 386, 1711
BstBAI YACGTR 1 cut(s) 1441
BstBI TTCGAA 1 cut(s) 1165
BstC8I GCNNGC 3 cut(s) 745, 1401, 1787
BstDEI CTNAG 8 cut(s) 1104, 1178, 1288, 1359, 1524, 1534, 2150, 2378
BstDSI CCRYGG 1 cut(s) 487
BstF5I GGATG 6 cut(s) 702, 747, 1029, 1070, 1663, 1906
BstFNI CGCG 2 cut(s) 187, 357
BstHHI GCGC 2 cut(s) 359, 768
BstMAI GTCTC 9 cut(s) 416, 884, 907, 1100, 1676, 1933, 1960, 2134, 2262
BstMWI GCNNNNNNNGC 8 cut(s) 390, 650, 1421, 1430, 2019, 2365, 2374, 2383
BstNI CCWGG 2 cut(s) 1062, 1304
BstNSI RCATGY 4 cut(s) 393, 757, 965, 1793
BstSCI CCNGG 3 cut(s) 1060, 1302, 1729
BstSLI GKGCMC 3 cut(s) 935, 1512, 1627
BstUI CGCG 2 cut(s) 187, 357
BstV1I GCAGC 9 cut(s) 128, 346, 1005, 1109, 1112, 1515, 2009, 2321, 2390
BstV2I GAAGAC 2 cut(s) 1385, 2172
BstX2I RGATCY 4 cut(s) 25, 40, 727, 1915
BstXI CCANNNNNNTGG 1 cut(s) 692
BstYI RGATCY 4 cut(s) 25, 40, 727, 1915
BsuI GTATCC 2 cut(s) 790, 933
BsuRI GGCC 3 cut(s) 492, 870, 1073
BtgI CCRYGG 1 cut(s) 487
BtgZI GCGATG 1 cut(s) 857
BtrI CACGTC 1 cut(s) 422
BtsCI GGATG 6 cut(s) 702, 747, 1029, 1070, 1663, 1906
BtsI GCAGTG 2 cut(s) 1625, 2375
BtsIMutI CAGTG 5 cut(s) 54, 1081, 1625, 2098, 2375
Cac8I GCNNGC 3 cut(s) 745, 1401, 1787
CaiI CAGNNNCTG 2 cut(s) 809, 1103
CciI TCATGA 1 cut(s) 106
CfoI GCGC 2 cut(s) 359, 768
Cfr13I GGNCC 5 cut(s) 81, 287, 491, 515, 1071
CseI GACGC 2 cut(s) 398, 446
Csp6I GTAC 3 cut(s) 238, 387, 1712
CviQI GTAC 3 cut(s) 238, 387, 1712
DdeI CTNAG 8 cut(s) 1104, 1178, 1288, 1359, 1524, 1534, 2150, 2378
DraI TTTAAA 2 cut(s) 1231, 1342
EaeI YGGCCR 1 cut(s) 868
Eam1104I CTCTTC 2 cut(s) 591, 2469
EarI CTCTTC 2 cut(s) 591, 2469
Ecl136II GAGCTC 1 cut(s) 1046
Eco130I CCWWGG 3 cut(s) 487, 1653, 1680
Eco24I GRGCYC 1 cut(s) 1048
Eco31I GGTCTC 1 cut(s) 1933
Eco32I GATATC 1 cut(s) 335
Eco47I GGWCC 3 cut(s) 81, 287, 515
Eco53kI GAGCTC 1 cut(s) 1046
Eco57I CTGAAG 2 cut(s) 615, 786
Eco72I CACGTG 1 cut(s) 1441
EcoICRI GAGCTC 1 cut(s) 1046
EcoRI GAATTC 1 cut(s) 2122
EcoRII CCWGG 2 cut(s) 1060, 1302
EcoRV GATATC 1 cut(s) 335
EcoT14I CCWWGG 3 cut(s) 487, 1653, 1680
EcoT38I GRGCYC 1 cut(s) 1048
ErhI CCWWGG 3 cut(s) 487, 1653, 1680
Esp3I CGTCTC 2 cut(s) 416, 1676
FalI AAGNNNNNCTT 2 cut(s) 212, 244
FaqI GGGAC 1 cut(s) 501
FauI CCCGC 2 cut(s) 356, 372
FbaI TGATCA 2 cut(s) 736, 1315
FblI GTMKAC 2 cut(s) 141, 713
Fnu4HI GCNGC 9 cut(s) 117, 360, 994, 1098, 1101, 1529, 2023, 2310, 2404
FokI GGATG 6 cut(s) 709, 734, 1036, 1077, 1670, 1913
FriOI GRGCYC 1 cut(s) 1048
Fsp4HI GCNGC 9 cut(s) 117, 360, 994, 1098, 1101, 1529, 2023, 2310, 2404
FspBI CTAG 8 cut(s) 324, 363, 608, 1718, 2283, 2393, 2399, 2523
GlaI GCGC 2 cut(s) 358, 767
GluI GCNGC 9 cut(s) 117, 360, 994, 1098, 1101, 1529, 2023, 2310, 2404
HaeIII GGCC 3 cut(s) 492, 870, 1073
HapII CCGG 2 cut(s) 1731, 2264
HgaI GACGC 2 cut(s) 398, 446
HhaI GCGC 2 cut(s) 359, 768
Hin1I GRCGYC 1 cut(s) 457
Hin6I GCGC 2 cut(s) 357, 766
HinP1I GCGC 2 cut(s) 357, 766
HindIII AAGCTT 1 cut(s) 2228
HpaII CCGG 2 cut(s) 1731, 2264
HphI GGTGA 2 cut(s) 170, 415
Hpy166II GTNNAC 7 cut(s) 142, 466, 685, 714, 933, 1510, 2492
Hpy188I TCNGA 8 cut(s) 100, 453, 805, 834, 1320, 1738, 2040, 2325
Hpy8I GTNNAC 7 cut(s) 142, 466, 685, 714, 933, 1510, 2492
HpyAV CCTTC 4 cut(s) 214, 299, 1848, 2402
HpyCH4III ACNGT 5 cut(s) 532, 1670, 1703, 1757, 2093
HpyCH4IV ACGT 5 cut(s) 421, 862, 1234, 1440, 1584
HpyF10VI GCNNNNNNNGC 8 cut(s) 390, 650, 1421, 1430, 2019, 2365, 2374, 2383
HpyF3I CTNAG 8 cut(s) 1104, 1178, 1288, 1359, 1524, 1534, 2150, 2378
HpySE526I ACGT 5 cut(s) 421, 862, 1234, 1440, 1584
Hsp92I GRCGYC 1 cut(s) 457
HspAI GCGC 2 cut(s) 357, 766
Ksp22I TGATCA 2 cut(s) 736, 1315
LguI GCTCTTC 1 cut(s) 2469
LmnI GCTCC 2 cut(s) 1481, 2296
Lsp1109I GCAGC 9 cut(s) 128, 346, 1005, 1109, 1112, 1515, 2009, 2321, 2390
LweI GCATC 9 cut(s) 103, 234, 496, 756, 1084, 1424, 1758, 1891, 2296
MaeI CTAG 8 cut(s) 324, 363, 608, 1718, 2283, 2393, 2399, 2523
MaeII ACGT 5 cut(s) 421, 862, 1234, 1440, 1584
MaeIII GTNAC 2 cut(s) 1648, 1751
MfeI CAATTG 2 cut(s) 854, 888
MflI RGATCY 4 cut(s) 25, 40, 727, 1915
MhlI GDGCHC 5 cut(s) 935, 1048, 1486, 1512, 1627
MlsI TGGCCA 1 cut(s) 870
MluNI TGGCCA 1 cut(s) 870
MlyI GAGTC 1 cut(s) 333
MmeI TCCRAC 1 cut(s) 206
Mox20I TGGCCA 1 cut(s) 870
MscI TGGCCA 1 cut(s) 870
MseI TTAA 8 cut(s) 230, 918, 1085, 1230, 1341, 2073, 2232, 2292
MslI CAYNNNNRTG 2 cut(s) 111, 752
Msp20I TGGCCA 1 cut(s) 870
MspA1I CMGCKG 2 cut(s) 1103, 1280
MspCI CTTAAG 1 cut(s) 917
MspI CCGG 2 cut(s) 1731, 2264
MspR9I CCNGG 3 cut(s) 1062, 1304, 1731
MunI CAATTG 2 cut(s) 854, 888
Mva1269I GAATGC 1 cut(s) 167
MvaI CCWGG 2 cut(s) 1062, 1304
MvnI CGCG 2 cut(s) 187, 357
MwoI GCNNNNNNNGC 8 cut(s) 390, 650, 1421, 1430, 2019, 2365, 2374, 2383
NciI CCSGG 1 cut(s) 1731
NcoI CCATGG 1 cut(s) 487
NlaIV GGNNCC 3 cut(s) 42, 517, 1356
NmuCI GTSAC 1 cut(s) 1751
NspI RCATGY 4 cut(s) 393, 757, 965, 1793
NspV TTCGAA 1 cut(s) 1165
PagI TCATGA 1 cut(s) 106
PciSI GCTCTTC 1 cut(s) 2469
PctI GAATGC 1 cut(s) 167
PflMI CCANNNNNTGG 2 cut(s) 500, 724
PfoI TCCNGGA 1 cut(s) 1729
PkrI GCNGC 9 cut(s) 118, 361, 995, 1099, 1102, 1530, 2024, 2311, 2405
PleI GAGTC 1 cut(s) 333
PmaCI CACGTG 1 cut(s) 1441
PmlI CACGTG 1 cut(s) 1441
PpsI GAGTC 1 cut(s) 333
Ppu21I YACGTR 1 cut(s) 1441
PsiI TTATAA 1 cut(s) 152
Psp124BI GAGCTC 1 cut(s) 1048
Psp6I CCWGG 2 cut(s) 1060, 1302
PspCI CACGTG 1 cut(s) 1441
PspGI CCWGG 2 cut(s) 1060, 1302
PspN4I GGNNCC 3 cut(s) 42, 517, 1356
PspPI GGNCC 5 cut(s) 81, 287, 491, 515, 1071
PstNI CAGNNNCTG 2 cut(s) 809, 1103
PsuI RGATCY 4 cut(s) 25, 40, 727, 1915
PvuII CAGCTG 1 cut(s) 1103
RsaI GTAC 3 cut(s) 239, 388, 1713
RsaNI GTAC 3 cut(s) 238, 387, 1712
RseI CAYNNNNRTG 2 cut(s) 111, 752
SacI GAGCTC 1 cut(s) 1048
SapI GCTCTTC 1 cut(s) 2469
SaqAI TTAA 8 cut(s) 230, 918, 1085, 1230, 1341, 2073, 2232, 2292
SatI GCNGC 9 cut(s) 117, 360, 994, 1098, 1101, 1529, 2023, 2310, 2404
Sau96I GGNCC 5 cut(s) 81, 287, 491, 515, 1071
SchI GAGTC 1 cut(s) 333
ScrFI CCNGG 3 cut(s) 1062, 1304, 1731
SduI GDGCHC 5 cut(s) 935, 1048, 1486, 1512, 1627
SfaNI GCATC 9 cut(s) 103, 234, 496, 756, 1084, 1424, 1758, 1891, 2296
SfuI TTCGAA 1 cut(s) 1165
SinI GGWCC 3 cut(s) 81, 287, 515
SmiMI CAYNNNNRTG 2 cut(s) 111, 752
SmlI CTYRAG 2 cut(s) 917, 2508
SmoI CTYRAG 2 cut(s) 917, 2508
SsiI CCGC 5 cut(s) 349, 379, 751, 1280, 1397
SspI AATATT 3 cut(s) 1186, 1246, 1337
SspMI CTAG 8 cut(s) 324, 363, 608, 1718, 2283, 2393, 2399, 2523
SstI GAGCTC 1 cut(s) 1048
StyD4I CCNGG 3 cut(s) 1060, 1302, 1729
StyI CCWWGG 3 cut(s) 487, 1653, 1680
TaaI ACNGT 5 cut(s) 532, 1670, 1703, 1757, 2093
TaiI ACGT 5 cut(s) 424, 865, 1237, 1443, 1587
TaqI TCGA 5 cut(s) 337, 1042, 1165, 1766, 2346
TaqII GACCGA 2 cut(s) 150, 1566
TatI WGTACW 2 cut(s) 386, 1711
Tru1I TTAA 8 cut(s) 230, 918, 1085, 1230, 1341, 2073, 2232, 2292
Tru9I TTAA 8 cut(s) 230, 918, 1085, 1230, 1341, 2073, 2232, 2292
TscAI CASTG 5 cut(s) 54, 1081, 1632, 2098, 2375
TseFI GTSAC 1 cut(s) 1751
TseI GCWGC 9 cut(s) 116, 359, 993, 1097, 1100, 1528, 2022, 2309, 2403
Tsp45I GTSAC 1 cut(s) 1751
TspDTI ATGAA 7 cut(s) 182, 735, 775, 779, 808, 1578, 2488
TspGWI ACGGA 1 cut(s) 851
TspRI CASTG 5 cut(s) 54, 1081, 1632, 2098, 2375
Van91I CCANNNNNTGG 2 cut(s) 500, 724
Vha464I CTTAAG 1 cut(s) 917
VneI GTGCAC 2 cut(s) 931, 1508
VpaK11BI GGWCC 3 cut(s) 81, 287, 515
XapI RAATTY 8 cut(s) 86, 146, 169, 1632, 1739, 2045, 2104, 2122
XceI RCATGY 4 cut(s) 393, 757, 965, 1793
XmiI GTMKAC 2 cut(s) 141, 713
XspI CTAG 8 cut(s) 324, 363, 608, 1718, 2283, 2393, 2399, 2523
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.