Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000408

Physical Location & Seq

Genomic Coordinates Forward (+)

6223669 .. 6225686

Gene Structure 2018 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G007180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGAGTCTGAACTTTCTGGGAGGAGCACCTTTTCAACTCCTATACGATGGTGTTAGGGTAGCCATAGGTAGAACTACCAAGTTCAAAGCCCTCCTCTTAAATCTCGAATCGACGCTAGACTGTTTGCAACCACGAGTCATCCAGCAGATAAGAGACCATAATGTGGAGCTGAATCTCCCAAACGATATAATTCAAGACCTGCAAGTGAAAATGGATGATGGTGTGGCACTCATTGCCAATTTATCTAGGCTTAGCGTGTGGAACTGTCGCGTATGGGGGGACTGTTGCAACTGCATGAAGCCTAGCTATGCAGACCAACTTGCTGCATTGGATAGGTCTCTTAGACGACTGTTGGAGATACTAAAGCTTGAGCAGATGAGGAACGTGGTGGAGCTCTTGCTTTTGGCAAGGAGAAGTAATGACCGACAAGATGACTTGGAGAGAAGACAGTTGGAAATTCTGAAAGCGCTGCAAGAAACCGGGGATATGTTAAGAGCGCAGCAGGAAGTAATGGAGAGAATTGAAAGGAATGGTGCTGCATCTTCAGACAGAGGAGGGTCAGCTCCTGCTCCTGCTCTAGGAACAGTATTTAGGGTGTTGTTTGATGTTGTTATCAGAGTAAAGGTCAAGAATATGATGTATGAGCGACTCCTCAAAGATTTTGAATCCACTCTTGAATGCTTGAAGCCACTTATAGAAGAGATGGTGGAGTCTAACAAGTTGCTGCATCTTTCAAATGAGGAACAAGAATATTTCATAATGCAAATGGAAAAGGGTGTAGAGTTAATTCACCAGTGCTCTGAGGCTTGCAAGAGAGGAATAAGGTATAAAAAGTACGAATACACCAAGAAACTTCTGGGATTGGATGCATGTCTTCAAAGGCTTTTCATTGAACTCAAAGAGCAGGTAGTAAGGAATGTGAAGGAGGCCTTGGTGCTTATAAGTAACTTGGAAAAAGAGATCACAGAAATTGAAGGGGTTGTTGTGGTACAAAGTGATGAAATTGAGTGTTCGATTCCAGCACCTCAACCCCGATCACCTTTAGTTGGAGAGGATTTACAAAATGTGCAGATAAATCAAGAGGTGATCGAGGCTCTATGTCCCCCCCTTGTATTCTGTGAAGATCAAGAGGTGATCGAGGAGACATTCGATGCAGTAAGCAACTTAGAAGAGGAGATCAAGGAAATTAGAGAAGTTCATGTGGTACAAAATAATGAAGTACAAAGTAAAGGTCCTCAACCTTCATTGCCTACAGCTGGATCCAGTGTACAAAGTATGCAGGGAACAAGGGATGTGATCAAGGAAAGATGGGACTCGGAAAAGTTGCCGGATATCAAGCAAATTAAAGGGAAAGGCTTGTTCGAATATCCGGTTGCTGGTGAATATGACCTTCCACCATTTCCAGTGGGACTTGCACTGGAACGAGAAGATCACGCTGATGCATTCAGTAATGCATCATTGGAAGAACCGGTTGATGAATTGGATATGCATGTCAGCTACTTGAAACGGAAGCTTTTACATGGTGGTCACTTAGCCATTGTGCTGACGGGACCTGAAGGATGCGGGAAAACTAGATTGGCAGAAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002237 GO:0002239 GO:0002682 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009889 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032350 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043902 GO:0044424 GO:0044464 GO:0045088 GO:0046885 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071216 GO:0071219 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calmodulin_bind

Protein Analysis

529

Amino Acids

59.95

Weight (kDa)

4.99

Isoelectric Point (pI)

60.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	8 - 135	3.6e-12	Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8	PF05659	191 - 321	8.2e-19	Arabidopsis broad-spectrum mildew resistance protein RPW8

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica	MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica	Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis	pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis	RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata	RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora	Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii	Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa	Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha	Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana	Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	941
Acc36I	ACCTGC	2 cut(s)	207, 895
AccB7I	CCANNNNNTGG	1 cut(s)	163
AccII	CGCG	1 cut(s)	270
AciI	CCGC	1 cut(s)	1563
AclWI	GGATC	2 cut(s)	1254, 1267
AcsI	RAATTY	1 cut(s)	456
AcuI	CTGAAG	2 cut(s)	528, 1575
AfaI	GTAC	5 cut(s)	836, 990, 1206, 1221, 1269
AfeI	AGCGCT	1 cut(s)	468
AfiI	CCNNNNNNNGG	5 cut(s)	163, 578, 1046, 1256, 1376
AgeI	ACCGGT	1 cut(s)	1468
AjuI	GAANNNNNNNTTGG	3 cut(s)	914, 946, 1559
AluBI	AGCT	8 cut(s)	169, 306, 367, 394, 563, 1256, 1497, 1513
AluI	AGCT	8 cut(s)	169, 306, 367, 394, 563, 1256, 1497, 1513
Alw21I	GWGCWC	3 cut(s)	28, 396, 800
Alw26I	GTCTC	3 cut(s)	147, 342, 1136
AlwI	GGATC	2 cut(s)	1254, 1267
AlwNI	CAGNNNCTG	1 cut(s)	566
Aor51HI	AGCGCT	1 cut(s)	468
AoxI	GGCC	1 cut(s)	927
ApeKI	GCWGC	5 cut(s)	323, 469, 499, 536, 724
ApoI	RAATTY	1 cut(s)	456
ArsI	GACNNNNNNTTYG	2 cut(s)	1216, 1248
AsiGI	ACCGGT	1 cut(s)	1468
AspLEI	GCGC	2 cut(s)	469, 499
AspS9I	GGNCC	2 cut(s)	1232, 1550
AsuC2I	CCSGG	1 cut(s)	481
AsuHPI	GGTGA	5 cut(s)	782, 1029, 1096, 1144, 1391
AsuII	TTCGAA	1 cut(s)	1362
AvaII	GGWCC	2 cut(s)	1232, 1550
BamHI	GGATCC	1 cut(s)	1259
BanII	GRGCYC	1 cut(s)	396
BauI	CACGAG	1 cut(s)	132
BbsI	GAAGAC	2 cut(s)	451, 866
Bbv12I	GWGCWC	3 cut(s)	28, 396, 800
BbvI	GCAGC	5 cut(s)	310, 456, 511, 523, 711
BccI	CCATC	4 cut(s)	41, 212, 697, 1302
BclI	TGATCA	1 cut(s)	1296
BcnI	CCSGG	1 cut(s)	481
BcoDI	GTCTC	3 cut(s)	147, 342, 1136
BfaI	CTAG	5 cut(s)	116, 246, 303, 578, 1572
BfmI	CTRYAG	1 cut(s)	1251
BfoI	RGCGCY	1 cut(s)	470
BfuAI	ACCTGC	2 cut(s)	207, 895
BisI	GCNGC	5 cut(s)	324, 470, 500, 537, 725
BlpI	GCTNAGC	1 cut(s)	251
BlsI	GCNGC	5 cut(s)	325, 471, 501, 538, 726
Bme1390I	CCNGG	1 cut(s)	481
Bme18I	GGWCC	2 cut(s)	1232, 1550
BmgT120I	GGNCC	2 cut(s)	1232, 1550
BmiI	GGNNCC	2 cut(s)	1261, 1551
BmrFI	CCNGG	1 cut(s)	481
BmsI	GCATC	7 cut(s)	548, 736, 856, 1141, 1429, 1463, 1550
BpiI	GAAGAC	2 cut(s)	451, 866
Bpu1102I	GCTNAGC	1 cut(s)	251
Bpu14I	TTCGAA	1 cut(s)	1362
BpuEI	CTTGAG	1 cut(s)	389
BpuMI	CCSGG	1 cut(s)	481
BsaI	GGTCTC	2 cut(s)	147, 342
BsaJI	CCNNGG	2 cut(s)	480, 930
BsaWI	WCCGGW	2 cut(s)	1369, 1468
Bsc4I	CCNNNNNNNGG	5 cut(s)	163, 578, 1046, 1256, 1376
Bse118I	RCCGGY	1 cut(s)	1468
Bse1I	ACTGG	4 cut(s)	793, 1263, 1403, 1422
Bse3DI	GCAATG	2 cut(s)	231, 1244
BseDI	CCNNGG	2 cut(s)	480, 930
BseGI	GGATG	5 cut(s)	138, 220, 871, 1297, 1565
BseLI	CCNNNNNNNGG	5 cut(s)	163, 578, 1046, 1256, 1376
BseMI	GCAATG	2 cut(s)	231, 1244
BseMII	CTCAG	1 cut(s)	792
BseNI	ACTGG	4 cut(s)	793, 1263, 1403, 1422
BseRI	GAGGAG	6 cut(s)	36, 83, 567, 641, 1154, 1187
BseXI	GCAGC	5 cut(s)	310, 456, 511, 523, 711
BsgI	GTGCAG	1 cut(s)	1088
Bsh1236I	CGCG	1 cut(s)	270
BshFI	GGCC	1 cut(s)	929
BshTI	ACCGGT	1 cut(s)	1468
BsiHKAI	GWGCWC	3 cut(s)	28, 396, 800
BsiSI	CCGG	4 cut(s)	480, 1328, 1370, 1469
BslFI	GGGAC	5 cut(s)	293, 1086, 1325, 1422, 1563
BslI	CCNNNNNNNGG	5 cut(s)	163, 578, 1046, 1256, 1376
BsmAI	GTCTC	3 cut(s)	147, 342, 1136
BsmFI	GGGAC	5 cut(s)	293, 1086, 1325, 1422, 1563
BsmI	GAATGC	2 cut(s)	683, 1442
BsnI	GGCC	1 cut(s)	929
Bso31I	GGTCTC	2 cut(s)	147, 342
Bsp119I	TTCGAA	1 cut(s)	1362
Bsp1286I	GDGCHC	3 cut(s)	28, 396, 800
Bsp1407I	TGTACA	1 cut(s)	1267
Bsp143I	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
Bsp1720I	GCTNAGC	1 cut(s)	251
BspACI	CCGC	1 cut(s)	1563
BspANI	GGCC	1 cut(s)	929
BspCNI	CTCAG	1 cut(s)	793
BspFNI	CGCG	1 cut(s)	270
BspLI	GGNNCC	2 cut(s)	1261, 1551
BspMI	ACCTGC	2 cut(s)	207, 895
BspPI	GGATC	2 cut(s)	1254, 1267
BspT104I	TTCGAA	1 cut(s)	1362
BspTNI	GGTCTC	2 cut(s)	147, 342
BsrDI	GCAATG	2 cut(s)	231, 1244
BsrFI	RCCGGY	1 cut(s)	1468
BsrGI	TGTACA	1 cut(s)	1267
BsrI	ACTGG	4 cut(s)	793, 1263, 1403, 1422
BssAI	RCCGGY	1 cut(s)	1468
BssECI	CCNNGG	2 cut(s)	480, 930
BssMI	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
BssSI	CACGAG	1 cut(s)	132
BssT1I	CCWWGG	1 cut(s)	930
Bst2BI	CACGAG	1 cut(s)	132
Bst4CI	ACNGT	6 cut(s)	122, 266, 284, 351, 450, 586
Bst6I	CTCTTC	2 cut(s)	693, 1164
BstAPI	GCANNNNNTGC	1 cut(s)	233
BstAUI	TGTACA	1 cut(s)	1267
BstBI	TTCGAA	1 cut(s)	1362
BstC8I	GCNNGC	1 cut(s)	808
BstDEI	CTNAG	5 cut(s)	251, 341, 801, 1165, 1531
BstENI	CCTNNNNNAGG	1 cut(s)	576
BstF5I	GGATG	5 cut(s)	138, 220, 871, 1297, 1565
BstFNI	CGCG	1 cut(s)	270
BstH2I	RGCGCY	1 cut(s)	470
BstHHI	GCGC	2 cut(s)	469, 499
BstKTI	GATC	9 cut(s)	963, 1037, 1089, 1126, 1137, 1179, 1262, 1299, 1432
BstMAI	GTCTC	3 cut(s)	147, 342, 1136
BstMBI	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
BstMWI	GCNNNNNNNGC	1 cut(s)	233
BstNSI	RCATGY	2 cut(s)	873, 1493
BstSCI	CCNGG	1 cut(s)	479
BstSFI	CTRYAG	1 cut(s)	1251
BstUI	CGCG	1 cut(s)	270
BstV1I	GCAGC	5 cut(s)	310, 456, 511, 523, 711
BstV2I	GAAGAC	2 cut(s)	451, 866
BstX2I	RGATCY	1 cut(s)	1259
BstYI	RGATCY	1 cut(s)	1259
BsuRI	GGCC	1 cut(s)	929
BtsCI	GGATG	5 cut(s)	138, 220, 871, 1297, 1565
BtsIMutI	CAGTG	4 cut(s)	800, 1270, 1410, 1415
BveI	ACCTGC	2 cut(s)	207, 895
Cac8I	GCNNGC	1 cut(s)	808
CaiI	CAGNNNCTG	1 cut(s)	566
CfoI	GCGC	2 cut(s)	469, 499
Cfr10I	RCCGGY	1 cut(s)	1468
Cfr13I	GGNCC	2 cut(s)	1232, 1550
CseI	GACGC	1 cut(s)	121
Csp6I	GTAC	5 cut(s)	835, 989, 1205, 1220, 1268
CspAI	ACCGGT	1 cut(s)	1468
CviAII	CATG	5 cut(s)	295, 870, 1199, 1490, 1520
CviQI	GTAC	5 cut(s)	835, 989, 1205, 1220, 1268
DdeI	CTNAG	5 cut(s)	251, 341, 801, 1165, 1531
DpnI	GATC	9 cut(s)	962, 1036, 1088, 1125, 1136, 1178, 1261, 1298, 1431
DpnII	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
Eam1104I	CTCTTC	2 cut(s)	693, 1164
EarI	CTCTTC	2 cut(s)	693, 1164
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	1 cut(s)	930
Eco147I	AGGCCT	1 cut(s)	929
Eco24I	GRGCYC	1 cut(s)	396
Eco31I	GGTCTC	2 cut(s)	147, 342
Eco32I	GATATC	1 cut(s)	1333
Eco47I	GGWCC	2 cut(s)	1232, 1550
Eco47III	AGCGCT	1 cut(s)	468
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	2 cut(s)	528, 1575
EcoICRI	GAGCTC	1 cut(s)	394
EcoNI	CCTNNNNNAGG	1 cut(s)	576
EcoO109I	RGGNCCY	2 cut(s)	1232, 1550
EcoRV	GATATC	1 cut(s)	1333
EcoT14I	CCWWGG	1 cut(s)	930
EcoT22I	ATGCAT	4 cut(s)	871, 1444, 1456, 1491
EcoT38I	GRGCYC	1 cut(s)	396
ErhI	CCWWGG	1 cut(s)	930
FaeI	CATG	5 cut(s)	298, 873, 1202, 1493, 1523
FalI	AAGNNNNNCTT	2 cut(s)	914, 946
FaqI	GGGAC	5 cut(s)	293, 1086, 1325, 1422, 1563
FatI	CATG	5 cut(s)	294, 869, 1198, 1489, 1519
FauI	CCCGC	1 cut(s)	1556
FbaI	TGATCA	1 cut(s)	1296
Fnu4HI	GCNGC	5 cut(s)	324, 470, 500, 537, 725
FokI	GGATG	5 cut(s)	125, 227, 878, 1304, 1572
FriOI	GRGCYC	1 cut(s)	396
Fsp4HI	GCNGC	5 cut(s)	324, 470, 500, 537, 725
FspBI	CTAG	5 cut(s)	116, 246, 303, 578, 1572
GlaI	GCGC	2 cut(s)	468, 498
GluI	GCNGC	5 cut(s)	324, 470, 500, 537, 725
HaeII	RGCGCY	1 cut(s)	470
HaeIII	GGCC	1 cut(s)	929
HapII	CCGG	4 cut(s)	480, 1328, 1370, 1469
HgaI	GACGC	1 cut(s)	121
HhaI	GCGC	2 cut(s)	469, 499
Hin1II	CATG	5 cut(s)	298, 873, 1202, 1493, 1523
Hin6I	GCGC	2 cut(s)	467, 497
HinP1I	GCGC	2 cut(s)	467, 497
HindIII	AAGCTT	2 cut(s)	365, 1511
HinfI	GANTC	9 cut(s)	4, 107, 135, 172, 648, 665, 710, 1015, 1313
HpaII	CCGG	4 cut(s)	480, 1328, 1370, 1469
HphI	GGTGA	5 cut(s)	782, 1029, 1096, 1144, 1391
Hpy166II	GTNNAC	1 cut(s)	1268
Hpy188I	TCNGA	6 cut(s)	9, 462, 547, 617, 802, 1318
Hpy188III	TCNNGA	6 cut(s)	104, 194, 628, 674, 1079, 1127
Hpy8I	GTNNAC	1 cut(s)	1268
Hpy99I	CGWCG	1 cut(s)	115
HpyAV	CCTTC	5 cut(s)	916, 968, 1251, 1400, 1550
HpyCH4III	ACNGT	6 cut(s)	122, 266, 284, 351, 450, 586
HpyCH4IV	ACGT	1 cut(s)	384
HpyF10VI	GCNNNNNNNGC	1 cut(s)	233
HpyF3I	CTNAG	5 cut(s)	251, 341, 801, 1165, 1531
HpySE526I	ACGT	1 cut(s)	384
Hsp92II	CATG	5 cut(s)	298, 873, 1202, 1493, 1523
HspAI	GCGC	2 cut(s)	467, 497
Ksp22I	TGATCA	1 cut(s)	1296
Kzo9I	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
LmnI	GCTCC	5 cut(s)	23, 166, 391, 568, 574
Lsp1109I	GCAGC	5 cut(s)	310, 456, 511, 523, 711
LweI	GCATC	7 cut(s)	548, 736, 856, 1141, 1429, 1463, 1550
MaeI	CTAG	5 cut(s)	116, 246, 303, 578, 1572
MaeII	ACGT	1 cut(s)	384
MaeIII	GTNAC	2 cut(s)	944, 1526
MalI	GATC	9 cut(s)	962, 1036, 1088, 1125, 1136, 1178, 1261, 1298, 1431
MboI	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
MboII	GAAGA	8 cut(s)	456, 534, 710, 866, 1133, 1181, 1439, 1475
MflI	RGATCY	1 cut(s)	1259
MhlI	GDGCHC	3 cut(s)	28, 396, 800
MlyI	GAGTC	5 cut(s)	13, 144, 642, 719, 1307
MmeI	TCCRAC	3 cut(s)	333, 432, 1027
Mph1103I	ATGCAT	4 cut(s)	871, 1444, 1456, 1491
MseI	TTAA	4 cut(s)	98, 491, 785, 1344
MslI	CAYNNNNRTG	1 cut(s)	1437
MspA1I	CMGCKG	1 cut(s)	1256
MspI	CCGG	4 cut(s)	480, 1328, 1370, 1469
MspR9I	CCNGG	1 cut(s)	481
Mva1269I	GAATGC	2 cut(s)	683, 1442
MvnI	CGCG	1 cut(s)	270
MwoI	GCNNNNNNNGC	1 cut(s)	233
NciI	CCSGG	1 cut(s)	481
NdeII	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
NlaIII	CATG	5 cut(s)	298, 873, 1202, 1493, 1523
NlaIV	GGNNCC	2 cut(s)	1261, 1551
NmuCI	GTSAC	1 cut(s)	1526
NsiI	ATGCAT	4 cut(s)	871, 1444, 1456, 1491
NspI	RCATGY	2 cut(s)	873, 1493
NspV	TTCGAA	1 cut(s)	1362
PceI	AGGCCT	1 cut(s)	929
PctI	GAATGC	2 cut(s)	683, 1442
PfeI	GAWTC	4 cut(s)	107, 172, 665, 1015
PflMI	CCANNNNNTGG	1 cut(s)	163
PinAI	ACCGGT	1 cut(s)	1468
PkrI	GCNGC	5 cut(s)	325, 471, 501, 538, 726
PleI	GAGTC	5 cut(s)	12, 143, 642, 718, 1307
PpsI	GAGTC	5 cut(s)	12, 143, 642, 718, 1307
PpuMI	RGGWCCY	2 cut(s)	1232, 1550
PsiI	TTATAA	1 cut(s)	941
Psp124BI	GAGCTC	1 cut(s)	396
Psp5II	RGGWCCY	2 cut(s)	1232, 1550
PspN4I	GGNNCC	2 cut(s)	1261, 1551
PspPI	GGNCC	2 cut(s)	1232, 1550
PspPPI	RGGWCCY	2 cut(s)	1232, 1550
PstNI	CAGNNNCTG	1 cut(s)	566
PsuI	RGATCY	1 cut(s)	1259
PvuII	CAGCTG	1 cut(s)	1256
RsaI	GTAC	5 cut(s)	836, 990, 1206, 1221, 1269
RsaNI	GTAC	5 cut(s)	835, 989, 1205, 1220, 1268
RseI	CAYNNNNRTG	1 cut(s)	1437
SacI	GAGCTC	1 cut(s)	396
SaqAI	TTAA	4 cut(s)	98, 491, 785, 1344
SatI	GCNGC	5 cut(s)	324, 470, 500, 537, 725
Sau3AI	GATC	9 cut(s)	960, 1034, 1086, 1123, 1134, 1176, 1259, 1296, 1429
Sau96I	GGNCC	2 cut(s)	1232, 1550
SchI	GAGTC	5 cut(s)	13, 144, 642, 719, 1307
ScrFI	CCNGG	1 cut(s)	481
SduI	GDGCHC	3 cut(s)	28, 396, 800
SfaNI	GCATC	7 cut(s)	548, 736, 856, 1141, 1429, 1463, 1550
SfcI	CTRYAG	1 cut(s)	1251
SfuI	TTCGAA	1 cut(s)	1362
SinI	GGWCC	2 cut(s)	1232, 1550
SmiMI	CAYNNNNRTG	1 cut(s)	1437
SmlI	CTYRAG	1 cut(s)	368
SmoI	CTYRAG	1 cut(s)	368
SseBI	AGGCCT	1 cut(s)	929
SsiI	CCGC	1 cut(s)	1563
SspI	AATATT	1 cut(s)	752
SspMI	CTAG	5 cut(s)	116, 246, 303, 578, 1572
SstI	GAGCTC	1 cut(s)	396
StuI	AGGCCT	1 cut(s)	929
StyD4I	CCNGG	1 cut(s)	479
StyI	CCWWGG	1 cut(s)	930
TaaI	ACNGT	6 cut(s)	122, 266, 284, 351, 450, 586
TaiI	ACGT	1 cut(s)	387
TaqI	TCGA	7 cut(s)	105, 110, 1013, 1089, 1137, 1149, 1362
TaqII	GACCGA	1 cut(s)	438
TatI	WGTACW	2 cut(s)	1219, 1267
TfiI	GAWTC	4 cut(s)	107, 172, 665, 1015
Tru1I	TTAA	4 cut(s)	98, 491, 785, 1344
Tru9I	TTAA	4 cut(s)	98, 491, 785, 1344
TscAI	CASTG	4 cut(s)	800, 1270, 1410, 1422
TseFI	GTSAC	1 cut(s)	1526
TseI	GCWGC	5 cut(s)	323, 469, 499, 536, 724
Tsp45I	GTSAC	1 cut(s)	1526
TspDTI	ATGAA	8 cut(s)	311, 745, 877, 1014, 1187, 1230, 1233, 1491
TspGWI	ACGGA	1 cut(s)	1522
TspRI	CASTG	4 cut(s)	800, 1270, 1410, 1422
Van91I	CCANNNNNTGG	1 cut(s)	163
VpaK11BI	GGWCC	2 cut(s)	1232, 1550
XagI	CCTNNNNNAGG	1 cut(s)	576
XapI	RAATTY	1 cut(s)	456
XceI	RCATGY	2 cut(s)	873, 1493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	853
XspI	CTAG	5 cut(s)	116, 246, 303, 578, 1572
Zsp2I	ATGCAT	4 cut(s)	871, 1444, 1456, 1491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.