Prupe.5G127900_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000408
Physical Location & Seq
Forward (+)
12465708 .. 12469414
3707 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G127900.1

Sequence Viewer

Length: 2397 bp
ATGGCACTGGCTTTGGTTGGAGGGGCTGCCATAGGAGCACTCTTTGGAGCGCTGTATGATGTCGTTAAGGAATCGATGGGCAGGACTGTTTTGCAGTATAAACCCCTCCTTGGAGATCTTAAATTCACTCTAGAATCTCTACGGCCGCGCATCGTCCAACAGATAGGAGATCATAATGTGGAGTTAGGCCTCCCGAACGACGATATCGAGAGCCTACAAAGACAAATGGAGGAGGGCATAGTGCTTGTTAGGAAGCTGTCAAATATTGGTATGTGGAATTGTTATGCATGGGGCAGCTGCTGCAACTGCACAAAGCCTAGTTACAGCGACCAACTTGTTGACTTGGATAGGTCTCTTAGAATACTGTTAGAGATATTGAAGCTGCAGGAAGCAAGGGATGTGAAGGAGGTCTTGCTTTTGGCTAGGAAGATCCATGACAAACAAGATGAATTGGAAAGAAGAATGTCAGATTTGCTGAAAGTCCAGCAGGAAGCAGGGGATGTGGGAGGGTCTTCAGGAAGCAACACAGGCACGACGATACAGCAAGGAAACGAAGGGAATGGAGGGCATCAAGTGGCGCCATTAGGCGGAGTAGGAGGGGCTGCTACTCTAGGAGCAGTGTTTGGAGTGTTGTTTGATACCGTTGCGCGAGTGAAGGACAAGACTATGATGCTTAAACGCCCTCTCGAAGATGTCAAATCCACGCTAGACTCGTTAAAACCACTAATAGAAGAAATAGCAGCGTATAACAAGGTATTGAATCTCCCAAAGGAGGAATTAGAAAAGGTTAGCTTTCAAATGGAAGAGGGTGTGGAGCTACTTCACAAGTGCTCCAAGGTTCGTCAGTGGACTAGCTGCAAAAGGTATGAATATGCAAACAAACTTCTTGGATTGGACGAATCACTTCAACGATTGTTAAATATATTGAGAGTGCAATTAGCAAGGGATGTGAGGGAGAGCTTGGTTTCCGTAAGTAAAATAGAGAAGGTGATTGATCAAATTGAAGAGAGTGGTACGGTACAATTACAGAATCATCCAACTGAAATTGAAGATTCATGTGATGTACTTGAACACCCACAGCCTGAAGTTGGATTGAGTGTGCAGGGAACAAGGGATGTGAATGAGACATTGGATTCGGCAGCAAAAATAGAGGTCGGTGTGAAGCGAATCGAAGGTAGTGGAGATGTACAAGGTCAAACTGACATGGGAATAGGTGAACCTAAGTTGCCTACACTTGAAGCTCCGGATGCTGAAAATGAGGTGACTGAATATGTACCTTCAATGGTTACAATTGGCTTGGATGTGCTCTTGAGGGAGTTGAAGAGGGAGCTTCTTAAGGATGAGGTGTCAGCGCTTGTGCTAACCGGGCCTCGGGGATGCGGCAAAACCAAATTGGCAAACAAAATTTGTCAAGATAAGGAAGTTACAGATATATTCAAGAACAATATCTTCTTTGTTCGTGTTTCGAAAAGGCCCAACTTGAGAGTTATTGTACGAAAGCTATATCAACAGATTAAACACAAGGGTTCTCAGATACCTGAGTTGCAAGAGGACACAATTGCACTAAAGTGGCTGCAAGTATTTCTTAAGGAAACAGGACAGCACCCTTCACTGTTGGTCCTGGATGATGTTTGGCCTGGATCAGAACCCATTCTTGACAAGTTTGATAATTTCAAAACATCAAATTACAAGATTCTAGTGACATCAAGATCTGAATTTCCGACATTTGGTTCTCCATATTATTTGCAATCAATTTATGATGAAGGCACCATGACTCTTTCTCATCATTCCCGCGCATACTCCTTTGAATCGTTGGACGATGAAGACTTGGTATCTGTTTCTCCCGCACCTTCCTTCACAGCAATGGATGACGATCCAACTGCTTACTTTCGTGATTTCTCCACATCCTACCTGGAAGACAAAATCTCTCATGTTTCAGAAGATGCTTACCCTATGGCTCATTTTCATGATTCCTCTGCATCCACCGCAAGAGATAGAAGCTCTTATGTTTCAAGGGATGTTGGGACAAAGTTTCCTCTTGGCAATCCTGTCAAGTCTACACAGACATATATGCAGCAGAAGTTGGAACTGAAGGTGAGTGCTGATGACAAAACAATGAAGAAAGTCATGAAAGCTGTCTGTGCCATAAAGGGGGTTAGTTCGACCAGTTGGGATGCGAAGAACCAAAAGCTAACAGTGGTAGGACAGTTGGATCCAGCGCTAATAGCGACTAAGTTGAGGAAGATAGTTTCTAAAACAGAGGTGATATCAGTTGGCCCAGCCGAGGAAGAAATAAAAGAAGATAAGAAAGAGAGAAATCTTACTATGAAAGAGAAAATGGAAGACAACAAAGAAGAAAATAAAGAGAAAATTTTTACTAGGAAAGAGAGAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

799

Amino Acids

89.23

Weight (kDa)

5.55

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 577, 1766
AccI GTMKAC 1 cut(s) 2057
AccII CGCG 3 cut(s) 148, 649, 1794
AccIII TCCGGA 1 cut(s) 1243
AciI CCGC 6 cut(s) 146, 588, 1380, 1792, 1845, 1986
AclWI GGATC 5 cut(s) 424, 1648, 1868, 2207, 2220
AcoI YGGCCR 1 cut(s) 143
AcsI RAATTY 4 cut(s) 122, 1404, 1715, 2370
AcuI CTGAAG 3 cut(s) 498, 1104, 2111
AcyI GRCGYC 1 cut(s) 578
AfaI GTAC 6 cut(s) 1015, 1020, 1065, 1188, 1275, 1494
AfeI AGCGCT 3 cut(s) 51, 1353, 2220
AfiI CCNNNNNNNGG 8 cut(s) 110, 587, 772, 1088, 1371, 1727, 2151, 2284
AflII CTTAAG 2 cut(s) 1334, 1586
AjnI CCWGG 3 cut(s) 1620, 1636, 1911
AjuI GAANNNNNNNTTGG 2 cut(s) 1112, 1144
AleI CACNNNNGTG 1 cut(s) 1567
Alw21I GWGCWC 3 cut(s) 40, 833, 1308
Alw26I GTCTC 2 cut(s) 357, 1118
AlwI GGATC 5 cut(s) 424, 1648, 1868, 2207, 2220
AlwNI CAGNNNCTG 1 cut(s) 300
Ama87I CYCGRG 1 cut(s) 1371
Aor13HI TCCGGA 1 cut(s) 1243
Aor51HI AGCGCT 3 cut(s) 51, 1353, 2220
AoxI GGCC 6 cut(s) 143, 187, 1367, 1472, 1634, 2275
ApoI RAATTY 4 cut(s) 122, 1404, 1715, 2370
ArsI GACNNNNNNTTYG 2 cut(s) 1117, 1149
Asp700I GAANNNNTTC 2 cut(s) 903, 1650
AspLEI GCGC 7 cut(s) 52, 150, 580, 649, 1354, 1796, 2221
AspS9I GGNCC 4 cut(s) 1367, 1473, 1618, 2276
AsuC2I CCSGG 1 cut(s) 1366
AsuHPI GGTGA 5 cut(s) 1000, 1226, 1273, 2107, 2275
AsuII TTCGAA 1 cut(s) 1466
AvaI CYCGRG 1 cut(s) 1371
AvaII GGWCC 1 cut(s) 1618
BaeI ACNNNNGTAYC 2 cut(s) 1526, 1559
BamHI GGATCC 1 cut(s) 2212
BanI GGYRCC 2 cut(s) 577, 1766
BbsI GAAGAC 4 cut(s) 504, 1830, 1923, 2349
Bbv12I GWGCWC 3 cut(s) 40, 833, 1308
BccI CCATC 1 cut(s) 70
BceAI ACGGC 1 cut(s) 158
BcgI CGANNNNNNTGC 2 cut(s) 1862, 1896
BciT130I CCWGG 3 cut(s) 1622, 1638, 1913
BclI TGATCA 1 cut(s) 994
BcnI CCSGG 1 cut(s) 1366
BcoDI GTCTC 2 cut(s) 357, 1118
BfaI CTAG 8 cut(s) 131, 318, 423, 611, 707, 852, 1697, 2379
BfmI CTRYAG 1 cut(s) 383
BfoI RGCGCY 4 cut(s) 53, 581, 1355, 2222
BfrI CTTAAG 2 cut(s) 1334, 1586
BglII AGATCT 2 cut(s) 115, 1709
Bme1390I CCNGG 4 cut(s) 1366, 1622, 1638, 1913
Bme18I GGWCC 1 cut(s) 1618
BmeT110I CYCGRG 1 cut(s) 1371
BmgT120I GGNCC 4 cut(s) 1367, 1473, 1618, 2276
BmiI GGNNCC 3 cut(s) 579, 1768, 2214
BmrFI CCNGG 4 cut(s) 1366, 1622, 1638, 1913
BmsI GCATC 8 cut(s) 159, 577, 660, 1237, 1367, 1933, 1988, 2164
BpiI GAAGAC 4 cut(s) 504, 1830, 1923, 2349
Bpu14I TTCGAA 1 cut(s) 1466
BpuEI CTTGAG 2 cut(s) 1330, 1501
BpuMI CCSGG 1 cut(s) 1366
Bsa29I ATCGAT 1 cut(s) 74
BsaBI GATNNNNATC 1 cut(s) 1872
BsaHI GRCGYC 1 cut(s) 578
BsaI GGTCTC 1 cut(s) 357
BsaJI CCNNGG 4 cut(s) 109, 834, 1370, 2283
BsaWI WCCGGW 1 cut(s) 1243
BsaXI ACNNNNNCTCC 2 cut(s) 815, 845
Bsc4I CCNNNNNNNGG 8 cut(s) 110, 587, 772, 1088, 1371, 1727, 2151, 2284
Bse1I ACTGG 2 cut(s) 12, 2166
Bse3DI GCAATG 1 cut(s) 1869
Bse8I GATNNNNATC 1 cut(s) 1872
BseAI TCCGGA 1 cut(s) 1243
BseBI CCWGG 3 cut(s) 1622, 1638, 1913
BseCI ATCGAT 1 cut(s) 74
BseDI CCNNGG 4 cut(s) 109, 834, 1370, 2283
BseJI GATNNNNATC 1 cut(s) 1872
BseLI CCNNNNNNNGG 8 cut(s) 110, 587, 772, 1088, 1371, 1727, 2151, 2284
BseMI GCAATG 1 cut(s) 1869
BseMII CTCAG 2 cut(s) 1530, 1544
BseNI ACTGG 2 cut(s) 12, 2166
BseRI GAGGAG 1 cut(s) 245
BseX3I CGGCCG 1 cut(s) 143
BseYI CCCAGC 1 cut(s) 2278
BsgI GTGCAG 2 cut(s) 292, 1121
Bsh1236I CGCG 3 cut(s) 148, 649, 1794
Bsh1285I CGRYCG 1 cut(s) 146
BshFI GGCC 6 cut(s) 145, 189, 1369, 1474, 1636, 2277
BshNI GGYRCC 2 cut(s) 577, 1766
BshVI ATCGAT 1 cut(s) 74
BsiEI CGRYCG 1 cut(s) 146
BsiHKAI GWGCWC 3 cut(s) 40, 833, 1308
BsiHKCI CYCGRG 1 cut(s) 1371
BsiSI CCGG 2 cut(s) 1244, 1365
BslFI GGGAC 1 cut(s) 2038
BslI CCNNNNNNNGG 8 cut(s) 110, 587, 772, 1088, 1371, 1727, 2151, 2284
BsmAI GTCTC 2 cut(s) 357, 1118
BsmFI GGGAC 1 cut(s) 2038
BsnI GGCC 6 cut(s) 145, 189, 1369, 1474, 1636, 2277
Bso31I GGTCTC 1 cut(s) 357
BsoBI CYCGRG 1 cut(s) 1371
Bsp119I TTCGAA 1 cut(s) 1466
Bsp1286I GDGCHC 3 cut(s) 40, 833, 1308
Bsp13I TCCGGA 1 cut(s) 1243
Bsp1407I TGTACA 1 cut(s) 1186
Bsp143I GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
BspACI CCGC 6 cut(s) 146, 588, 1380, 1792, 1845, 1986
BspANI GGCC 6 cut(s) 145, 189, 1369, 1474, 1636, 2277
BspCNI CTCAG 2 cut(s) 1531, 1543
BspDI ATCGAT 1 cut(s) 74
BspEI TCCGGA 1 cut(s) 1243
BspFNI CGCG 3 cut(s) 148, 649, 1794
BspHI TCATGA 2 cut(s) 1966, 2127
BspLI GGNNCC 3 cut(s) 579, 1768, 2214
BspMAI CTGCAG 1 cut(s) 387
BspPI GGATC 5 cut(s) 424, 1648, 1868, 2207, 2220
BspT104I TTCGAA 1 cut(s) 1466
BspT107I GGYRCC 2 cut(s) 577, 1766
BspTI CTTAAG 2 cut(s) 1334, 1586
BspTNI GGTCTC 1 cut(s) 357
BsrDI GCAATG 1 cut(s) 1869
BsrGI TGTACA 1 cut(s) 1186
BsrI ACTGG 2 cut(s) 12, 2166
BssECI CCNNGG 4 cut(s) 109, 834, 1370, 2283
BssMI GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
BssNI GRCGYC 1 cut(s) 578
BssT1I CCWWGG 2 cut(s) 109, 834
Bst2UI CCWGG 3 cut(s) 1622, 1638, 1913
Bst4CI ACNGT 7 cut(s) 88, 366, 643, 1018, 1614, 2197, 2208
Bst6I CTCTTC 3 cut(s) 798, 999, 1316
BstACI GRCGYC 1 cut(s) 578
BstAFI CTTAAG 2 cut(s) 1334, 1586
BstAPI GCANNNNNTGC 1 cut(s) 300
BstAUI TGTACA 1 cut(s) 1186
BstBI TTCGAA 1 cut(s) 1466
BstDEI CTNAG 5 cut(s) 356, 1221, 1530, 1539, 2232
BstFNI CGCG 3 cut(s) 148, 649, 1794
BstH2I RGCGCY 4 cut(s) 53, 581, 1355, 2222
BstHHI GCGC 7 cut(s) 52, 150, 580, 649, 1354, 1796, 2221
BstKTI GATC 8 cut(s) 118, 172, 432, 997, 1643, 1712, 1876, 2215
BstMAI GTCTC 2 cut(s) 357, 1118
BstMBI GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
BstMCI CGRYCG 1 cut(s) 146
BstMWI GCNNNNNNNGC 9 cut(s) 35, 300, 306, 528, 1247, 1366, 1985, 2141, 2225
BstNI CCWGG 3 cut(s) 1622, 1638, 1913
BstSCI CCNGG 4 cut(s) 1364, 1620, 1636, 1911
BstSFI CTRYAG 1 cut(s) 383
BstUI CGCG 3 cut(s) 148, 649, 1794
BstV2I GAAGAC 4 cut(s) 504, 1830, 1923, 2349
BstX2I RGATCY 4 cut(s) 115, 429, 1709, 2212
BstYI RGATCY 4 cut(s) 115, 429, 1709, 2212
BstZI CGGCCG 1 cut(s) 143
Bsu15I ATCGAT 1 cut(s) 74
BsuRI GGCC 6 cut(s) 145, 189, 1369, 1474, 1636, 2277
BsuTUI ATCGAT 1 cut(s) 74
BtsI GCAGTG 1 cut(s) 624
BtsIMutI CAGTG 5 cut(s) 5, 624, 851, 1610, 2202
CaiI CAGNNNCTG 1 cut(s) 300
CciI TCATGA 2 cut(s) 1966, 2127
CfoI GCGC 7 cut(s) 52, 150, 580, 649, 1354, 1796, 2221
Cfr13I GGNCC 4 cut(s) 1367, 1473, 1618, 2276
ClaI ATCGAT 1 cut(s) 74
Csp6I GTAC 6 cut(s) 1014, 1019, 1064, 1187, 1274, 1493
CviAII CATG 8 cut(s) 288, 434, 1056, 1204, 1771, 1931, 1967, 2128
CviQI GTAC 6 cut(s) 1014, 1019, 1064, 1187, 1274, 1493
DdeI CTNAG 5 cut(s) 356, 1221, 1530, 1539, 2232
DinI GGCGCC 1 cut(s) 579
DpnI GATC 8 cut(s) 117, 171, 431, 996, 1642, 1711, 1875, 2214
DpnII GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
EaeI YGGCCR 1 cut(s) 143
EagI CGGCCG 1 cut(s) 143
Eam1104I CTCTTC 3 cut(s) 798, 999, 1316
EarI CTCTTC 3 cut(s) 798, 999, 1316
EciI GGCGGA 1 cut(s) 603
EclXI CGGCCG 1 cut(s) 143
Eco130I CCWWGG 2 cut(s) 109, 834
Eco147I AGGCCT 1 cut(s) 189
Eco31I GGTCTC 1 cut(s) 357
Eco32I GATATC 2 cut(s) 205, 2268
Eco47I GGWCC 1 cut(s) 1618
Eco47III AGCGCT 3 cut(s) 51, 1353, 2220
Eco52I CGGCCG 1 cut(s) 143
Eco57I CTGAAG 3 cut(s) 498, 1104, 2111
Eco88I CYCGRG 1 cut(s) 1371
EcoRII CCWGG 3 cut(s) 1620, 1636, 1911
EcoRV GATATC 2 cut(s) 205, 2268
EcoT14I CCWWGG 2 cut(s) 109, 834
EcoT22I ATGCAT 1 cut(s) 289
EgeI GGCGCC 1 cut(s) 579
EheI GGCGCC 1 cut(s) 579
ErhI CCWWGG 2 cut(s) 109, 834
FaeI CATG 8 cut(s) 291, 437, 1059, 1207, 1774, 1934, 1970, 2131
FalI AAGNNNNNCTT 6 cut(s) 395, 427, 776, 808, 1569, 1601
FaqI GGGAC 1 cut(s) 2038
FatI CATG 8 cut(s) 287, 433, 1055, 1203, 1770, 1930, 1966, 2127
FauI CCCGC 2 cut(s) 1799, 1852
FbaI TGATCA 1 cut(s) 994
FblI GTMKAC 1 cut(s) 2057
FspBI CTAG 8 cut(s) 131, 318, 423, 611, 707, 852, 1697, 2379
GlaI GCGC 7 cut(s) 51, 149, 579, 648, 1353, 1795, 2220
GsaI CCCAGC 1 cut(s) 2282
HaeII RGCGCY 4 cut(s) 53, 581, 1355, 2222
HaeIII GGCC 6 cut(s) 145, 189, 1369, 1474, 1636, 2277
HapII CCGG 2 cut(s) 1244, 1365
HhaI GCGC 7 cut(s) 52, 150, 580, 649, 1354, 1796, 2221
Hin1I GRCGYC 1 cut(s) 578
Hin1II CATG 8 cut(s) 291, 437, 1059, 1207, 1774, 1934, 1970, 2131
Hin6I GCGC 7 cut(s) 50, 148, 578, 647, 1352, 1794, 2219
HinP1I GCGC 7 cut(s) 50, 148, 578, 647, 1352, 1794, 2219
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HpaII CCGG 2 cut(s) 1244, 1365
HphI GGTGA 5 cut(s) 1000, 1226, 1273, 2107, 2275
Hpy166II GTNNAC 4 cut(s) 340, 849, 1217, 2058
Hpy188I TCNGA 6 cut(s) 469, 1533, 1645, 1714, 1722, 1939
Hpy8I GTNNAC 4 cut(s) 340, 849, 1217, 2058
Hpy99I CGWCG 2 cut(s) 203, 538
HpyCH4III ACNGT 7 cut(s) 88, 366, 643, 1018, 1614, 2197, 2208
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 300, 306, 528, 1247, 1366, 1985, 2141, 2225
HpyF3I CTNAG 5 cut(s) 356, 1221, 1530, 1539, 2232
Hsp92I GRCGYC 1 cut(s) 578
Hsp92II CATG 8 cut(s) 291, 437, 1059, 1207, 1774, 1934, 1970, 2131
HspAI GCGC 7 cut(s) 50, 148, 578, 647, 1352, 1794, 2219
KasI GGCGCC 1 cut(s) 577
Kpn2I TCCGGA 1 cut(s) 1243
Ksp22I TGATCA 1 cut(s) 994
Kzo9I GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
LmnI GCTCC 7 cut(s) 35, 47, 614, 814, 836, 1246, 1327
LweI GCATC 8 cut(s) 159, 577, 660, 1237, 1367, 1933, 1988, 2164
MaeI CTAG 8 cut(s) 131, 318, 423, 611, 707, 852, 1697, 2379
MaeIII GTNAC 5 cut(s) 320, 1261, 1285, 1423, 1699
MalI GATC 8 cut(s) 117, 171, 431, 996, 1642, 1711, 1875, 2214
MboI GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
MfeI CAATTG 2 cut(s) 1290, 1557
MflI RGATCY 4 cut(s) 115, 429, 1709, 2212
MhlI GDGCHC 3 cut(s) 40, 833, 1308
Mly113I GGCGCC 1 cut(s) 578
MlyI GAGTC 2 cut(s) 704, 1768
MmeI TCCRAC 8 cut(s) 181, 1061, 1069, 1745, 1794, 1901, 2064, 2190
Mph1103I ATGCAT 1 cut(s) 289
MroI TCCGGA 1 cut(s) 1243
MroXI GAANNNNTTC 2 cut(s) 903, 1650
MseI TTAA 8 cut(s) 66, 120, 675, 716, 917, 1335, 1515, 1587
MslI CAYNNNNRTG 3 cut(s) 1567, 1862, 1965
MspA1I CMGCKG 1 cut(s) 297
MspCI CTTAAG 2 cut(s) 1334, 1586
MspI CCGG 2 cut(s) 1244, 1365
MspR9I CCNGG 4 cut(s) 1366, 1622, 1638, 1913
MunI CAATTG 2 cut(s) 1290, 1557
MvaI CCWGG 3 cut(s) 1622, 1638, 1913
MvnI CGCG 3 cut(s) 148, 649, 1794
MwoI GCNNNNNNNGC 9 cut(s) 35, 300, 306, 528, 1247, 1366, 1985, 2141, 2225
NarI GGCGCC 1 cut(s) 578
NciI CCSGG 1 cut(s) 1366
NdeII GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
NlaIII CATG 8 cut(s) 291, 437, 1059, 1207, 1774, 1934, 1970, 2131
NlaIV GGNNCC 3 cut(s) 579, 1768, 2214
NmeAIII GCCGAG 1 cut(s) 2308
NmuCI GTSAC 2 cut(s) 1261, 1699
NsiI ATGCAT 1 cut(s) 289
NspV TTCGAA 1 cut(s) 1466
OliI CACNNNNGTG 1 cut(s) 1567
PagI TCATGA 2 cut(s) 1966, 2127
PceI AGGCCT 1 cut(s) 189
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 710
PdmI GAANNNNTTC 2 cut(s) 903, 1650
PfoI TCCNGGA 1 cut(s) 1620
PleI GAGTC 2 cut(s) 704, 1768
PluTI GGCGCC 1 cut(s) 581
PpsI GAGTC 2 cut(s) 704, 1768
Psp6I CCWGG 3 cut(s) 1620, 1636, 1911
PspFI CCCAGC 1 cut(s) 2278
PspGI CCWGG 3 cut(s) 1620, 1636, 1911
PspN4I GGNNCC 3 cut(s) 579, 1768, 2214
PspPI GGNCC 4 cut(s) 1367, 1473, 1618, 2276
PstI CTGCAG 1 cut(s) 387
PstNI CAGNNNCTG 1 cut(s) 300
PsuI RGATCY 4 cut(s) 115, 429, 1709, 2212
PvuII CAGCTG 1 cut(s) 297
RsaI GTAC 6 cut(s) 1015, 1020, 1065, 1188, 1275, 1494
RsaNI GTAC 6 cut(s) 1014, 1019, 1064, 1187, 1274, 1493
RseI CAYNNNNRTG 3 cut(s) 1567, 1862, 1965
SaqAI TTAA 8 cut(s) 66, 120, 675, 716, 917, 1335, 1515, 1587
Sau3AI GATC 8 cut(s) 115, 169, 429, 994, 1640, 1709, 1873, 2212
Sau96I GGNCC 4 cut(s) 1367, 1473, 1618, 2276
SchI GAGTC 2 cut(s) 704, 1768
ScrFI CCNGG 4 cut(s) 1366, 1622, 1638, 1913
SduI GDGCHC 3 cut(s) 40, 833, 1308
SfaNI GCATC 8 cut(s) 159, 577, 660, 1237, 1367, 1933, 1988, 2164
SfcI CTRYAG 1 cut(s) 383
SfoI GGCGCC 1 cut(s) 579
SfuI TTCGAA 1 cut(s) 1466
SinI GGWCC 1 cut(s) 1618
SmiMI CAYNNNNRTG 3 cut(s) 1567, 1862, 1965
SmlI CTYRAG 4 cut(s) 1309, 1334, 1480, 1586
SmoI CTYRAG 4 cut(s) 1309, 1334, 1480, 1586
SseBI AGGCCT 1 cut(s) 189
SsiI CCGC 6 cut(s) 146, 588, 1380, 1792, 1845, 1986
SspDI GGCGCC 1 cut(s) 577
SspI AATATT 1 cut(s) 265
SspMI CTAG 8 cut(s) 131, 318, 423, 611, 707, 852, 1697, 2379
StuI AGGCCT 1 cut(s) 189
StyD4I CCNGG 4 cut(s) 1364, 1620, 1636, 1911
StyI CCWWGG 2 cut(s) 109, 834
TaaI ACNGT 7 cut(s) 88, 366, 643, 1018, 1614, 2197, 2208
TaqI TCGA 6 cut(s) 74, 207, 687, 1170, 1466, 2162
TatI WGTACW 2 cut(s) 1063, 1186
TauI GCSGC 2 cut(s) 148, 1383
Tru1I TTAA 8 cut(s) 66, 120, 675, 716, 917, 1335, 1515, 1587
Tru9I TTAA 8 cut(s) 66, 120, 675, 716, 917, 1335, 1515, 1587
TscAI CASTG 5 cut(s) 12, 624, 851, 1617, 2202
TseFI GTSAC 2 cut(s) 1261, 1699
Tsp45I GTSAC 2 cut(s) 1261, 1699
TspDTI ATGAA 9 cut(s) 462, 882, 1044, 1776, 1836, 1955, 2132, 2144, 2342
TspGWI ACGGA 1 cut(s) 958
TspRI CASTG 5 cut(s) 12, 624, 851, 1617, 2202
Vha464I CTTAAG 2 cut(s) 1334, 1586
VpaK11BI GGWCC 1 cut(s) 1618
XapI RAATTY 4 cut(s) 122, 1404, 1715, 2370
XbaI TCTAGA 1 cut(s) 130
XcmI CCANNNNNNNNNTGG 1 cut(s) 1909
XmiI GTMKAC 1 cut(s) 2057
XmnI GAANNNNTTC 2 cut(s) 903, 1650
XspI CTAG 8 cut(s) 131, 318, 423, 611, 707, 852, 1697, 2379
Zsp2I ATGCAT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.