zinc finger CCCH domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1191 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 700 |
| AatII | GACGTC | 1 cut(s) | 653 |
| Acc65I | GGTACC | 2 cut(s) | 391, 516 |
| AccB1I | GGYRCC | 2 cut(s) | 391, 516 |
| AccIII | TCCGGA | 1 cut(s) | 820 |
| AciI | CCGC | 3 cut(s) | 138, 188, 1242 |
| AclI | AACGTT | 1 cut(s) | 924 |
| AclWI | GGATC | 3 cut(s) | 105, 830, 1160 |
| AcoI | YGGCCR | 1 cut(s) | 189 |
| AcsI | RAATTY | 5 cut(s) | 32, 269, 497, 801, 913 |
| AcuI | CTGAAG | 1 cut(s) | 882 |
| AcyI | GRCGYC | 1 cut(s) | 650 |
| AdeI | CACNNNGTG | 1 cut(s) | 710 |
| AfaI | GTAC | 4 cut(s) | 393, 504, 518, 1239 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 305, 513 |
| AflIII | ACRYGT | 1 cut(s) | 1184 |
| AgsI | TTSAA | 9 cut(s) | 8, 53, 664, 670, 794, 845, 1051, 1151, 1370 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 555 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 866, 898 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 423, 455 |
| AluBI | AGCT | 7 cut(s) | 11, 200, 324, 346, 781, 896, 1296 |
| AluI | AGCT | 7 cut(s) | 11, 200, 324, 346, 781, 896, 1296 |
| Alw21I | GWGCWC | 1 cut(s) | 326 |
| Alw26I | GTCTC | 2 cut(s) | 483, 563 |
| AlwI | GGATC | 3 cut(s) | 105, 830, 1160 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 20 |
| Ama87I | CYCGRG | 1 cut(s) | 528 |
| Aor13HI | TCCGGA | 1 cut(s) | 820 |
| AoxI | GGCC | 4 cut(s) | 189, 406, 449, 605 |
| ApeKI | GCWGC | 5 cut(s) | 417, 420, 735, 893, 1128 |
| ApoI | RAATTY | 5 cut(s) | 32, 269, 497, 801, 913 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 482, 514 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 642 |
| Asp718I | GGTACC | 2 cut(s) | 391, 516 |
| AspS9I | GGNCC | 4 cut(s) | 125, 261, 275, 407 |
| AsuHPI | GGTGA | 2 cut(s) | 696, 971 |
| AvaI | CYCGRG | 1 cut(s) | 528 |
| AvaII | GGWCC | 3 cut(s) | 125, 261, 275 |
| BanI | GGYRCC | 2 cut(s) | 391, 516 |
| BanII | GRGCYC | 1 cut(s) | 326 |
| BbsI | GAAGAC | 1 cut(s) | 569 |
| Bbv12I | GWGCWC | 1 cut(s) | 326 |
| BbvI | GCAGC | 5 cut(s) | 429, 432, 747, 905, 1115 |
| BccI | CCATC | 6 cut(s) | 300, 403, 531, 923, 1037, 1151 |
| BceAI | ACGGC | 1 cut(s) | 176 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1295, 1329, 1337, 1371 |
| BciVI | GTATCC | 2 cut(s) | 308, 724 |
| BcoDI | GTCTC | 2 cut(s) | 483, 563 |
| BfaI | CTAG | 2 cut(s) | 414, 453 |
| BfmI | CTRYAG | 2 cut(s) | 201, 1278 |
| BfuI | GTATCC | 2 cut(s) | 308, 724 |
| BisI | GCNGC | 6 cut(s) | 189, 418, 421, 736, 894, 1129 |
| BlpI | GCTNAGC | 1 cut(s) | 675 |
| BlsI | GCNGC | 6 cut(s) | 190, 419, 422, 737, 895, 1130 |
| Bme18I | GGWCC | 3 cut(s) | 125, 261, 275 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 555 |
| BmeT110I | CYCGRG | 1 cut(s) | 528 |
| BmgT120I | GGNCC | 4 cut(s) | 125, 261, 275, 407 |
| BmiI | GGNNCC | 3 cut(s) | 262, 393, 518 |
| BmrI | ACTGGG | 2 cut(s) | 267, 1127 |
| BmsI | GCATC | 2 cut(s) | 99, 125 |
| BmuI | ACTGGG | 2 cut(s) | 267, 1127 |
| BpiI | GAAGAC | 1 cut(s) | 569 |
| BpmI | CTGGAG | 2 cut(s) | 507, 674 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 675 |
| BpuEI | CTTGAG | 1 cut(s) | 340 |
| BsaAI | YACGTR | 1 cut(s) | 1185 |
| BsaHI | GRCGYC | 1 cut(s) | 650 |
| BsaJI | CCNNGG | 3 cut(s) | 545, 1097, 1216 |
| BsaWI | WCCGGW | 1 cut(s) | 820 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 305, 513 |
| Bse1I | ACTGG | 8 cut(s) | 14, 156, 262, 469, 490, 569, 750, 1133 |
| Bse3DI | GCAATG | 1 cut(s) | 745 |
| BseAI | TCCGGA | 1 cut(s) | 820 |
| BseDI | CCNNGG | 3 cut(s) | 545, 1097, 1216 |
| BseGI | GGATG | 5 cut(s) | 64, 140, 295, 523, 1045 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 305, 513 |
| BseMI | GCAATG | 1 cut(s) | 745 |
| BseMII | CTCAG | 4 cut(s) | 12, 470, 577, 689 |
| BseNI | ACTGG | 8 cut(s) | 14, 156, 262, 469, 490, 569, 750, 1133 |
| BseRI | GAGGAG | 1 cut(s) | 551 |
| BseX3I | CGGCCG | 1 cut(s) | 189 |
| BseXI | GCAGC | 5 cut(s) | 429, 432, 747, 905, 1115 |
| BseYI | CCCAGC | 1 cut(s) | 1230 |
| Bsh1285I | CGRYCG | 1 cut(s) | 192 |
| BshFI | GGCC | 4 cut(s) | 191, 408, 451, 607 |
| BshNI | GGYRCC | 2 cut(s) | 391, 516 |
| BsiEI | CGRYCG | 1 cut(s) | 192 |
| BsiHKAI | GWGCWC | 1 cut(s) | 326 |
| BsiHKCI | CYCGRG | 1 cut(s) | 528 |
| BsiSI | CCGG | 1 cut(s) | 821 |
| BslFI | GGGAC | 3 cut(s) | 221, 274, 916 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 305, 513 |
| BsmAI | GTCTC | 2 cut(s) | 483, 563 |
| BsmFI | GGGAC | 3 cut(s) | 221, 274, 916 |
| BsmI | GAATGC | 2 cut(s) | 470, 676 |
| BsnI | GGCC | 4 cut(s) | 191, 408, 451, 607 |
| BsoBI | CYCGRG | 1 cut(s) | 528 |
| Bsp1286I | GDGCHC | 1 cut(s) | 326 |
| Bsp13I | TCCGGA | 1 cut(s) | 820 |
| Bsp143I | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 675 |
| BspACI | CCGC | 3 cut(s) | 138, 188, 1242 |
| BspANI | GGCC | 4 cut(s) | 191, 408, 451, 607 |
| BspCNI | CTCAG | 4 cut(s) | 13, 471, 576, 688 |
| BspEI | TCCGGA | 1 cut(s) | 820 |
| BspLI | GGNNCC | 3 cut(s) | 262, 393, 518 |
| BspPI | GGATC | 3 cut(s) | 105, 830, 1160 |
| BspQI | GCTCTTC | 1 cut(s) | 331 |
| BspT107I | GGYRCC | 2 cut(s) | 391, 516 |
| BsrDI | GCAATG | 1 cut(s) | 745 |
| BsrI | ACTGG | 8 cut(s) | 14, 156, 262, 469, 490, 569, 750, 1133 |
| BssECI | CCNNGG | 3 cut(s) | 545, 1097, 1216 |
| BssMI | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| BssNI | GRCGYC | 1 cut(s) | 650 |
| BssT1I | CCWWGG | 3 cut(s) | 545, 1097, 1216 |
| Bst4CI | ACNGT | 1 cut(s) | 817 |
| Bst6I | CTCTTC | 3 cut(s) | 331, 1284, 1326 |
| BstACI | GRCGYC | 1 cut(s) | 650 |
| BstBAI | YACGTR | 1 cut(s) | 1185 |
| BstC8I | GCNNGC | 1 cut(s) | 1246 |
| BstDEI | CTNAG | 4 cut(s) | 21, 479, 563, 675 |
| BstF5I | GGATG | 5 cut(s) | 64, 140, 295, 523, 1045 |
| BstKTI | GATC | 9 cut(s) | 100, 175, 535, 838, 856, 1029, 1168, 1309, 1351 |
| BstMAI | GTCTC | 2 cut(s) | 483, 563 |
| BstMBI | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| BstMCI | CGRYCG | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 17, 197, 414, 591 |
| BstSFI | CTRYAG | 2 cut(s) | 201, 1278 |
| BstV1I | GCAGC | 5 cut(s) | 429, 432, 747, 905, 1115 |
| BstV2I | GAAGAC | 1 cut(s) | 569 |
| BstX2I | RGATCY | 1 cut(s) | 1165 |
| BstYI | RGATCY | 1 cut(s) | 1165 |
| BstZI | CGGCCG | 1 cut(s) | 189 |
| BsuI | GTATCC | 2 cut(s) | 308, 724 |
| BsuRI | GGCC | 4 cut(s) | 191, 408, 451, 607 |
| BtgZI | GCGATG | 1 cut(s) | 122 |
| BtsCI | GGATG | 5 cut(s) | 64, 140, 295, 523, 1045 |
| BtsIMutI | CAGTG | 3 cut(s) | 149, 813, 1140 |
| Cac8I | GCNNGC | 1 cut(s) | 1246 |
| CaiI | CAGNNNCTG | 1 cut(s) | 20 |
| Cfr13I | GGNCC | 4 cut(s) | 125, 261, 275, 407 |
| Csp6I | GTAC | 4 cut(s) | 392, 503, 517, 1238 |
| CviAII | CATG | 3 cut(s) | 362, 510, 833 |
| CviQI | GTAC | 4 cut(s) | 392, 503, 517, 1238 |
| DdeI | CTNAG | 4 cut(s) | 21, 479, 563, 675 |
| DpnI | GATC | 9 cut(s) | 99, 174, 534, 837, 855, 1028, 1167, 1308, 1350 |
| DpnII | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| DraI | TTTAAA | 1 cut(s) | 252 |
| DraIII | CACNNNGTG | 1 cut(s) | 710 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 700 |
| DriI | GACNNNNNGTC | 1 cut(s) | 555 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 700 |
| EaeI | YGGCCR | 1 cut(s) | 189 |
| EagI | CGGCCG | 1 cut(s) | 189 |
| Eam1104I | CTCTTC | 3 cut(s) | 331, 1284, 1326 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 555 |
| EarI | CTCTTC | 3 cut(s) | 331, 1284, 1326 |
| Ecl136II | GAGCTC | 1 cut(s) | 324 |
| EclXI | CGGCCG | 1 cut(s) | 189 |
| Eco130I | CCWWGG | 3 cut(s) | 545, 1097, 1216 |
| Eco147I | AGGCCT | 1 cut(s) | 451 |
| Eco24I | GRGCYC | 1 cut(s) | 326 |
| Eco47I | GGWCC | 3 cut(s) | 125, 261, 275 |
| Eco52I | CGGCCG | 1 cut(s) | 189 |
| Eco53kI | GAGCTC | 1 cut(s) | 324 |
| Eco57I | CTGAAG | 1 cut(s) | 882 |
| Eco88I | CYCGRG | 1 cut(s) | 528 |
| EcoICRI | GAGCTC | 1 cut(s) | 324 |
| EcoO109I | RGGNCCY | 1 cut(s) | 261 |
| EcoRI | GAATTC | 1 cut(s) | 913 |
| EcoT14I | CCWWGG | 3 cut(s) | 545, 1097, 1216 |
| EcoT38I | GRGCYC | 1 cut(s) | 326 |
| ErhI | CCWWGG | 3 cut(s) | 545, 1097, 1216 |
| FaeI | CATG | 3 cut(s) | 365, 513, 836 |
| FaqI | GGGAC | 3 cut(s) | 221, 274, 916 |
| FatI | CATG | 3 cut(s) | 361, 509, 832 |
| FauI | CCCGC | 2 cut(s) | 131, 1249 |
| FauNDI | CATATG | 1 cut(s) | 1120 |
| Fnu4HI | GCNGC | 6 cut(s) | 189, 418, 421, 736, 894, 1129 |
| FokI | GGATG | 5 cut(s) | 71, 147, 282, 510, 1052 |
| FriOI | GRGCYC | 1 cut(s) | 326 |
| Fsp4HI | GCNGC | 6 cut(s) | 189, 418, 421, 736, 894, 1129 |
| FspBI | CTAG | 2 cut(s) | 414, 453 |
| GluI | GCNGC | 6 cut(s) | 189, 418, 421, 736, 894, 1129 |
| GsaI | CCCAGC | 1 cut(s) | 1234 |
| GsuI | CTGGAG | 2 cut(s) | 507, 674 |
| HaeIII | GGCC | 4 cut(s) | 191, 408, 451, 607 |
| HapII | CCGG | 1 cut(s) | 821 |
| Hin1I | GRCGYC | 1 cut(s) | 650 |
| Hin1II | CATG | 3 cut(s) | 365, 513, 836 |
| HincII | GTYRAC | 1 cut(s) | 922 |
| HindII | GTYRAC | 1 cut(s) | 922 |
| HinfI | GANTC | 5 cut(s) | 23, 53, 790, 824, 1047 |
| HpaI | GTTAAC | 1 cut(s) | 922 |
| HpaII | CCGG | 1 cut(s) | 821 |
| HphI | GGTGA | 2 cut(s) | 696, 971 |
| Hpy166II | GTNNAC | 2 cut(s) | 874, 922 |
| Hpy188I | TCNGA | 7 cut(s) | 58, 300, 537, 648, 760, 912, 1024 |
| Hpy188III | TCNNGA | 6 cut(s) | 176, 530, 691, 821, 1030, 1328 |
| Hpy8I | GTNNAC | 2 cut(s) | 874, 922 |
| HpyAV | CCTTC | 6 cut(s) | 420, 448, 618, 695, 1118, 1279 |
| HpyCH4III | ACNGT | 1 cut(s) | 817 |
| HpyCH4IV | ACGT | 4 cut(s) | 650, 924, 1184, 1301 |
| HpyCH4V | TGCA | 7 cut(s) | 285, 542, 893, 1007, 1118, 1316, 1358 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 17, 197, 414, 591 |
| HpyF3I | CTNAG | 4 cut(s) | 21, 479, 563, 675 |
| HpySE526I | ACGT | 4 cut(s) | 650, 924, 1184, 1301 |
| Hsp92I | GRCGYC | 1 cut(s) | 650 |
| Hsp92II | CATG | 3 cut(s) | 365, 513, 836 |
| Kpn2I | TCCGGA | 1 cut(s) | 820 |
| KpnI | GGTACC | 2 cut(s) | 395, 520 |
| KspAI | GTTAAC | 1 cut(s) | 922 |
| Kzo9I | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| LguI | GCTCTTC | 1 cut(s) | 331 |
| LmnI | GCTCC | 1 cut(s) | 16 |
| Lsp1109I | GCAGC | 5 cut(s) | 429, 432, 747, 905, 1115 |
| LweI | GCATC | 2 cut(s) | 99, 125 |
| MaeI | CTAG | 2 cut(s) | 414, 453 |
| MaeII | ACGT | 4 cut(s) | 650, 924, 1184, 1301 |
| MaeIII | GTNAC | 3 cut(s) | 702, 811, 947 |
| MalI | GATC | 9 cut(s) | 99, 174, 534, 837, 855, 1028, 1167, 1308, 1350 |
| MboI | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| MflI | RGATCY | 1 cut(s) | 1165 |
| MhlI | GDGCHC | 1 cut(s) | 326 |
| MlyI | GAGTC | 2 cut(s) | 32, 833 |
| MroI | TCCGGA | 1 cut(s) | 820 |
| MroXI | GAANNNNTTC | 1 cut(s) | 642 |
| MseI | TTAA | 5 cut(s) | 77, 251, 369, 921, 993 |
| MspI | CCGG | 1 cut(s) | 821 |
| Mva1269I | GAATGC | 2 cut(s) | 470, 676 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 17, 197, 414, 591 |
| NdeI | CATATG | 1 cut(s) | 1120 |
| NdeII | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| NlaIII | CATG | 3 cut(s) | 365, 513, 836 |
| NlaIV | GGNNCC | 3 cut(s) | 262, 393, 518 |
| NmuCI | GTSAC | 2 cut(s) | 702, 811 |
| PaeR7I | CTCGAG | 1 cut(s) | 528 |
| PceI | AGGCCT | 1 cut(s) | 451 |
| PciSI | GCTCTTC | 1 cut(s) | 331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PctI | GAATGC | 2 cut(s) | 470, 676 |
| PdmI | GAANNNNTTC | 1 cut(s) | 642 |
| PfeI | GAWTC | 3 cut(s) | 53, 790, 1047 |
| PkrI | GCNGC | 6 cut(s) | 190, 419, 422, 737, 895, 1130 |
| PleI | GAGTC | 2 cut(s) | 31, 832 |
| PpsI | GAGTC | 2 cut(s) | 31, 832 |
| Ppu21I | YACGTR | 1 cut(s) | 1185 |
| PpuMI | RGGWCCY | 1 cut(s) | 261 |
| PsiI | TTATAA | 1 cut(s) | 1191 |
| Psp124BI | GAGCTC | 1 cut(s) | 326 |
| Psp1406I | AACGTT | 1 cut(s) | 924 |
| Psp5II | RGGWCCY | 1 cut(s) | 261 |
| PspFI | CCCAGC | 1 cut(s) | 1230 |
| PspN4I | GGNNCC | 3 cut(s) | 262, 393, 518 |
| PspPI | GGNCC | 4 cut(s) | 125, 261, 275, 407 |
| PspPPI | RGGWCCY | 1 cut(s) | 261 |
| PstNI | CAGNNNCTG | 1 cut(s) | 20 |
| PsuI | RGATCY | 1 cut(s) | 1165 |
| RsaI | GTAC | 4 cut(s) | 393, 504, 518, 1239 |
| RsaNI | GTAC | 4 cut(s) | 392, 503, 517, 1238 |
| SacI | GAGCTC | 1 cut(s) | 326 |
| SapI | GCTCTTC | 1 cut(s) | 331 |
| SaqAI | TTAA | 5 cut(s) | 77, 251, 369, 921, 993 |
| SatI | GCNGC | 6 cut(s) | 189, 418, 421, 736, 894, 1129 |
| Sau3AI | GATC | 9 cut(s) | 97, 172, 532, 835, 853, 1026, 1165, 1306, 1348 |
| Sau96I | GGNCC | 4 cut(s) | 125, 261, 275, 407 |
| SchI | GAGTC | 2 cut(s) | 32, 833 |
| SduI | GDGCHC | 1 cut(s) | 326 |
| SfaNI | GCATC | 2 cut(s) | 99, 125 |
| SfcI | CTRYAG | 2 cut(s) | 201, 1278 |
| Sfr274I | CTCGAG | 1 cut(s) | 528 |
| SinI | GGWCC | 3 cut(s) | 125, 261, 275 |
| SlaI | CTCGAG | 1 cut(s) | 528 |
| SmlI | CTYRAG | 2 cut(s) | 319, 528 |
| SmoI | CTYRAG | 2 cut(s) | 319, 528 |
| SseBI | AGGCCT | 1 cut(s) | 451 |
| SsiI | CCGC | 3 cut(s) | 138, 188, 1242 |
| SspMI | CTAG | 2 cut(s) | 414, 453 |
| SstI | GAGCTC | 1 cut(s) | 326 |
| StuI | AGGCCT | 1 cut(s) | 451 |
| StyI | CCWWGG | 3 cut(s) | 545, 1097, 1216 |
| TaaI | ACNGT | 1 cut(s) | 817 |
| TaiI | ACGT | 4 cut(s) | 653, 927, 1187, 1304 |
| TaqI | TCGA | 5 cut(s) | 529, 724, 1029, 1305, 1347 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 3 cut(s) | 53, 790, 1047 |
| Tru1I | TTAA | 5 cut(s) | 77, 251, 369, 921, 993 |
| Tru9I | TTAA | 5 cut(s) | 77, 251, 369, 921, 993 |
| TscAI | CASTG | 3 cut(s) | 156, 820, 1140 |
| TseFI | GTSAC | 2 cut(s) | 702, 811 |
| TseI | GCWGC | 5 cut(s) | 417, 420, 735, 893, 1128 |
| Tsp45I | GTSAC | 2 cut(s) | 702, 811 |
| TspDTI | ATGAA | 5 cut(s) | 444, 600, 881, 1137, 1190 |
| TspGWI | ACGGA | 1 cut(s) | 267 |
| TspRI | CASTG | 3 cut(s) | 156, 820, 1140 |
| VpaK11BI | GGWCC | 3 cut(s) | 125, 261, 275 |
| XapI | RAATTY | 5 cut(s) | 32, 269, 497, 801, 913 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1214 |
| XhoI | CTCGAG | 1 cut(s) | 528 |
| XmnI | GAANNNNTTC | 1 cut(s) | 642 |
| XspI | CTAG | 2 cut(s) | 414, 453 |
| ZraI | GACGTC | 1 cut(s) | 651 |