pycom06g10800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0000408
Physical Location & Seq
Forward (+)
16055525 .. 16060021
4497 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g10800.5

Sequence Viewer

Length: 3285 bp
ATGGCACTGTCCTTAGTTGGAGGGGCGGCCATAGGAGCGCTGTTCGGAGCGTTGTATGATGTCGTTAAGATATCGATAGGCAAGACAGCTATGCAGTACAAACCCCTCCTCAGAGATCTTAAATTCACACTAGACTCTCTAAGGCCGCGGATCATCCAACAGATAGGAGAACATAACGTGGAATTGGGTATTTCGAACGAAGATATAGAGAGCCTGCAAAGACAAATGGTGGAGGGTACAGAGCTCGTTAGGATGTTATCGAACCGTGGCACGTGGAGCTGCTACATCCTGTGCAGCTGCTGCAACTGCAATAAACCGAGTTATGCGGAACAACTTGTTGAATTGGATAGGTCTCTTAGAATATTGTTGGAGATACTGAAGCTGCAGGAAGCGCGGGATGTGAAGGAGGTCTTGCTTTTGGCTAGGAAGATCAACGACAAACAAGGTGAATTGGAAAGGAGACTGGCCGATTTGCTCAAAGGGCAGCAAGAGTCGGGGGACGGGGGAGAGTCTTCGGGAAGTGGTGCAGAGACAACACCGAATGAACAAAATGGAGAGAATGGTGGACAACAAGTGGCGCCGTCAGGTGGAGGAGTAGGGGCTGCTGCTCTAGGAGCGGCATTAGCAAGGGATGTGAGGGAGAGCTTGGTTTCCGTAAGCAATATAGAGGCGGTGATCAATCAAATTGAAGGGAGTGGTGTGGTAAAATTACAAAATGAGAAAAATGAAGCTAAAGGTTCATGTGAAGCGCCCGCAGCCATGGCTAAGAGTGCAGTTGGATTGAATGCACTTAGTGTGGAGGGAACAAGGGACGTGACCGAGACATTGGATCGATCAGCAGCGAATATAAAGGTAGCGTGGCAGAAAGTTGAAGAGAGTTGGGTGGCACAAAGTAAAACTGAACATCCATCACGTACAGTTGGACAGGATGCAATGAACATGCAGGTGGGAGCAAGGAGTATGGAGGAGATCTCTGTAAGTGATGTAGAGCTGGGGCTCAAGCGAATTCAGTGTAAAGAAGTATCCAAACTTGATGCGCCATTTAGGGTATTGGGGAAGGATGTTCTTAAGGATGAGGAAGATGAGGAACTTGATGAGCAAGTGGAAGATCATCATGACAGGAAGAAGAAAGGAGCTGAGACTGTGACAGGTGCAAGTGGAGACGGGATGGTGATTTGTAAAGCTGATGGGTGTGCAGTCGATCTGAGTGATGCAAAGGCGTATAATAGAAGGCATAGGGTGTGCGAACTTCATTCGAAGGCTCCACTTGTGATTGTGTCTGGTCTAAAGAGAAGATTTTGCCATAAATGCAATTTCATGATCTATCCAGAATTTGATGACACCAAACAAAGTTGTCGTAGGCATTTTCCCTACATTGAACACCATGGTACAGCCACTCAGTTAAAGGACTTAAGTGGTGATATAGATAGGGTGATCAGTCAAACTGAAAGGAGTGGTGCGGTACAATCACAAAACGACCAAAGTGAAATTAAAGGTTCATATGAAGTGGTGGAAGCCACACCACCAGCAGTTGGATTGAATGTACCGAGTGTGCAGGGAACAAGGTATTCAAAGGAAACATTGCAGACCTCAGTGTGCAGGGAACAAAGGATTCATACAGAGCCACGACTCAAGCAAATTCAGGGGAAAGACGTGTTTGATTCTGAACCTCCGTACGCTGAATACAAGGAAACTGAATACGTACCTCCATCGGTTACAATTGACATGGATGTGCTTTTGAGAGGATTGAAGAGGTTTCTTCTTAATGAAGAGGTGTCAGCGGTTGTGCTAACGGGTCCTGCGGGAAGCGGGAAAACCACATTAGCAAAATTCTTCTGTGAAGATGAGGAAGTCAAAAATATATTCAAGAACATCTTCTTTGTTCATGTTTCGGAAAATCCTAACTTGAGCCTTATGGTACAAACACTATATCAACAGACGGGTTTCCAGATACCTGCCTTGGAAGACGAATCAATTGCGCTTCACTGGTTGCACCGATTTCTCATGGAAACAGCAGTGCACCCATCAGTGTTGGTCTTGGATGATGTTTGCCCTGGATCAGAATCCCTTCTTGACAAGTTTGATGAATTCAAAACACCAAATTACAAGATTATGGTGACATCAAGGTATGAATTTCCGGCATTTGGTTTTCCATATTATCTGAAACCACTGAATGCTGAAGATGAGATGACCCTTTCTCATCATTCCCGCGCACACAACATCGAATTACTGGATGATGACGACCTGATATGTGTTTCTCCGCCGTCCATCACATTTGATGATGATGGCCCGATAACTCATTTTCCTGATTCCTCCGCGTCCTACTTGGGAGACGGAAGCTCTCATGTTTCAACAGCTATCAGGCCAATGGATCAATTTCATGATTCCTCCGCATCAACCTTGAGAGATAAAAGCTCGTATGTTCCAAAAGATGCAGGGACAATGTTTGAGCCCGACAACCCTGTCAAGTCGACGCAGACATATATGCAGCAGAAGTTGGAACTGAAGGTGAGTGCCAGTGACAAAGCAATGAAGAAAGTCATGAAAGCTGTCCACGCCATAAAGGGGGTTCATTCGACCAGTTGGGACGCGAAGAACCAGAGGCTAACAGTGACGGGGCAGTTGGATCCGGCGCTAATAGCTACTAGGTTGAGAAAGATCGCTGCGAAAACAGAGGTAATATCAGTTGGGCCAGCGAAGGAAGAGATCAAAGAAGACAAGAAAGAGAAATTTCTTACCAAGACCGAAGTAAAAGACGATAAGAAAGCGAGAAATCTCACTTTGAAAGAGAGAATGGAAGACAAGAACCAAGAAAAGAAAGAGCGAAGTCTTCCCTTGAAAGAGAGAATGGAATACAAGAAAAGAGACGAGGAGGAGATATTCATTACGCCCAGAATCTGGCACATTGCTGATTGTATAAATCGCCCAAAACAACCTGACTCTAGCACTACAAACATATTCTCTAACATTCCAGATCTTCAATTTGCCCGTCGGGGACAGGAGGCGCACGACAACCATGTCAAGAAGACAGCAGAGCTTGCCGAGAAACCAACCAAATCAGGTAACTTTGATCCCCGCCTCCAGGCGAAAGTACTGAAAGTCGTTGATGTTTCTTATGGAGGAGAGGATGGTTTCAATCAGGCTGTTAAGTACACTTTGAAGAGGTTAACCATGGGCATAGATGACACGCTAAAGGCTTTGGAGATGGGAGCGATTAACAGACTTATTGTGAGGGAAAATCTTGACACCAATAGGTATGTGTTAAAAGAACTCGAAGACCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

1095

Amino Acids

121.89

Weight (kDa)

5.69

Isoelectric Point (pI)

41.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 934
AasI GACNNNNNNGTC 2 cut(s) 2462, 3017
Acc36I ACCTGC 2 cut(s) 934, 1963
AccB1I GGYRCC 1 cut(s) 577
AccB7I CCANNNNNTGG 2 cut(s) 1532, 2898
AccBSI CCGCTC 1 cut(s) 617
AccI GTMKAC 1 cut(s) 2471
AccII CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
AclWI GGATC 7 cut(s) 158, 837, 2065, 2379, 2621, 2634, 3065
AcoI YGGCCR 2 cut(s) 27, 465
AcsI RAATTY 8 cut(s) 122, 1005, 1331, 1638, 1829, 2087, 2132, 2729
AcuI CTGAAG 3 cut(s) 398, 2199, 2525
AcvI CACGTG 1 cut(s) 273
AcyI GRCGYC 1 cut(s) 578
AdeI CACNNNGTG 1 cut(s) 794
AfeI AGCGCT 1 cut(s) 39
AfiI CCNNNNNNNGG 6 cut(s) 587, 1532, 2144, 2565, 2898, 3082
AflII CTTAAG 2 cut(s) 1067, 1411
AflIII ACRYGT 1 cut(s) 1653
AjiI CACGTC 2 cut(s) 814, 1654
AjnI CCWGG 2 cut(s) 2053, 3081
Alw21I GWGCWC 2 cut(s) 246, 2022
Alw26I GTCTC 8 cut(s) 357, 454, 524, 815, 1133, 1155, 2325, 2859
Alw44I GTGCAC 1 cut(s) 2018
AlwI GGATC 7 cut(s) 158, 837, 2065, 2379, 2621, 2634, 3065
AlwNI CAGNNNCTG 2 cut(s) 300, 2898
Aor51HI AGCGCT 1 cut(s) 39
AoxI GGCC 6 cut(s) 27, 143, 465, 2287, 2363, 2690
ApaLI GTGCAC 1 cut(s) 2018
ApoI RAATTY 8 cut(s) 122, 1005, 1331, 1638, 1829, 2087, 2132, 2729
Asp700I GAANNNNTTC 2 cut(s) 1874, 2067
AspLEI GCGC 9 cut(s) 40, 394, 580, 751, 1039, 1981, 2213, 2635, 3007
AspS9I GGNCC 3 cut(s) 1796, 2288, 2690
AsuHPI GGTGA 7 cut(s) 458, 685, 1183, 1430, 1444, 2128, 2521
AsuII TTCGAA 2 cut(s) 194, 1256
AvaII GGWCC 1 cut(s) 1796
BaeGI GKGCMC 1 cut(s) 2022
BamHI GGATCC 1 cut(s) 2626
BanI GGYRCC 1 cut(s) 577
BanII GRGCYC 3 cut(s) 246, 999, 2454
BbrPI CACGTG 1 cut(s) 273
BbsI GAAGAC 6 cut(s) 504, 1971, 2721, 2805, 2822, 3032
Bbv12I GWGCWC 2 cut(s) 246, 2022
BccI CCATC 9 cut(s) 916, 1162, 1181, 1717, 2032, 2276, 2279, 3122, 3199
BceAI ACGGC 2 cut(s) 565, 2248
BcgI CGANNNNNNTGC 2 cut(s) 1958, 1992
BciT130I CCWGG 2 cut(s) 2055, 3083
BciVI GTATCC 1 cut(s) 1033
BclI TGATCA 2 cut(s) 675, 1434
BcoDI GTCTC 8 cut(s) 357, 454, 524, 815, 1133, 1155, 2325, 2859
BfaI CTAG 5 cut(s) 131, 423, 611, 2646, 2943
BfmI CTRYAG 1 cut(s) 383
BfoI RGCGCY 4 cut(s) 41, 581, 752, 2636
BfrI CTTAAG 2 cut(s) 1067, 1411
BfuAI ACCTGC 2 cut(s) 934, 1963
BfuI GTATCC 1 cut(s) 1033
BglII AGATCT 3 cut(s) 115, 969, 2974
BmcAI AGTACT 1 cut(s) 3093
Bme1390I CCNGG 2 cut(s) 2055, 3083
Bme18I GGWCC 1 cut(s) 1796
BmgBI CACGTC 2 cut(s) 814, 1654
BmgT120I GGNCC 3 cut(s) 1796, 2288, 2690
BmiI GGNNCC 4 cut(s) 579, 1263, 1797, 2628
BmrFI CCNGG 2 cut(s) 2055, 3083
BmsI GCATC 5 cut(s) 919, 1024, 1201, 2402, 2422
BpiI GAAGAC 6 cut(s) 504, 1971, 2721, 2805, 2822, 3032
BplI GAGNNNNNCTC 2 cut(s) 956, 988
BpmI CTGGAG 1 cut(s) 3065
Bpu14I TTCGAA 2 cut(s) 194, 1256
BpuEI CTTGAG 4 cut(s) 983, 1616, 1927, 2422
Bsa29I ATCGAT 2 cut(s) 74, 832
BsaAI YACGTR 3 cut(s) 273, 914, 1702
BsaBI GATNNNNATC 1 cut(s) 2062
BsaHI GRCGYC 1 cut(s) 578
BsaI GGTCTC 1 cut(s) 357
BsaJI CCNNGG 7 cut(s) 146, 265, 759, 1384, 1959, 2053, 3171
Bsc4I CCNNNNNNNGG 6 cut(s) 587, 1532, 2144, 2565, 2898, 3082
Bse1I ACTGG 5 cut(s) 468, 1991, 2235, 2517, 2580
Bse3DI GCAATG 4 cut(s) 939, 1580, 2535, 2904
Bse8I GATNNNNATC 1 cut(s) 2062
BseBI CCWGG 2 cut(s) 2055, 3083
BseCI ATCGAT 2 cut(s) 74, 832
BseDI CCNNGG 7 cut(s) 146, 265, 759, 1384, 1959, 2053, 3171
BseJI GATNNNNATC 1 cut(s) 2062
BseLI CCNNNNNNNGG 6 cut(s) 587, 1532, 2144, 2565, 2898, 3082
BseMI GCAATG 4 cut(s) 939, 1580, 2535, 2904
BseMII CTCAG 5 cut(s) 124, 1128, 1196, 1412, 1605
BseNI ACTGG 5 cut(s) 468, 1991, 2235, 2517, 2580
BseRI GAGGAG 6 cut(s) 98, 606, 980, 2885, 2888, 3135
BseSI GKGCMC 1 cut(s) 2022
BseYI CCCAGC 1 cut(s) 991
BsgI GTGCAG 6 cut(s) 313, 546, 792, 1215, 1574, 1618
Bsh1236I CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
BshFI GGCC 6 cut(s) 29, 145, 467, 2289, 2365, 2692
BshNI GGYRCC 1 cut(s) 577
BshVI ATCGAT 2 cut(s) 74, 832
BsiHKAI GWGCWC 2 cut(s) 246, 2022
BsiSI CCGG 2 cut(s) 2138, 2630
BsiWI CGTACG 1 cut(s) 1674
BslFI GGGAC 5 cut(s) 512, 824, 2452, 2600, 3009
BslI CCNNNNNNNGG 6 cut(s) 587, 1532, 2144, 2565, 2898, 3082
BsmAI GTCTC 8 cut(s) 357, 454, 524, 815, 1133, 1155, 2325, 2859
BsmBI CGTCTC 3 cut(s) 1155, 2325, 2859
BsmFI GGGAC 5 cut(s) 512, 824, 2452, 2600, 3009
BsmI GAATGC 2 cut(s) 790, 2179
BsnI GGCC 6 cut(s) 29, 145, 467, 2289, 2365, 2692
Bso31I GGTCTC 1 cut(s) 357
Bsp119I TTCGAA 2 cut(s) 194, 1256
Bsp1286I GDGCHC 4 cut(s) 246, 999, 2022, 2454
Bsp19I CCATGG 3 cut(s) 759, 1384, 3171
BspANI GGCC 6 cut(s) 29, 145, 467, 2289, 2365, 2692
BspCNI CTCAG 5 cut(s) 123, 1129, 1197, 1411, 1604
BspDI ATCGAT 2 cut(s) 74, 832
BspFNI CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
BspHI TCATGA 4 cut(s) 1114, 1317, 2380, 2541
BspLI GGNNCC 4 cut(s) 579, 1263, 1797, 2628
BspMAI CTGCAG 1 cut(s) 387
BspMI ACCTGC 2 cut(s) 934, 1963
BspPI GGATC 7 cut(s) 158, 837, 2065, 2379, 2621, 2634, 3065
BspT104I TTCGAA 2 cut(s) 194, 1256
BspT107I GGYRCC 1 cut(s) 577
BspTI CTTAAG 2 cut(s) 1067, 1411
BspTNI GGTCTC 1 cut(s) 357
BsrBI CCGCTC 1 cut(s) 617
BsrDI GCAATG 4 cut(s) 939, 1580, 2535, 2904
BsrI ACTGG 5 cut(s) 468, 1991, 2235, 2517, 2580
BssECI CCNNGG 7 cut(s) 146, 265, 759, 1384, 1959, 2053, 3171
BssNI GRCGYC 1 cut(s) 578
BssT1I CCWWGG 4 cut(s) 759, 1384, 1959, 3171
Bst2UI CCWGG 2 cut(s) 2055, 3083
Bst4CI ACNGT 5 cut(s) 9, 266, 919, 1144, 2611
Bst6I CTCTTC 5 cut(s) 867, 1745, 1764, 2697, 3155
BstACI GRCGYC 1 cut(s) 578
BstAFI CTTAAG 2 cut(s) 1067, 1411
BstAPI GCANNNNNTGC 2 cut(s) 300, 3038
BstBAI YACGTR 3 cut(s) 273, 914, 1702
BstBI TTCGAA 2 cut(s) 194, 1256
BstC8I GCNNGC 4 cut(s) 215, 753, 2694, 3039
BstDSI CCRYGG 5 cut(s) 146, 265, 759, 1384, 3171
BstFNI CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
BstH2I RGCGCY 4 cut(s) 41, 581, 752, 2636
BstHHI GCGC 9 cut(s) 40, 394, 580, 751, 1039, 1981, 2213, 2635, 3007
BstMAI GTCTC 8 cut(s) 357, 454, 524, 815, 1133, 1155, 2325, 2859
BstNI CCWGG 2 cut(s) 2055, 3083
BstNSI RCATGY 1 cut(s) 943
BstSCI CCNGG 2 cut(s) 2053, 3081
BstSFI CTRYAG 1 cut(s) 383
BstSLI GKGCMC 1 cut(s) 2022
BstSNI TACGTA 1 cut(s) 1702
BstUI CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
BstV2I GAAGAC 6 cut(s) 504, 1971, 2721, 2805, 2822, 3032
BstX2I RGATCY 4 cut(s) 115, 969, 2626, 2974
BstYI RGATCY 4 cut(s) 115, 969, 2626, 2974
Bsu15I ATCGAT 2 cut(s) 74, 832
BsuI GTATCC 1 cut(s) 1033
BsuRI GGCC 6 cut(s) 29, 145, 467, 2289, 2365, 2692
BsuTUI ATCGAT 2 cut(s) 74, 832
BtgI CCRYGG 5 cut(s) 146, 265, 759, 1384, 3171
BtrI CACGTC 2 cut(s) 814, 1654
BtsI GCAGTG 1 cut(s) 2022
BtsIMutI CAGTG 9 cut(s) 5, 1016, 1599, 1984, 2022, 2034, 2168, 2524, 2616
BveI ACCTGC 2 cut(s) 934, 1963
Cac8I GCNNGC 4 cut(s) 215, 753, 2694, 3039
CaiI CAGNNNCTG 2 cut(s) 300, 2898
CciI TCATGA 4 cut(s) 1114, 1317, 2380, 2541
CfoI GCGC 9 cut(s) 40, 394, 580, 751, 1039, 1981, 2213, 2635, 3007
Cfr13I GGNCC 3 cut(s) 1796, 2288, 2690
Cfr42I CCGCGG 1 cut(s) 149
ClaI ATCGAT 2 cut(s) 74, 832
CseI GACGC 3 cut(s) 2307, 2482, 2597
DinI GGCGCC 1 cut(s) 579
DraIII CACNNNGTG 1 cut(s) 794
DrdI GACNNNNNNGTC 2 cut(s) 2462, 3017
DseDI GACNNNNNNGTC 2 cut(s) 2462, 3017
EaeI YGGCCR 2 cut(s) 27, 465
Eam1104I CTCTTC 5 cut(s) 867, 1745, 1764, 2697, 3155
EarI CTCTTC 5 cut(s) 867, 1745, 1764, 2697, 3155
EciI GGCGGA 1 cut(s) 2250
Ecl136II GAGCTC 1 cut(s) 244
Eco105I TACGTA 1 cut(s) 1702
Eco130I CCWWGG 4 cut(s) 759, 1384, 1959, 3171
Eco24I GRGCYC 3 cut(s) 246, 999, 2454
Eco31I GGTCTC 1 cut(s) 357
Eco32I GATATC 1 cut(s) 72
Eco47I GGWCC 1 cut(s) 1796
Eco47III AGCGCT 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 3 cut(s) 398, 2199, 2525
Eco72I CACGTG 1 cut(s) 273
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 1 cut(s) 1796
EcoRI GAATTC 2 cut(s) 1005, 2087
EcoRII CCWGG 2 cut(s) 2053, 3081
EcoRV GATATC 1 cut(s) 72
EcoT14I CCWWGG 4 cut(s) 759, 1384, 1959, 3171
EcoT38I GRGCYC 3 cut(s) 246, 999, 2454
EgeI GGCGCC 1 cut(s) 579
EheI GGCGCC 1 cut(s) 579
ErhI CCWWGG 4 cut(s) 759, 1384, 1959, 3171
Esp3I CGTCTC 3 cut(s) 1155, 2325, 2859
FalI AAGNNNNNCTT 4 cut(s) 395, 427, 1859, 1891
FaqI GGGAC 5 cut(s) 512, 824, 2452, 2600, 3009
FauI CCCGC 6 cut(s) 387, 760, 1795, 1802, 2216, 3083
FauNDI CATATG 1 cut(s) 1501
FbaI TGATCA 2 cut(s) 675, 1434
FblI GTMKAC 1 cut(s) 2471
FriOI GRGCYC 3 cut(s) 246, 999, 2454
FspBI CTAG 5 cut(s) 131, 423, 611, 2646, 2943
GlaI GCGC 9 cut(s) 39, 393, 579, 750, 1038, 1980, 2212, 2634, 3006
GsaI CCCAGC 1 cut(s) 995
GsuI CTGGAG 1 cut(s) 3065
HaeII RGCGCY 4 cut(s) 41, 581, 752, 2636
HaeIII GGCC 6 cut(s) 29, 145, 467, 2289, 2365, 2692
HapII CCGG 2 cut(s) 2138, 2630
HgaI GACGC 3 cut(s) 2307, 2482, 2597
HhaI GCGC 9 cut(s) 40, 394, 580, 751, 1039, 1981, 2213, 2635, 3007
Hin1I GRCGYC 1 cut(s) 578
Hin6I GCGC 9 cut(s) 38, 392, 578, 749, 1037, 1979, 2211, 2633, 3005
HinP1I GCGC 9 cut(s) 38, 392, 578, 749, 1037, 1979, 2211, 2633, 3005
HincII GTYRAC 2 cut(s) 2472, 3168
HindII GTYRAC 2 cut(s) 2472, 3168
HpaI GTTAAC 1 cut(s) 3168
HpaII CCGG 2 cut(s) 2138, 2630
HphI GGTGA 7 cut(s) 458, 685, 1183, 1430, 1444, 2128, 2521
Hpy166II GTNNAC 6 cut(s) 566, 2020, 2472, 2554, 3153, 3168
Hpy188I TCNGA 7 cut(s) 47, 113, 1206, 1666, 1894, 2062, 2163
Hpy8I GTNNAC 6 cut(s) 566, 2020, 2472, 2554, 3153, 3168
Hpy99I CGWCG 2 cut(s) 2476, 2994
HpyAV CCTTC 8 cut(s) 397, 683, 1051, 1224, 1252, 2078, 2500, 2692
HpyCH4III ACNGT 5 cut(s) 9, 266, 919, 1144, 2611
HpyCH4IV ACGT 6 cut(s) 177, 272, 813, 913, 1653, 1701
HpySE526I ACGT 6 cut(s) 177, 272, 813, 913, 1653, 1701
Hsp92I GRCGYC 1 cut(s) 578
HspAI GCGC 9 cut(s) 38, 392, 578, 749, 1037, 1979, 2211, 2633, 3005
KasI GGCGCC 1 cut(s) 577
Ksp22I TGATCA 2 cut(s) 675, 1434
KspAI GTTAAC 1 cut(s) 3168
KspI CCGCGG 1 cut(s) 149
LmnI GCTCC 8 cut(s) 35, 47, 276, 614, 950, 1133, 1267, 3209
LweI GCATC 5 cut(s) 919, 1024, 1201, 2402, 2422
MaeI CTAG 5 cut(s) 131, 423, 611, 2646, 2943
MaeII ACGT 6 cut(s) 177, 272, 813, 913, 1653, 1701
MaeIII GTNAC 7 cut(s) 814, 1144, 1714, 2116, 2519, 2611, 3062
MbiI CCGCTC 1 cut(s) 617
MfeI CAATTG 2 cut(s) 1719, 1974
MflI RGATCY 4 cut(s) 115, 969, 2626, 2974
MhlI GDGCHC 4 cut(s) 246, 999, 2022, 2454
Mly113I GGCGCC 1 cut(s) 578
MlyI GAGTC 5 cut(s) 128, 500, 518, 1623, 2933
MmeI TCCRAC 7 cut(s) 181, 348, 757, 901, 1513, 2478, 2604
MroXI GAANNNNTTC 2 cut(s) 1874, 2067
MslI CAYNNNNRTG 2 cut(s) 944, 1730
MspA1I CMGCKG 3 cut(s) 148, 297, 1781
MspCI CTTAAG 2 cut(s) 1067, 1411
MspI CCGG 2 cut(s) 2138, 2630
MspR9I CCNGG 2 cut(s) 2055, 3083
MunI CAATTG 2 cut(s) 1719, 1974
Mva1269I GAATGC 2 cut(s) 790, 2179
MvaI CCWGG 2 cut(s) 2055, 3083
MvnI CGCG 5 cut(s) 148, 394, 2211, 2318, 2591
NarI GGCGCC 1 cut(s) 578
NcoI CCATGG 3 cut(s) 759, 1384, 3171
NdeI CATATG 1 cut(s) 1501
NlaIV GGNNCC 4 cut(s) 579, 1263, 1797, 2628
NmeAIII GCCGAG 1 cut(s) 3067
NmuCI GTSAC 5 cut(s) 814, 1144, 2116, 2519, 2611
NspI RCATGY 1 cut(s) 943
NspV TTCGAA 2 cut(s) 194, 1256
PagI TCATGA 4 cut(s) 1114, 1317, 2380, 2541
PaqCI CACCTGC 1 cut(s) 934
PctI GAATGC 2 cut(s) 790, 2179
PdmI GAANNNNTTC 2 cut(s) 1874, 2067
PfeI GAWTC 7 cut(s) 1612, 1661, 1970, 2063, 2309, 2384, 2895
Pfl23II CGTACG 1 cut(s) 1674
PflMI CCANNNNNTGG 2 cut(s) 1532, 2898
PleI GAGTC 5 cut(s) 128, 499, 517, 1623, 2933
PluTI GGCGCC 1 cut(s) 581
PmaCI CACGTG 1 cut(s) 273
PmlI CACGTG 1 cut(s) 273
PpsI GAGTC 5 cut(s) 128, 499, 517, 1623, 2933
Ppu21I YACGTR 3 cut(s) 273, 914, 1702
PpuMI RGGWCCY 1 cut(s) 1796
Psp124BI GAGCTC 1 cut(s) 246
Psp5II RGGWCCY 1 cut(s) 1796
Psp6I CCWGG 2 cut(s) 2053, 3081
PspCI CACGTG 1 cut(s) 273
PspFI CCCAGC 1 cut(s) 991
PspGI CCWGG 2 cut(s) 2053, 3081
PspLI CGTACG 1 cut(s) 1674
PspN4I GGNNCC 4 cut(s) 579, 1263, 1797, 2628
PspPI GGNCC 3 cut(s) 1796, 2288, 2690
PspPPI RGGWCCY 1 cut(s) 1796
PstI CTGCAG 1 cut(s) 387
PstNI CAGNNNCTG 2 cut(s) 300, 2898
PsuI RGATCY 4 cut(s) 115, 969, 2626, 2974
PvuII CAGCTG 1 cut(s) 297
RseI CAYNNNNRTG 2 cut(s) 944, 1730
SacI GAGCTC 1 cut(s) 246
SacII CCGCGG 1 cut(s) 149
SalI GTCGAC 1 cut(s) 2470
Sau96I GGNCC 3 cut(s) 1796, 2288, 2690
ScaI AGTACT 1 cut(s) 3093
SchI GAGTC 5 cut(s) 128, 500, 518, 1623, 2933
ScrFI CCNGG 2 cut(s) 2055, 3083
SduI GDGCHC 4 cut(s) 246, 999, 2022, 2454
SfaNI GCATC 5 cut(s) 919, 1024, 1201, 2402, 2422
SfcI CTRYAG 1 cut(s) 383
SfoI GGCGCC 1 cut(s) 579
Sfr303I CCGCGG 1 cut(s) 149
SfuI TTCGAA 2 cut(s) 194, 1256
SgrBI CCGCGG 1 cut(s) 149
SinI GGWCC 1 cut(s) 1796
SmiMI CAYNNNNRTG 2 cut(s) 944, 1730
SmlI CTYRAG 6 cut(s) 998, 1067, 1411, 1631, 1906, 2401
SmoI CTYRAG 6 cut(s) 998, 1067, 1411, 1631, 1906, 2401
SnaBI TACGTA 1 cut(s) 1702
SspDI GGCGCC 1 cut(s) 577
SspI AATATT 1 cut(s) 363
SspMI CTAG 5 cut(s) 131, 423, 611, 2646, 2943
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 2053, 3081
StyI CCWWGG 4 cut(s) 759, 1384, 1959, 3171
TaaI ACNGT 5 cut(s) 9, 266, 919, 1144, 2611
TaiI ACGT 6 cut(s) 180, 275, 816, 916, 1656, 1704
TaqII GACCGA 2 cut(s) 833, 2759
TatI WGTACW 3 cut(s) 96, 3091, 3150
TauI GCSGC 3 cut(s) 29, 148, 620
TfiI GAWTC 7 cut(s) 1612, 1661, 1970, 2063, 2309, 2384, 2895
TscAI CASTG 9 cut(s) 12, 1016, 1599, 1991, 2022, 2034, 2175, 2524, 2616
TseFI GTSAC 5 cut(s) 814, 1144, 2116, 2519, 2611
Tsp45I GTSAC 5 cut(s) 814, 1144, 2116, 2519, 2611
TspGWI ACGGA 3 cut(s) 643, 1662, 2349
TspRI CASTG 9 cut(s) 12, 1016, 1599, 1991, 2022, 2034, 2175, 2524, 2616
Van91I CCANNNNNTGG 2 cut(s) 1532, 2898
Vha464I CTTAAG 2 cut(s) 1067, 1411
VneI GTGCAC 1 cut(s) 2018
VpaK11BI GGWCC 1 cut(s) 1796
XapI RAATTY 8 cut(s) 122, 1005, 1331, 1638, 1829, 2087, 2132, 2729
XceI RCATGY 1 cut(s) 943
XmiI GTMKAC 1 cut(s) 2471
XmnI GAANNNNTTC 2 cut(s) 1874, 2067
XspI CTAG 5 cut(s) 131, 423, 611, 2646, 2943
ZrmI AGTACT 1 cut(s) 3093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.