Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001301.1

Orthogroup ID

OG0000408

Physical Location & Seq

Genomic Coordinates Reverse (-)

9817 .. 11930

Gene Structure 2114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001301.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

atggctctggaattgatcggaggagcagtatttgcagtgctgtatgatggcgttaagcaagctatgggtaggactgagacgttcaaagagctcctcagagatctcaagttcaccttggagtgtttaagacggcaggccacggccatccaacagataggccagtataacgtggaattgggtctcccaaacgatgagatagaggaacttgaaagacaaatgcacagcggaacacgactcgtggggaagttgttgaattttcggtggtggaactactgctgcataaattgttacaccgaccaactagtcgacttggataggtccctaagaagactgttggaaaacctcatgttgcaagagataagggacgtgaaggagatattggatctgtcgaggaaaagccgcaaggagcttgaagaagtgaaggaggcacagttgagtatgcacaagttactgcagcagatagcagctcgagtagttgtaatggaagaggcctcaacttcggctgctgcaggaggaggtgctattgagatggtgccgaatcaaaatgaagggaatggcagcattcaagtggcatcattagatggagggacagggactgctctaggagcaatatttgggatgctacttgaactcgttatagaagtgaaggacaagaatgtgatgtttaagcctccgctccaagatctcaaatccactttagaatccttaaaaccatttgtcgaggagatggcacagcataacaaggtattgcatctcccacaggaggaactcaaaagatttgcagtggaaatggagaatggagtaaagctcgtttgcaagtgctctaaggttcgtttgtgggcaagctacaaaaagtacgaatacaccaacaaacttcttggattggatgagttttgccggagacaggcaagtgtactgagagagcaggtagcaagggatgtaagggagacgtcggcttccattagaaatgtgaaggaagagatgttggttttgttaagtaatacagagatggtgatcaagcgaatgaaatttagcactggttttgcacaaaaatcctttgataaggctcgatcgtcaatccctgaatgctatgaaacagtggctgatgatcaaaggcgtaaaatttttgagtttaagcgacatatcggacccatagcaggaggagctcccttcataacctgttataaatgcccataccccctgcagatacctgcaggttttcgcctttctaggagatggcagaaactcagatgtggcgcttgttcggcggttcttaagttttcactcagaatgaaatctcatgttgtcccatatgaagtatggagtgccaaagagcctccaacagctgaggatgacagaaacctggcttcaacatctcaacaatttgatagtcaacatgcggatcccgagacatattcccatgatttcgttgatagactcttatactacaaaagcacctctacccaagtaaatactggaacaccctctgattctatccaatgcgtttccgaaacatcggaaatctggaccaccgacttagaaagcagagatgaaagtatgtcttccccaacatcattcaggggcgtatctatgtatatttctgaccaggagcatgacctatcagaaaatttttttttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

546

Amino Acids

62.19

Weight (kDa)

6.11

Isoelectric Point (pI)

51.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000408)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica	MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica	Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis	pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis	RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata	RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora	Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii	Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa	Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha	Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana	Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1185
AasI	GACNNNNNNGTC	1 cut(s)	302
AatII	GACGTC	1 cut(s)	953
Acc36I	ACCTGC	3 cut(s)	916, 1205, 1219
AccB1I	GGYRCC	1 cut(s)	532
AccBSI	CCGCTC	1 cut(s)	676
AccI	GTMKAC	1 cut(s)	306
AciI	CCGC	5 cut(s)	225, 400, 674, 1268, 1400
AclWI	GGATC	3 cut(s)	390, 1397, 1410
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	4 cut(s)	253, 1028, 1122, 1627
AcyI	GRCGYC	1 cut(s)	950
AfaI	GTAC	2 cut(s)	857, 915
AfiI	CCNNNNNNNGG	3 cut(s)	763, 904, 1157
AflII	CTTAAG	1 cut(s)	1274
AgsI	TTSAA	7 cut(s)	85, 209, 253, 413, 566, 629, 1371
AhlI	ACTAGT	1 cut(s)	301
AjiI	CACGTC	1 cut(s)	367
AjnI	CCWGG	2 cut(s)	1362, 1605
AjuI	GAANNNNNNNTTGG	2 cut(s)	362, 394
AluBI	AGCT	8 cut(s)	62, 91, 409, 467, 808, 846, 1166, 1346
AluI	AGCT	8 cut(s)	62, 91, 409, 467, 808, 846, 1166, 1346
Alw21I	GWGCWC	3 cut(s)	93, 824, 1168
Alw26I	GTCTC	5 cut(s)	71, 185, 895, 941, 1403
AlwI	GGATC	3 cut(s)	390, 1397, 1410
AlwNI	CAGNNNCTG	2 cut(s)	596, 1103
Ama87I	CYCGRG	2 cut(s)	468, 1406
AoxI	GGCC	4 cut(s)	135, 141, 157, 489
ApeKI	GCWGC	6 cut(s)	276, 454, 464, 503, 506, 558
ApoI	RAATTY	4 cut(s)	253, 1028, 1122, 1627
AspLEI	GCGC	1 cut(s)	1259
AspS9I	GGNCC	3 cut(s)	318, 1148, 1527
AsuHPI	GGTGA	2 cut(s)	103, 1024
AvaI	CYCGRG	2 cut(s)	468, 1406
AvaII	GGWCC	3 cut(s)	318, 1148, 1527
BamHI	GGATCC	1 cut(s)	1402
BanI	GGYRCC	1 cut(s)	532
BanII	GRGCYC	2 cut(s)	93, 1168
BauI	CACGAG	1 cut(s)	236
BbsI	GAAGAC	2 cut(s)	334, 1554
Bbv12I	GWGCWC	3 cut(s)	93, 824, 1168
BbvCI	CCTCAGC	1 cut(s)	1347
BbvI	GCAGC	6 cut(s)	263, 466, 476, 490, 493, 570
BccI	CCATC	7 cut(s)	41, 152, 523, 575, 721, 1003, 1230
BceAI	ACGGC	2 cut(s)	146, 156
BciT130I	CCWGG	2 cut(s)	1364, 1607
BclI	TGATCA	2 cut(s)	1014, 1108
BcoDI	GTCTC	5 cut(s)	71, 185, 895, 941, 1403
BcuI	ACTAGT	1 cut(s)	301
BfaI	CTAG	3 cut(s)	302, 602, 1230
BfmI	CTRYAG	4 cut(s)	452, 507, 1202, 1212
BfoI	RGCGCY	1 cut(s)	1260
BfrI	CTTAAG	1 cut(s)	1274
BfuAI	ACCTGC	3 cut(s)	916, 1205, 1219
BglII	AGATCT	2 cut(s)	100, 682
BisI	GCNGC	7 cut(s)	277, 400, 455, 465, 504, 507, 559
BlsI	GCNGC	7 cut(s)	278, 401, 456, 466, 505, 508, 560
Bme1390I	CCNGG	2 cut(s)	1364, 1607
Bme18I	GGWCC	3 cut(s)	318, 1148, 1527
BmeT110I	CYCGRG	2 cut(s)	468, 1406
BmgBI	CACGTC	1 cut(s)	367
BmgT120I	GGNCC	3 cut(s)	318, 1148, 1527
BmiI	GGNNCC	4 cut(s)	320, 534, 1150, 1404
BmrFI	CCNGG	2 cut(s)	1364, 1607
BmsI	GCATC	3 cut(s)	581, 609, 760
BpiI	GAAGAC	2 cut(s)	334, 1554
BplI	GAGNNNNNCTC	2 cut(s)	792, 824
Bpu10I	CCTNAGC	1 cut(s)	1347
BpuEI	CTTGAG	1 cut(s)	89
BsaBI	GATNNNNATC	1 cut(s)	1013
BsaHI	GRCGYC	1 cut(s)	950
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	2 cut(s)	114, 138
BsaXI	ACNNNNNCTCC	4 cut(s)	12, 42, 416, 446
Bsc4I	CCNNNNNNNGG	3 cut(s)	763, 904, 1157
Bse1I	ACTGG	3 cut(s)	160, 1042, 1480
Bse8I	GATNNNNATC	1 cut(s)	1013
BseBI	CCWGG	2 cut(s)	1364, 1607
BseDI	CCNNGG	2 cut(s)	114, 138
BseGI	GGATG	5 cut(s)	144, 624, 892, 943, 1357
BseJI	GATNNNNATC	1 cut(s)	1013
BseLI	CCNNNNNNNGG	3 cut(s)	763, 904, 1157
BseMII	CTCAG	6 cut(s)	66, 109, 908, 1261, 1300, 1338
BseNI	ACTGG	3 cut(s)	160, 1042, 1480
BseRI	GAGGAG	5 cut(s)	36, 83, 528, 737, 1176
BseXI	GCAGC	6 cut(s)	263, 466, 476, 490, 493, 570
Bsh1285I	CGRYCG	1 cut(s)	1073
BshFI	GGCC	4 cut(s)	137, 143, 159, 491
BshNI	GGYRCC	1 cut(s)	532
BsiEI	CGRYCG	1 cut(s)	1073
BsiHKAI	GWGCWC	3 cut(s)	93, 824, 1168
BsiHKCI	CYCGRG	2 cut(s)	468, 1406
BsiSI	CCGG	1 cut(s)	898
BslFI	GGGAC	5 cut(s)	304, 377, 601, 607, 1292
BslI	CCNNNNNNNGG	3 cut(s)	763, 904, 1157
BsmAI	GTCTC	5 cut(s)	71, 185, 895, 941, 1403
BsmBI	CGTCTC	2 cut(s)	71, 941
BsmFI	GGGAC	5 cut(s)	304, 377, 601, 607, 1292
BsmI	GAATGC	2 cut(s)	561, 1091
BsnI	GGCC	4 cut(s)	137, 143, 159, 491
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	2 cut(s)	468, 1406
Bsp1286I	GDGCHC	3 cut(s)	93, 824, 1168
Bsp143I	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
BspACI	CCGC	5 cut(s)	225, 400, 674, 1268, 1400
BspANI	GGCC	4 cut(s)	137, 143, 159, 491
BspCNI	CTCAG	6 cut(s)	67, 108, 909, 1260, 1299, 1339
BspLI	GGNNCC	4 cut(s)	320, 534, 1150, 1404
BspMAI	CTGCAG	4 cut(s)	456, 511, 1206, 1216
BspMI	ACCTGC	3 cut(s)	916, 1205, 1219
BspPI	GGATC	3 cut(s)	390, 1397, 1410
BspT107I	GGYRCC	1 cut(s)	532
BspTI	CTTAAG	1 cut(s)	1274
BspTNI	GGTCTC	1 cut(s)	185
BsrBI	CCGCTC	1 cut(s)	676
BsrI	ACTGG	3 cut(s)	160, 1042, 1480
BssECI	CCNNGG	2 cut(s)	114, 138
BssMI	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
BssNI	GRCGYC	1 cut(s)	950
BssSI	CACGAG	1 cut(s)	236
BssT1I	CCWWGG	1 cut(s)	114
Bst2BI	CACGAG	1 cut(s)	236
Bst2UI	CCWGG	2 cut(s)	1364, 1607
Bst4CI	ACNGT	3 cut(s)	333, 432, 1099
Bst6I	CTCTTC	2 cut(s)	480, 972
BstACI	GRCGYC	1 cut(s)	950
BstAFI	CTTAAG	1 cut(s)	1274
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstC8I	GCNNGC	3 cut(s)	60, 135, 844
BstDEI	CTNAG	9 cut(s)	75, 95, 323, 825, 917, 1247, 1286, 1347, 1537
BstDSI	CCRYGG	1 cut(s)	138
BstF5I	GGATG	5 cut(s)	144, 624, 892, 943, 1357
BstH2I	RGCGCY	1 cut(s)	1260
BstHHI	GCGC	1 cut(s)	1259
BstKTI	GATC	8 cut(s)	18, 103, 385, 685, 1017, 1073, 1111, 1405
BstMAI	GTCTC	5 cut(s)	71, 185, 895, 941, 1403
BstMBI	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
BstMCI	CGRYCG	1 cut(s)	1073
BstMWI	GCNNNNNNNGC	4 cut(s)	32, 605, 1163, 1265
BstNI	CCWGG	2 cut(s)	1364, 1607
BstNSI	RCATGY	1 cut(s)	1400
BstSCI	CCNGG	2 cut(s)	1362, 1605
BstSFI	CTRYAG	4 cut(s)	452, 507, 1202, 1212
BstV1I	GCAGC	6 cut(s)	263, 466, 476, 490, 493, 570
BstV2I	GAAGAC	2 cut(s)	334, 1554
BstX2I	RGATCY	4 cut(s)	100, 382, 682, 1402
BstYI	RGATCY	4 cut(s)	100, 382, 682, 1402
BsuRI	GGCC	4 cut(s)	137, 143, 159, 491
BtgI	CCRYGG	1 cut(s)	138
BtrI	CACGTC	1 cut(s)	367
BtsCI	GGATG	5 cut(s)	144, 624, 892, 943, 1357
BtsI	GCAGTG	2 cut(s)	42, 789
BtsIMutI	CAGTG	4 cut(s)	42, 789, 1035, 1104
BveI	ACCTGC	3 cut(s)	916, 1205, 1219
Cac8I	GCNNGC	3 cut(s)	60, 135, 844
CaiI	CAGNNNCTG	2 cut(s)	596, 1103
CfoI	GCGC	1 cut(s)	1259
Cfr13I	GGNCC	3 cut(s)	318, 1148, 1527
Csp6I	GTAC	2 cut(s)	856, 914
CviAII	CATG	5 cut(s)	346, 1301, 1397, 1421, 1613
CviQI	GTAC	2 cut(s)	856, 914
DdeI	CTNAG	9 cut(s)	75, 95, 323, 825, 917, 1247, 1286, 1347, 1537
DpnI	GATC	8 cut(s)	17, 102, 384, 684, 1016, 1072, 1110, 1404
DpnII	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
DrdI	GACNNNNNNGTC	1 cut(s)	302
DseDI	GACNNNNNNGTC	1 cut(s)	302
EaeI	YGGCCR	1 cut(s)	141
Eam1104I	CTCTTC	2 cut(s)	480, 972
EarI	CTCTTC	2 cut(s)	480, 972
Ecl136II	GAGCTC	2 cut(s)	91, 1166
Eco130I	CCWWGG	1 cut(s)	114
Eco147I	AGGCCT	1 cut(s)	491
Eco24I	GRGCYC	2 cut(s)	93, 1168
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	3 cut(s)	318, 1148, 1527
Eco53kI	GAGCTC	2 cut(s)	91, 1166
Eco88I	CYCGRG	2 cut(s)	468, 1406
EcoICRI	GAGCTC	2 cut(s)	91, 1166
EcoO109I	RGGNCCY	1 cut(s)	318
EcoRII	CCWGG	2 cut(s)	1362, 1605
EcoT14I	CCWWGG	1 cut(s)	114
EcoT38I	GRGCYC	2 cut(s)	93, 1168
ErhI	CCWWGG	1 cut(s)	114
Esp3I	CGTCTC	2 cut(s)	71, 941
FaeI	CATG	5 cut(s)	349, 1304, 1400, 1424, 1616
FalI	AAGNNNNNCTT	4 cut(s)	98, 130, 1546, 1578
FaqI	GGGAC	5 cut(s)	304, 377, 601, 607, 1292
FatI	CATG	5 cut(s)	345, 1300, 1396, 1420, 1612
FauNDI	CATATG	1 cut(s)	1312
FbaI	TGATCA	2 cut(s)	1014, 1108
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	7 cut(s)	277, 400, 455, 465, 504, 507, 559
FokI	GGATG	5 cut(s)	131, 631, 899, 950, 1364
FriOI	GRGCYC	2 cut(s)	93, 1168
Fsp4HI	GCNGC	7 cut(s)	277, 400, 455, 465, 504, 507, 559
FspBI	CTAG	3 cut(s)	302, 602, 1230
GlaI	GCGC	1 cut(s)	1258
GluI	GCNGC	7 cut(s)	277, 400, 455, 465, 504, 507, 559
HaeII	RGCGCY	1 cut(s)	1260
HaeIII	GGCC	4 cut(s)	137, 143, 159, 491
HapII	CCGG	1 cut(s)	898
HhaI	GCGC	1 cut(s)	1259
Hin1I	GRCGYC	1 cut(s)	950
Hin1II	CATG	5 cut(s)	349, 1304, 1400, 1424, 1616
Hin6I	GCGC	1 cut(s)	1257
HinP1I	GCGC	1 cut(s)	1257
HincII	GTYRAC	2 cut(s)	307, 1394
HindII	GTYRAC	2 cut(s)	307, 1394
HinfI	GANTC	5 cut(s)	234, 538, 701, 1437, 1490
HpaII	CCGG	1 cut(s)	898
HphI	GGTGA	2 cut(s)	103, 1024
Hpy166II	GTNNAC	4 cut(s)	111, 307, 914, 1394
Hpy188III	TCNNGA	3 cut(s)	8, 1406, 1525
Hpy8I	GTNNAC	4 cut(s)	111, 307, 914, 1394
Hpy99I	CGWCG	1 cut(s)	955
HpyAV	CCTTC	6 cut(s)	364, 415, 542, 640, 967, 1180
HpyCH4III	ACNGT	3 cut(s)	333, 432, 1099
HpyCH4IV	ACGT	4 cut(s)	80, 168, 366, 950
HpyF10VI	GCNNNNNNNGC	4 cut(s)	32, 605, 1163, 1265
HpyF3I	CTNAG	9 cut(s)	75, 95, 323, 825, 917, 1247, 1286, 1347, 1537
HpySE526I	ACGT	4 cut(s)	80, 168, 366, 950
Hsp92I	GRCGYC	1 cut(s)	950
Hsp92II	CATG	5 cut(s)	349, 1304, 1400, 1424, 1616
HspAI	GCGC	1 cut(s)	1257
Ksp22I	TGATCA	2 cut(s)	1014, 1108
Kzo9I	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
LmnI	GCTCC	8 cut(s)	23, 96, 406, 605, 681, 1163, 1171, 1609
Lsp1109I	GCAGC	6 cut(s)	263, 466, 476, 490, 493, 570
LweI	GCATC	3 cut(s)	581, 609, 760
MaeI	CTAG	3 cut(s)	302, 602, 1230
MaeII	ACGT	4 cut(s)	80, 168, 366, 950
MaeIII	GTNAC	2 cut(s)	287, 447
MalI	GATC	8 cut(s)	17, 102, 384, 684, 1016, 1072, 1110, 1404
MbiI	CCGCTC	1 cut(s)	676
MboI	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
MboII	GAAGA	5 cut(s)	339, 425, 497, 989, 1554
MflI	RGATCY	4 cut(s)	100, 382, 682, 1402
MhlI	GDGCHC	3 cut(s)	93, 824, 1168
MluCI	AATT	8 cut(s)	11, 173, 253, 283, 1028, 1122, 1382, 1627
MlyI	GAGTC	2 cut(s)	228, 1431
MmeI	TCCRAC	3 cut(s)	172, 315, 1364
MseI	TTAA	7 cut(s)	54, 125, 666, 707, 995, 1134, 1275
MslI	CAYNNNNRTG	1 cut(s)	566
MspA1I	CMGCKG	2 cut(s)	225, 1346
MspCI	CTTAAG	1 cut(s)	1274
MspI	CCGG	1 cut(s)	898
MspR9I	CCNGG	2 cut(s)	1364, 1607
Mva1269I	GAATGC	2 cut(s)	561, 1091
MvaI	CCWGG	2 cut(s)	1364, 1607
MwoI	GCNNNNNNNGC	4 cut(s)	32, 605, 1163, 1265
NdeI	CATATG	1 cut(s)	1312
NdeII	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
NlaIII	CATG	5 cut(s)	349, 1304, 1400, 1424, 1616
NlaIV	GGNNCC	4 cut(s)	320, 534, 1150, 1404
NspI	RCATGY	1 cut(s)	1400
PaeR7I	CTCGAG	1 cut(s)	468
PceI	AGGCCT	1 cut(s)	491
PctI	GAATGC	2 cut(s)	561, 1091
PfeI	GAWTC	3 cut(s)	538, 701, 1490
PkrI	GCNGC	7 cut(s)	278, 401, 456, 466, 505, 508, 560
Ple19I	CGATCG	1 cut(s)	1073
PleI	GAGTC	2 cut(s)	228, 1431
PpsI	GAGTC	2 cut(s)	228, 1431
PpuMI	RGGWCCY	1 cut(s)	318
PsiI	TTATAA	1 cut(s)	1185
Psp124BI	GAGCTC	2 cut(s)	93, 1168
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	2 cut(s)	1362, 1605
PspGI	CCWGG	2 cut(s)	1362, 1605
PspN4I	GGNNCC	4 cut(s)	320, 534, 1150, 1404
PspPI	GGNCC	3 cut(s)	318, 1148, 1527
PspPPI	RGGWCCY	1 cut(s)	318
PspXI	VCTCGAGB	1 cut(s)	468
PstI	CTGCAG	4 cut(s)	456, 511, 1206, 1216
PstNI	CAGNNNCTG	2 cut(s)	596, 1103
PsuI	RGATCY	4 cut(s)	100, 382, 682, 1402
PvuI	CGATCG	1 cut(s)	1073
PvuII	CAGCTG	1 cut(s)	1346
RsaI	GTAC	2 cut(s)	857, 915
RsaNI	GTAC	2 cut(s)	856, 914
RseI	CAYNNNNRTG	1 cut(s)	566
SacI	GAGCTC	2 cut(s)	93, 1168
SalI	GTCGAC	1 cut(s)	305
SaqAI	TTAA	7 cut(s)	54, 125, 666, 707, 995, 1134, 1275
SatI	GCNGC	7 cut(s)	277, 400, 455, 465, 504, 507, 559
Sau3AI	GATC	8 cut(s)	15, 100, 382, 682, 1014, 1070, 1108, 1402
Sau96I	GGNCC	3 cut(s)	318, 1148, 1527
SbfI	CCTGCAGG	1 cut(s)	1216
SchI	GAGTC	2 cut(s)	228, 1431
ScrFI	CCNGG	2 cut(s)	1364, 1607
SdaI	CCTGCAGG	1 cut(s)	1216
SduI	GDGCHC	3 cut(s)	93, 824, 1168
SfaNI	GCATC	3 cut(s)	581, 609, 760
SfcI	CTRYAG	4 cut(s)	452, 507, 1202, 1212
Sfr274I	CTCGAG	1 cut(s)	468
SinI	GGWCC	3 cut(s)	318, 1148, 1527
SlaI	CTCGAG	1 cut(s)	468
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	3 cut(s)	104, 468, 1274
SmoI	CTYRAG	3 cut(s)	104, 468, 1274
SpeI	ACTAGT	1 cut(s)	301
Sse8387I	CCTGCAGG	1 cut(s)	1216
Sse9I	AATT	8 cut(s)	11, 173, 253, 283, 1028, 1122, 1382, 1627
SseBI	AGGCCT	1 cut(s)	491
SsiI	CCGC	5 cut(s)	225, 400, 674, 1268, 1400
SspI	AATATT	1 cut(s)	612
SspMI	CTAG	3 cut(s)	302, 602, 1230
SstI	GAGCTC	2 cut(s)	93, 1168
StuI	AGGCCT	1 cut(s)	491
StyD4I	CCNGG	2 cut(s)	1362, 1605
StyI	CCWWGG	1 cut(s)	114
TaaI	ACNGT	3 cut(s)	333, 432, 1099
TaiI	ACGT	4 cut(s)	83, 171, 369, 953
TaqI	TCGA	5 cut(s)	306, 389, 469, 720, 1069
TasI	AATT	8 cut(s)	11, 173, 253, 283, 1028, 1122, 1382, 1627
TatI	WGTACW	1 cut(s)	913
TauI	GCSGC	1 cut(s)	402
TfiI	GAWTC	3 cut(s)	538, 701, 1490
Tru1I	TTAA	7 cut(s)	54, 125, 666, 707, 995, 1134, 1275
Tru9I	TTAA	7 cut(s)	54, 125, 666, 707, 995, 1134, 1275
TscAI	CASTG	4 cut(s)	42, 789, 1042, 1104
TseI	GCWGC	6 cut(s)	276, 454, 464, 503, 506, 558
TspDTI	ATGAA	7 cut(s)	561, 1040, 1107, 1162, 1307, 1329, 1566
TspRI	CASTG	4 cut(s)	42, 789, 1042, 1104
Vha464I	CTTAAG	1 cut(s)	1274
VpaK11BI	GGWCC	3 cut(s)	318, 1148, 1527
XapI	RAATTY	4 cut(s)	253, 1028, 1122, 1627
XceI	RCATGY	1 cut(s)	1400
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1317, 1472
XhoI	CTCGAG	1 cut(s)	468
XmiI	GTMKAC	1 cut(s)	306
XspI	CTAG	3 cut(s)	302, 602, 1230
ZraI	GACGTC	1 cut(s)	951

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.