Rw7G027300
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
35211279 .. 35212971
1693 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G027300.1

Sequence Viewer

Length: 1131 bp
ATGGAAGAGGCCTCAACTTCGGCTGCTGCAGGAGGAGGTGCTATTGAGATGGTGCCGAATCAAAATGAAGGGAATGGCGGCATTCAAGTGGCATCATTAGATAGAGGGACAGGGACTGCTCTAGGAGCAATATTTGGGATGCTACTTGAACTCGTTATAGAAGTGAAGGACAAGAATGTGATGTTTAAGCCTCCGCTCCAAGATCTCAAATCCACTTTAGAATCCTTAAAACCATTTGTCGAGGAGATGGCACAGCATAACAAGGTATTGCATCTCCCACAGGAGGAACTCAAAAGATTTGCAGTGGAAATGGAGAATGGAGTAAAGCTCGTTTGCAAGTGCTCTAAGGTTCGTTTGTGGGCAAGCTACAAAAAGTACGAATACACCAACAAACTTCTTGGATTGGATGAGTTTTGCCGGAGACAGGCAAGTGTACTGAGAGAGCAGGTAGCAAGGGATGTAAGGGAGACGTCGGCTTCCATTAGGAATGTGAAGGAAGAGATGTTGGTTTTGTTAAGTAATACAGAGATGGTGATCAAGCGAATGAAATTTAGCACTGGTTTTGCACAAAAATCCTTTGATAAGGCTCGATCGTCAATCCCTGAATGCTATGAAACAGTGGCTGATGATCAAAGGCGTAAAATTTTTGAGTTTAAGCGACATATCGGACCCATAGCAGGAGGAGCTCCCTTCATAACCTGTTATAAATGCCCATACCCCCTGCAGATACCTGCAGGTTTTCGCCTTTCTAGGAGATGGCAGAAACTCAGATGTGGCGCTTGTTCGGCGGTTCTTAAGTTTTCACTCAGAATGAAATCTCATGTTGTCCCATATGAAGTTCTTAAGTTTTCACTCAGAATGAAATCTCATGTTGTCCCATATGAAGTATGGAGTGCCAAAGAGCCTCCAACAGCTGAGGATGACAGAAACCTGGCTTCAACATCTCAACAATTTGATAGTCAACATGCGGATCCCGAGACATATTCCCATGATTTCGTTGATAGACTCTTATACTACAAAAGCACCTCTACCCAAGTAAATACTGGAACACCCTCTGATTCTATCCAATGCGTTTCCGAAACATCGGAAATCTGGACCACCGACTTAGAAAGCAGAGATGAAAGGCGGTAA

Protein Analysis

376

Amino Acids

42.59

Weight (kDa)

8.45

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 38 - 166 9.9e-29 Arabidopsis broad-spectrum mildew resistance protein RPW8
Zn_ribbon_12 PF11331 226 - 269 4.7e-17 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000408)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g11090 FvH4_5g11120 FvH4_5g11130 FvH4_5g11160 FvH4_5g11200 FvH4_5g11201 FvH4_5g11220 FvH4_5g11230 FvH4_5g11231 FvH4_5g11250
malus_domestica MD02G1021700.v1.1 MD02G1022000.v1.1 MD06G1115400.v1.1 MD06G1115800.v1.1 MD06G1116100.v1.1 MD15G1278700.v1.1
prunus_persica Prupe.5G127700_v2.0.a1 Prupe.5G127800_v2.0.a1 Prupe.5G127900_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1 Prupe.7G138400_v2.0.a1
pyrus_communis pycom06g10800 pycom06g10840 pycom14g10990 pycom15g24080 pycom15g24110 pycom15g24120
rosa_chinensis RchiOBHm_Chr2g0104561 RchiOBHm_Chr7g0186621 RchiOBHm_Chr7g0186631 RchiOBHm_Chr7g0186691
rosa_laevigata RLG00000002334 RLG00000004825 RLG00000004827 RLG00000004828 RLG00000014202
rosa_multiflora Rmu_sc0000645.1_g000001 Rmu_sc0000645.1_g000011 Rmu_sc0000645.1_g000016 Rmu_sc0001301.1_g000003 Rmu_sc0001852.1_g000020 Rmu_sc0002316.1_g000047 Rmu_sc0003419.1_g000031 Rmu_sc0003825.1_g000016 Rmu_sc0005784.1_g000004 Rmu_sc0005784.1_g000013 Rmu_sc0005784.1_g000014 Rmu_sc0007722.1_g000010 Rmu_sc0007722.1_g000018
rosa_roxburghii Rroxscaffold_3G00240400 Rroxscaffold_3G00267900 Rroxscaffold_3G00267910 Rroxscaffold_3G00267940 Rroxscaffold_3G00267990 Rroxscaffold_3G00268000
rosa_rugosa Rorug02G0116000 Rorug02G0120800 Rorug02G0120900 Rorug06G0475500 Rorug06G0475600 Rorug06G0475600 Rorug06G0475700
rosa_samantha Rh2AG164300 Rh2AG171300 Rh2AG173100 Rh2BG171500 Rh2BG178600 Rh2BG180800 Rh2DG169600 Rh2DG177300 Rh2DG179300 Rh7AG065000 Rh7AG065200 Rh7AG065300 Rh7AG321500 Rh7AG321700 Rh7AG322300 Rh7AG322400 Rh7BG081200 Rh7BG081300 Rh7BG313300 Rh7CG082400 Rh7CG082600 Rh7CG338000 Rh7CG338200 Rh7CG339000 Rh7CG339100 Rh7DG083400 Rh7DG083500 Rh7DG083700 Rh7DG319500 Rh7DG319600
rosa_wichuraiana Rw0G013250 Rw7G006930 Rw7G006940 Rw7G007150 Rw7G007180 Rw7G026920 Rw7G027300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 705
AatII GACGTC 1 cut(s) 473
Acc36I ACCTGC 3 cut(s) 436, 725, 739
AccB1I GGYRCC 1 cut(s) 52
AccBSI CCGCTC 1 cut(s) 196
AciI CCGC 5 cut(s) 78, 194, 788, 968, 1126
AclWI GGATC 2 cut(s) 965, 978
AcsI RAATTY 2 cut(s) 548, 642
AcyI GRCGYC 1 cut(s) 470
AfaI GTAC 2 cut(s) 377, 435
AfiI CCNNNNNNNGG 3 cut(s) 283, 424, 677
AflII CTTAAG 2 cut(s) 794, 842
AgsI TTSAA 3 cut(s) 86, 149, 939
AjnI CCWGG 1 cut(s) 930
AluBI AGCT 4 cut(s) 328, 366, 686, 914
AluI AGCT 4 cut(s) 328, 366, 686, 914
Alw21I GWGCWC 2 cut(s) 344, 688
Alw26I GTCTC 3 cut(s) 415, 461, 971
AlwI GGATC 2 cut(s) 965, 978
AlwNI CAGNNNCTG 2 cut(s) 116, 623
Ama87I CYCGRG 1 cut(s) 974
AoxI GGCC 1 cut(s) 9
ApeKI GCWGC 2 cut(s) 23, 26
ApoI RAATTY 2 cut(s) 548, 642
AspLEI GCGC 1 cut(s) 779
AspS9I GGNCC 2 cut(s) 668, 1095
AsuHPI GGTGA 1 cut(s) 544
AvaI CYCGRG 1 cut(s) 974
AvaII GGWCC 2 cut(s) 668, 1095
BamHI GGATCC 1 cut(s) 970
BanI GGYRCC 1 cut(s) 52
BanII GRGCYC 1 cut(s) 688
Bbv12I GWGCWC 2 cut(s) 344, 688
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 2 cut(s) 10, 13
BccI CCATC 4 cut(s) 43, 241, 523, 750
BciT130I CCWGG 1 cut(s) 932
BclI TGATCA 2 cut(s) 534, 628
BcoDI GTCTC 3 cut(s) 415, 461, 971
BfaI CTAG 2 cut(s) 122, 750
BfmI CTRYAG 3 cut(s) 27, 722, 732
BfoI RGCGCY 1 cut(s) 780
BfrI CTTAAG 2 cut(s) 794, 842
BfuAI ACCTGC 3 cut(s) 436, 725, 739
BglII AGATCT 1 cut(s) 202
BisI GCNGC 3 cut(s) 24, 27, 79
BlsI GCNGC 3 cut(s) 25, 28, 80
Bme1390I CCNGG 1 cut(s) 932
Bme18I GGWCC 2 cut(s) 668, 1095
BmeT110I CYCGRG 1 cut(s) 974
BmgT120I GGNCC 2 cut(s) 668, 1095
BmiI GGNNCC 3 cut(s) 54, 670, 972
BmrFI CCNGG 1 cut(s) 932
BmsI GCATC 3 cut(s) 101, 129, 280
BplI GAGNNNNNCTC 2 cut(s) 312, 344
Bpu10I CCTNAGC 1 cut(s) 915
BsaBI GATNNNNATC 1 cut(s) 533
BsaHI GRCGYC 1 cut(s) 470
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 424, 677
Bse1I ACTGG 2 cut(s) 562, 1048
Bse8I GATNNNNATC 1 cut(s) 533
BseBI CCWGG 1 cut(s) 932
BseGI GGATG 4 cut(s) 144, 412, 463, 925
BseJI GATNNNNATC 1 cut(s) 533
BseLI CCNNNNNNNGG 3 cut(s) 283, 424, 677
BseMII CTCAG 5 cut(s) 428, 781, 820, 868, 906
BseNI ACTGG 2 cut(s) 562, 1048
BseRI GAGGAG 3 cut(s) 48, 257, 696
BseXI GCAGC 2 cut(s) 10, 13
Bsh1285I CGRYCG 1 cut(s) 593
BshFI GGCC 1 cut(s) 11
BshNI GGYRCC 1 cut(s) 52
BsiEI CGRYCG 1 cut(s) 593
BsiHKAI GWGCWC 2 cut(s) 344, 688
BsiHKCI CYCGRG 1 cut(s) 974
BsiSI CCGG 1 cut(s) 418
BslFI GGGAC 4 cut(s) 121, 127, 812, 860
BslI CCNNNNNNNGG 3 cut(s) 283, 424, 677
BsmAI GTCTC 3 cut(s) 415, 461, 971
BsmBI CGTCTC 1 cut(s) 461
BsmFI GGGAC 4 cut(s) 121, 127, 812, 860
BsmI GAATGC 2 cut(s) 81, 611
BsnI GGCC 1 cut(s) 11
BsoBI CYCGRG 1 cut(s) 974
Bsp1286I GDGCHC 2 cut(s) 344, 688
Bsp143I GATC 5 cut(s) 202, 534, 590, 628, 970
BspACI CCGC 5 cut(s) 78, 194, 788, 968, 1126
BspANI GGCC 1 cut(s) 11
BspCNI CTCAG 5 cut(s) 429, 780, 819, 867, 907
BspLI GGNNCC 3 cut(s) 54, 670, 972
BspMAI CTGCAG 3 cut(s) 31, 726, 736
BspMI ACCTGC 3 cut(s) 436, 725, 739
BspPI GGATC 2 cut(s) 965, 978
BspT107I GGYRCC 1 cut(s) 52
BspTI CTTAAG 2 cut(s) 794, 842
BsrBI CCGCTC 1 cut(s) 196
BsrI ACTGG 2 cut(s) 562, 1048
BssMI GATC 5 cut(s) 202, 534, 590, 628, 970
BssNI GRCGYC 1 cut(s) 470
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 1 cut(s) 619
Bst6I CTCTTC 1 cut(s) 492
BstACI GRCGYC 1 cut(s) 470
BstAFI CTTAAG 2 cut(s) 794, 842
BstC8I GCNNGC 1 cut(s) 364
BstDEI CTNAG 7 cut(s) 345, 437, 767, 806, 854, 915, 1105
BstF5I GGATG 4 cut(s) 144, 412, 463, 925
BstH2I RGCGCY 1 cut(s) 780
BstHHI GCGC 1 cut(s) 779
BstKTI GATC 5 cut(s) 205, 537, 593, 631, 973
BstMAI GTCTC 3 cut(s) 415, 461, 971
BstMBI GATC 5 cut(s) 202, 534, 590, 628, 970
BstMCI CGRYCG 1 cut(s) 593
BstMWI GCNNNNNNNGC 3 cut(s) 125, 683, 785
BstNI CCWGG 1 cut(s) 932
BstNSI RCATGY 1 cut(s) 968
BstSCI CCNGG 1 cut(s) 930
BstSFI CTRYAG 3 cut(s) 27, 722, 732
BstV1I GCAGC 2 cut(s) 10, 13
BstX2I RGATCY 2 cut(s) 202, 970
BstYI RGATCY 2 cut(s) 202, 970
BsuRI GGCC 1 cut(s) 11
BtsCI GGATG 4 cut(s) 144, 412, 463, 925
BtsI GCAGTG 1 cut(s) 309
BtsIMutI CAGTG 3 cut(s) 309, 555, 624
BveI ACCTGC 3 cut(s) 436, 725, 739
Cac8I GCNNGC 1 cut(s) 364
CaiI CAGNNNCTG 2 cut(s) 116, 623
CfoI GCGC 1 cut(s) 779
Cfr13I GGNCC 2 cut(s) 668, 1095
Csp6I GTAC 2 cut(s) 376, 434
CviAII CATG 4 cut(s) 821, 869, 965, 989
CviQI GTAC 2 cut(s) 376, 434
DdeI CTNAG 7 cut(s) 345, 437, 767, 806, 854, 915, 1105
DpnI GATC 5 cut(s) 204, 536, 592, 630, 972
DpnII GATC 5 cut(s) 202, 534, 590, 628, 970
Eam1104I CTCTTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 686
Eco147I AGGCCT 1 cut(s) 11
Eco24I GRGCYC 1 cut(s) 688
Eco47I GGWCC 2 cut(s) 668, 1095
Eco53kI GAGCTC 1 cut(s) 686
Eco88I CYCGRG 1 cut(s) 974
EcoICRI GAGCTC 1 cut(s) 686
EcoRII CCWGG 1 cut(s) 930
EcoT38I GRGCYC 1 cut(s) 688
Esp3I CGTCTC 1 cut(s) 461
FaeI CATG 4 cut(s) 824, 872, 968, 992
FaqI GGGAC 4 cut(s) 121, 127, 812, 860
FatI CATG 4 cut(s) 820, 868, 964, 988
FauNDI CATATG 2 cut(s) 832, 880
FbaI TGATCA 2 cut(s) 534, 628
Fnu4HI GCNGC 3 cut(s) 24, 27, 79
FokI GGATG 4 cut(s) 151, 419, 470, 932
FriOI GRGCYC 1 cut(s) 688
Fsp4HI GCNGC 3 cut(s) 24, 27, 79
FspBI CTAG 2 cut(s) 122, 750
GlaI GCGC 1 cut(s) 778
GluI GCNGC 3 cut(s) 24, 27, 79
HaeII RGCGCY 1 cut(s) 780
HaeIII GGCC 1 cut(s) 11
HapII CCGG 1 cut(s) 418
HhaI GCGC 1 cut(s) 779
Hin1I GRCGYC 1 cut(s) 470
Hin1II CATG 4 cut(s) 824, 872, 968, 992
Hin6I GCGC 1 cut(s) 777
HinP1I GCGC 1 cut(s) 777
HincII GTYRAC 1 cut(s) 962
HindII GTYRAC 1 cut(s) 962
HinfI GANTC 4 cut(s) 58, 221, 1005, 1058
HpaII CCGG 1 cut(s) 418
HphI GGTGA 1 cut(s) 544
Hpy166II GTNNAC 2 cut(s) 434, 962
Hpy188I TCNGA 7 cut(s) 668, 770, 809, 857, 1057, 1078, 1087
Hpy188III TCNNGA 2 cut(s) 974, 1093
Hpy8I GTNNAC 2 cut(s) 434, 962
Hpy99I CGWCG 1 cut(s) 475
HpyAV CCTTC 4 cut(s) 62, 160, 487, 700
HpyCH4III ACNGT 1 cut(s) 619
HpyCH4IV ACGT 1 cut(s) 470
HpyCH4V TGCA 7 cut(s) 29, 271, 302, 336, 566, 724, 734
HpyF10VI GCNNNNNNNGC 3 cut(s) 125, 683, 785
HpyF3I CTNAG 7 cut(s) 345, 437, 767, 806, 854, 915, 1105
HpySE526I ACGT 1 cut(s) 470
Hsp92I GRCGYC 1 cut(s) 470
Hsp92II CATG 4 cut(s) 824, 872, 968, 992
HspAI GCGC 1 cut(s) 777
Ksp22I TGATCA 2 cut(s) 534, 628
Kzo9I GATC 5 cut(s) 202, 534, 590, 628, 970
LmnI GCTCC 4 cut(s) 125, 201, 683, 691
Lsp1109I GCAGC 2 cut(s) 10, 13
LweI GCATC 3 cut(s) 101, 129, 280
MaeI CTAG 2 cut(s) 122, 750
MaeII ACGT 1 cut(s) 470
MalI GATC 5 cut(s) 204, 536, 592, 630, 972
MbiI CCGCTC 1 cut(s) 196
MboI GATC 5 cut(s) 202, 534, 590, 628, 970
MboII GAAGA 2 cut(s) 17, 509
MflI RGATCY 2 cut(s) 202, 970
MhlI GDGCHC 2 cut(s) 344, 688
MluCI AATT 3 cut(s) 548, 642, 950
MlyI GAGTC 1 cut(s) 999
MmeI TCCRAC 1 cut(s) 932
MseI TTAA 6 cut(s) 186, 227, 515, 654, 795, 843
MslI CAYNNNNRTG 1 cut(s) 86
MspA1I CMGCKG 1 cut(s) 914
MspCI CTTAAG 2 cut(s) 794, 842
MspI CCGG 1 cut(s) 418
MspR9I CCNGG 1 cut(s) 932
Mva1269I GAATGC 2 cut(s) 81, 611
MvaI CCWGG 1 cut(s) 932
MwoI GCNNNNNNNGC 3 cut(s) 125, 683, 785
NdeI CATATG 2 cut(s) 832, 880
NdeII GATC 5 cut(s) 202, 534, 590, 628, 970
NlaIII CATG 4 cut(s) 824, 872, 968, 992
NlaIV GGNNCC 3 cut(s) 54, 670, 972
NspI RCATGY 1 cut(s) 968
PceI AGGCCT 1 cut(s) 11
PctI GAATGC 2 cut(s) 81, 611
PfeI GAWTC 3 cut(s) 58, 221, 1058
PkrI GCNGC 3 cut(s) 25, 28, 80
Ple19I CGATCG 1 cut(s) 593
PleI GAGTC 1 cut(s) 999
PpsI GAGTC 1 cut(s) 999
PsiI TTATAA 1 cut(s) 705
Psp124BI GAGCTC 1 cut(s) 688
Psp6I CCWGG 1 cut(s) 930
PspGI CCWGG 1 cut(s) 930
PspN4I GGNNCC 3 cut(s) 54, 670, 972
PspPI GGNCC 2 cut(s) 668, 1095
PstI CTGCAG 3 cut(s) 31, 726, 736
PstNI CAGNNNCTG 2 cut(s) 116, 623
PsuI RGATCY 2 cut(s) 202, 970
PvuI CGATCG 1 cut(s) 593
PvuII CAGCTG 1 cut(s) 914
RsaI GTAC 2 cut(s) 377, 435
RsaNI GTAC 2 cut(s) 376, 434
RseI CAYNNNNRTG 1 cut(s) 86
SacI GAGCTC 1 cut(s) 688
SaqAI TTAA 6 cut(s) 186, 227, 515, 654, 795, 843
SatI GCNGC 3 cut(s) 24, 27, 79
Sau3AI GATC 5 cut(s) 202, 534, 590, 628, 970
Sau96I GGNCC 2 cut(s) 668, 1095
SbfI CCTGCAGG 1 cut(s) 736
SchI GAGTC 1 cut(s) 999
ScrFI CCNGG 1 cut(s) 932
SdaI CCTGCAGG 1 cut(s) 736
SduI GDGCHC 2 cut(s) 344, 688
SfaNI GCATC 3 cut(s) 101, 129, 280
SfcI CTRYAG 3 cut(s) 27, 722, 732
SinI GGWCC 2 cut(s) 668, 1095
SmiMI CAYNNNNRTG 1 cut(s) 86
SmlI CTYRAG 2 cut(s) 794, 842
SmoI CTYRAG 2 cut(s) 794, 842
Sse8387I CCTGCAGG 1 cut(s) 736
Sse9I AATT 3 cut(s) 548, 642, 950
SseBI AGGCCT 1 cut(s) 11
SsiI CCGC 5 cut(s) 78, 194, 788, 968, 1126
SspI AATATT 1 cut(s) 132
SspMI CTAG 2 cut(s) 122, 750
SstI GAGCTC 1 cut(s) 688
StuI AGGCCT 1 cut(s) 11
StyD4I CCNGG 1 cut(s) 930
TaaI ACNGT 1 cut(s) 619
TaiI ACGT 1 cut(s) 473
TaqI TCGA 2 cut(s) 240, 589
TasI AATT 3 cut(s) 548, 642, 950
TatI WGTACW 1 cut(s) 433
TauI GCSGC 1 cut(s) 81
TfiI GAWTC 3 cut(s) 58, 221, 1058
Tru1I TTAA 6 cut(s) 186, 227, 515, 654, 795, 843
Tru9I TTAA 6 cut(s) 186, 227, 515, 654, 795, 843
TscAI CASTG 3 cut(s) 309, 562, 624
TseI GCWGC 2 cut(s) 23, 26
TspDTI ATGAA 8 cut(s) 81, 560, 627, 682, 827, 849, 875, 897
TspRI CASTG 3 cut(s) 309, 562, 624
Vha464I CTTAAG 2 cut(s) 794, 842
VpaK11BI GGWCC 2 cut(s) 668, 1095
XapI RAATTY 2 cut(s) 548, 642
XceI RCATGY 1 cut(s) 968
XcmI CCANNNNNNNNNTGG 2 cut(s) 885, 1040
XspI CTAG 2 cut(s) 122, 750
ZraI GACGTC 1 cut(s) 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.