Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

33404280 .. 33408983

Gene Structure 4704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G363300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2934 bp

ATGGTAAGCTCCAGTTGCTGCCAGATTCTCACCATTTGCTTTATGATTTTCCTTTTGTGCTCAGCCTGCGGCGGATACAGTGACCTTCACGCACTGTTGAAACTCAAGTCCGCCATGATTGGACCCAAAGGTTCAGGCCTCGAGGACTGGAACACTTCGTCGTTGTCTCCCTCATCTCACTGCTCCTTCTCCGGAGTTTCGTGCGACCGCGACTTCCGAGTGGTTGCTCTCAACGTCTCCAATCAGCCTCTGTTAGGCACTCTTCCGCCGGAGATTGGGCTCCTCAACAAGCTGGTCAACCTCACAATCGCCGGAGACAACATCACAGGGAGGCTTCCAATGCAGATGGCCAACCTCACCGCTCTCAGGCACTTGAACATCTCCAACAACGTCTTCAGGGGCAGATTCCCCGGCAATATCACGCTCCAAATGACGGAGCTCCAAGTTCTCGACGCCTACAACAACAACTTCACGGGCACACTTCCTTTGGAGATCGTCAATCTCAAAAACCTCAAACATCTCCAACTAGGCGGGAACTACTTCACCGGCAACATCCCCGAAACTTACTCGGAGATGCAGAGCTTGGAGCATTTCGGCCTCAACGGCAACTGGCTCACCGGAAAGTTCCCGGCGAGCTTGGCTCGTTTGAAAAATCTCAAGGAAATGTACGTCGGCTACTTTAACAGTTACGACGGCGGAATTCCGCCGGAGTTGGGATCGTTGAGCTCTCTGCAGGTCCTCGACATGGCCAGCTGTAACCTCAGCGGCACCATACCCACCAATCTCAGCCTTTTGAAGAATTTGAACTCTCTGTTTTTACAGGTAAATCGTCTCAGCGGCGGCATACCTCCGGAATTATCTGGCTTGGTCAGCCTCATGTCTTTGGATCTCTCCATCAACGATCTCACCGGAGAGATACCCCAGAGCTTCTCAGAGCTGAAGAACATCACGCTTATCAATTTGTACAAGAACAATCTTTACGGCCCAATTCCCAGGTTCGTCGGTGATTTTCCTCATCTGGAGGTGCTTCAGGTTTGGGAGAACAACTTCACGTTCGAGCTGCCGGAGAATCTCGGCCGGAACGGAAGGCTCAAGGACCTCGATATCACCGGAAACCACATCACCGGGTTGATTCCTCGGGATTTGTGCAAAGGAGGGCAGTTGAAGACGGCGATCCTGATGGATAACCACTTCTTCGGCCCCATTCCTGAGGAACTCGGCCGGTGCAAATCGCTCGTCAAAATTCGAATGATGAAAAACACTCTCACTGGAACTATTCCTGCTGGCATTTTCAGTTTGCCTAATGTAAGTATGATCGAGCTCAATGATAACTACTTGTCTGGCCAACTTCCAGAGCAAATGTCTGGGGGCTTACTTGGAATTCTCACTCTTTCTCGGAATCGGATTTCCGGGAAAATCCCGCCGGCGATTGGAAATCTCAAGAGTTTGCAAACTCTTTCCTTGGAGATGAACAGATTTTCGGGTGAAATTCCGACGGAGATATTTGATCTGAAGTCGTTGTCGAAGATCAACATCAGCGCCAACAACCTCAGCAGTGAAATACCGGCTTCAATTTCTCAGTGTTCCTCTCTAGCCTTGGCTGATCTTAGTCGAAACAATCTGATTGGGGAAATTCCGAGAGACATCTACAAGCTGAGAGTCCTGAGCATTCTCAATTTGTCTAGCAACCAACTCACGGGCGAAATTCCCAATGAAATTCGCAATATGACCAGCCTCACAACGCTTGATCTCTCCGATAACAACTTCATCGGCAAAATCCCAACCGGCGGTCAGTTTATGGTCTTCAACGACACGTCGTTTGCTGGAAACCCTTATCTCTGTTCCCCGCAGCGCCACGTCCAGTGCCCGTCGTTTCCACACCACAAGGCGTTTGGTTCGTCCAGGATCGCTCTTGTCGTAATTGGACTCGCTACGGTTCTGCTATTCTTGTTTATCACCGTGTATAGAATGAGAAGGAGAGAGATGCATAAATCTAGGGCTTGGAGGCTCACCGCCTTCCAACGGCTCGATTTCAAGGCCGAGGACGTGCTGGAGTGTTTGAAGGAAGAGAACATCATAGGCAAAGGCGGTGCTGGGATTGTGTACCGCGGGTCCATGCCAGACGGCGTTGACGTGGCAATCAAACGGCTAGTGGGGCGGGGCACCGGACGTAACTGTAACGATCACGGTTTTTCGGCGGAAATAAAAACGCTGGGACGAATCAGGCACCGAAATATCGTGAGGCTGTTGGGGTACGTGTCGAACAAGGACACGAATTTGCTGTTGTACGAGTACATGCCAAATGGGAGCCTGGGGGAGCTGTTGCATGGGTCAAAGGGAGGGCATTTGCAGTGGGAGAGGAGGTACAGGATCGCTGTGGAGGCAGCCAAGGGATTGTGTTACCTCCACCATGACTGCTCACCTCTGATTATACACAGGGATGTCAAGTCCAATAACATCTTGCTGGACTCTGACTTGGAGGCCCATGTTGCCGATTTTGGGCTCGCTAAGTTCTTGCAAGATGCTGGTGCTTCCGAGTGCATGTCTTCCATTGCTGGTTCCTATGGCTACATAGCCCCAGAGTATGCTTACACACTGAAAGTGGACGAGAAAAGCGACGTGTACAGTTTCGGTGTGGTTCTGCTGGAGCTAATAGCCGGGAGGAAGCCGGTGGGTGAATTTGGAGACGGGGTGGATATAGTAAGGTGGGTGAGGAAAACAACATCAGAACTGTCGCAGCCGTCGGATGCCGCATCAGTACTGGCAGTGGTGGATGCAAGGCTGTGTGGGTACCCACTGGCAGGGGTGATACACTTGTTCAAGATTGCCATGATGTGCGTGGAGGATGAGAGCTCCGCAAGACCTACAATGAGGGAAGTGGTTCACATGCTCACTAATCCGCCACGCTCTGCTCCAAGCCTTCTCAACCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

978

Amino Acids

107.32

Weight (kDa)

7.78

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	140
Acc36I	ACCTGC	1 cut(s)	724
Acc65I	GGTACC	1 cut(s)	2790
AccB1I	GGYRCC	4 cut(s)	767, 2162, 2226, 2790
AccBSI	CCGCTC	1 cut(s)	362
AccII	CGCG	2 cut(s)	210, 2109
AccIII	TCCGGA	2 cut(s)	191, 850
AclWI	GGATC	5 cut(s)	724, 894, 1168, 1913, 2378
AcoI	YGGCCR	5 cut(s)	348, 747, 1075, 1219, 1342
AcuI	CTGAAG	4 cut(s)	379, 959, 1013, 1532
AcyI	GRCGYC	1 cut(s)	453
AflIII	ACRYGT	3 cut(s)	1812, 2256, 2619
AjiI	CACGTC	5 cut(s)	1815, 1858, 2047, 2134, 2620
AjnI	CCWGG	3 cut(s)	992, 1901, 2310
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
Alw21I	GWGCWC	5 cut(s)	62, 441, 728, 1323, 2855
Alw26I	GTCTC	6 cut(s)	171, 241, 309, 836, 1635, 2679
AlwI	GGATC	5 cut(s)	724, 894, 1168, 1913, 2378
AlwNI	CAGNNNCTG	2 cut(s)	18, 250
Ama87I	CYCGRG	2 cut(s)	140, 1137
Aor13HI	TCCGGA	2 cut(s)	191, 850
ApeKI	GCWGC	5 cut(s)	18, 1060, 1849, 2384, 2737
ArsI	GACNNNNNNTTYG	4 cut(s)	1221, 1253, 1802, 1834
Asp700I	GAANNNNTTC	3 cut(s)	539, 1046, 2880
Asp718I	GGTACC	1 cut(s)	2790
AspLEI	GCGC	2 cut(s)	1541, 1854
AspS9I	GGNCC	7 cut(s)	122, 736, 983, 1096, 1199, 2112, 2482
AsuC2I	CCSGG	5 cut(s)	411, 629, 1126, 1411, 2659
AsuII	TTCGAA	1 cut(s)	1246
AvaI	CYCGRG	2 cut(s)	140, 1137
AvaII	GGWCC	4 cut(s)	122, 736, 1096, 2112
AxyI	CCTNAGG	1 cut(s)	1209
BaeGI	GKGCMC	3 cut(s)	479, 1868, 2165
BaeI	ACNNNNGTAYC	2 cut(s)	2801, 2834
BalI	TGGCCA	3 cut(s)	350, 749, 1344
BanI	GGYRCC	4 cut(s)	767, 2162, 2226, 2790
BanII	GRGCYC	6 cut(s)	282, 441, 728, 1323, 2505, 2855
BbsI	GAAGAC	4 cut(s)	385, 1172, 1795, 2538
Bbv12I	GWGCWC	5 cut(s)	62, 441, 728, 1323, 2855
BbvCI	CCTCAGC	2 cut(s)	761, 1550
BbvI	GCAGC	5 cut(s)	5, 1047, 1861, 2396, 2749
BccI	CCATC	3 cut(s)	340, 902, 1174
BceAI	ACGGC	8 cut(s)	619, 709, 997, 1185, 2039, 2140, 2162, 2725
BcgI	CGANNNNNNTGC	2 cut(s)	1216, 1250
BciT130I	CCWGG	3 cut(s)	994, 1903, 2312
BciVI	GTATCC	1 cut(s)	68
BcnI	CCSGG	5 cut(s)	411, 629, 1126, 1411, 2659
BcoDI	GTCTC	6 cut(s)	171, 241, 309, 836, 1635, 2679
BfaI	CTAG	5 cut(s)	527, 1592, 1683, 1995, 2150
BfmI	CTRYAG	1 cut(s)	731
BfoI	RGCGCY	2 cut(s)	1542, 1855
BfuAI	ACCTGC	1 cut(s)	724
BfuI	GTATCC	1 cut(s)	68
BglI	GCCNNNNNGGC	1 cut(s)	603
BlpI	GCTNAGC	1 cut(s)	61
BmcAI	AGTACT	1 cut(s)	2760
Bme1390I	CCNGG	8 cut(s)	411, 629, 994, 1126, 1411, 1903, 2312, 2659
Bme18I	GGWCC	4 cut(s)	122, 736, 1096, 2112
BmeT110I	CYCGRG	2 cut(s)	140, 1137
BmgBI	CACGTC	5 cut(s)	1815, 1858, 2047, 2134, 2620
BmgT120I	GGNCC	7 cut(s)	122, 736, 983, 1096, 1199, 2112, 2482
BmrFI	CCNGG	8 cut(s)	411, 629, 994, 1126, 1411, 1903, 2312, 2659
BmsI	GCATC	6 cut(s)	564, 1974, 2512, 2737, 2762, 2764
BpiI	GAAGAC	4 cut(s)	385, 1172, 1795, 2538
BplI	GAGNNNNNCTC	2 cut(s)	625, 657
BpmI	CTGGAG	3 cut(s)	1040, 2072, 2666
Bpu10I	CCTNAGC	3 cut(s)	761, 1550, 1664
Bpu1102I	GCTNAGC	1 cut(s)	61
Bpu14I	TTCGAA	1 cut(s)	1246
BpuEI	CTTGAG	4 cut(s)	89, 641, 1076, 1424
BpuMI	CCSGG	5 cut(s)	411, 629, 1126, 1411, 2659
BsaAI	YACGTR	1 cut(s)	2257
BsaBI	GATNNNNATC	1 cut(s)	1532
BsaHI	GRCGYC	1 cut(s)	453
BsaJI	CCNNGG	9 cut(s)	409, 992, 1136, 1461, 1596, 2040, 2107, 2311, 2388
BsaWI	WCCGGW	6 cut(s)	191, 617, 850, 908, 1109, 2165
BsaXI	ACNNNNNCTCC	4 cut(s)	2348, 2378, 2676, 2706
Bse118I	RCCGGY	6 cut(s)	545, 1221, 1423, 1564, 1784, 2668
Bse1I	ACTGG	7 cut(s)	12, 152, 614, 1273, 1861, 2766, 2802
Bse21I	CCTNAGG	1 cut(s)	1209
Bse3DI	GCAATG	1 cut(s)	2550
Bse8I	GATNNNNATC	1 cut(s)	1532
BseAI	TCCGGA	2 cut(s)	191, 850
BseBI	CCWGG	3 cut(s)	994, 1903, 2312
BseDI	CCNNGG	9 cut(s)	409, 992, 1136, 1461, 1596, 2040, 2107, 2311, 2388
BseGI	GGATG	5 cut(s)	552, 2446, 2752, 2779, 2851
BseJI	GATNNNNATC	1 cut(s)	1532
BseMI	GCAATG	1 cut(s)	2550
BseNI	ACTGG	7 cut(s)	12, 152, 614, 1273, 1861, 2766, 2802
BseRI	GAGGAG	2 cut(s)	272, 2374
BseSI	GKGCMC	3 cut(s)	479, 1868, 2165
BseX3I	CGGCCG	2 cut(s)	1075, 1219
BseXI	GCAGC	5 cut(s)	5, 1047, 1861, 2396, 2749
BseYI	CCCAGC	2 cut(s)	2093, 2212
Bsh1236I	CGCG	2 cut(s)	210, 2109
Bsh1285I	CGRYCG	3 cut(s)	208, 1078, 1222
BshNI	GGYRCC	4 cut(s)	767, 2162, 2226, 2790
BsiEI	CGRYCG	3 cut(s)	208, 1078, 1222
BsiHKAI	GWGCWC	5 cut(s)	62, 441, 728, 1323, 2855
BsiHKCI	CYCGRG	2 cut(s)	140, 1137
BslFI	GGGAC	1 cut(s)	2229
BsmAI	GTCTC	6 cut(s)	171, 241, 309, 836, 1635, 2679
BsmBI	CGTCTC	3 cut(s)	241, 836, 2679
BsmFI	GGGAC	1 cut(s)	2229
BsmI	GAATGC	1 cut(s)	1668
BsoBI	CYCGRG	2 cut(s)	140, 1137
Bsp119I	TTCGAA	1 cut(s)	1246
Bsp13I	TCCGGA	2 cut(s)	191, 850
Bsp1407I	TGTACA	2 cut(s)	963, 2622
Bsp1720I	GCTNAGC	1 cut(s)	61
BspEI	TCCGGA	2 cut(s)	191, 850
BspFNI	CGCG	2 cut(s)	210, 2109
BspMAI	CTGCAG	1 cut(s)	735
BspMI	ACCTGC	1 cut(s)	724
BspPI	GGATC	5 cut(s)	724, 894, 1168, 1913, 2378
BspT104I	TTCGAA	1 cut(s)	1246
BspT107I	GGYRCC	4 cut(s)	767, 2162, 2226, 2790
BsrBI	CCGCTC	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	2550
BsrFI	RCCGGY	6 cut(s)	545, 1221, 1423, 1564, 1784, 2668
BsrGI	TGTACA	2 cut(s)	963, 2622
BsrI	ACTGG	7 cut(s)	12, 152, 614, 1273, 1861, 2766, 2802
BssAI	RCCGGY	6 cut(s)	545, 1221, 1423, 1564, 1784, 2668
BssECI	CCNNGG	9 cut(s)	409, 992, 1136, 1461, 1596, 2040, 2107, 2311, 2388
BssNI	GRCGYC	1 cut(s)	453
BssT1I	CCWWGG	3 cut(s)	1461, 1596, 2388
Bst2UI	CCWGG	3 cut(s)	994, 1903, 2312
Bst4CI	ACNGT	9 cut(s)	80, 96, 686, 1936, 1960, 2177, 2189, 2627, 2733
Bst6I	CTCTTC	2 cut(s)	267, 2061
BstACI	GRCGYC	1 cut(s)	453
BstAUI	TGTACA	2 cut(s)	963, 2622
BstBAI	YACGTR	1 cut(s)	2257
BstBI	TTCGAA	1 cut(s)	1246
BstC8I	GCNNGC	6 cut(s)	67, 634, 751, 1285, 1425, 2505
BstDSI	CCRYGG	1 cut(s)	2107
BstENI	CCTNNNNNAGG	1 cut(s)	252
BstF5I	GGATG	5 cut(s)	552, 2446, 2752, 2779, 2851
BstFNI	CGCG	2 cut(s)	210, 2109
BstH2I	RGCGCY	2 cut(s)	1542, 1855
BstHHI	GCGC	2 cut(s)	1541, 1854
BstMAI	GTCTC	6 cut(s)	171, 241, 309, 836, 1635, 2679
BstMCI	CGRYCG	3 cut(s)	208, 1078, 1222
BstMWI	GCNNNNNNNGC	9 cut(s)	15, 66, 340, 603, 638, 870, 2155, 2381, 2489
BstNI	CCWGG	3 cut(s)	994, 1903, 2312
BstNSI	RCATGY	3 cut(s)	2299, 2545, 2890
BstSCI	CCNGG	8 cut(s)	409, 627, 992, 1124, 1409, 1901, 2310, 2657
BstSFI	CTRYAG	1 cut(s)	731
BstSLI	GKGCMC	3 cut(s)	479, 1868, 2165
BstUI	CGCG	2 cut(s)	210, 2109
BstV1I	GCAGC	5 cut(s)	5, 1047, 1861, 2396, 2749
BstV2I	GAAGAC	4 cut(s)	385, 1172, 1795, 2538
BstX2I	RGATCY	1 cut(s)	886
BstYI	RGATCY	1 cut(s)	886
BstZI	CGGCCG	2 cut(s)	1075, 1219
Bsu36I	CCTNAGG	1 cut(s)	1209
BsuI	GTATCC	1 cut(s)	68
BtgI	CCRYGG	1 cut(s)	2107
BtrI	CACGTC	5 cut(s)	1815, 1858, 2047, 2134, 2620
BtsCI	GGATG	5 cut(s)	552, 2446, 2752, 2779, 2851
BtsI	GCAGTG	4 cut(s)	178, 1561, 2357, 2772
BveI	ACCTGC	1 cut(s)	724
Cac8I	GCNNGC	6 cut(s)	67, 634, 751, 1285, 1425, 2505
CaiI	CAGNNNCTG	2 cut(s)	18, 250
CfoI	GCGC	2 cut(s)	1541, 1854
Cfr10I	RCCGGY	6 cut(s)	545, 1221, 1423, 1564, 1784, 2668
Cfr13I	GGNCC	7 cut(s)	122, 736, 983, 1096, 1199, 2112, 2482
Cfr42I	CCGCGG	1 cut(s)	2110
CseI	GACGC	1 cut(s)	461
EaeI	YGGCCR	5 cut(s)	348, 747, 1075, 1219, 1342
EagI	CGGCCG	2 cut(s)	1075, 1219
Eam1104I	CTCTTC	2 cut(s)	267, 2061
EarI	CTCTTC	2 cut(s)	267, 2061
EciI	GGCGGA	7 cut(s)	87, 100, 255, 693, 711, 2213, 2889
Ecl136II	GAGCTC	4 cut(s)	439, 726, 1321, 2853
EclXI	CGGCCG	2 cut(s)	1075, 1219
Eco130I	CCWWGG	3 cut(s)	1461, 1596, 2388
Eco147I	AGGCCT	1 cut(s)	138
Eco24I	GRGCYC	6 cut(s)	282, 441, 728, 1323, 2505, 2855
Eco32I	GATATC	1 cut(s)	1105
Eco47I	GGWCC	4 cut(s)	122, 736, 1096, 2112
Eco52I	CGGCCG	2 cut(s)	1075, 1219
Eco53kI	GAGCTC	4 cut(s)	439, 726, 1321, 2853
Eco57I	CTGAAG	4 cut(s)	379, 959, 1013, 1532
Eco81I	CCTNAGG	1 cut(s)	1209
Eco88I	CYCGRG	2 cut(s)	140, 1137
EcoICRI	GAGCTC	4 cut(s)	439, 726, 1321, 2853
EcoNI	CCTNNNNNAGG	1 cut(s)	252
EcoO109I	RGGNCCY	2 cut(s)	736, 1096
EcoRI	GAATTC	2 cut(s)	699, 1380
EcoRII	CCWGG	3 cut(s)	992, 1901, 2310
EcoRV	GATATC	1 cut(s)	1105
EcoT14I	CCWWGG	3 cut(s)	1461, 1596, 2388
EcoT22I	ATGCAT	1 cut(s)	1989
EcoT38I	GRGCYC	6 cut(s)	282, 441, 728, 1323, 2505, 2855
ErhI	CCWWGG	3 cut(s)	1461, 1596, 2388
Esp3I	CGTCTC	3 cut(s)	241, 836, 2679
FaqI	GGGAC	1 cut(s)	2229
FauI	CCCGC	5 cut(s)	524, 1428, 1854, 2102, 2151
FokI	GGATG	5 cut(s)	539, 2453, 2759, 2786, 2858
FriOI	GRGCYC	6 cut(s)	282, 441, 728, 1323, 2505, 2855
FspBI	CTAG	5 cut(s)	527, 1592, 1683, 1995, 2150
GlaI	GCGC	2 cut(s)	1540, 1853
GsaI	CCCAGC	2 cut(s)	2097, 2216
GsuI	CTGGAG	3 cut(s)	1040, 2072, 2666
HaeII	RGCGCY	2 cut(s)	1542, 1855
HgaI	GACGC	1 cut(s)	461
HhaI	GCGC	2 cut(s)	1541, 1854
Hin1I	GRCGYC	1 cut(s)	453
Hin6I	GCGC	2 cut(s)	1539, 1852
HinP1I	GCGC	2 cut(s)	1539, 1852
HincII	GTYRAC	2 cut(s)	298, 2131
HindII	GTYRAC	2 cut(s)	298, 2131
HinfI	GANTC	9 cut(s)	25, 405, 1069, 1132, 1399, 1659, 1926, 2220, 2468
Hpy166II	GTNNAC	6 cut(s)	298, 2104, 2131, 2605, 2623, 2884
Hpy8I	GTNNAC	6 cut(s)	298, 2104, 2131, 2605, 2623, 2884
HpyAV	CCTTC	7 cut(s)	95, 196, 1080, 1968, 2026, 2056, 2930
HpyCH4III	ACNGT	9 cut(s)	80, 96, 686, 1936, 1960, 2177, 2189, 2627, 2733
HpyF10VI	GCNNNNNNNGC	9 cut(s)	15, 66, 340, 603, 638, 870, 2155, 2381, 2489
Hsp92I	GRCGYC	1 cut(s)	453
HspAI	GCGC	2 cut(s)	1539, 1852
Kpn2I	TCCGGA	2 cut(s)	191, 850
KpnI	GGTACC	1 cut(s)	2794
KroI	GCCGGC	1 cut(s)	1423
KroNI	GCCGGC	1 cut(s)	1425
KspI	CCGCGG	1 cut(s)	2110
Lsp1109I	GCAGC	5 cut(s)	5, 1047, 1861, 2396, 2749
LweI	GCATC	6 cut(s)	564, 1974, 2512, 2737, 2762, 2764
MaeI	CTAG	5 cut(s)	527, 1592, 1683, 1995, 2150
MaeIII	GTNAC	6 cut(s)	80, 686, 755, 2171, 2177, 2399
MbiI	CCGCTC	1 cut(s)	362
MflI	RGATCY	1 cut(s)	886
MlsI	TGGCCA	3 cut(s)	350, 749, 1344
MluNI	TGGCCA	3 cut(s)	350, 749, 1344
MlyI	GAGTC	3 cut(s)	1668, 1920, 2462
MmeI	TCCRAC	5 cut(s)	408, 547, 1517, 2044, 2724
Mox20I	TGGCCA	3 cut(s)	350, 749, 1344
Mph1103I	ATGCAT	1 cut(s)	1989
MreI	CGCCGGCG	1 cut(s)	1423
MroI	TCCGGA	2 cut(s)	191, 850
MroNI	GCCGGC	1 cut(s)	1423
MroXI	GAANNNNTTC	3 cut(s)	539, 1046, 2880
MscI	TGGCCA	3 cut(s)	350, 749, 1344
MseI	TTAA	1 cut(s)	681
MslI	CAYNNNNRTG	1 cut(s)	2439
Msp20I	TGGCCA	3 cut(s)	350, 749, 1344
MspA1I	CMGCKG	4 cut(s)	753, 765, 837, 2109
MspR9I	CCNGG	8 cut(s)	411, 629, 994, 1126, 1411, 1903, 2312, 2659
Mva1269I	GAATGC	1 cut(s)	1668
MvaI	CCWGG	3 cut(s)	994, 1903, 2312
MvnI	CGCG	2 cut(s)	210, 2109
MwoI	GCNNNNNNNGC	9 cut(s)	15, 66, 340, 603, 638, 870, 2155, 2381, 2489
NaeI	GCCGGC	1 cut(s)	1425
NciI	CCSGG	5 cut(s)	411, 629, 1126, 1411, 2659
NgoMIV	GCCGGC	1 cut(s)	1423
NmeAIII	GCCGAG	3 cut(s)	1053, 1197, 2065
NmuCI	GTSAC	1 cut(s)	80
NsiI	ATGCAT	1 cut(s)	1989
NspI	RCATGY	3 cut(s)	2299, 2545, 2890
NspV	TTCGAA	1 cut(s)	1246
PaeR7I	CTCGAG	1 cut(s)	140
PceI	AGGCCT	1 cut(s)	138
PcsI	WCGNNNNNNNCGW	3 cut(s)	1914, 2130, 2613
PctI	GAATGC	1 cut(s)	1668
PdiI	GCCGGC	1 cut(s)	1425
PdmI	GAANNNNTTC	3 cut(s)	539, 1046, 2880
PfeI	GAWTC	6 cut(s)	25, 405, 1069, 1132, 1399, 2220
PfoI	TCCNGGA	2 cut(s)	1409, 1901
PleI	GAGTC	3 cut(s)	1667, 1920, 2462
PpsI	GAGTC	3 cut(s)	1667, 1920, 2462
Ppu21I	YACGTR	1 cut(s)	2257
PpuMI	RGGWCCY	2 cut(s)	736, 1096
Psp124BI	GAGCTC	4 cut(s)	441, 728, 1323, 2855
Psp5II	RGGWCCY	2 cut(s)	736, 1096
Psp6I	CCWGG	3 cut(s)	992, 1901, 2310
PspFI	CCCAGC	2 cut(s)	2093, 2212
PspGI	CCWGG	3 cut(s)	992, 1901, 2310
PspPI	GGNCC	7 cut(s)	122, 736, 983, 1096, 1199, 2112, 2482
PspPPI	RGGWCCY	2 cut(s)	736, 1096
PspXI	VCTCGAGB	1 cut(s)	140
PsrI	GAACNNNNNNTAC	2 cut(s)	962, 994
PstI	CTGCAG	1 cut(s)	735
PstNI	CAGNNNCTG	2 cut(s)	18, 250
PsuI	RGATCY	1 cut(s)	886
PvuII	CAGCTG	1 cut(s)	753
RseI	CAYNNNNRTG	1 cut(s)	2439
SacI	GAGCTC	4 cut(s)	441, 728, 1323, 2855
SacII	CCGCGG	1 cut(s)	2110
SaqAI	TTAA	1 cut(s)	681
Sau96I	GGNCC	7 cut(s)	122, 736, 983, 1096, 1199, 2112, 2482
ScaI	AGTACT	1 cut(s)	2760
SchI	GAGTC	3 cut(s)	1668, 1920, 2462
ScrFI	CCNGG	8 cut(s)	411, 629, 994, 1126, 1411, 1903, 2312, 2659
SfaNI	GCATC	6 cut(s)	564, 1974, 2512, 2737, 2762, 2764
SfcI	CTRYAG	1 cut(s)	731
Sfr274I	CTCGAG	1 cut(s)	140
Sfr303I	CCGCGG	1 cut(s)	2110
SfuI	TTCGAA	1 cut(s)	1246
SgrAI	CRCCGGYG	1 cut(s)	1423
SgrBI	CCGCGG	1 cut(s)	2110
SinI	GGWCC	4 cut(s)	122, 736, 1096, 2112
SlaI	CTCGAG	1 cut(s)	140
SmiMI	CAYNNNNRTG	1 cut(s)	2439
SmlI	CTYRAG	5 cut(s)	104, 140, 656, 1091, 1439
SmoI	CTYRAG	5 cut(s)	104, 140, 656, 1091, 1439
SseBI	AGGCCT	1 cut(s)	138
SspMI	CTAG	5 cut(s)	527, 1592, 1683, 1995, 2150
SstI	GAGCTC	4 cut(s)	441, 728, 1323, 2855
StuI	AGGCCT	1 cut(s)	138
StyD4I	CCNGG	8 cut(s)	409, 627, 992, 1124, 1409, 1901, 2310, 2657
StyI	CCWWGG	3 cut(s)	1461, 1596, 2388
TaaI	ACNGT	9 cut(s)	80, 96, 686, 1936, 1960, 2177, 2189, 2627, 2733
TatI	WGTACW	4 cut(s)	963, 2292, 2622, 2758
TauI	GCSGC	5 cut(s)	72, 768, 840, 843, 2753
TfiI	GAWTC	6 cut(s)	25, 405, 1069, 1132, 1399, 2220
Tru1I	TTAA	1 cut(s)	681
Tru9I	TTAA	1 cut(s)	681
TseFI	GTSAC	1 cut(s)	80
TseI	GCWGC	5 cut(s)	18, 1060, 1849, 2384, 2737
Tsp45I	GTSAC	1 cut(s)	80
TspDTI	ATGAA	4 cut(s)	1268, 1484, 1728, 1756
TspGWI	ACGGA	3 cut(s)	449, 1098, 1511
VpaK11BI	GGWCC	4 cut(s)	122, 736, 1096, 2112
XagI	CCTNNNNNAGG	1 cut(s)	252
XceI	RCATGY	3 cut(s)	2299, 2545, 2890
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1889, 2836
XhoI	CTCGAG	1 cut(s)	140
XmnI	GAANNNNTTC	3 cut(s)	539, 1046, 2880
XspI	CTAG	5 cut(s)	527, 1592, 1683, 1995, 2150
ZrmI	AGTACT	1 cut(s)	2760
Zsp2I	ATGCAT	1 cut(s)	1989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.