RLG00000018445

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
29875796 .. 29879452
3657 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018445

Sequence Viewer

Length: 2829 bp
ATGATTGGAGACCAAGGTTCAAGGCTAGACGACTGGGAGCGCTCTTCCCACAACTACTGCTCCTTCTCTGGAGTTTCATGTGACCACCAATCAAGAGTTGTTGCTCTTAACGTGTCCAATTTGCTTATCAATGGCTCAATTCCGGCAGAGATTGGGTTTCTCAACAAGCTCGTCAACCTCACCCTTGTCGACAACAGCTTAACAGGGAGCCTTCCCCAGGAGATCGGCAACCTGACTTCTTTAAAGTTCTTGAACATCTCCAACAACGACTTCAAGCTTGAGGTTCTTGACATCTGTAATAACCAGTTCACTGGCCCACTTCCTGTTGAGCTCGTCAATCTCAAAATAGATGATCTTGGCGGGAACCAATTCACTGGAGAAATTCCCGGAAATTATTCAATGATACAAAGCTTAGAATATTTGGGCCTCAACGGTTTAGGGCTCACCGGAAAGTTTCAGGCCAGCTTGGCTTGGCTGAAGAATCTCAAGGAATTGCATGTTAGGTTCTATAACAATTTCGACGGTGGAATTCCACCTGAGTTGGGAACGATGGGGTCGTTGCAAGTGCTTGACATGGTCAGCTGTAACCTCAACGGCAGGATTCCGGTCAGTCTAGGCTTTTTGAAGAACTTACGCGTGTTGTTTTTACAGTTTAACAGTTTCAGTGGTTATATACCTCCAGAACTTTCAGGTATGATGAGTCTGACGGCTTTAGATCTCTCTTATAACGAACTCACCGGAGAAATACCAGAGAGTTTCTCAGAGCTCAAGAACCTTAGGCTTCTCACACTGTCTGGGAACAATCTCTACGGCCAGATACCCAACTTCATCGAAACTCTTGGCCGGAATGGAAAGCTCAAAGACCTCGATGTAAGAGGAAACCACCTTACCGGCCTGATTCCTCGCGATTTGTGCAGAGGAGGAATGTTGTCGGGGTTAGATCTGACGGATCATCACTTTTTTGGGCCGATTCCGGAGGAATTGGGCCGGTGCAAGTCGTTAGTCGAAATCAGATTGATGAGAAACACACTAAACGGGACTATCCCTGCTGGAATTTTCAGCTTACCTGATGTGAAAAGAATTGAGCTCGATGATAATTACTTGTCCGGAGAACTACCGAAGCAGATGTCAGGTGCCTCACTCAAAATCCTCTCTCTTTCCCGAAATCAGATGTCTGGAAAACTCCCATCCGCCATTGGAAATCTCCAGAATTTACAAACTCTTTCGCTGGAAATGAACAGATTATCCGGGCAGGTACCAGAGGAAATCTTCAATTTACAGTGGCTAGAGGAACTCAACATCAGCACCAACAATTTTAGTGGTGAAATTCCAGCTTCTATCTCTGGTTGTTCCTCACTACGGTCCCTAGATTTTAGTCAAAACAATTTTGTTGGGGAAATCCCAAGAGGGATAGGCAAACTGACAGCACTTGGCATTCTTAATTTCTCAACCAACAATTTTGGTGGTGAAATTCCAGCTTCTATCTCTGCTTGTTCCTCTCTATTGTCCCTAGATTTTAGTCAAAACAATTTTGTTGGGGAAATCCCAAGAGGGATAGACAAACTGACAGCACTTGGCATTCTTAATTTCTCAAGGAATAACCTGACAGGTCCAATTCCTGTGGAATTCAAACACATGTGGAGCCTCACAACTTTGGATCTCTCCTATAACAATTTCATTGGTAGTATCCCAACCGGAGGTCAGTTTTTAGCGTTGAACAACGCTTCATTTGATGGAAATCCACATTTGGGTTCGCCGACAAAAGTTTCACGTGCCTCCTTTAACCACCCACGGCCTGTATGGTCTGATCCCATCCTTGCTGGACTCACTGTAGGCTCTGGAGCTCTGCTACTCATGTTGCTTATAAGGATCCGGGTTTATAGGAAGAGAAAGATCAGAGAGATCGAGAAAAGTGGCTCTTGGAAGCTCACAGTTTTCCAAGTACAGATTGATCTCAATATAGAGGACATTCTCCAGTGTCTAAATGCAGAGAACATTATTGGCAGGGGCGGTGCTGGAGTTGTCTACAGGGGGACAATGCCAAACGGTGATGATGTCGCCATCAAAAGGTTGCAGAGGAATCAGGGATTTTCGGCTGAAATTAAGACTTTGGGACAAATCAAGCACCGGAATATAGTGTCGTTGTTGGGGTACATGTCGAAAAAGGACACTAATTTGTTGATGTATGAGTACATGCCTAATGGTAGCTTGGGGGAAATGTTGCATGGGTCTAATGGAGGGCATTTGGAGTGGGAAATGAGATACAAGATTGCCGTGGATGCAGCAGAGGGATTGTGTTATCTCCACCATGATTGCTCGCCTCTGATTATACACAGGGATGTAAAGTCCAATAACATCGTGCTGGACTCTAATTTTGAAGCTCATATTGCTGATTTCGGCCTTGCCAAGTACTTTCAAGGACCAACAGATTGCATGTCTTCGTTTGCCGGTACCTTTGGTTACATTGCCCCAGAGTACGGTAGCACAATGAAAGTGGATGAGAAAATCGATGTGTACAGCTTTGGTGTGGTTCTGCTGGAACTAGTAACAGGGAGGAAACCAGTGGTAGAACTGGTGGAAGAAGCTGTGAACATAGTAAGTTGGGTAAGAAAAACCACATCACAAATTCCTCAGCAATCTACTGCATCATCTGTACTCACAGTTGTGGACTCCAGGCTCAGTGGCTTCCCATTTGCGAGTGTCAAGCATGTGTTCAAGATAGCAATGATGTGTGTTGAGAATCACAGCTCTGCAAGACGAAAAATGAGAGAAGTTGTCTACTTCCTCACTAATCCTCCTTGTTCTGCTCCAGGCATGACAAACCCTTAG

Protein Analysis

943

Amino Acids

103.49

Weight (kDa)

6.1

Isoelectric Point (pI)

32.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 178 - 291 3e-06 Leucine-rich repeat region
LRR_8 PF13855 210 - 269 1.4e-08 Leucine rich repeat
LRR_14 PF23598 380 - 457 3.6e-08 Leucine-rich repeat region
LRR_8 PF13855 404 - 463 3.9e-06 Leucine rich repeat
LRR_14 PF23598 452 - 556 1.2e-06 Leucine-rich repeat region
Pkinase PF00069 663 - 881 4.8e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 663 - 926 8.4e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75820
fragaria_vesca FvH4_2g38230 FvH4_2g38230
malus_domestica MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 726, 1865
Acc36I ACCTGC 1 cut(s) 1243
Acc65I GGTACC 2 cut(s) 1255, 2450
AccB1I GGYRCC 3 cut(s) 1133, 1255, 2450
AccI GTMKAC 3 cut(s) 189, 2025, 2778
AccII CGCG 2 cut(s) 636, 906
AccIII TCCGGA 2 cut(s) 973, 1106
AciI CCGC 3 cut(s) 360, 1191, 2010
AclWI GGATC 5 cut(s) 957, 1665, 1802, 1864, 1877
AcoI YGGCCR 2 cut(s) 811, 841
AcsI RAATTY 8 cut(s) 381, 528, 1053, 1210, 1326, 1470, 1625, 2625
AcuI CTGAAG 1 cut(s) 497
AcvI CACGTG 1 cut(s) 1772
AfaI GTAC 9 cut(s) 1257, 1944, 2153, 2192, 2411, 2452, 2477, 2516, 2655
AfeI AGCGCT 1 cut(s) 41
AfiI CCNNNNNNNGG 7 cut(s) 217, 542, 1359, 1697, 1748, 2067, 2477
AflIII ACRYGT 4 cut(s) 111, 634, 1635, 2154
AhlI ACTAGT 1 cut(s) 2542
AjnI CCWGG 3 cut(s) 216, 2672, 2809
AjuI GAANNNNNNNTTGG 2 cut(s) 254, 286
AleI CACNNNNGTG 1 cut(s) 2663
AloI GAACNNNNNNTCC 2 cut(s) 1229, 1261
Alw21I GWGCWC 4 cut(s) 333, 768, 1089, 1846
Alw26I GTCTC 1 cut(s) 3
AlwI GGATC 5 cut(s) 957, 1665, 1802, 1864, 1877
Aor13HI TCCGGA 2 cut(s) 973, 1106
Aor51HI AGCGCT 1 cut(s) 41
ApeKI GCWGC 1 cut(s) 2282
ApoI RAATTY 8 cut(s) 381, 528, 1053, 1210, 1326, 1470, 1625, 2625
ArsI GACNNNNNNTTYG 4 cut(s) 1112, 1144, 2357, 2389
Asp700I GAANNNNTTC 2 cut(s) 368, 394
Asp718I GGTACC 2 cut(s) 1255, 2450
AspLEI GCGC 1 cut(s) 42
AspS9I GGNCC 7 cut(s) 314, 424, 965, 985, 1362, 1610, 2420
AsuC2I CCSGG 3 cut(s) 387, 1249, 1874
AsuHPI GGTGA 6 cut(s) 172, 436, 727, 1334, 1478, 2060
AvaII GGWCC 3 cut(s) 1362, 1610, 2420
AxyI CCTNAGG 1 cut(s) 776
BamHI GGATCC 1 cut(s) 1869
BanI GGYRCC 3 cut(s) 1133, 1255, 2450
BanII GRGCYC 5 cut(s) 333, 444, 768, 1089, 1846
BbrPI CACGTG 1 cut(s) 1772
BbsI GAAGAC 1 cut(s) 2430
Bbv12I GWGCWC 4 cut(s) 333, 768, 1089, 1846
BbvCI CCTCAGC 1 cut(s) 2631
BbvI GCAGC 1 cut(s) 2294
BccI CCATC 5 cut(s) 544, 1195, 1727, 1820, 2069
BceAI ACGGC 5 cut(s) 610, 723, 826, 1808, 2258
BciT130I CCWGG 3 cut(s) 218, 2674, 2811
BciVI GTATCC 1 cut(s) 1697
BcnI CCSGG 3 cut(s) 387, 1249, 1874
BcoDI GTCTC 1 cut(s) 3
BcuI ACTAGT 1 cut(s) 2542
BfaI CTAG 6 cut(s) 26, 614, 1286, 1367, 1511, 2543
BfmI CTRYAG 2 cut(s) 1830, 2026
BfoI RGCGCY 1 cut(s) 43
BfuAI ACCTGC 1 cut(s) 1243
BfuI GTATCC 1 cut(s) 1697
BglI GCCNNNNNGGC 1 cut(s) 467
BglII AGATCT 2 cut(s) 715, 940
BisI GCNGC 1 cut(s) 2283
BlsI GCNGC 1 cut(s) 2284
BmcAI AGTACT 1 cut(s) 2411
Bme1390I CCNGG 6 cut(s) 218, 387, 1249, 1874, 2674, 2811
Bme18I GGWCC 3 cut(s) 1362, 1610, 2420
BmgT120I GGNCC 7 cut(s) 314, 424, 965, 985, 1362, 1610, 2420
BmiI GGNNCC 8 cut(s) 209, 365, 1135, 1257, 1364, 1643, 1871, 2452
BmrFI CCNGG 6 cut(s) 218, 387, 1249, 1874, 2674, 2811
BmrI ACTGGG 1 cut(s) 43
BmsI GCATC 2 cut(s) 2269, 2654
BmuI ACTGGG 1 cut(s) 43
BpiI GAAGAC 1 cut(s) 2430
BplI GAGNNNNNCTC 2 cut(s) 743, 775
BpmI CTGGAG 9 cut(s) 90, 396, 663, 1190, 1860, 1958, 2037, 2656, 2793
Bpu10I CCTNAGC 1 cut(s) 2631
BpuEI CTTGAG 4 cut(s) 299, 470, 752, 1576
BpuMI CCSGG 3 cut(s) 387, 1249, 1874
Bsa29I ATCGAT 1 cut(s) 2508
BsaAI YACGTR 1 cut(s) 1772
BsaBI GATNNNNATC 1 cut(s) 1737
BsaI GGTCTC 1 cut(s) 3
BsaJI CCNNGG 4 cut(s) 13, 216, 1790, 2274
BsaWI WCCGGW 7 cut(s) 446, 604, 737, 973, 1106, 1694, 2127
BsaXI ACNNNNNCTCC 4 cut(s) 44, 74, 2779, 2809
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 542, 1359, 1697, 1748, 2067, 2477
Bse118I RCCGGY 3 cut(s) 890, 987, 2447
Bse1I ACTGG 7 cut(s) 38, 304, 316, 379, 1975, 2561, 2577
Bse21I CCTNAGG 1 cut(s) 776
Bse3DI GCAATG 2 cut(s) 2463, 2730
Bse8I GATNNNNATC 1 cut(s) 1737
BseAI TCCGGA 2 cut(s) 973, 1106
BseBI CCWGG 3 cut(s) 218, 2674, 2811
BseCI ATCGAT 1 cut(s) 2508
BseDI CCNNGG 4 cut(s) 13, 216, 1790, 2274
BseGI GGATG 5 cut(s) 1187, 1812, 2284, 2344, 2503
BseJI GATNNNNATC 1 cut(s) 1737
BseLI CCNNNNNNNGG 7 cut(s) 217, 542, 1359, 1697, 1748, 2067, 2477
BseMI GCAATG 2 cut(s) 2463, 2730
BseMII CTCAG 4 cut(s) 528, 774, 2645, 2692
BseNI ACTGG 7 cut(s) 38, 304, 316, 379, 1975, 2561, 2577
BseRI GAGGAG 1 cut(s) 933
BseXI GCAGC 1 cut(s) 2294
BsgI GTGCAG 1 cut(s) 934
Bsh1236I CGCG 2 cut(s) 636, 906
BshNI GGYRCC 3 cut(s) 1133, 1255, 2450
BshVI ATCGAT 1 cut(s) 2508
BsiHKAI GWGCWC 4 cut(s) 333, 768, 1089, 1846
BslFI GGGAC 5 cut(s) 1051, 1348, 1492, 2047, 2127
BslI CCNNNNNNNGG 7 cut(s) 217, 542, 1359, 1697, 1748, 2067, 2477
BsmAI GTCTC 1 cut(s) 3
BsmFI GGGAC 5 cut(s) 1051, 1348, 1492, 2047, 2127
BsmI GAATGC 2 cut(s) 1434, 1578
Bso31I GGTCTC 1 cut(s) 3
Bsp1286I GDGCHC 5 cut(s) 333, 444, 768, 1089, 1846
Bsp13I TCCGGA 2 cut(s) 973, 1106
Bsp1407I TGTACA 1 cut(s) 2514
Bsp68I TCGCGA 1 cut(s) 906
BspACI CCGC 3 cut(s) 360, 1191, 2010
BspCNI CTCAG 4 cut(s) 529, 773, 2644, 2691
BspDI ATCGAT 1 cut(s) 2508
BspEI TCCGGA 2 cut(s) 973, 1106
BspFNI CGCG 2 cut(s) 636, 906
BspLI GGNNCC 8 cut(s) 209, 365, 1135, 1257, 1364, 1643, 1871, 2452
BspMI ACCTGC 1 cut(s) 1243
BspPI GGATC 5 cut(s) 957, 1665, 1802, 1864, 1877
BspQI GCTCTTC 1 cut(s) 49
BspT107I GGYRCC 3 cut(s) 1133, 1255, 2450
BspTNI GGTCTC 1 cut(s) 3
BsrDI GCAATG 2 cut(s) 2463, 2730
BsrFI RCCGGY 3 cut(s) 890, 987, 2447
BsrGI TGTACA 1 cut(s) 2514
BsrI ACTGG 7 cut(s) 38, 304, 316, 379, 1975, 2561, 2577
BssAI RCCGGY 3 cut(s) 890, 987, 2447
BssECI CCNNGG 4 cut(s) 13, 216, 1790, 2274
BssT1I CCWWGG 1 cut(s) 13
Bst2UI CCWGG 3 cut(s) 218, 2674, 2811
Bst6I CTCTTC 2 cut(s) 49, 1880
BstAUI TGTACA 1 cut(s) 2514
BstBAI YACGTR 1 cut(s) 1772
BstC8I GCNNGC 2 cut(s) 463, 2318
BstDEI CTNAG 7 cut(s) 412, 537, 760, 776, 2631, 2678, 2826
BstDSI CCRYGG 2 cut(s) 1790, 2274
BstENI CCTNNNNNAGG 1 cut(s) 215
BstF5I GGATG 5 cut(s) 1187, 1812, 2284, 2344, 2503
BstFNI CGCG 2 cut(s) 636, 906
BstH2I RGCGCY 1 cut(s) 43
BstHHI GCGC 1 cut(s) 42
BstMAI GTCTC 1 cut(s) 3
BstMWI GCNNNNNNNGC 4 cut(s) 467, 912, 2279, 2387
BstNI CCWGG 3 cut(s) 218, 2674, 2811
BstNSI RCATGY 6 cut(s) 500, 1639, 2158, 2197, 2437, 2711
BstSCI CCNGG 6 cut(s) 216, 385, 1247, 1872, 2672, 2809
BstSFI CTRYAG 2 cut(s) 1830, 2026
BstUI CGCG 2 cut(s) 636, 906
BstV1I GCAGC 1 cut(s) 2294
BstV2I GAAGAC 1 cut(s) 2430
BstX2I RGATCY 4 cut(s) 715, 940, 1657, 1869
BstXI CCANNNNNNTGG 2 cut(s) 311, 374
BstYI RGATCY 4 cut(s) 715, 940, 1657, 1869
Bsu15I ATCGAT 1 cut(s) 2508
Bsu36I CCTNAGG 1 cut(s) 776
BsuI GTATCC 1 cut(s) 1697
BsuTUI ATCGAT 1 cut(s) 2508
BtgI CCRYGG 2 cut(s) 1790, 2274
BtsCI GGATG 5 cut(s) 1187, 1812, 2284, 2344, 2503
BtsIMutI CAGTG 9 cut(s) 309, 372, 670, 788, 1286, 1827, 1982, 2568, 2686
BtuMI TCGCGA 1 cut(s) 906
BveI ACCTGC 1 cut(s) 1243
Cac8I GCNNGC 2 cut(s) 463, 2318
CfoI GCGC 1 cut(s) 42
Cfr10I RCCGGY 3 cut(s) 890, 987, 2447
Cfr13I GGNCC 7 cut(s) 314, 424, 965, 985, 1362, 1610, 2420
ClaI ATCGAT 1 cut(s) 2508
Csp6I GTAC 9 cut(s) 1256, 1943, 2152, 2191, 2410, 2451, 2476, 2515, 2654
CviQI GTAC 9 cut(s) 1256, 1943, 2152, 2191, 2410, 2451, 2476, 2515, 2654
DdeI CTNAG 7 cut(s) 412, 537, 760, 776, 2631, 2678, 2826
DraI TTTAAA 1 cut(s) 243
EaeI YGGCCR 2 cut(s) 811, 841
Eam1104I CTCTTC 2 cut(s) 49, 1880
EarI CTCTTC 2 cut(s) 49, 1880
EciI GGCGGA 1 cut(s) 1180
Ecl136II GAGCTC 4 cut(s) 331, 766, 1087, 1844
Eco130I CCWWGG 1 cut(s) 13
Eco24I GRGCYC 5 cut(s) 333, 444, 768, 1089, 1846
Eco31I GGTCTC 1 cut(s) 3
Eco47I GGWCC 3 cut(s) 1362, 1610, 2420
Eco47III AGCGCT 1 cut(s) 41
Eco53kI GAGCTC 4 cut(s) 331, 766, 1087, 1844
Eco57I CTGAAG 1 cut(s) 497
Eco72I CACGTG 1 cut(s) 1772
Eco81I CCTNAGG 1 cut(s) 776
EcoICRI GAGCTC 4 cut(s) 331, 766, 1087, 1844
EcoNI CCTNNNNNAGG 1 cut(s) 215
EcoRI GAATTC 2 cut(s) 528, 1625
EcoRII CCWGG 3 cut(s) 216, 2672, 2809
EcoT14I CCWWGG 1 cut(s) 13
EcoT38I GRGCYC 5 cut(s) 333, 444, 768, 1089, 1846
ErhI CCWWGG 1 cut(s) 13
FalI AAGNNNNNCTT 2 cut(s) 1903, 1935
FaqI GGGAC 5 cut(s) 1051, 1348, 1492, 2047, 2127
FauI CCCGC 1 cut(s) 353
FblI GTMKAC 3 cut(s) 189, 2025, 2778
Fnu4HI GCNGC 1 cut(s) 2283
FokI GGATG 5 cut(s) 1174, 1799, 2291, 2351, 2510
FriOI GRGCYC 5 cut(s) 333, 444, 768, 1089, 1846
Fsp4HI GCNGC 1 cut(s) 2283
FspBI CTAG 6 cut(s) 26, 614, 1286, 1367, 1511, 2543
GlaI GCGC 1 cut(s) 41
GluI GCNGC 1 cut(s) 2283
GsuI CTGGAG 9 cut(s) 90, 396, 663, 1190, 1860, 1958, 2037, 2656, 2793
HaeII RGCGCY 1 cut(s) 43
HhaI GCGC 1 cut(s) 42
Hin6I GCGC 1 cut(s) 40
HinP1I GCGC 1 cut(s) 40
HincII GTYRAC 2 cut(s) 175, 190
HindII GTYRAC 2 cut(s) 175, 190
HindIII AAGCTT 2 cut(s) 275, 409
HphI GGTGA 6 cut(s) 172, 436, 727, 1334, 1478, 2060
Hpy166II GTNNAC 8 cut(s) 175, 190, 309, 2026, 2515, 2590, 2668, 2779
Hpy188I TCNGA 8 cut(s) 705, 763, 945, 1013, 1170, 1807, 1898, 2325
Hpy8I GTNNAC 8 cut(s) 175, 190, 309, 2026, 2515, 2590, 2668, 2779
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 2 cut(s) 73, 221
HpyCH4IV ACGT 2 cut(s) 111, 1771
HpyF10VI GCNNNNNNNGC 4 cut(s) 467, 912, 2279, 2387
HpyF3I CTNAG 7 cut(s) 412, 537, 760, 776, 2631, 2678, 2826
HpySE526I ACGT 2 cut(s) 111, 1771
HspAI GCGC 1 cut(s) 40
Kpn2I TCCGGA 2 cut(s) 973, 1106
KpnI GGTACC 2 cut(s) 1259, 2454
LguI GCTCTTC 1 cut(s) 49
LmnI GCTCC 6 cut(s) 37, 65, 207, 1641, 1841, 2812
Lsp1109I GCAGC 1 cut(s) 2294
LweI GCATC 2 cut(s) 2269, 2654
MaeI CTAG 6 cut(s) 26, 614, 1286, 1367, 1511, 2543
MaeII ACGT 2 cut(s) 111, 1771
MaeIII GTNAC 4 cut(s) 80, 584, 2459, 2545
MboII GAAGA 7 cut(s) 36, 490, 637, 1261, 1897, 2430, 2591
MflI RGATCY 4 cut(s) 715, 940, 1657, 1869
MhlI GDGCHC 5 cut(s) 333, 444, 768, 1089, 1846
MluI ACGCGT 1 cut(s) 634
MlyI GAGTC 4 cut(s) 709, 1818, 2360, 2663
MmeI TCCRAC 1 cut(s) 285
MroI TCCGGA 2 cut(s) 973, 1106
MroXI GAANNNNTTC 2 cut(s) 368, 394
MseI TTAA 8 cut(s) 108, 200, 242, 654, 1440, 1584, 1782, 2103
MslI CAYNNNNRTG 2 cut(s) 2337, 2663
MspA1I CMGCKG 1 cut(s) 582
MspR9I CCNGG 6 cut(s) 218, 387, 1249, 1874, 2674, 2811
Mva1269I GAATGC 2 cut(s) 1434, 1578
MvaI CCWGG 3 cut(s) 218, 2674, 2811
MvnI CGCG 2 cut(s) 636, 906
MwoI GCNNNNNNNGC 4 cut(s) 467, 912, 2279, 2387
NciI CCSGG 3 cut(s) 387, 1249, 1874
NlaIV GGNNCC 8 cut(s) 209, 365, 1135, 1257, 1364, 1643, 1871, 2452
NmuCI GTSAC 1 cut(s) 80
NruI TCGCGA 1 cut(s) 906
NspI RCATGY 6 cut(s) 500, 1639, 2158, 2197, 2437, 2711
OliI CACNNNNGTG 1 cut(s) 2663
PciI ACATGT 2 cut(s) 1635, 2154
PciSI GCTCTTC 1 cut(s) 49
PcsI WCGNNNNNNNCGW 1 cut(s) 554
PctI GAATGC 2 cut(s) 1434, 1578
PdmI GAANNNNTTC 2 cut(s) 368, 394
PfeI GAWTC 6 cut(s) 481, 601, 898, 970, 2080, 2740
PflFI GACNNNGTC 1 cut(s) 575
PfoI TCCNGGA 1 cut(s) 385
PkrI GCNGC 1 cut(s) 2284
PleI GAGTC 4 cut(s) 708, 1818, 2360, 2663
PmaCI CACGTG 1 cut(s) 1772
PmlI CACGTG 1 cut(s) 1772
PpsI GAGTC 4 cut(s) 708, 1818, 2360, 2663
Ppu21I YACGTR 1 cut(s) 1772
PscI ACATGT 2 cut(s) 1635, 2154
PsiI TTATAA 2 cut(s) 726, 1865
Psp124BI GAGCTC 4 cut(s) 333, 768, 1089, 1846
Psp6I CCWGG 3 cut(s) 216, 2672, 2809
PspCI CACGTG 1 cut(s) 1772
PspGI CCWGG 3 cut(s) 216, 2672, 2809
PspN4I GGNNCC 8 cut(s) 209, 365, 1135, 1257, 1364, 1643, 1871, 2452
PspPI GGNCC 7 cut(s) 314, 424, 965, 985, 1362, 1610, 2420
PsrI GAACNNNNNNTAC 2 cut(s) 791, 823
PsuI RGATCY 4 cut(s) 715, 940, 1657, 1869
PsyI GACNNNGTC 1 cut(s) 575
PvuII CAGCTG 1 cut(s) 582
RruI TCGCGA 1 cut(s) 906
RsaI GTAC 9 cut(s) 1257, 1944, 2153, 2192, 2411, 2452, 2477, 2516, 2655
RsaNI GTAC 9 cut(s) 1256, 1943, 2152, 2191, 2410, 2451, 2476, 2515, 2654
RseI CAYNNNNRTG 2 cut(s) 2337, 2663
SacI GAGCTC 4 cut(s) 333, 768, 1089, 1846
SalI GTCGAC 1 cut(s) 188
SapI GCTCTTC 1 cut(s) 49
SaqAI TTAA 8 cut(s) 108, 200, 242, 654, 1440, 1584, 1782, 2103
SatI GCNGC 1 cut(s) 2283
Sau96I GGNCC 7 cut(s) 314, 424, 965, 985, 1362, 1610, 2420
ScaI AGTACT 1 cut(s) 2411
SchI GAGTC 4 cut(s) 709, 1818, 2360, 2663
ScrFI CCNGG 6 cut(s) 218, 387, 1249, 1874, 2674, 2811
SduI GDGCHC 5 cut(s) 333, 444, 768, 1089, 1846
SfaNI GCATC 2 cut(s) 2269, 2654
SfcI CTRYAG 2 cut(s) 1830, 2026
SinI GGWCC 3 cut(s) 1362, 1610, 2420
SmiMI CAYNNNNRTG 2 cut(s) 2337, 2663
SmlI CTYRAG 4 cut(s) 278, 485, 767, 1591
SmoI CTYRAG 4 cut(s) 278, 485, 767, 1591
SpeI ACTAGT 1 cut(s) 2542
SsiI CCGC 3 cut(s) 360, 1191, 2010
SspI AATATT 1 cut(s) 419
SspMI CTAG 6 cut(s) 26, 614, 1286, 1367, 1511, 2543
SstI GAGCTC 4 cut(s) 333, 768, 1089, 1846
StyD4I CCNGG 6 cut(s) 216, 385, 1247, 1872, 2672, 2809
StyI CCWWGG 1 cut(s) 13
TaiI ACGT 2 cut(s) 114, 1774
TaqI TCGA 9 cut(s) 189, 519, 831, 867, 1005, 1089, 1905, 2159, 2508
TatI WGTACW 5 cut(s) 1942, 2190, 2409, 2514, 2653
TfiI GAWTC 6 cut(s) 481, 601, 898, 970, 2080, 2740
Tru1I TTAA 8 cut(s) 108, 200, 242, 654, 1440, 1584, 1782, 2103
Tru9I TTAA 8 cut(s) 108, 200, 242, 654, 1440, 1584, 1782, 2103
TscAI CASTG 9 cut(s) 316, 379, 670, 795, 1286, 1834, 1982, 2568, 2686
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 1 cut(s) 2282
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 6 cut(s) 66, 817, 1250, 1666, 1716, 2504
TspGWI ACGGA 1 cut(s) 962
TspRI CASTG 9 cut(s) 316, 379, 670, 795, 1286, 1834, 1982, 2568, 2686
Tth111I GACNNNGTC 1 cut(s) 575
VpaK11BI GGWCC 3 cut(s) 1362, 1610, 2420
XagI CCTNNNNNAGG 1 cut(s) 215
XapI RAATTY 8 cut(s) 381, 528, 1053, 1210, 1326, 1470, 1625, 2625
XceI RCATGY 6 cut(s) 500, 1639, 2158, 2197, 2437, 2711
XcmI CCANNNNNNNNNTGG 1 cut(s) 1797
XmiI GTMKAC 3 cut(s) 189, 2025, 2778
XmnI GAANNNNTTC 2 cut(s) 368, 394
XspI CTAG 6 cut(s) 26, 614, 1286, 1367, 1511, 2543
ZrmI AGTACT 1 cut(s) 2411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.