Rh2AG277700

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
33357139 .. 33357513
375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG277700.1

Sequence Viewer

Length: 375 bp
ATGAAAGTGGATGAGAAAATCGATGTATACAGCTTTGGTGTGGTTCTACTGGAACTAGTAACAGGGAGGAAACCAGTGGTAGAACTAGAGGAAGAAGCTGTGAACATAGTAAGTTGGGTAAGAAAAACCGCATCACAAATTCCTCAGCAATCCACTGCATCATCTGTACTCAAAGTTGTGGACTCCAGGCTCAGTGGGTTCCCATTTGCAAGTGTCGAGCATGTGTTCAAGATAGCAATGATGTGTGTCGAGAATCACAGCTCTGCAAGACCAACAATGAGGGAAGTTGTCTACTTCCTCACTAATCCTCCTTGTTCTGCTCCAGGCATGACAATTGACAAACCCTTAAGAGATGTTGTTTGCCATGCTCATTAA

Protein Analysis

124

Amino Acids

13.76

Weight (kDa)

6.41

Isoelectric Point (pI)

28.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 2 - 98 5.2e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75820
fragaria_vesca FvH4_2g38230 FvH4_2g38230
malus_domestica MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 27, 291
AciI CCGC 1 cut(s) 129
AcsI RAATTY 1 cut(s) 138
AfaI GTAC 1 cut(s) 168
AflII CTTAAG 1 cut(s) 346
AgsI TTSAA 1 cut(s) 229
AhlI ACTAGT 1 cut(s) 55
AjnI CCWGG 2 cut(s) 185, 322
AluBI AGCT 3 cut(s) 33, 98, 261
AluI AGCT 3 cut(s) 33, 98, 261
ApoI RAATTY 1 cut(s) 138
BbvCI CCTCAGC 1 cut(s) 144
BciT130I CCWGG 2 cut(s) 187, 324
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 2 cut(s) 56, 86
BfrI CTTAAG 1 cut(s) 346
Bme1390I CCNGG 2 cut(s) 187, 324
BmiI GGNNCC 1 cut(s) 200
BmrFI CCNGG 2 cut(s) 187, 324
BmsI GCATC 2 cut(s) 140, 167
BpmI CTGGAG 2 cut(s) 169, 306
Bpu10I CCTNAGC 1 cut(s) 144
Bsa29I ATCGAT 1 cut(s) 21
BsaXI ACNNNNNCTCC 2 cut(s) 292, 322
Bse1I ACTGG 2 cut(s) 54, 74
Bse3DI GCAATG 1 cut(s) 243
BseBI CCWGG 2 cut(s) 187, 324
BseCI ATCGAT 1 cut(s) 21
BseGI GGATG 1 cut(s) 16
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 2 cut(s) 158, 205
BseNI ACTGG 2 cut(s) 54, 74
BshVI ATCGAT 1 cut(s) 21
BspACI CCGC 1 cut(s) 129
BspCNI CTCAG 2 cut(s) 157, 204
BspDI ATCGAT 1 cut(s) 21
BspLI GGNNCC 1 cut(s) 200
BspTI CTTAAG 1 cut(s) 346
BsrDI GCAATG 1 cut(s) 243
BsrI ACTGG 2 cut(s) 54, 74
BssNAI GTATAC 1 cut(s) 28
Bst1107I GTATAC 1 cut(s) 28
Bst2UI CCWGG 2 cut(s) 187, 324
BstAFI CTTAAG 1 cut(s) 346
BstDEI CTNAG 2 cut(s) 144, 191
BstF5I GGATG 1 cut(s) 16
BstNI CCWGG 2 cut(s) 187, 324
BstNSI RCATGY 1 cut(s) 224
BstSCI CCNGG 2 cut(s) 185, 322
BstZ17I GTATAC 1 cut(s) 28
Bsu15I ATCGAT 1 cut(s) 21
BsuTUI ATCGAT 1 cut(s) 21
BtsCI GGATG 1 cut(s) 16
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 3 cut(s) 81, 153, 199
ClaI ATCGAT 1 cut(s) 21
Csp6I GTAC 1 cut(s) 167
CviAII CATG 3 cut(s) 221, 328, 365
CviJI RGCY 4 cut(s) 33, 98, 190, 261
CviKI_1 RGCY 4 cut(s) 33, 98, 190, 261
CviQI GTAC 1 cut(s) 167
DdeI CTNAG 2 cut(s) 144, 191
EcoRII CCWGG 2 cut(s) 185, 322
FaeI CATG 3 cut(s) 224, 331, 368
FaiI YATR 5 cut(s) 28, 107, 222, 329, 366
FatI CATG 3 cut(s) 220, 327, 364
FblI GTMKAC 2 cut(s) 27, 291
FokI GGATG 1 cut(s) 23
FspBI CTAG 2 cut(s) 56, 86
GsuI CTGGAG 2 cut(s) 169, 306
Hin1II CATG 3 cut(s) 224, 331, 368
HinfI GANTC 2 cut(s) 182, 253
Hpy166II GTNNAC 4 cut(s) 28, 103, 181, 292
Hpy188III TCNNGA 2 cut(s) 229, 250
Hpy8I GTNNAC 4 cut(s) 28, 103, 181, 292
HpyCH4V TGCA 3 cut(s) 158, 209, 266
HpyF3I CTNAG 2 cut(s) 144, 191
Hsp92II CATG 3 cut(s) 224, 331, 368
LmnI GCTCC 1 cut(s) 325
LpnPI CCDG 7 cut(s) 35, 48, 87, 172, 199, 309, 336
LweI GCATC 2 cut(s) 140, 167
MaeI CTAG 2 cut(s) 56, 86
MaeIII GTNAC 1 cut(s) 58
MboII GAAGA 1 cut(s) 104
MfeI CAATTG 1 cut(s) 333
MluCI AATT 2 cut(s) 138, 333
MlyI GAGTC 1 cut(s) 176
MnlI CCTC 6 cut(s) 60, 82, 153, 273, 308, 318
MseI TTAA 2 cut(s) 347, 373
MspCI CTTAAG 1 cut(s) 346
MspR9I CCNGG 2 cut(s) 187, 324
MunI CAATTG 1 cut(s) 333
MvaI CCWGG 2 cut(s) 187, 324
NlaIII CATG 3 cut(s) 224, 331, 368
NlaIV GGNNCC 1 cut(s) 200
NspI RCATGY 1 cut(s) 224
PfeI GAWTC 1 cut(s) 253
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
Psp6I CCWGG 2 cut(s) 185, 322
PspGI CCWGG 2 cut(s) 185, 322
PspN4I GGNNCC 1 cut(s) 200
RsaI GTAC 1 cut(s) 168
RsaNI GTAC 1 cut(s) 167
SaqAI TTAA 2 cut(s) 347, 373
SchI GAGTC 1 cut(s) 176
ScrFI CCNGG 2 cut(s) 187, 324
SetI ASST 3 cut(s) 35, 100, 263
SfaNI GCATC 2 cut(s) 140, 167
SmlI CTYRAG 1 cut(s) 346
SmoI CTYRAG 1 cut(s) 346
SpeI ACTAGT 1 cut(s) 55
Sse9I AATT 2 cut(s) 138, 333
SsiI CCGC 1 cut(s) 129
SspMI CTAG 2 cut(s) 56, 86
StyD4I CCNGG 2 cut(s) 185, 322
TaqI TCGA 3 cut(s) 21, 216, 249
TasI AATT 2 cut(s) 138, 333
TatI WGTACW 1 cut(s) 166
TfiI GAWTC 1 cut(s) 253
Tru1I TTAA 2 cut(s) 347, 373
Tru9I TTAA 2 cut(s) 347, 373
TscAI CASTG 3 cut(s) 81, 160, 199
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 3 cut(s) 81, 160, 199
Vha464I CTTAAG 1 cut(s) 346
XapI RAATTY 1 cut(s) 138
XceI RCATGY 1 cut(s) 224
XmiI GTMKAC 2 cut(s) 27, 291
XspI CTAG 2 cut(s) 56, 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.