Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Reverse (-)

58848426 .. 58850846

Gene Structure 2421 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00124530.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGATTGGTCCCAAAGGTTCAGGGCTAGAGGACTGGGAGCCCTCTTCTCACCACTACTGCTCCTTCTTTGGAGTTTCATGTGACCAGCAATCACGAGTTGTTGCTCTCAACGTGTCCGGTTTGCCCCTGTTTGGCTCGATTCCGGTGGAGATTGGGCTTCTGAACAAGCTCGTCAACCTCACCATTGCTGACGACAACTTGACAGGGAGTCTTCCCCTGGAGATCGCCAATCTGACTTCTTTAAAGCTCTTGAACGTCTCCAACAACTTGTTCAGTGGAAAATTTCCCGGAGAAGTCACGCTCAGAATGACAGAGCTTGAGGTTCTCGACGCGTACGACAACAACTTTATTGGGAGTCTTCCCCTTGAGATCGCTAGTCTTAGAAGGCTCAAACATCTGCATCTTGGCGGGAACTTTTTCACTGGAGAAATTCCAGGAAATTATTCAAAGATTCAAAGCTTAGAATATTTGGCCCTCAACGGTAATTCGCTTGCCGGAAAAGTTCCGGCCAGCTTGGCTCGGTTGAGGAATCTCAAGGAATTGTACATCGGGTACTATAACAATTTCAACGGTGGAATTCCACCTGAGTTGGGATCGTTGAGGTCGCTGCAAGTTCTAGACATGGCCAGCTGTGGCCTCTCCGGCACAATACCGACGACTATGGGCTTTTTGAAGAACGTACACTCGTTGTTTTTAAAGGCTAACCATTTCAGTGGTAATATACCTCCAGAACTTTCGGGTATGGCAAGCTTGATGAGTTTGACCCTCTCTATAAATGATCTCACCGGTGAAATACCAAAGAGTTTCTCAAAGCTCAAGAACCTTACACTTCTCAAGCTGAATGATAACAACCTCTACGGCCAGATACCCAACTTCATTGGTGATCTTCCTCATCTGGAGGTGTTTAGCGTTGGGAACAACAACTTTACATTTGCTCTTCCGGAGAGTCTTGGCCGGAATGAAAGACTTATGTACCTCAATGTAACCGGTAACCACCTCACCGGGTTGATTCCTCCTGATTTGTGCAAAGGAGGGAGGTTGAGGAAGTTGATTCTAACGGAGAACCACTTCTTTGGGCCGATTCCGGAAGCATTGGGCCGGTGCAAGTCGCTTATTGAAATCAGATTGATGAAAAACACACTCAACGGGACTATTCCTGCTGGAATCTTGAGCTTTCCTGATGTGATCATTATTGAGCTCAACGATAACCACTTATATGGAGACCTTCCGTCGCAGATGTCTGCTCCCTCAATCGAAATCCTCACACTTTCCCGGAATCATATTTCTGGAACAATCCCGTCCACCATTGGAACATTCAAGAATTTACAGACTCTTTCGCTGGATATGAACAGATTCTCCGGGCAAGTTCCAAAAGAAATCTTCAGTTTACAATCGTTAAACAGACTCGACATGAGCAGCAACAAATTCGGTAGTGAAATTCCGGCTGCAATTTCTGATTGTTCCTCTCTAACGTCCCTAGATTTAAGTCAAAACACTTTGGTTGGGGAAATCCCAAGAGGGATAGGCAAACTGAAAGTAATTGAGTTTCTTAATTTCTCAAGGAACAAGCTAACAGGTCCAATACCTGTGGAATTCAGATACATGGCGAGCCTCACAACTTTGGATCTCTCCTATAACAATTTCACTGGTACGAATCCAACCGAAGGAAATCCCAATCTGTGTTCGCCCAGAAAGGTGTTCTGCAGCTCCTATAACCACCCACGACCTGTAGACCATAAAGTCATCATCGCTGGACTCACTGGAGCTCTGCTAACTTTGCTACTCATGTCGCTTCTCATATATGTACTTATCTGGGTTTATAGGAAGAGAAAGATCAGAATTATTGAGAAATGTGGCTCTTGGAAGCTCACAGTTTTCCAAGTACAGCTTGATCTCAATATAGAGGACGTTCTCCAGTGTCTAAACGCGGAGAACATTATCGGCAGGGGCGGTGCTGGAGTTGTCTACAAGGGGACAATGCCAAACGGTGGTGATGTCGCCATCAAACGGTTGAAAAGGGATCAGGGATTTTCGGCTGAAATTAAAACATTGGGACAAATCAAGCACCGGAATATAGTGAGGCTGTTGGGGTACATGTCAAACAAGGACACAAATTTGTTGCTGTACGAGTACATGCCTAATGGTAGCTTGGGACAACTTTTGCATGGGTCTAATGGAAGGCATTTGGAGTGGGAAATGAGGTACAAGATTGCTGTGGAAGCTGCAAAGGGATTGTGTTATCTCCACCATGATTGCTCGCCTCTGATTATACACAGGGATGTAAAGTCCTATAACATCTTGCTGGACTCTAATTTTGAAGCCCATATTGCTGATTTCGGACTTGCCAAGTACTTTCAAGGACCAACAGATTGCATGTCTTCGTTTGCTGGTACCTTTGGTTACATTGCCCCAGGTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

806

Amino Acids

88.61

Weight (kDa)

8.39

Isoelectric Point (pI)

38.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	124 - 232	2.3e-08	Leucine-rich repeat region
LRR_14	PF23598	191 - 281	8.8e-06	Leucine-rich repeat region
LRR_8	PF13855	416 - 476	9.5e-07	Leucine rich repeat
LRR_8	PF13855	441 - 500	4.3e-08	Leucine rich repeat
LRR_8	PF13855	489 - 548	1e-07	Leucine rich repeat
Pkinase	PF00069	643 - 804	1.6e-32	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	643 - 785	2.6e-27	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1739
Acc65I	GGTACC	1 cut(s)	2390
AccB1I	GGYRCC	1 cut(s)	2390
AccB7I	CCANNNNNTGG	1 cut(s)	1988
AccI	GTMKAC	2 cut(s)	1731, 1965
AccII	CGCG	2 cut(s)	332, 1928
AccIII	TCCGGA	2 cut(s)	940, 1084
AciI	CCGC	3 cut(s)	408, 1928, 1950
AclWI	GGATC	3 cut(s)	601, 1632, 2028
AcoI	YGGCCR	4 cut(s)	507, 624, 859, 952
AcsI	RAATTY	8 cut(s)	281, 429, 576, 1321, 1424, 1437, 1592, 2113
AcuI	CTGAAG	1 cut(s)	1366
AfiI	CCNNNNNNNGG	5 cut(s)	131, 590, 1664, 1988, 2007
AflIII	ACRYGT	3 cut(s)	111, 330, 2094
AgeI	ACCGGT	2 cut(s)	785, 986
AhdI	GACNNNNNGTC	2 cut(s)	207, 1228
AjnI	CCWGG	3 cut(s)	216, 433, 2410
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AloI	GAACNNNNNNTCC	2 cut(s)	1340, 1372
Alw21I	GWGCWC	2 cut(s)	1200, 1768
Alw26I	GTCTC	2 cut(s)	262, 1215
AlwI	GGATC	3 cut(s)	601, 1632, 2028
Aor13HI	TCCGGA	2 cut(s)	940, 1084
AoxI	GGCC	8 cut(s)	471, 507, 624, 634, 859, 952, 1076, 1096
ApeKI	GCWGC	5 cut(s)	607, 1416, 1445, 1704, 2222
ApoI	RAATTY	8 cut(s)	281, 429, 576, 1321, 1424, 1437, 1592, 2113
ArsI	GACNNNNNNTTYG	2 cut(s)	2297, 2329
AsiGI	ACCGGT	2 cut(s)	785, 986
Asp700I	GAANNNNTTC	4 cut(s)	416, 442, 1067, 1352
Asp718I	GGTACC	1 cut(s)	2390
AspS9I	GGNCC	6 cut(s)	8, 472, 1076, 1096, 1577, 2360
AsuC2I	CCSGG	4 cut(s)	288, 1003, 1273, 1360
AsuHPI	GGTGA	7 cut(s)	41, 172, 775, 800, 893, 991, 2003
AvaII	GGWCC	3 cut(s)	8, 1577, 2360
BaeI	ACNNNNGTAYC	2 cut(s)	956, 989
BalI	TGGCCA	1 cut(s)	626
BanI	GGYRCC	1 cut(s)	2390
BanII	GRGCYC	3 cut(s)	42, 1200, 1768
BauI	CACGAG	1 cut(s)	93
BbsI	GAAGAC	3 cut(s)	203, 350, 2370
Bbv12I	GWGCWC	2 cut(s)	1200, 1768
BbvI	GCAGC	5 cut(s)	594, 1428, 1432, 1716, 2209
BccI	CCATC	1 cut(s)	2009
BceAI	ACGGC	1 cut(s)	874
BcgI	CGANNNNNNTGC	2 cut(s)	1408, 1442
BciT130I	CCWGG	3 cut(s)	218, 435, 2412
BclI	TGATCA	1 cut(s)	1185
BcnI	CCSGG	4 cut(s)	288, 1003, 1273, 1360
BcoDI	GTCTC	2 cut(s)	262, 1215
BfaI	CTAG	4 cut(s)	26, 375, 617, 1478
BfmI	CTRYAG	2 cut(s)	1702, 1728
BglI	GCCNNNNNGGC	2 cut(s)	515, 642
BisI	GCNGC	5 cut(s)	608, 1417, 1446, 1705, 2223
BlsI	GCNGC	5 cut(s)	609, 1418, 1447, 1706, 2224
BmcAI	AGTACT	1 cut(s)	2351
Bme1390I	CCNGG	7 cut(s)	218, 288, 435, 1003, 1273, 1360, 2412
Bme18I	GGWCC	3 cut(s)	8, 1577, 2360
BmeRI	GACNNNNNGTC	2 cut(s)	207, 1228
BmgT120I	GGNCC	6 cut(s)	8, 472, 1076, 1096, 1577, 2360
BmiI	GGNNCC	3 cut(s)	10, 39, 2392
BmrFI	CCNGG	7 cut(s)	218, 288, 435, 1003, 1273, 1360, 2412
BmrI	ACTGGG	1 cut(s)	43
BmsI	GCATC	1 cut(s)	409
BmuI	ACTGGG	1 cut(s)	43
BpiI	GAAGAC	3 cut(s)	203, 350, 2370
BpmI	CTGGAG	7 cut(s)	239, 444, 711, 917, 1782, 1898, 1977
BpuEI	CTTGAG	7 cut(s)	338, 386, 518, 800, 818, 1189, 1543
BpuMI	CCSGG	4 cut(s)	288, 1003, 1273, 1360
BsaI	GGTCTC	1 cut(s)	1215
BsaJI	CCNNGG	2 cut(s)	216, 2410
BsaWI	WCCGGW	7 cut(s)	116, 142, 785, 940, 986, 1084, 2067
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 1340, 1370
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 590, 1664, 1988, 2007
Bse118I	RCCGGY	3 cut(s)	785, 986, 1098
Bse1I	ACTGG	5 cut(s)	38, 427, 1651, 1765, 1915
Bse3DI	GCAATG	2 cut(s)	183, 2403
BseAI	TCCGGA	2 cut(s)	940, 1084
BseBI	CCWGG	3 cut(s)	218, 435, 2412
BseDI	CCNNGG	2 cut(s)	216, 2410
BseGI	GGATG	1 cut(s)	2284
BseLI	CCNNNNNNNGG	5 cut(s)	131, 590, 1664, 1988, 2007
BseMI	GCAATG	2 cut(s)	183, 2403
BseMII	CTCAG	2 cut(s)	316, 576
BseNI	ACTGG	5 cut(s)	38, 427, 1651, 1765, 1915
BseXI	GCAGC	5 cut(s)	594, 1428, 1432, 1716, 2209
Bsh1236I	CGCG	2 cut(s)	332, 1928
BshFI	GGCC	8 cut(s)	473, 509, 626, 636, 861, 954, 1078, 1098
BshNI	GGYRCC	1 cut(s)	2390
BshTI	ACCGGT	2 cut(s)	785, 986
BsiHKAI	GWGCWC	2 cut(s)	1200, 1768
BsiWI	CGTACG	1 cut(s)	333
BslFI	GGGAC	5 cut(s)	1162, 1459, 1987, 2067, 2166
BslI	CCNNNNNNNGG	5 cut(s)	131, 590, 1664, 1988, 2007
BsmAI	GTCTC	2 cut(s)	262, 1215
BsmBI	CGTCTC	1 cut(s)	262
BsmFI	GGGAC	5 cut(s)	1162, 1459, 1987, 2067, 2166
BsnI	GGCC	8 cut(s)	473, 509, 626, 636, 861, 954, 1078, 1098
Bso31I	GGTCTC	1 cut(s)	1215
Bsp1286I	GDGCHC	3 cut(s)	42, 1200, 1768
Bsp13I	TCCGGA	2 cut(s)	940, 1084
Bsp1407I	TGTACA	1 cut(s)	543
BspACI	CCGC	3 cut(s)	408, 1928, 1950
BspANI	GGCC	8 cut(s)	473, 509, 626, 636, 861, 954, 1078, 1098
BspCNI	CTCAG	2 cut(s)	315, 577
BspEI	TCCGGA	2 cut(s)	940, 1084
BspFNI	CGCG	2 cut(s)	332, 1928
BspLI	GGNNCC	3 cut(s)	10, 39, 2392
BspMAI	CTGCAG	1 cut(s)	1706
BspPI	GGATC	3 cut(s)	601, 1632, 2028
BspQI	GCTCTTC	1 cut(s)	942
BspT107I	GGYRCC	1 cut(s)	2390
BspTNI	GGTCTC	1 cut(s)	1215
BsrDI	GCAATG	2 cut(s)	183, 2403
BsrFI	RCCGGY	3 cut(s)	785, 986, 1098
BsrGI	TGTACA	1 cut(s)	543
BsrI	ACTGG	5 cut(s)	38, 427, 1651, 1765, 1915
BssAI	RCCGGY	3 cut(s)	785, 986, 1098
BssECI	CCNNGG	2 cut(s)	216, 2410
BssSI	CACGAG	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	3 cut(s)	218, 435, 2412
Bst4CI	ACNGT	5 cut(s)	482, 572, 1873, 1988, 2010
Bst6I	CTCTTC	3 cut(s)	49, 942, 1820
BstAUI	TGTACA	1 cut(s)	543
BstC8I	GCNNGC	6 cut(s)	492, 511, 628, 748, 1609, 2258
BstDEI	CTNAG	4 cut(s)	302, 380, 460, 585
BstEII	GGTNACC	1 cut(s)	989
BstF5I	GGATG	1 cut(s)	2284
BstFNI	CGCG	2 cut(s)	332, 1928
BstMAI	GTCTC	2 cut(s)	262, 1215
BstMWI	GCNNNNNNNGC	6 cut(s)	515, 642, 1777, 2219, 2327, 2414
BstNI	CCWGG	3 cut(s)	218, 435, 2412
BstNSI	RCATGY	3 cut(s)	2098, 2137, 2377
BstPI	GGTNACC	1 cut(s)	989
BstSCI	CCNGG	7 cut(s)	216, 286, 433, 1001, 1271, 1358, 2410
BstSFI	CTRYAG	2 cut(s)	1702, 1728
BstUI	CGCG	2 cut(s)	332, 1928
BstV1I	GCAGC	5 cut(s)	594, 1428, 1432, 1716, 2209
BstV2I	GAAGAC	3 cut(s)	203, 350, 2370
BstX2I	RGATCY	1 cut(s)	1624
BstXI	CCANNNNNNTGG	3 cut(s)	713, 1073, 1217
BstYI	RGATCY	1 cut(s)	1624
BsuRI	GGCC	8 cut(s)	473, 509, 626, 636, 861, 954, 1078, 1098
BtgZI	GCGATG	1 cut(s)	1732
BtsCI	GGATG	1 cut(s)	2284
BtsIMutI	CAGTG	6 cut(s)	280, 420, 718, 1644, 1758, 1922
Cac8I	GCNNGC	6 cut(s)	492, 511, 628, 748, 1609, 2258
Cfr10I	RCCGGY	3 cut(s)	785, 986, 1098
Cfr13I	GGNCC	6 cut(s)	8, 472, 1076, 1096, 1577, 2360
CseI	GACGC	1 cut(s)	338
CspAI	ACCGGT	2 cut(s)	785, 986
CspCI	CAANNNNNGTGG	6 cut(s)	570, 605, 1569, 1604, 2234, 2269
DdeI	CTNAG	4 cut(s)	302, 380, 460, 585
DraI	TTTAAA	2 cut(s)	243, 696
DrdI	GACNNNNNNGTC	1 cut(s)	1739
DriI	GACNNNNNGTC	2 cut(s)	207, 1228
DseDI	GACNNNNNNGTC	1 cut(s)	1739
EaeI	YGGCCR	4 cut(s)	507, 624, 859, 952
Eam1104I	CTCTTC	3 cut(s)	49, 942, 1820
Eam1105I	GACNNNNNGTC	2 cut(s)	207, 1228
EarI	CTCTTC	3 cut(s)	49, 942, 1820
Ecl136II	GAGCTC	2 cut(s)	1198, 1766
Eco24I	GRGCYC	3 cut(s)	42, 1200, 1768
Eco31I	GGTCTC	1 cut(s)	1215
Eco47I	GGWCC	3 cut(s)	8, 1577, 2360
Eco53kI	GAGCTC	2 cut(s)	1198, 1766
Eco57I	CTGAAG	1 cut(s)	1366
Eco91I	GGTNACC	1 cut(s)	989
EcoICRI	GAGCTC	2 cut(s)	1198, 1766
EcoO65I	GGTNACC	1 cut(s)	989
EcoRI	GAATTC	2 cut(s)	576, 1592
EcoRII	CCWGG	3 cut(s)	216, 433, 2410
EcoT38I	GRGCYC	3 cut(s)	42, 1200, 1768
Esp3I	CGTCTC	1 cut(s)	262
FalI	AAGNNNNNCTT	2 cut(s)	1872, 1904
FaqI	GGGAC	5 cut(s)	1162, 1459, 1987, 2067, 2166
FauI	CCCGC	1 cut(s)	401
FbaI	TGATCA	1 cut(s)	1185
FblI	GTMKAC	2 cut(s)	1731, 1965
Fnu4HI	GCNGC	5 cut(s)	608, 1417, 1446, 1705, 2223
FokI	GGATG	1 cut(s)	2291
FriOI	GRGCYC	3 cut(s)	42, 1200, 1768
Fsp4HI	GCNGC	5 cut(s)	608, 1417, 1446, 1705, 2223
FspBI	CTAG	4 cut(s)	26, 375, 617, 1478
GluI	GCNGC	5 cut(s)	608, 1417, 1446, 1705, 2223
GsuI	CTGGAG	7 cut(s)	239, 444, 711, 917, 1782, 1898, 1977
HaeIII	GGCC	8 cut(s)	473, 509, 626, 636, 861, 954, 1078, 1098
HgaI	GACGC	1 cut(s)	338
HincII	GTYRAC	1 cut(s)	175
HindII	GTYRAC	1 cut(s)	175
HindIII	AAGCTT	2 cut(s)	457, 748
HphI	GGTGA	7 cut(s)	41, 172, 775, 800, 893, 991, 2003
Hpy166II	GTNNAC	6 cut(s)	175, 682, 1302, 1388, 1732, 1966
Hpy188I	TCNGA	9 cut(s)	162, 234, 305, 1124, 1456, 1598, 1838, 2265, 2339
Hpy8I	GTNNAC	6 cut(s)	175, 682, 1302, 1388, 1732, 1966
Hpy99I	CGWCG	3 cut(s)	332, 658, 1234
HpyAV	CCTTC	5 cut(s)	73, 378, 1235, 1658, 2172
HpyCH4III	ACNGT	5 cut(s)	482, 572, 1873, 1988, 2010
HpyCH4IV	ACGT	5 cut(s)	111, 255, 678, 1472, 1908
HpyCH4V	TGCA	9 cut(s)	400, 610, 1026, 1104, 1448, 1704, 2164, 2225, 2373
HpyF10VI	GCNNNNNNNGC	6 cut(s)	515, 642, 1777, 2219, 2327, 2414
HpyF3I	CTNAG	4 cut(s)	302, 380, 460, 585
HpySE526I	ACGT	5 cut(s)	111, 255, 678, 1472, 1908
Kpn2I	TCCGGA	2 cut(s)	940, 1084
KpnI	GGTACC	1 cut(s)	2394
Ksp22I	TGATCA	1 cut(s)	1185
LguI	GCTCTTC	1 cut(s)	942
LmnI	GCTCC	5 cut(s)	37, 65, 1249, 1712, 1763
Lsp1109I	GCAGC	5 cut(s)	594, 1428, 1432, 1716, 2209
LweI	GCATC	1 cut(s)	409
MaeI	CTAG	4 cut(s)	26, 375, 617, 1478
MaeII	ACGT	5 cut(s)	111, 255, 678, 1472, 1908
MaeIII	GTNAC	5 cut(s)	80, 295, 982, 989, 2399
MboII	GAAGA	9 cut(s)	36, 203, 350, 685, 878, 929, 1372, 1837, 2370
MflI	RGATCY	1 cut(s)	1624
MhlI	GDGCHC	3 cut(s)	42, 1200, 1768
MlsI	TGGCCA	1 cut(s)	626
MluI	ACGCGT	1 cut(s)	330
MluNI	TGGCCA	1 cut(s)	626
MlyI	GAGTC	7 cut(s)	217, 364, 955, 1324, 1398, 1749, 2300
MmeI	TCCRAC	2 cut(s)	285, 1682
Mox20I	TGGCCA	1 cut(s)	626
MroI	TCCGGA	2 cut(s)	940, 1084
MroXI	GAANNNNTTC	4 cut(s)	416, 442, 1067, 1352
MscI	TGGCCA	1 cut(s)	626
MseI	TTAA	6 cut(s)	242, 695, 1397, 1484, 1551, 2043
MslI	CAYNNNNRTG	3 cut(s)	711, 1215, 2277
Msp20I	TGGCCA	1 cut(s)	626
MspA1I	CMGCKG	1 cut(s)	630
MspR9I	CCNGG	7 cut(s)	218, 288, 435, 1003, 1273, 1360, 2412
MvaI	CCWGG	3 cut(s)	218, 435, 2412
MvnI	CGCG	2 cut(s)	332, 1928
MwoI	GCNNNNNNNGC	6 cut(s)	515, 642, 1777, 2219, 2327, 2414
NciI	CCSGG	4 cut(s)	288, 1003, 1273, 1360
NlaIV	GGNNCC	3 cut(s)	10, 39, 2392
NmuCI	GTSAC	2 cut(s)	80, 295
NspI	RCATGY	3 cut(s)	2098, 2137, 2377
PciI	ACATGT	1 cut(s)	2094
PciSI	GCTCTTC	1 cut(s)	942
PcsI	WCGNNNNNNNCGW	1 cut(s)	333
PdmI	GAANNNNTTC	4 cut(s)	416, 442, 1067, 1352
Pfl23II	CGTACG	1 cut(s)	333
PflMI	CCANNNNNTGG	1 cut(s)	1988
PfoI	TCCNGGA	3 cut(s)	286, 433, 1271
PinAI	ACCGGT	2 cut(s)	785, 986
PkrI	GCNGC	5 cut(s)	609, 1418, 1447, 1706, 2224
PleI	GAGTC	7 cut(s)	216, 363, 954, 1324, 1398, 1749, 2300
PpsI	GAGTC	7 cut(s)	216, 363, 954, 1324, 1398, 1749, 2300
PscI	ACATGT	1 cut(s)	2094
Psp124BI	GAGCTC	2 cut(s)	1200, 1768
Psp6I	CCWGG	3 cut(s)	216, 433, 2410
PspEI	GGTNACC	1 cut(s)	989
PspGI	CCWGG	3 cut(s)	216, 433, 2410
PspLI	CGTACG	1 cut(s)	333
PspN4I	GGNNCC	3 cut(s)	10, 39, 2392
PspPI	GGNCC	6 cut(s)	8, 472, 1076, 1096, 1577, 2360
PstI	CTGCAG	1 cut(s)	1706
PsuI	RGATCY	1 cut(s)	1624
PvuII	CAGCTG	1 cut(s)	630
RseI	CAYNNNNRTG	3 cut(s)	711, 1215, 2277
SacI	GAGCTC	2 cut(s)	1200, 1768
SapI	GCTCTTC	1 cut(s)	942
SaqAI	TTAA	6 cut(s)	242, 695, 1397, 1484, 1551, 2043
SatI	GCNGC	5 cut(s)	608, 1417, 1446, 1705, 2223
Sau96I	GGNCC	6 cut(s)	8, 472, 1076, 1096, 1577, 2360
ScaI	AGTACT	1 cut(s)	2351
SchI	GAGTC	7 cut(s)	217, 364, 955, 1324, 1398, 1749, 2300
ScrFI	CCNGG	7 cut(s)	218, 288, 435, 1003, 1273, 1360, 2412
SduI	GDGCHC	3 cut(s)	42, 1200, 1768
SfaNI	GCATC	1 cut(s)	409
SfcI	CTRYAG	2 cut(s)	1702, 1728
SgrAI	CRCCGGYG	1 cut(s)	785
SinI	GGWCC	3 cut(s)	8, 1577, 2360
SmiMI	CAYNNNNRTG	3 cut(s)	711, 1215, 2277
SmlI	CTYRAG	7 cut(s)	317, 365, 533, 815, 833, 1168, 1558
SmoI	CTYRAG	7 cut(s)	317, 365, 533, 815, 833, 1168, 1558
SsiI	CCGC	3 cut(s)	408, 1928, 1950
SspI	AATATT	1 cut(s)	467
SspMI	CTAG	4 cut(s)	26, 375, 617, 1478
SstI	GAGCTC	2 cut(s)	1200, 1768
StyD4I	CCNGG	7 cut(s)	216, 286, 433, 1001, 1271, 1358, 2410
TaaI	ACNGT	5 cut(s)	482, 572, 1873, 1988, 2010
TaiI	ACGT	5 cut(s)	114, 258, 681, 1475, 1911
TaqI	TCGA	4 cut(s)	137, 327, 1254, 1407
TatI	WGTACW	5 cut(s)	543, 1804, 1882, 2130, 2349
Tru1I	TTAA	6 cut(s)	242, 695, 1397, 1484, 1551, 2043
Tru9I	TTAA	6 cut(s)	242, 695, 1397, 1484, 1551, 2043
TscAI	CASTG	6 cut(s)	280, 427, 718, 1651, 1765, 1922
TseFI	GTSAC	2 cut(s)	80, 295
TseI	GCWGC	5 cut(s)	607, 1416, 1445, 1704, 2222
Tsp45I	GTSAC	2 cut(s)	80, 295
TspDTI	ATGAA	5 cut(s)	66, 865, 975, 1145, 1361
TspGWI	ACGGA	2 cut(s)	1073, 1218
TspRI	CASTG	6 cut(s)	280, 427, 718, 1651, 1765, 1922
Van91I	CCANNNNNTGG	1 cut(s)	1988
VpaK11BI	GGWCC	3 cut(s)	8, 1577, 2360
XapI	RAATTY	8 cut(s)	281, 429, 576, 1321, 1424, 1437, 1592, 2113
XbaI	TCTAGA	1 cut(s)	616
XceI	RCATGY	3 cut(s)	2098, 2137, 2377
XmiI	GTMKAC	2 cut(s)	1731, 1965
XmnI	GAANNNNTTC	4 cut(s)	416, 442, 1067, 1352
XspI	CTAG	4 cut(s)	26, 375, 617, 1478
ZrmI	AGTACT	1 cut(s)	2351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.