Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

32055761 .. 32058730

Gene Structure 2970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG289000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGATTGGTCCCAAAGGTTCAGGGCTGGAGGACTGGGAGCCCTCTTCTCACCACTACTGCTCCTTCTCTGGAGTTTCATGTGACCAGCAATCACGAGTTGTGGCTCTTAACGTGTCCAGTTTGCTTCTGTCTGGCTCGATTCCAGCAGAGATTGGGCTTCTGAACAAGCTCATCAACCTCACCATTGCTGACACCAACTTGACAGGGAGTCTTCCCCTCGAGATGGCCAACCTGACTTCATTAAAGCTTTTGAACATCTCCAACAGCGACCTCAATGGGAGTTTTCCTGGAGAAATCATACTCCGAATGACGGAGCTTGAGGTTCTCGACGCCTACAACAACGACTTTTTAGGGACTCTTCCGCTTGAGATTGCCAGTCTCAAAAAGCTCAGATATCTACATCTTGGCGATAGCTTCTTCACTGGAGAAATTCCCGGAAATTATTCAAATATTCATAGCTTAGAATATTTGGCCCTCAACGATAACTTGCTTGCCGGAAAAGTTCCGGCTAGCTTGGCTCGGTTGAAGAATCTCAAGAAACTGTACGTCGGGAATGTTAGAATCTCAATAACCTGTAACAAGTTCGACGGTGGAATTCCACCTGAGTTGGGAATGTTAGAGTCGCTGCAAGTGCTTGACATGGTCGGCTGTAAGCTCTCCGGCACGATTCCGACGACTCTGGGCTTTTTGAAGAACTTACACACGTTGCATATATCGAATAACAGTTTGAGTGGTAATATACCTCCAGAACTTTCGGATATGGTAAACCTGATGAGTTTGGACCTCTCTGTTAACAAACTCACCGGTGAAATACCAGAGAGTTTCTCAAAGCTCAAGAACCTTAAACTTCTCCAACTAGTTGGGAACAACCTCTACGGCCAGATACCCAACTTCATTGGTGATCTTCCTCATCTGGAGGCGTTTGACGTTGGGGGCAACAGCTTTACATTTGCTCTACCGGAGAGTCTTGGCCGGAATGAAAGACTTACGTCCCTCAAGGTATCCGGTAACGACCTTACCGGGTTGATTCCTCGGGATTTGTGCAAAGGAGGGAGGTTAAGGGAGTTGATTCTGAAGGAGAACCACTTCTTTGGGCCGATTCCGGAGGAATTGGGCCGGTGCAAGTCGCTTGTGGATATCCTATTGATGAAAAACACACTGAATGGGACTATTCCTCCTGGAATCTTCAGCTTACCTGATGTGAACGTGATCAACTTCAACGATAACCACTTGTCCGGAGAACTTCCGATGCAGATGTCGGCTGCCTCACTTGAAGTCCTCACACTCTCCCGGAATCAGATTTCTGGAAAAATCCCATCCACCATCGGAACCCTCAAGAATTTACAGAAGCTTGAGCTGGCTATGAACAGATTCTCCGGGCAAGTTCCAAAAGAAATATTCAGTTTACAATCGTTATACATACTCAACATGAGCACCAACCAATTCGGTGGTGAAATTCCAGCTGCAATTTCTGATTGTTCCTCTCTAACATCCCTAGATTTTAGTCAAAACAGTTTAGTTGGAGAAATCCCAAGAGGGATAGGCAAACTGAAAGTTATCGAGTTTCTTAATTTCTCAAGGAACAAGCTAACAGTTGTGGACTCCAGGCTCAATGGGTTCCCATTAGCAAGTGTCGAGCATGTGTTCAAGATAGCAATGATGTGCGTCGAGAATCAAAGCTCTGCACGGCCTACAATGAGGGAAGTCGTCTACTTCCTCACTAATCCTCCTTGTTCTGCTCCAGGCATGACAAACCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

586

Amino Acids

63.74

Weight (kDa)

5.88

Isoelectric Point (pI)

29.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	124 - 240	6.6e-11	Leucine-rich repeat region
LRR_8	PF13855	232 - 291	1.1e-07	Leucine rich repeat
LRR_8	PF13855	423 - 482	7.2e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1710
AccIII	TCCGGA	2 cut(s)	1102, 1235
AciI	CCGC	1 cut(s)	362
AcoI	YGGCCR	3 cut(s)	225, 877, 970
AcsI	RAATTY	4 cut(s)	429, 594, 1339, 1455
AcuI	CTGAAG	2 cut(s)	1094, 1171
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	1 cut(s)	545
AfiI	CCNNNNNNNGG	3 cut(s)	223, 310, 608
AflIII	ACRYGT	2 cut(s)	111, 702
AgeI	ACCGGT	1 cut(s)	803
AgsI	TTSAA	7 cut(s)	253, 447, 526, 691, 1219, 1274, 1648
AhdI	GACNNNNNGTC	1 cut(s)	207
AhlI	ACTAGT	1 cut(s)	856
AjnI	CCWGG	4 cut(s)	286, 1177, 1604, 1741
AloI	GAACNNNNNNTCC	2 cut(s)	1358, 1390
Alw21I	GWGCWC	1 cut(s)	1436
Alw26I	GTCTC	1 cut(s)	383
Ama87I	CYCGRG	2 cut(s)	218, 1032
Aor13HI	TCCGGA	2 cut(s)	1102, 1235
AoxI	GGCC	7 cut(s)	225, 471, 877, 970, 1094, 1114, 1688
ApeKI	GCWGC	3 cut(s)	625, 1262, 1463
ApoI	RAATTY	4 cut(s)	429, 594, 1339, 1455
AsiGI	ACCGGT	1 cut(s)	803
Asp700I	GAANNNNTTC	3 cut(s)	442, 1085, 1370
AspS9I	GGNCC	5 cut(s)	8, 472, 781, 1094, 1114
AsuC2I	CCSGG	4 cut(s)	435, 1021, 1291, 1378
AsuHPI	GGTGA	6 cut(s)	41, 172, 793, 818, 911, 1463
AsuNHI	GCTAGC	1 cut(s)	509
AvaI	CYCGRG	2 cut(s)	218, 1032
AvaII	GGWCC	2 cut(s)	8, 781
BalI	TGGCCA	1 cut(s)	227
BanII	GRGCYC	1 cut(s)	42
BauI	CACGAG	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	203
Bbv12I	GWGCWC	1 cut(s)	1436
BbvI	GCAGC	3 cut(s)	612, 1249, 1450
BccI	CCATC	3 cut(s)	217, 1324, 1331
BceAI	ACGGC	2 cut(s)	892, 1703
BciT130I	CCWGG	4 cut(s)	288, 1179, 1606, 1743
BciVI	GTATCC	1 cut(s)	1012
BclI	TGATCA	1 cut(s)	1209
BcnI	CCSGG	4 cut(s)	435, 1021, 1291, 1378
BcoDI	GTCTC	1 cut(s)	383
BcuI	ACTAGT	1 cut(s)	856
BfaI	CTAG	3 cut(s)	510, 857, 1496
BfuI	GTATCC	1 cut(s)	1012
BisI	GCNGC	3 cut(s)	626, 1263, 1464
BlsI	GCNGC	3 cut(s)	627, 1264, 1465
Bme1390I	CCNGG	8 cut(s)	288, 435, 1021, 1179, 1291, 1378, 1606, 1743
Bme18I	GGWCC	2 cut(s)	8, 781
BmeRI	GACNNNNNGTC	1 cut(s)	207
BmeT110I	CYCGRG	2 cut(s)	218, 1032
BmgT120I	GGNCC	5 cut(s)	8, 472, 781, 1094, 1114
BmiI	GGNNCC	4 cut(s)	10, 39, 1330, 1619
BmrFI	CCNGG	8 cut(s)	288, 435, 1021, 1179, 1291, 1378, 1606, 1743
BmrI	ACTGGG	1 cut(s)	43
BmsI	GCATC	1 cut(s)	1239
BmtI	GCTAGC	1 cut(s)	513
BmuI	ACTGGG	1 cut(s)	43
BoxI	GACNNNNGTC	1 cut(s)	988
BpiI	GAAGAC	1 cut(s)	203
BplI	GAGNNNNNCTC	2 cut(s)	809, 841
BpmI	CTGGAG	8 cut(s)	47, 90, 309, 444, 729, 935, 1588, 1725
BpuEI	CTTGAG	8 cut(s)	338, 386, 518, 818, 980, 1319, 1373, 1561
BpuMI	CCSGG	4 cut(s)	435, 1021, 1291, 1378
BsaHI	GRCGYC	1 cut(s)	330
BsaJI	CCNNGG	1 cut(s)	1031
BsaWI	WCCGGW	5 cut(s)	803, 958, 1004, 1102, 1235
BsaXI	ACNNNNNCTCC	8 cut(s)	44, 74, 1159, 1189, 1358, 1388, 1711, 1741
Bsc4I	CCNNNNNNNGG	3 cut(s)	223, 310, 608
Bse118I	RCCGGY	2 cut(s)	803, 1116
Bse1I	ACTGG	4 cut(s)	38, 117, 375, 427
Bse3DI	GCAATG	2 cut(s)	183, 1662
BseAI	TCCGGA	2 cut(s)	1102, 1235
BseBI	CCWGG	4 cut(s)	288, 1179, 1606, 1743
BseDI	CCNNGG	1 cut(s)	1031
BseGI	GGATG	2 cut(s)	1316, 1490
BseLI	CCNNNNNNNGG	3 cut(s)	223, 310, 608
BseMI	GCAATG	2 cut(s)	183, 1662
BseMII	CTCAG	2 cut(s)	403, 594
BseNI	ACTGG	4 cut(s)	38, 117, 375, 427
BseXI	GCAGC	3 cut(s)	612, 1249, 1450
BsgI	GTGCAG	1 cut(s)	1668
BshFI	GGCC	7 cut(s)	227, 473, 879, 972, 1096, 1116, 1690
BshTI	ACCGGT	1 cut(s)	803
BsiHKAI	GWGCWC	1 cut(s)	1436
BsiHKCI	CYCGRG	2 cut(s)	218, 1032
BslFI	GGGAC	3 cut(s)	367, 976, 1180
BslI	CCNNNNNNNGG	3 cut(s)	223, 310, 608
BsmAI	GTCTC	1 cut(s)	383
BsmFI	GGGAC	3 cut(s)	367, 976, 1180
BsnI	GGCC	7 cut(s)	227, 473, 879, 972, 1096, 1116, 1690
BsoBI	CYCGRG	2 cut(s)	218, 1032
Bsp1286I	GDGCHC	2 cut(s)	42, 1436
Bsp13I	TCCGGA	2 cut(s)	1102, 1235
Bsp143I	GATC	2 cut(s)	901, 1209
BspACI	CCGC	1 cut(s)	362
BspANI	GGCC	7 cut(s)	227, 473, 879, 972, 1096, 1116, 1690
BspCNI	CTCAG	2 cut(s)	402, 595
BspEI	TCCGGA	2 cut(s)	1102, 1235
BspLI	GGNNCC	4 cut(s)	10, 39, 1330, 1619
BspOI	GCTAGC	1 cut(s)	513
BsrDI	GCAATG	2 cut(s)	183, 1662
BsrFI	RCCGGY	2 cut(s)	803, 1116
BsrI	ACTGG	4 cut(s)	38, 117, 375, 427
BssAI	RCCGGY	2 cut(s)	803, 1116
BssECI	CCNNGG	1 cut(s)	1031
BssMI	GATC	2 cut(s)	901, 1209
BssNI	GRCGYC	1 cut(s)	330
BssSI	CACGAG	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	4 cut(s)	288, 1179, 1606, 1743
Bst4CI	ACNGT	5 cut(s)	543, 590, 725, 1514, 1594
Bst6I	CTCTTC	2 cut(s)	49, 363
BstACI	GRCGYC	1 cut(s)	330
BstC8I	GCNNGC	3 cut(s)	492, 511, 1359
BstDEI	CTNAG	3 cut(s)	389, 460, 603
BstF5I	GGATG	2 cut(s)	1316, 1490
BstKTI	GATC	2 cut(s)	904, 1212
BstMAI	GTCTC	1 cut(s)	383
BstMBI	GATC	2 cut(s)	901, 1209
BstMWI	GCNNNNNNNGC	2 cut(s)	515, 631
BstNI	CCWGG	4 cut(s)	288, 1179, 1606, 1743
BstNSI	RCATGY	1 cut(s)	1643
BstPAI	GACNNNNGTC	1 cut(s)	988
BstSCI	CCNGG	8 cut(s)	286, 433, 1019, 1177, 1289, 1376, 1604, 1741
BstV1I	GCAGC	3 cut(s)	612, 1249, 1450
BstV2I	GAAGAC	1 cut(s)	203
BstXI	CCANNNNNNTGG	3 cut(s)	860, 1091, 1448
BsuI	GTATCC	1 cut(s)	1012
BsuRI	GGCC	7 cut(s)	227, 473, 879, 972, 1096, 1116, 1690
BtsCI	GGATG	2 cut(s)	1316, 1490
BtsIMutI	CAGTG	2 cut(s)	420, 1157
Cac8I	GCNNGC	3 cut(s)	492, 511, 1359
Cfr10I	RCCGGY	2 cut(s)	803, 1116
Cfr13I	GGNCC	5 cut(s)	8, 472, 781, 1094, 1114
CseI	GACGC	2 cut(s)	338, 1654
Csp6I	GTAC	1 cut(s)	544
CspAI	ACCGGT	1 cut(s)	803
CspCI	CAANNNNNGTGG	2 cut(s)	588, 623
CviAII	CATG	5 cut(s)	78, 640, 1429, 1640, 1747
CviQI	GTAC	1 cut(s)	544
DdeI	CTNAG	3 cut(s)	389, 460, 603
DpnI	GATC	2 cut(s)	903, 1211
DpnII	GATC	2 cut(s)	901, 1209
DriI	GACNNNNNGTC	1 cut(s)	207
EaeI	YGGCCR	3 cut(s)	225, 877, 970
Eam1104I	CTCTTC	2 cut(s)	49, 363
Eam1105I	GACNNNNNGTC	1 cut(s)	207
EarI	CTCTTC	2 cut(s)	49, 363
Eco24I	GRGCYC	1 cut(s)	42
Eco32I	GATATC	2 cut(s)	395, 1138
Eco47I	GGWCC	2 cut(s)	8, 781
Eco57I	CTGAAG	2 cut(s)	1094, 1171
Eco88I	CYCGRG	2 cut(s)	218, 1032
EcoRI	GAATTC	1 cut(s)	594
EcoRII	CCWGG	4 cut(s)	286, 1177, 1604, 1741
EcoRV	GATATC	2 cut(s)	395, 1138
EcoT38I	GRGCYC	1 cut(s)	42
FaeI	CATG	5 cut(s)	81, 643, 1432, 1643, 1750
FaqI	GGGAC	3 cut(s)	367, 976, 1180
FatI	CATG	5 cut(s)	77, 639, 1428, 1639, 1746
FbaI	TGATCA	1 cut(s)	1209
FblI	GTMKAC	1 cut(s)	1710
Fnu4HI	GCNGC	3 cut(s)	626, 1263, 1464
FokI	GGATG	2 cut(s)	1303, 1477
FriOI	GRGCYC	1 cut(s)	42
Fsp4HI	GCNGC	3 cut(s)	626, 1263, 1464
FspBI	CTAG	3 cut(s)	510, 857, 1496
GluI	GCNGC	3 cut(s)	626, 1263, 1464
GsuI	CTGGAG	8 cut(s)	47, 90, 309, 444, 729, 935, 1588, 1725
HaeIII	GGCC	7 cut(s)	227, 473, 879, 972, 1096, 1116, 1690
HgaI	GACGC	2 cut(s)	338, 1654
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	5 cut(s)	81, 643, 1432, 1643, 1750
HincII	GTYRAC	1 cut(s)	793
HindII	GTYRAC	1 cut(s)	793
HindIII	AAGCTT	2 cut(s)	245, 1349
HpaI	GTTAAC	1 cut(s)	793
HphI	GGTGA	6 cut(s)	41, 172, 793, 818, 911, 1463
Hpy166II	GTNNAC	6 cut(s)	766, 793, 1204, 1406, 1600, 1711
Hpy8I	GTNNAC	6 cut(s)	766, 793, 1204, 1406, 1600, 1711
Hpy99I	CGWCG	5 cut(s)	332, 551, 590, 676, 1670
HpyAV	CCTTC	2 cut(s)	73, 1069
HpyCH4III	ACNGT	5 cut(s)	543, 590, 725, 1514, 1594
HpyCH4IV	ACGT	6 cut(s)	111, 546, 704, 927, 989, 1206
HpyCH4V	TGCA	7 cut(s)	628, 709, 1044, 1122, 1252, 1466, 1685
HpyF10VI	GCNNNNNNNGC	2 cut(s)	515, 631
HpyF3I	CTNAG	3 cut(s)	389, 460, 603
HpySE526I	ACGT	6 cut(s)	111, 546, 704, 927, 989, 1206
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	5 cut(s)	81, 643, 1432, 1643, 1750
Kpn2I	TCCGGA	2 cut(s)	1102, 1235
Ksp22I	TGATCA	1 cut(s)	1209
KspAI	GTTAAC	1 cut(s)	793
Kzo9I	GATC	2 cut(s)	901, 1209
LmnI	GCTCC	4 cut(s)	37, 65, 313, 1744
Lsp1109I	GCAGC	3 cut(s)	612, 1249, 1450
LweI	GCATC	1 cut(s)	1239
MaeI	CTAG	3 cut(s)	510, 857, 1496
MaeII	ACGT	6 cut(s)	111, 546, 704, 927, 989, 1206
MaeIII	GTNAC	3 cut(s)	80, 575, 1007
MalI	GATC	2 cut(s)	903, 1211
MboI	GATC	2 cut(s)	901, 1209
MboII	GAAGA	8 cut(s)	36, 203, 350, 409, 538, 703, 896, 1177
MhlI	GDGCHC	2 cut(s)	42, 1436
MlsI	TGGCCA	1 cut(s)	227
MluCI	AATT	9 cut(s)	429, 439, 594, 1109, 1339, 1442, 1455, 1467, 1570
MluNI	TGGCCA	1 cut(s)	227
MlyI	GAGTC	6 cut(s)	217, 349, 629, 670, 973, 1595
MmeI	TCCRAC	4 cut(s)	285, 695, 877, 1501
Mox20I	TGGCCA	1 cut(s)	227
MroI	TCCGGA	2 cut(s)	1102, 1235
MroXI	GAANNNNTTC	3 cut(s)	442, 1085, 1370
MscI	TGGCCA	1 cut(s)	227
MseI	TTAA	6 cut(s)	108, 242, 792, 843, 1058, 1569
Msp20I	TGGCCA	1 cut(s)	227
MspA1I	CMGCKG	1 cut(s)	1463
MspR9I	CCNGG	8 cut(s)	288, 435, 1021, 1179, 1291, 1378, 1606, 1743
MvaI	CCWGG	4 cut(s)	288, 1179, 1606, 1743
MwoI	GCNNNNNNNGC	2 cut(s)	515, 631
NciI	CCSGG	4 cut(s)	435, 1021, 1291, 1378
NdeII	GATC	2 cut(s)	901, 1209
NheI	GCTAGC	1 cut(s)	509
NlaIII	CATG	5 cut(s)	81, 643, 1432, 1643, 1750
NlaIV	GGNNCC	4 cut(s)	10, 39, 1330, 1619
NmuCI	GTSAC	1 cut(s)	80
NspI	RCATGY	1 cut(s)	1643
PaeR7I	CTCGAG	1 cut(s)	218
PcsI	WCGNNNNNNNCGW	1 cut(s)	671
PdmI	GAANNNNTTC	3 cut(s)	442, 1085, 1370
PflFI	GACNNNGTC	1 cut(s)	641
PfoI	TCCNGGA	4 cut(s)	286, 433, 1177, 1289
PinAI	ACCGGT	1 cut(s)	803
PkrI	GCNGC	3 cut(s)	627, 1264, 1465
PleI	GAGTC	6 cut(s)	216, 349, 628, 670, 972, 1595
PpsI	GAGTC	6 cut(s)	216, 349, 628, 670, 972, 1595
PshAI	GACNNNNGTC	1 cut(s)	988
Psp6I	CCWGG	4 cut(s)	286, 1177, 1604, 1741
PspGI	CCWGG	4 cut(s)	286, 1177, 1604, 1741
PspN4I	GGNNCC	4 cut(s)	10, 39, 1330, 1619
PspPI	GGNCC	5 cut(s)	8, 472, 781, 1094, 1114
PsrI	GAACNNNNNNTAC	2 cut(s)	857, 889
PsyI	GACNNNGTC	1 cut(s)	641
PvuII	CAGCTG	1 cut(s)	1463
RsaI	GTAC	1 cut(s)	545
RsaNI	GTAC	1 cut(s)	544
SaqAI	TTAA	6 cut(s)	108, 242, 792, 843, 1058, 1569
SatI	GCNGC	3 cut(s)	626, 1263, 1464
Sau3AI	GATC	2 cut(s)	901, 1209
Sau96I	GGNCC	5 cut(s)	8, 472, 781, 1094, 1114
SchI	GAGTC	6 cut(s)	217, 349, 629, 670, 973, 1595
ScrFI	CCNGG	8 cut(s)	288, 435, 1021, 1179, 1291, 1378, 1606, 1743
SduI	GDGCHC	2 cut(s)	42, 1436
SfaNI	GCATC	1 cut(s)	1239
Sfr274I	CTCGAG	1 cut(s)	218
SgrAI	CRCCGGYG	1 cut(s)	803
SinI	GGWCC	2 cut(s)	8, 781
SlaI	CTCGAG	1 cut(s)	218
SmlI	CTYRAG	9 cut(s)	218, 317, 365, 533, 833, 995, 1334, 1352, 1576
SmoI	CTYRAG	9 cut(s)	218, 317, 365, 533, 833, 995, 1334, 1352, 1576
SpeI	ACTAGT	1 cut(s)	856
Sse9I	AATT	9 cut(s)	429, 439, 594, 1109, 1339, 1442, 1455, 1467, 1570
SsiI	CCGC	1 cut(s)	362
SspI	AATATT	3 cut(s)	451, 467, 1398
SspMI	CTAG	3 cut(s)	510, 857, 1496
StyD4I	CCNGG	8 cut(s)	286, 433, 1019, 1177, 1289, 1376, 1604, 1741
TaaI	ACNGT	5 cut(s)	543, 590, 725, 1514, 1594
TaiI	ACGT	6 cut(s)	114, 549, 707, 930, 992, 1209
TaqI	TCGA	8 cut(s)	137, 219, 327, 585, 716, 1560, 1635, 1668
TasI	AATT	9 cut(s)	429, 439, 594, 1109, 1339, 1442, 1455, 1467, 1570
Tru1I	TTAA	6 cut(s)	108, 242, 792, 843, 1058, 1569
Tru9I	TTAA	6 cut(s)	108, 242, 792, 843, 1058, 1569
TscAI	CASTG	2 cut(s)	427, 1164
TseFI	GTSAC	1 cut(s)	80
TseI	GCWGC	3 cut(s)	625, 1262, 1463
Tsp45I	GTSAC	1 cut(s)	80
TspDTI	ATGAA	7 cut(s)	66, 228, 443, 883, 993, 1163, 1379
TspGWI	ACGGA	1 cut(s)	326
TspRI	CASTG	2 cut(s)	427, 1164
Tth111I	GACNNNGTC	1 cut(s)	641
VpaK11BI	GGWCC	2 cut(s)	8, 781
XapI	RAATTY	4 cut(s)	429, 594, 1339, 1455
XceI	RCATGY	1 cut(s)	1643
XhoI	CTCGAG	1 cut(s)	218
XmiI	GTMKAC	1 cut(s)	1710
XmnI	GAANNNNTTC	3 cut(s)	442, 1085, 1370
XspI	CTAG	3 cut(s)	510, 857, 1496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.