Rorug02G0230200

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
22897381 .. 22898175
795 bp
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UTR
Exon/CDS
Intron
Rorug02G0230200.1

Sequence Viewer

Length: 582 bp
ATGGTAGTGAAAATAAGAAGCAAGGAGGTTGAGATATGGGATAGTTTACCTGGTCGCACATGCAAAAAAACACGAGAGAATCTAGTTTATCATTTGCTAAATACACTGGATATGATATTTGATAATGAGATTATGATTCATTTCGATGAAGGATGCACATTCTCTTCATTTAAAATTTGTCATCCTGATTGTGTTCCAATACAACAAAATGGATTCGACTGTGGCATTTATATGCTAAAATTCATGGAGGATTATGAGAATGCATCCAAAGCAGGGGACAAGTATCATTCTGTGAATGAGCGTCTGCGCATAGCTCTCTCCTTGTTGAAGCATCCGGACAACCAAGCACGCAAAAATATTGCTGAAGCTAGACAAAGGTCACTACAAAAAGTTCTATGCAAGAAACGTGGACCACAGACGATGAAGACAAATGAGGACAGAGTAGCACATAGCGACACCGATGAAGGTTTGCAAAGGTCTCCAAAGAAAAAGAAGACAATCCAAGAAATAGATGCAACCAATGTGAACAAAAAAAGAGGTCGTGGTCGGCCTCGTGGCTCAAAGAATAAACTTAAGAAATAA

Protein Analysis

193

Amino Acids

22.35

Weight (kDa)

9.61

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C48 PF02902 2 - 84 4.1e-10 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75820
fragaria_vesca FvH4_2g38230 FvH4_2g38230
malus_domestica MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 308
AccIII TCCGGA 1 cut(s) 334
AcsI RAATTY 2 cut(s) 174, 239
AcuI CTGAAG 1 cut(s) 384
AfiI CCNNNNNNNGG 1 cut(s) 273
AflII CTTAAG 1 cut(s) 572
AgsI TTSAA 1 cut(s) 328
AjnI CCWGG 1 cut(s) 49
AluBI AGCT 2 cut(s) 314, 368
AluI AGCT 2 cut(s) 314, 368
Alw26I GTCTC 1 cut(s) 483
Aor13HI TCCGGA 1 cut(s) 334
AoxI GGCC 1 cut(s) 548
ApoI RAATTY 2 cut(s) 174, 239
AspLEI GCGC 1 cut(s) 309
AspS9I GGNCC 1 cut(s) 410
AvaII GGWCC 1 cut(s) 410
BauI CACGAG 2 cut(s) 72, 552
BbsI GAAGAC 2 cut(s) 431, 500
BciT130I CCWGG 1 cut(s) 51
BcoDI GTCTC 1 cut(s) 483
BfaI CTAG 2 cut(s) 83, 369
BfrI CTTAAG 1 cut(s) 572
Bme1390I CCNGG 1 cut(s) 51
Bme18I GGWCC 1 cut(s) 410
BmgT120I GGNCC 1 cut(s) 410
BmrFI CCNGG 1 cut(s) 51
BmsI GCATC 4 cut(s) 143, 272, 340, 502
BoxI GACNNNNGTC 1 cut(s) 376
BpiI GAAGAC 2 cut(s) 431, 500
BsaI GGTCTC 1 cut(s) 483
BsaWI WCCGGW 1 cut(s) 334
Bsc4I CCNNNNNNNGG 1 cut(s) 273
Bse1I ACTGG 1 cut(s) 111
BseAI TCCGGA 1 cut(s) 334
BseBI CCWGG 1 cut(s) 51
BseGI GGATG 4 cut(s) 158, 181, 263, 331
BseLI CCNNNNNNNGG 1 cut(s) 273
BseNI ACTGG 1 cut(s) 111
BshFI GGCC 1 cut(s) 550
BsiSI CCGG 1 cut(s) 335
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 1 cut(s) 273
BsmAI GTCTC 1 cut(s) 483
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 1 cut(s) 265
BsnI GGCC 1 cut(s) 550
Bso31I GGTCTC 1 cut(s) 483
Bsp13I TCCGGA 1 cut(s) 334
BspANI GGCC 1 cut(s) 550
BspEI TCCGGA 1 cut(s) 334
BspTI CTTAAG 1 cut(s) 572
BspTNI GGTCTC 1 cut(s) 483
BsrI ACTGG 1 cut(s) 111
BssSI CACGAG 2 cut(s) 72, 552
Bst2BI CACGAG 2 cut(s) 72, 552
Bst2UI CCWGG 1 cut(s) 51
Bst4CI ACNGT 1 cut(s) 221
Bst6I CTCTTC 1 cut(s) 169
BstAFI CTTAAG 1 cut(s) 572
BstC8I GCNNGC 1 cut(s) 349
BstF5I GGATG 4 cut(s) 158, 181, 263, 331
BstHHI GCGC 1 cut(s) 309
BstMAI GTCTC 1 cut(s) 483
BstMWI GCNNNNNNNGC 1 cut(s) 269
BstNI CCWGG 1 cut(s) 51
BstNSI RCATGY 1 cut(s) 63
BstPAI GACNNNNGTC 1 cut(s) 376
BstSCI CCNGG 1 cut(s) 49
BstV2I GAAGAC 2 cut(s) 431, 500
BsuRI GGCC 1 cut(s) 550
BtsCI GGATG 4 cut(s) 158, 181, 263, 331
BtsIMutI CAGTG 1 cut(s) 104
Cac8I GCNNGC 1 cut(s) 349
CfoI GCGC 1 cut(s) 309
Cfr13I GGNCC 1 cut(s) 410
CseI GACGC 1 cut(s) 290
CsiI ACCWGGT 1 cut(s) 49
CspCI CAANNNNNGTGG 2 cut(s) 388, 423
CviAII CATG 2 cut(s) 60, 244
CviJI RGCY 4 cut(s) 314, 368, 550, 558
CviKI_1 RGCY 4 cut(s) 314, 368, 550, 558
DraI TTTAAA 1 cut(s) 172
Eam1104I CTCTTC 1 cut(s) 169
EarI CTCTTC 1 cut(s) 169
Eco31I GGTCTC 1 cut(s) 483
Eco47I GGWCC 1 cut(s) 410
Eco57I CTGAAG 1 cut(s) 384
EcoRII CCWGG 1 cut(s) 49
EcoT22I ATGCAT 1 cut(s) 265
FaeI CATG 2 cut(s) 63, 247
FaqI GGGAC 1 cut(s) 290
FatI CATG 2 cut(s) 59, 243
FokI GGATG 4 cut(s) 165, 168, 250, 318
FspBI CTAG 2 cut(s) 83, 369
FspI TGCGCA 1 cut(s) 308
GlaI GCGC 1 cut(s) 308
HaeIII GGCC 1 cut(s) 550
HapII CCGG 1 cut(s) 335
HgaI GACGC 1 cut(s) 290
HhaI GCGC 1 cut(s) 309
Hin1II CATG 2 cut(s) 63, 247
Hin6I GCGC 1 cut(s) 307
HinP1I GCGC 1 cut(s) 307
HinfI GANTC 3 cut(s) 79, 136, 213
HpaII CCGG 1 cut(s) 335
Hpy166II GTNNAC 3 cut(s) 47, 410, 526
Hpy188III TCNNGA 2 cut(s) 185, 335
Hpy8I GTNNAC 3 cut(s) 47, 410, 526
HpyAV CCTTC 2 cut(s) 143, 458
HpyCH4III ACNGT 1 cut(s) 221
HpyCH4IV ACGT 1 cut(s) 406
HpyCH4V TGCA 6 cut(s) 63, 156, 263, 399, 472, 515
HpyF10VI GCNNNNNNNGC 1 cut(s) 269
HpySE526I ACGT 1 cut(s) 406
Hsp92II CATG 2 cut(s) 63, 247
HspAI GCGC 1 cut(s) 307
Kpn2I TCCGGA 1 cut(s) 334
LpnPI CCDG 6 cut(s) 36, 63, 92, 198, 258, 348
LweI GCATC 4 cut(s) 143, 272, 340, 502
MabI ACCWGGT 1 cut(s) 49
MaeI CTAG 2 cut(s) 83, 369
MaeII ACGT 1 cut(s) 406
MaeIII GTNAC 1 cut(s) 378
MboII GAAGA 3 cut(s) 156, 436, 505
MluCI AATT 2 cut(s) 174, 239
MnlI CCTC 5 cut(s) 19, 241, 427, 530, 561
Mph1103I ATGCAT 1 cut(s) 265
MroI TCCGGA 1 cut(s) 334
MseI TTAA 2 cut(s) 171, 573
MslI CAYNNNNRTG 2 cut(s) 144, 230
MspCI CTTAAG 1 cut(s) 572
MspI CCGG 1 cut(s) 335
MspR9I CCNGG 1 cut(s) 51
Mva1269I GAATGC 1 cut(s) 265
MvaI CCWGG 1 cut(s) 51
MwoI GCNNNNNNNGC 1 cut(s) 269
NlaIII CATG 2 cut(s) 63, 247
NmuCI GTSAC 1 cut(s) 378
NsbI TGCGCA 1 cut(s) 308
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 1 cut(s) 63
PctI GAATGC 1 cut(s) 265
PfeI GAWTC 3 cut(s) 79, 136, 213
PshAI GACNNNNGTC 1 cut(s) 376
Psp6I CCWGG 1 cut(s) 49
PspGI CCWGG 1 cut(s) 49
PspPI GGNCC 1 cut(s) 410
RseI CAYNNNNRTG 2 cut(s) 144, 230
SaqAI TTAA 2 cut(s) 171, 573
Sau96I GGNCC 1 cut(s) 410
ScrFI CCNGG 1 cut(s) 51
SetI ASST 9 cut(s) 30, 52, 316, 370, 380, 409, 469, 479, 541
SexAI ACCWGGT 1 cut(s) 49
SfaNI GCATC 4 cut(s) 143, 272, 340, 502
SinI GGWCC 1 cut(s) 410
SmiMI CAYNNNNRTG 2 cut(s) 144, 230
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 2 cut(s) 174, 239
SspI AATATT 1 cut(s) 358
SspMI CTAG 2 cut(s) 83, 369
StyD4I CCNGG 1 cut(s) 49
TaaI ACNGT 1 cut(s) 221
TaiI ACGT 1 cut(s) 409
TaqI TCGA 2 cut(s) 144, 216
TasI AATT 2 cut(s) 174, 239
TfiI GAWTC 3 cut(s) 79, 136, 213
Tru1I TTAA 2 cut(s) 171, 573
Tru9I TTAA 2 cut(s) 171, 573
TscAI CASTG 1 cut(s) 111
TseFI GTSAC 1 cut(s) 378
Tsp45I GTSAC 1 cut(s) 378
TspDTI ATGAA 6 cut(s) 128, 156, 162, 232, 437, 477
TspRI CASTG 1 cut(s) 111
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 1 cut(s) 410
XapI RAATTY 2 cut(s) 174, 239
XceI RCATGY 1 cut(s) 63
XspI CTAG 2 cut(s) 83, 369
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.