Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

47097982 .. 47103519

Gene Structure 5538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0319400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1638 bp

ATGGAGGAGTCTCTGCGAATTCGAAGATTGGAGGAAGTTCCTCCGGCCAAAGACTTCACCGCTCGGATTGAATCCAGGAATATTCCGGCGGTTATCAAGGGCTGCGTTAAAGATTGGGAAGCTGTTTCCAAGTGGAATCCATCGAATGGCGGCCTGGAATATTTGCAGGAACGAGTCGGATTGTGTGTTGTGGAGGCTATGCTATCTAGTTTCGCACCTGTCTTCTACGGCGATCTTAGAAGTCATGAGAGGGTACCACTGCCATTTTCTGCCTTCATTCGTCTATGTAGACTACGCATGCATCATGCAGAGGATGGTTCTGGTGCTTATTCTGAATCGGAACAGACTGGGCTGCTAGGGCCTGAATCTGAGCATGACTGTAAGCCCTATGAGGATGCTCCTCAACAAATCTATTTAGCACAGGTACCGATAATCAGTACTGAAAATGAAGAGAGGGTTCAGTTGGAAACTTTGAGGGAAGATATTCAAATGCCTGCATTTTTGGAGGATAAATCACTAATTTCTGTCAACCTCTGGATGAACAATGCTCAAGCTAGATCAAGCACTCACTATGATCCACACCATAACCTTCTCTGCATAGTTTCTGGCTGTAAACAAGTGGTTTTATGGCCTCCTTCAGCAACTCTGGTGTTATACCCTATGCCAATATATGGGGAGGCATCAAATCATAGTTCTGTTCCTTTAGACAACCTTGACTTTTCAAATTATCCAAGAGCAGAATCTTCAATGGAGTACTCGCAGAAGGTTATTCTTCATGCAGGGGATGCACTATTTATTCCTGAAGGCTGGTTCCACCAGGTGGATAGTGATGATCTGACAATCGCTGTCAACTTTTGGTGGCAATCAAACATAATGTCAAGCATGTCAGAACACATGGATGCATATTATTTGCGCATACTATTAAGAAGAATGACAGTTCGAGAAATGAACCAAGTGCTACCTAAAGCGTCTTTAGTGGAAATGGCGAACACAAAGAGGCATGCATGTAAGCTGCTTAATAACGGACAAGTAGATCAGAATGACAAGGATTTGGATCAGGCGAGTGAGAGGAAGGATCTTGAAGGAAAGGAGCTGAAGCAAGAAACTACTTTGCATGAACTGGAACCGGTTGCCGTCCATGCTCTTCATGAACTTGTTTCTTTAGTTCACAGTCATGTCAATGCCGCAGAGCAAAGACAACCGGAGCAATCCACTTCAAGAACTGATTCTGCACTCAATGTCAAGGACAAGGGTAACAAAGTTGTGAGAGTGCATGCATTTAGTTTGGAAGATGACCCAGTTGCTAACATTATTTGGACTCTTCCGCCATGCACTCTTCAACGCGTACTTCTTGCCATGGTGAAAAGTTTTCCAAGAACTTTGGAGGCTTTAATACTGCACATGCTTACACCAGTGGGAGCAGAAGTGCTTACACGTAAATTTGAAGAAATGGATGACCTGAACACCAAGGAAGATCGGAACAGATTTTACCAAGTTTTCTATGAATCATTCAACGACCAATTTGCTGCAATGGATGCAATTCTGAATGGAAAGGAATTATTTGCCCTCCAGGCATACAAGAATGTGTTAGATAAGAACATAGGAGTAGATTGGGGTGGGCCAAAACCAGTTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

545

Amino Acids

61.95

Weight (kDa)

5.26

Isoelectric Point (pI)

55.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_8	PF13621	18 - 290	8.4e-52	Cupin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	914
Acc65I	GGTACC	2 cut(s)	253, 424
AccB1I	GGYRCC	2 cut(s)	253, 424
AccB7I	CCANNNNNTGG	3 cut(s)	146, 671, 820
AccBSI	CCGCTC	1 cut(s)	62
AccI	GTMKAC	1 cut(s)	289
AccII	CGCG	1 cut(s)	1344
AciI	CCGC	5 cut(s)	60, 89, 150, 1185, 1325
AclWI	GGATC	3 cut(s)	569, 1062, 1083
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	2 cut(s)	18, 1439
AcuI	CTGAAG	3 cut(s)	621, 822, 1115
AdeI	CACNNNGTG	1 cut(s)	820
AfaI	GTAC	5 cut(s)	255, 426, 439, 755, 1347
AfiI	CCNNNNNNNGG	3 cut(s)	146, 671, 820
AflIII	ACRYGT	2 cut(s)	1342, 1433
AgeI	ACCGGT	1 cut(s)	1126
AgsI	TTSAA	9 cut(s)	71, 488, 723, 747, 1082, 1218, 1340, 1445, 1513
AjnI	CCWGG	4 cut(s)	74, 153, 816, 1569
AluBI	AGCT	4 cut(s)	122, 554, 1012, 1093
AluI	AGCT	4 cut(s)	122, 554, 1012, 1093
Alw26I	GTCTC	1 cut(s)	15
AlwI	GGATC	3 cut(s)	569, 1062, 1083
AoxI	GGCC	5 cut(s)	45, 151, 359, 629, 1619
ApeKI	GCWGC	4 cut(s)	102, 352, 1012, 1526
ApoI	RAATTY	2 cut(s)	18, 1439
ArsI	GACNNNNNNTTYG	2 cut(s)	860, 892
AsiGI	ACCGGT	1 cut(s)	1126
Asp700I	GAANNNNTTC	2 cut(s)	483, 1225
Asp718I	GGTACC	2 cut(s)	253, 424
AspLEI	GCGC	1 cut(s)	915
AspS9I	GGNCC	2 cut(s)	359, 1619
AsuHPI	GGTGA	2 cut(s)	49, 1372
AsuII	TTCGAA	1 cut(s)	22
BanI	GGYRCC	2 cut(s)	253, 424
BbsI	GAAGAC	1 cut(s)	214
BbvI	GCAGC	4 cut(s)	89, 339, 999, 1513
BccI	CCATC	2 cut(s)	148, 308
BceAI	ACGGC	2 cut(s)	244, 1118
BcgI	CGANNNNNNTGC	2 cut(s)	1505, 1539
BciT130I	CCWGG	4 cut(s)	76, 155, 818, 1571
BcoDI	GTCTC	1 cut(s)	15
BfaI	CTAG	3 cut(s)	207, 356, 555
BglI	GCCNNNNNGGC	1 cut(s)	1571
BisI	GCNGC	6 cut(s)	103, 151, 353, 1013, 1185, 1527
BlsI	GCNGC	6 cut(s)	104, 152, 354, 1014, 1186, 1528
BmcAI	AGTACT	2 cut(s)	439, 755
Bme1390I	CCNGG	4 cut(s)	76, 155, 818, 1571
BmgT120I	GGNCC	2 cut(s)	359, 1619
BmiI	GGNNCC	4 cut(s)	255, 426, 812, 1125
BmrFI	CCNGG	4 cut(s)	76, 155, 818, 1571
BmrI	ACTGGG	2 cut(s)	357, 1292
BmsI	GCATC	6 cut(s)	310, 385, 689, 775, 889, 1525
BmuI	ACTGGG	2 cut(s)	357, 1292
BpiI	GAAGAC	1 cut(s)	214
BpmI	CTGGAG	1 cut(s)	1553
Bpu14I	TTCGAA	1 cut(s)	22
BpuEI	CTTGAG	1 cut(s)	534
BsaAI	YACGTR	1 cut(s)	1436
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaJI	CCNNGG	2 cut(s)	1356, 1467
BsaWI	WCCGGW	2 cut(s)	1126, 1201
BsaXI	ACNNNNNCTCC	2 cut(s)	1410, 1440
Bsc4I	CCNNNNNNNGG	3 cut(s)	146, 671, 820
Bse118I	RCCGGY	1 cut(s)	1126
Bse1I	ACTGG	5 cut(s)	352, 1125, 1298, 1412, 1628
Bse3DI	GCAATG	1 cut(s)	1536
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	4 cut(s)	76, 155, 818, 1571
BseDI	CCNNGG	2 cut(s)	1356, 1467
BseGI	GGATG	7 cut(s)	319, 400, 543, 790, 904, 1459, 1540
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	3 cut(s)	146, 671, 820
BseMI	GCAATG	1 cut(s)	1536
BseMII	CTCAG	1 cut(s)	360
BseNI	ACTGG	5 cut(s)	352, 1125, 1298, 1412, 1628
BseRI	GAGGAG	2 cut(s)	20, 390
BseXI	GCAGC	4 cut(s)	89, 339, 999, 1513
BsgI	GTGCAG	2 cut(s)	1215, 1382
Bsh1236I	CGCG	1 cut(s)	1344
BshFI	GGCC	5 cut(s)	47, 153, 361, 631, 1621
BshNI	GGYRCC	2 cut(s)	253, 424
BshTI	ACCGGT	1 cut(s)	1126
BsiSI	CCGG	4 cut(s)	44, 86, 1127, 1202
BslI	CCNNNNNNNGG	3 cut(s)	146, 671, 820
BsmAI	GTCTC	1 cut(s)	15
BsnI	GGCC	5 cut(s)	47, 153, 361, 631, 1621
Bsp119I	TTCGAA	1 cut(s)	22
Bsp143I	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
Bsp19I	CCATGG	1 cut(s)	1356
BspACI	CCGC	5 cut(s)	60, 89, 150, 1185, 1325
BspANI	GGCC	5 cut(s)	47, 153, 361, 631, 1621
BspCNI	CTCAG	1 cut(s)	361
BspFNI	CGCG	1 cut(s)	1344
BspHI	TCATGA	2 cut(s)	244, 1147
BspLI	GGNNCC	4 cut(s)	255, 426, 812, 1125
BspPI	GGATC	3 cut(s)	569, 1062, 1083
BspQI	GCTCTTC	1 cut(s)	1149
BspT104I	TTCGAA	1 cut(s)	22
BspT107I	GGYRCC	2 cut(s)	253, 424
BsrBI	CCGCTC	1 cut(s)	62
BsrDI	GCAATG	1 cut(s)	1536
BsrFI	RCCGGY	1 cut(s)	1126
BsrI	ACTGG	5 cut(s)	352, 1125, 1298, 1412, 1628
BssAI	RCCGGY	1 cut(s)	1126
BssECI	CCNNGG	2 cut(s)	1356, 1467
BssMI	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
BssT1I	CCWWGG	2 cut(s)	1356, 1467
Bst2UI	CCWGG	4 cut(s)	76, 155, 818, 1571
Bst4CI	ACNGT	3 cut(s)	380, 937, 1172
Bst6I	CTCTTC	4 cut(s)	444, 1149, 1326, 1341
BstAPI	GCANNNNNTGC	2 cut(s)	785, 1535
BstBAI	YACGTR	1 cut(s)	1436
BstBI	TTCGAA	1 cut(s)	22
BstC8I	GCNNGC	4 cut(s)	299, 495, 1002, 1275
BstDEI	CTNAG	2 cut(s)	236, 369
BstDSI	CCRYGG	1 cut(s)	1356
BstF5I	GGATG	7 cut(s)	319, 400, 543, 790, 904, 1459, 1540
BstFNI	CGCG	1 cut(s)	1344
BstHHI	GCGC	1 cut(s)	915
BstKTI	GATC	8 cut(s)	235, 560, 577, 835, 1036, 1057, 1078, 1477
BstMAI	GTCTC	1 cut(s)	15
BstMBI	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
BstMWI	GCNNNNNNNGC	5 cut(s)	358, 785, 1139, 1535, 1571
BstNI	CCWGG	4 cut(s)	76, 155, 818, 1571
BstNSI	RCATGY	6 cut(s)	301, 886, 1004, 1008, 1277, 1405
BstSCI	CCNGG	4 cut(s)	74, 153, 816, 1569
BstUI	CGCG	1 cut(s)	1344
BstV1I	GCAGC	4 cut(s)	89, 339, 999, 1513
BstV2I	GAAGAC	1 cut(s)	214
BstX2I	RGATCY	1 cut(s)	1075
BstYI	RGATCY	1 cut(s)	1075
BsuRI	GGCC	5 cut(s)	47, 153, 361, 631, 1621
BtgI	CCRYGG	1 cut(s)	1356
BtsCI	GGATG	7 cut(s)	319, 400, 543, 790, 904, 1459, 1540
BtsI	GCAGTG	1 cut(s)	257
BtsIMutI	CAGTG	2 cut(s)	257, 1419
Cac8I	GCNNGC	4 cut(s)	299, 495, 1002, 1275
CciI	TCATGA	2 cut(s)	244, 1147
CfoI	GCGC	1 cut(s)	915
Cfr10I	RCCGGY	1 cut(s)	1126
Cfr13I	GGNCC	2 cut(s)	359, 1619
CseI	GACGC	1 cut(s)	957
CsiI	ACCWGGT	1 cut(s)	816
Csp6I	GTAC	5 cut(s)	254, 425, 438, 754, 1346
CspAI	ACCGGT	1 cut(s)	1126
CviQI	GTAC	5 cut(s)	254, 425, 438, 754, 1346
DdeI	CTNAG	2 cut(s)	236, 369
DpnI	GATC	8 cut(s)	234, 559, 576, 834, 1035, 1056, 1077, 1476
DpnII	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
DraIII	CACNNNGTG	1 cut(s)	820
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	4 cut(s)	444, 1149, 1326, 1341
EarI	CTCTTC	4 cut(s)	444, 1149, 1326, 1341
EciI	GGCGGA	1 cut(s)	1314
Eco130I	CCWWGG	2 cut(s)	1356, 1467
Eco57I	CTGAAG	3 cut(s)	621, 822, 1115
EcoO109I	RGGNCCY	1 cut(s)	359
EcoRI	GAATTC	1 cut(s)	18
EcoRII	CCWGG	4 cut(s)	74, 153, 816, 1569
EcoT14I	CCWWGG	2 cut(s)	1356, 1467
EcoT22I	ATGCAT	4 cut(s)	303, 904, 1006, 1279
ErhI	CCWWGG	2 cut(s)	1356, 1467
FblI	GTMKAC	1 cut(s)	289
Fnu4HI	GCNGC	6 cut(s)	103, 151, 353, 1013, 1185, 1527
FokI	GGATG	7 cut(s)	326, 407, 550, 797, 911, 1466, 1547
Fsp4HI	GCNGC	6 cut(s)	103, 151, 353, 1013, 1185, 1527
FspBI	CTAG	3 cut(s)	207, 356, 555
FspI	TGCGCA	1 cut(s)	914
GlaI	GCGC	1 cut(s)	914
GluI	GCNGC	6 cut(s)	103, 151, 353, 1013, 1185, 1527
GsuI	CTGGAG	1 cut(s)	1553
HaeIII	GGCC	5 cut(s)	47, 153, 361, 631, 1621
HapII	CCGG	4 cut(s)	44, 86, 1127, 1202
HgaI	GACGC	1 cut(s)	957
HhaI	GCGC	1 cut(s)	915
Hin6I	GCGC	1 cut(s)	913
HinP1I	GCGC	1 cut(s)	913
HincII	GTYRAC	2 cut(s)	529, 850
HindII	GTYRAC	2 cut(s)	529, 850
HpaII	CCGG	4 cut(s)	44, 86, 1127, 1202
HphI	GGTGA	2 cut(s)	49, 1372
Hpy166II	GTNNAC	5 cut(s)	290, 529, 614, 850, 1168
Hpy188III	TCNNGA	7 cut(s)	245, 535, 800, 941, 1079, 1148, 1218
Hpy8I	GTNNAC	5 cut(s)	290, 529, 614, 850, 1168
HpyAV	CCTTC	7 cut(s)	283, 599, 645, 757, 797, 1066, 1076
HpyCH4III	ACNGT	3 cut(s)	380, 937, 1172
HpyCH4IV	ACGT	1 cut(s)	1435
HpyF10VI	GCNNNNNNNGC	5 cut(s)	358, 785, 1139, 1535, 1571
HpyF3I	CTNAG	2 cut(s)	236, 369
HpySE526I	ACGT	1 cut(s)	1435
HspAI	GCGC	1 cut(s)	913
KpnI	GGTACC	2 cut(s)	257, 428
Kzo9I	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
LguI	GCTCTTC	1 cut(s)	1149
LmnI	GCTCC	4 cut(s)	403, 1090, 1204, 1418
Lsp1109I	GCAGC	4 cut(s)	89, 339, 999, 1513
LweI	GCATC	6 cut(s)	310, 385, 689, 775, 889, 1525
MabI	ACCWGGT	1 cut(s)	816
MaeI	CTAG	3 cut(s)	207, 356, 555
MaeII	ACGT	1 cut(s)	1435
MaeIII	GTNAC	1 cut(s)	1253
MalI	GATC	8 cut(s)	234, 559, 576, 834, 1035, 1056, 1077, 1476
MbiI	CCGCTC	1 cut(s)	62
MboI	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
MflI	RGATCY	1 cut(s)	1075
MluCI	AATT	7 cut(s)	18, 519, 724, 1439, 1520, 1539, 1556
MluI	ACGCGT	1 cut(s)	1342
MlyI	GAGTC	3 cut(s)	17, 183, 1312
MmeI	TCCRAC	2 cut(s)	157, 444
Mph1103I	ATGCAT	4 cut(s)	303, 904, 1006, 1279
MroXI	GAANNNNTTC	2 cut(s)	483, 1225
MseI	TTAA	4 cut(s)	108, 923, 1017, 1391
MslI	CAYNNNNRTG	3 cut(s)	897, 1173, 1179
MspI	CCGG	4 cut(s)	44, 86, 1127, 1202
MspR9I	CCNGG	4 cut(s)	76, 155, 818, 1571
MvaI	CCWGG	4 cut(s)	76, 155, 818, 1571
MvnI	CGCG	1 cut(s)	1344
MwoI	GCNNNNNNNGC	5 cut(s)	358, 785, 1139, 1535, 1571
NcoI	CCATGG	1 cut(s)	1356
NdeII	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
NlaIV	GGNNCC	4 cut(s)	255, 426, 812, 1125
NsbI	TGCGCA	1 cut(s)	914
NsiI	ATGCAT	4 cut(s)	303, 904, 1006, 1279
NspI	RCATGY	6 cut(s)	301, 886, 1004, 1008, 1277, 1405
NspV	TTCGAA	1 cut(s)	22
PaeI	GCATGC	3 cut(s)	301, 1004, 1277
PagI	TCATGA	2 cut(s)	244, 1147
PciSI	GCTCTTC	1 cut(s)	1149
PdmI	GAANNNNTTC	2 cut(s)	483, 1225
PfeI	GAWTC	7 cut(s)	71, 136, 335, 365, 740, 1226, 1505
PflMI	CCANNNNNTGG	3 cut(s)	146, 671, 820
PfoI	TCCNGGA	1 cut(s)	74
PinAI	ACCGGT	1 cut(s)	1126
PkrI	GCNGC	6 cut(s)	104, 152, 354, 1014, 1186, 1528
PleI	GAGTC	3 cut(s)	16, 182, 1312
PpsI	GAGTC	3 cut(s)	16, 182, 1312
Ppu21I	YACGTR	1 cut(s)	1436
Psp6I	CCWGG	4 cut(s)	74, 153, 816, 1569
PspGI	CCWGG	4 cut(s)	74, 153, 816, 1569
PspN4I	GGNNCC	4 cut(s)	255, 426, 812, 1125
PspPI	GGNCC	2 cut(s)	359, 1619
PsrI	GAACNNNNNNTAC	2 cut(s)	1472, 1504
PsuI	RGATCY	1 cut(s)	1075
RsaI	GTAC	5 cut(s)	255, 426, 439, 755, 1347
RsaNI	GTAC	5 cut(s)	254, 425, 438, 754, 1346
RseI	CAYNNNNRTG	3 cut(s)	897, 1173, 1179
SapI	GCTCTTC	1 cut(s)	1149
SaqAI	TTAA	4 cut(s)	108, 923, 1017, 1391
SatI	GCNGC	6 cut(s)	103, 151, 353, 1013, 1185, 1527
Sau3AI	GATC	8 cut(s)	232, 557, 574, 832, 1033, 1054, 1075, 1474
Sau96I	GGNCC	2 cut(s)	359, 1619
ScaI	AGTACT	2 cut(s)	439, 755
SchI	GAGTC	3 cut(s)	17, 183, 1312
ScrFI	CCNGG	4 cut(s)	76, 155, 818, 1571
SexAI	ACCWGGT	1 cut(s)	816
SfaNI	GCATC	6 cut(s)	310, 385, 689, 775, 889, 1525
SfuI	TTCGAA	1 cut(s)	22
SmiMI	CAYNNNNRTG	3 cut(s)	897, 1173, 1179
SmlI	CTYRAG	1 cut(s)	549
SmoI	CTYRAG	1 cut(s)	549
SphI	GCATGC	3 cut(s)	301, 1004, 1277
Sse9I	AATT	7 cut(s)	18, 519, 724, 1439, 1520, 1539, 1556
SsiI	CCGC	5 cut(s)	60, 89, 150, 1185, 1325
SspI	AATATT	2 cut(s)	82, 161
SspMI	CTAG	3 cut(s)	207, 356, 555
StyD4I	CCNGG	4 cut(s)	74, 153, 816, 1569
StyI	CCWWGG	2 cut(s)	1356, 1467
TaaI	ACNGT	3 cut(s)	380, 937, 1172
TaiI	ACGT	1 cut(s)	1438
TaqI	TCGA	3 cut(s)	22, 143, 940
TasI	AATT	7 cut(s)	18, 519, 724, 1439, 1520, 1539, 1556
TatI	WGTACW	2 cut(s)	437, 753
TauI	GCSGC	2 cut(s)	153, 1187
TfiI	GAWTC	7 cut(s)	71, 136, 335, 365, 740, 1226, 1505
Tru1I	TTAA	4 cut(s)	108, 923, 1017, 1391
Tru9I	TTAA	4 cut(s)	108, 923, 1017, 1391
TscAI	CASTG	2 cut(s)	264, 1419
TseI	GCWGC	4 cut(s)	102, 352, 1012, 1526
TspDTI	ATGAA	9 cut(s)	265, 462, 554, 764, 962, 1131, 1136, 1164, 1518
TspGWI	ACGGA	1 cut(s)	1038
TspRI	CASTG	2 cut(s)	264, 1419
Van91I	CCANNNNNTGG	3 cut(s)	146, 671, 820
XapI	RAATTY	2 cut(s)	18, 1439
XceI	RCATGY	6 cut(s)	301, 886, 1004, 1008, 1277, 1405
XmiI	GTMKAC	1 cut(s)	289
XmnI	GAANNNNTTC	2 cut(s)	483, 1225
XspI	CTAG	3 cut(s)	207, 356, 555
ZrmI	AGTACT	2 cut(s)	439, 755
Zsp2I	ATGCAT	4 cut(s)	303, 904, 1006, 1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.