Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Forward (+)

36389854 .. 36401654

Gene Structure 11801 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG303500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGGTTCAGGGCTGGAGGACTGGGAGCCCTCTTCTCACCACTACTGCTCCTTCTCTGGAGTTTCATGTGACCAGCAATCACGAGTTGCATGTGGCTCTTAACGTGTCCAGTTTGCTTCTGTCTGGCTCGATTCCAGCAGAGATTGGGCTTCTGAACAAGCTCATCAACCTCACCATTGCTGACACCAACTTGACAGGGAGTCTTCCCCTCGAGATGGCCAACCTGACTTCATTAAAGCTTTTGAACATCTCCAACAGCGACCTCAATGGGAGTTTTCCTGGAGAAATCATACTCCGAATGACGGAGCTTGAGGTTCTCGACGCCTACAACAACGACTTTTTAGGGACTCTTCCGCTTGAGATTGCCAGTCTCAAAAAGCTCAGATATCTACATCTTGGCGATAGCTTCTTCACTGGAGAAATTCCCGGAAATTATTCAAATATTCATAGTTTAGAATATTTGGCCCTCAACGATAACTTCCTTGCCGGAAAAGTTCCGGCTAGCTTGGCTGGGTTGAAGAATCTCAAGAAACTGTACGTCGGGAATGTTAGAATCTCAATAAACTGTAACAAGTTCGACGGTGGAATTCCACCTGAGTTGGGAATGTTAGAGTCGCTGCAAGTGCTTGACATGGTCGGCTGTAAGCTCTCCGGCACGATTCCGACGACTCTGGGCTTTTTGAAGAACTTACACACGTTGCATATATCGAATAACAGTTTGAGTGGTAATATACCTCCAGAACTTTCGGATATGGTAAACCTGATGAGTTTGGACCTCTCTGTTAACAAACTCACCGCTGAAATACCAGAGAGTTTCTCAAAGCTCAAGAACCTTAAACTTCTCCAACTAGTTGGGAACAACCTCTACGGCCAGATACCCAACTTCATTGGTGATCTTCCTCATCTGGAGGCGTTTGACGTTGGGGGCAACAACTTCACATTTGCTCTACCGGAGAGTCTTGGCCGGAATGAAAGACTTACGTCCCTCAAGGTATCCGGTAACCACCTTACCGGGTTGATTCCTCGGGATTTGTGCAAAGGAGGGAGGTTAAGGGAGTTGATTCTGAAGGAGAACCACTTCTTTGGGCCGATTCCGGAGGAATTGGGCCGGTGCAAGTCGCTTGTGGATATCCTATTGATGAAAAACACACTGAATGGGACTATTCCTCCTGGAATCTTCAGCTTACCTGATGTGAACGTGATCAACTTCAACGATAACCACTTGTCCGGAGAACTTCCGATGCAGATGTCGGCTGCCTCACTTGAATTCCTCACACTCACCCGGAATCAGATTTCTGGAAAAATCCCATCCACCATCGGAACCCTCAAGAATTTACAGAAGCTTGAGCTGGCTATGAACAGATTCTCCGGGCAAGTTCCAAAAGAAATATTCAGTTTACAATCGTTATACATACTCAACATGAGCACCAACAAATTCGGAGGCCTCAATAGTATCGGGCTCACCGGAAAGTTCCCTTCCATCTTGGCTCGGTTGAAGAATGTCAAGGAATTGCATATGGTCTATAACAAATTCGATGGTGGACTTCCTGAGTTGGGAATGATGGAGTCGTTGCAAGTGCTTGACATGATTAACCATTTCAGTGGTTATATACTTCCACAACTTTCAGGTATGGTGAGTCTGACGGCTTTGGATCTCTCTCTTAACAAACTCACCGGAGAAATACCAGAAAGTCTCTCGGAGCTCAAGAACCTTGCCCTTCTCAACATGTGTGAAAACAATCTCAACGGGACTATTCCTGCTGGAATCTTCAGCTTTCCTTATGTGAACAGAATTGAGCTCAATGATAATTACTTGTCCGGAGAACTCCCGATGCAGATGCCTAGTGCCTGGCTTGAAACCCTCATTCTTTCTAATAATCAAATTTCTGGAAGAATTCCATCAACCATTGGAAATCTTCACCGTTTACAAATTCTTGATCTGGAAATGAATAGATTCTCTGGGCAAGTACCAGAGGAAATCTTCAATTTACAGCGGCTAGAGGCACTCTACATCGGGACCAACAATTTTGGTTGTTGGTATGCATATACCTCCCAGGCGCAAGTATCGGAAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

691

Amino Acids

75.81

Weight (kDa)

5.61

Isoelectric Point (pI)

31.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	121 - 237	1.7e-10	Leucine-rich repeat region
LRR_14	PF23598	196 - 283	4.1e-07	Leucine-rich repeat region
LRR_8	PF13855	229 - 288	1.7e-07	Leucine rich repeat
LRR_14	PF23598	420 - 529	2.8e-07	Leucine-rich repeat region
LRR_14	PF23598	458 - 619	5e-07	Leucine-rich repeat region
LRR_4	PF12799	618 - 650	9.6e-06	Leucine Rich repeats (2 copies)
LRR_8	PF13855	618 - 676	2.4e-06	Leucine rich repeat
LRR_14	PF23598	621 - 673	8.4e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	3 cut(s)	1093, 1226, 1817
AciI	CCGC	3 cut(s)	353, 795, 1993
AclWI	GGATC	1 cut(s)	1659
AcoI	YGGCCR	3 cut(s)	216, 868, 961
AcsI	RAATTY	9 cut(s)	420, 585, 1265, 1330, 1433, 1529, 1881, 1893, 1929
AcuI	CTGAAG	3 cut(s)	1085, 1162, 1753
AcyI	GRCGYC	1 cut(s)	321
AfaI	GTAC	2 cut(s)	536, 1968
AfiI	CCNNNNNNNGG	4 cut(s)	214, 301, 599, 1553
AflIII	ACRYGT	3 cut(s)	102, 693, 1725
AgsI	TTSAA	9 cut(s)	244, 438, 517, 682, 1210, 1265, 1495, 1856, 1984
AhdI	GACNNNNNGTC	1 cut(s)	198
AhlI	ACTAGT	1 cut(s)	847
AjnI	CCWGG	4 cut(s)	277, 1168, 1847, 2052
AloI	GAACNNNNNNTCC	2 cut(s)	1349, 1381
Alw21I	GWGCWC	3 cut(s)	1427, 1704, 1800
Alw26I	GTCTC	2 cut(s)	374, 1697
AlwI	GGATC	1 cut(s)	1659
Ama87I	CYCGRG	2 cut(s)	209, 1023
Aor13HI	TCCGGA	3 cut(s)	1093, 1226, 1817
AoxI	GGCC	7 cut(s)	216, 462, 868, 961, 1085, 1105, 1441
ApeKI	GCWGC	2 cut(s)	616, 1253
ApoI	RAATTY	9 cut(s)	420, 585, 1265, 1330, 1433, 1529, 1881, 1893, 1929
Asp700I	GAANNNNTTC	4 cut(s)	433, 1076, 1361, 1952
AspLEI	GCGC	1 cut(s)	2059
AspS9I	GGNCC	5 cut(s)	463, 772, 1085, 1105, 2016
AsuC2I	CCSGG	4 cut(s)	426, 1012, 1282, 1369
AsuHPI	GGTGA	9 cut(s)	28, 163, 784, 902, 1270, 1453, 1645, 1663, 1910
AsuNHI	GCTAGC	1 cut(s)	500
AvaI	CYCGRG	2 cut(s)	209, 1023
AvaII	GGWCC	2 cut(s)	772, 2016
BalI	TGGCCA	1 cut(s)	218
BanII	GRGCYC	4 cut(s)	29, 1461, 1704, 1800
BauI	CACGAG	1 cut(s)	80
BbsI	GAAGAC	1 cut(s)	194
Bbv12I	GWGCWC	3 cut(s)	1427, 1704, 1800
BbvI	GCAGC	2 cut(s)	603, 1240
BccI	CCATC	7 cut(s)	208, 1315, 1322, 1487, 1529, 1555, 1906
BceAI	ACGGC	2 cut(s)	883, 1659
BcgI	CGANNNNNNTGC	2 cut(s)	1819, 1853
BciT130I	CCWGG	4 cut(s)	279, 1170, 1849, 2054
BciVI	GTATCC	1 cut(s)	1003
BclI	TGATCA	1 cut(s)	1200
BcnI	CCSGG	4 cut(s)	426, 1012, 1282, 1369
BcoDI	GTCTC	2 cut(s)	374, 1697
BcuI	ACTAGT	1 cut(s)	847
BfaI	CTAG	4 cut(s)	501, 848, 1842, 1997
BfuI	GTATCC	1 cut(s)	1003
BisI	GCNGC	3 cut(s)	617, 1254, 1994
BlsI	GCNGC	3 cut(s)	618, 1255, 1995
Bme1390I	CCNGG	8 cut(s)	279, 426, 1012, 1170, 1282, 1369, 1849, 2054
Bme18I	GGWCC	2 cut(s)	772, 2016
BmeRI	GACNNNNNGTC	1 cut(s)	198
BmeT110I	CYCGRG	2 cut(s)	209, 1023
BmgT120I	GGNCC	5 cut(s)	463, 772, 1085, 1105, 2016
BmiI	GGNNCC	3 cut(s)	26, 1321, 2017
BmrFI	CCNGG	8 cut(s)	279, 426, 1012, 1170, 1282, 1369, 1849, 2054
BmrI	ACTGGG	1 cut(s)	30
BmsI	GCATC	3 cut(s)	1230, 1821, 1827
BmtI	GCTAGC	1 cut(s)	504
BmuI	ACTGGG	1 cut(s)	30
BoxI	GACNNNNGTC	1 cut(s)	979
BpiI	GAAGAC	1 cut(s)	194
BplI	GAGNNNNNCTC	2 cut(s)	800, 832
BpmI	CTGGAG	6 cut(s)	34, 77, 300, 435, 720, 926
BpuEI	CTTGAG	8 cut(s)	329, 377, 509, 809, 971, 1310, 1364, 1688
BpuMI	CCSGG	4 cut(s)	426, 1012, 1282, 1369
BsaHI	GRCGYC	1 cut(s)	321
BsaJI	CCNNGG	2 cut(s)	1022, 2052
BsaWI	WCCGGW	7 cut(s)	949, 995, 1093, 1226, 1463, 1673, 1817
BsaXI	ACNNNNNCTCC	6 cut(s)	31, 61, 1150, 1180, 1349, 1379
Bsc4I	CCNNNNNNNGG	4 cut(s)	214, 301, 599, 1553
Bse118I	RCCGGY	1 cut(s)	1107
Bse1I	ACTGG	4 cut(s)	25, 108, 366, 418
Bse3DI	GCAATG	1 cut(s)	174
BseAI	TCCGGA	3 cut(s)	1093, 1226, 1817
BseBI	CCWGG	4 cut(s)	279, 1170, 1849, 2054
BseDI	CCNNGG	2 cut(s)	1022, 2052
BseGI	GGATG	1 cut(s)	1307
BseLI	CCNNNNNNNGG	4 cut(s)	214, 301, 599, 1553
BseMI	GCAATG	1 cut(s)	174
BseMII	CTCAG	3 cut(s)	394, 585, 1539
BseNI	ACTGG	4 cut(s)	25, 108, 366, 418
BseXI	GCAGC	2 cut(s)	603, 1240
BseYI	CCCAGC	1 cut(s)	509
BshFI	GGCC	7 cut(s)	218, 464, 870, 963, 1087, 1107, 1443
BsiHKAI	GWGCWC	3 cut(s)	1427, 1704, 1800
BsiHKCI	CYCGRG	2 cut(s)	209, 1023
BslFI	GGGAC	5 cut(s)	358, 967, 1171, 1762, 2029
BslI	CCNNNNNNNGG	4 cut(s)	214, 301, 599, 1553
BsmAI	GTCTC	2 cut(s)	374, 1697
BsmFI	GGGAC	5 cut(s)	358, 967, 1171, 1762, 2029
BsnI	GGCC	7 cut(s)	218, 464, 870, 963, 1087, 1107, 1443
BsoBI	CYCGRG	2 cut(s)	209, 1023
Bsp1286I	GDGCHC	5 cut(s)	29, 1427, 1461, 1704, 1800
Bsp13I	TCCGGA	3 cut(s)	1093, 1226, 1817
Bsp143I	GATC	4 cut(s)	892, 1200, 1651, 1936
BspACI	CCGC	3 cut(s)	353, 795, 1993
BspANI	GGCC	7 cut(s)	218, 464, 870, 963, 1087, 1107, 1443
BspCNI	CTCAG	3 cut(s)	393, 586, 1540
BspEI	TCCGGA	3 cut(s)	1093, 1226, 1817
BspLI	GGNNCC	3 cut(s)	26, 1321, 2017
BspOI	GCTAGC	1 cut(s)	504
BspPI	GGATC	1 cut(s)	1659
BsrDI	GCAATG	1 cut(s)	174
BsrFI	RCCGGY	1 cut(s)	1107
BsrI	ACTGG	4 cut(s)	25, 108, 366, 418
BssAI	RCCGGY	1 cut(s)	1107
BssECI	CCNNGG	2 cut(s)	1022, 2052
BssMI	GATC	4 cut(s)	892, 1200, 1651, 1936
BssNI	GRCGYC	1 cut(s)	321
BssSI	CACGAG	1 cut(s)	80
Bst2BI	CACGAG	1 cut(s)	80
Bst2UI	CCWGG	4 cut(s)	279, 1170, 1849, 2054
Bst4CI	ACNGT	5 cut(s)	534, 566, 581, 716, 1922
Bst6I	CTCTTC	2 cut(s)	36, 354
BstACI	GRCGYC	1 cut(s)	321
BstC8I	GCNNGC	2 cut(s)	502, 1350
BstDEI	CTNAG	3 cut(s)	380, 594, 1548
BstEII	GGTNACC	1 cut(s)	998
BstF5I	GGATG	1 cut(s)	1307
BstHHI	GCGC	1 cut(s)	2059
BstKTI	GATC	4 cut(s)	895, 1203, 1654, 1939
BstMAI	GTCTC	2 cut(s)	374, 1697
BstMBI	GATC	4 cut(s)	892, 1200, 1651, 1936
BstMWI	GCNNNNNNNGC	2 cut(s)	506, 622
BstNI	CCWGG	4 cut(s)	279, 1170, 1849, 2054
BstNSI	RCATGY	2 cut(s)	92, 1729
BstPAI	GACNNNNGTC	1 cut(s)	979
BstPI	GGTNACC	1 cut(s)	998
BstSCI	CCNGG	8 cut(s)	277, 424, 1010, 1168, 1280, 1367, 1847, 2052
BstV1I	GCAGC	2 cut(s)	603, 1240
BstV2I	GAAGAC	1 cut(s)	194
BstX2I	RGATCY	1 cut(s)	1651
BstXI	CCANNNNNNTGG	3 cut(s)	851, 1082, 1601
BstYI	RGATCY	1 cut(s)	1651
BsuI	GTATCC	1 cut(s)	1003
BsuRI	GGCC	7 cut(s)	218, 464, 870, 963, 1087, 1107, 1443
BtsCI	GGATG	1 cut(s)	1307
BtsIMutI	CAGTG	3 cut(s)	411, 1148, 1606
Cac8I	GCNNGC	2 cut(s)	502, 1350
CfoI	GCGC	1 cut(s)	2059
Cfr10I	RCCGGY	1 cut(s)	1107
Cfr13I	GGNCC	5 cut(s)	463, 772, 1085, 1105, 2016
CseI	GACGC	1 cut(s)	329
Csp6I	GTAC	2 cut(s)	535, 1967
CspCI	CAANNNNNGTGG	2 cut(s)	579, 614
CviAII	CATG	6 cut(s)	65, 89, 631, 1420, 1585, 1726
CviQI	GTAC	2 cut(s)	535, 1967
DdeI	CTNAG	3 cut(s)	380, 594, 1548
DpnI	GATC	4 cut(s)	894, 1202, 1653, 1938
DpnII	GATC	4 cut(s)	892, 1200, 1651, 1936
DriI	GACNNNNNGTC	1 cut(s)	198
EaeI	YGGCCR	3 cut(s)	216, 868, 961
Eam1104I	CTCTTC	2 cut(s)	36, 354
Eam1105I	GACNNNNNGTC	1 cut(s)	198
EarI	CTCTTC	2 cut(s)	36, 354
Ecl136II	GAGCTC	2 cut(s)	1702, 1798
Eco147I	AGGCCT	1 cut(s)	1443
Eco24I	GRGCYC	4 cut(s)	29, 1461, 1704, 1800
Eco32I	GATATC	2 cut(s)	386, 1129
Eco47I	GGWCC	2 cut(s)	772, 2016
Eco53kI	GAGCTC	2 cut(s)	1702, 1798
Eco57I	CTGAAG	3 cut(s)	1085, 1162, 1753
Eco88I	CYCGRG	2 cut(s)	209, 1023
Eco91I	GGTNACC	1 cut(s)	998
EcoICRI	GAGCTC	2 cut(s)	1702, 1798
EcoO65I	GGTNACC	1 cut(s)	998
EcoRI	GAATTC	3 cut(s)	585, 1265, 1893
EcoRII	CCWGG	4 cut(s)	277, 1168, 1847, 2052
EcoRV	GATATC	2 cut(s)	386, 1129
EcoT22I	ATGCAT	1 cut(s)	2044
EcoT38I	GRGCYC	4 cut(s)	29, 1461, 1704, 1800
FaeI	CATG	6 cut(s)	68, 92, 634, 1423, 1588, 1729
FaqI	GGGAC	5 cut(s)	358, 967, 1171, 1762, 2029
FatI	CATG	6 cut(s)	64, 88, 630, 1419, 1584, 1725
FauNDI	CATATG	1 cut(s)	1515
FbaI	TGATCA	1 cut(s)	1200
Fnu4HI	GCNGC	3 cut(s)	617, 1254, 1994
FokI	GGATG	1 cut(s)	1294
FriOI	GRGCYC	4 cut(s)	29, 1461, 1704, 1800
Fsp4HI	GCNGC	3 cut(s)	617, 1254, 1994
FspBI	CTAG	4 cut(s)	501, 848, 1842, 1997
GlaI	GCGC	1 cut(s)	2058
GluI	GCNGC	3 cut(s)	617, 1254, 1994
GsaI	CCCAGC	1 cut(s)	513
GsuI	CTGGAG	6 cut(s)	34, 77, 300, 435, 720, 926
HaeIII	GGCC	7 cut(s)	218, 464, 870, 963, 1087, 1107, 1443
HgaI	GACGC	1 cut(s)	329
HhaI	GCGC	1 cut(s)	2059
Hin1I	GRCGYC	1 cut(s)	321
Hin1II	CATG	6 cut(s)	68, 92, 634, 1423, 1588, 1729
Hin6I	GCGC	1 cut(s)	2057
HinP1I	GCGC	1 cut(s)	2057
HincII	GTYRAC	1 cut(s)	784
HindII	GTYRAC	1 cut(s)	784
HindIII	AAGCTT	2 cut(s)	236, 1340
HpaI	GTTAAC	1 cut(s)	784
HphI	GGTGA	9 cut(s)	28, 163, 784, 902, 1270, 1453, 1645, 1663, 1910
Hpy166II	GTNNAC	7 cut(s)	757, 784, 1195, 1397, 1541, 1786, 1925
Hpy8I	GTNNAC	7 cut(s)	757, 784, 1195, 1397, 1541, 1786, 1925
Hpy99I	CGWCG	4 cut(s)	323, 542, 581, 667
HpyAV	CCTTC	4 cut(s)	60, 1060, 1485, 1727
HpyCH4III	ACNGT	5 cut(s)	534, 566, 581, 716, 1922
HpyCH4IV	ACGT	6 cut(s)	102, 537, 695, 918, 980, 1197
HpyF10VI	GCNNNNNNNGC	2 cut(s)	506, 622
HpyF3I	CTNAG	3 cut(s)	380, 594, 1548
HpySE526I	ACGT	6 cut(s)	102, 537, 695, 918, 980, 1197
Hsp92I	GRCGYC	1 cut(s)	321
Hsp92II	CATG	6 cut(s)	68, 92, 634, 1423, 1588, 1729
HspAI	GCGC	1 cut(s)	2057
Kpn2I	TCCGGA	3 cut(s)	1093, 1226, 1817
Ksp22I	TGATCA	1 cut(s)	1200
KspAI	GTTAAC	1 cut(s)	784
Kzo9I	GATC	4 cut(s)	892, 1200, 1651, 1936
LmnI	GCTCC	4 cut(s)	24, 52, 304, 1699
Lsp1109I	GCAGC	2 cut(s)	603, 1240
LweI	GCATC	3 cut(s)	1230, 1821, 1827
MaeI	CTAG	4 cut(s)	501, 848, 1842, 1997
MaeII	ACGT	6 cut(s)	102, 537, 695, 918, 980, 1197
MaeIII	GTNAC	3 cut(s)	67, 566, 998
MalI	GATC	4 cut(s)	894, 1202, 1653, 1938
MboI	GATC	4 cut(s)	892, 1200, 1651, 1936
MflI	RGATCY	1 cut(s)	1651
MhlI	GDGCHC	5 cut(s)	29, 1427, 1461, 1704, 1800
MlsI	TGGCCA	1 cut(s)	218
MluNI	TGGCCA	1 cut(s)	218
MlyI	GAGTC	7 cut(s)	208, 340, 620, 661, 964, 1574, 1645
MmeI	TCCRAC	3 cut(s)	276, 686, 868
Mox20I	TGGCCA	1 cut(s)	218
Mph1103I	ATGCAT	1 cut(s)	2044
MroI	TCCGGA	3 cut(s)	1093, 1226, 1817
MroXI	GAANNNNTTC	4 cut(s)	433, 1076, 1361, 1952
MscI	TGGCCA	1 cut(s)	218
MseI	TTAA	7 cut(s)	99, 233, 783, 834, 1049, 1590, 1662
MslI	CAYNNNNRTG	1 cut(s)	1599
Msp20I	TGGCCA	1 cut(s)	218
MspA1I	CMGCKG	2 cut(s)	797, 1993
MspR9I	CCNGG	8 cut(s)	279, 426, 1012, 1170, 1282, 1369, 1849, 2054
MvaI	CCWGG	4 cut(s)	279, 1170, 1849, 2054
MwoI	GCNNNNNNNGC	2 cut(s)	506, 622
NciI	CCSGG	4 cut(s)	426, 1012, 1282, 1369
NdeI	CATATG	1 cut(s)	1515
NdeII	GATC	4 cut(s)	892, 1200, 1651, 1936
NheI	GCTAGC	1 cut(s)	500
NlaIII	CATG	6 cut(s)	68, 92, 634, 1423, 1588, 1729
NlaIV	GGNNCC	3 cut(s)	26, 1321, 2017
NmuCI	GTSAC	1 cut(s)	67
NsiI	ATGCAT	1 cut(s)	2044
NspI	RCATGY	2 cut(s)	92, 1729
PaeR7I	CTCGAG	1 cut(s)	209
PceI	AGGCCT	1 cut(s)	1443
PciI	ACATGT	1 cut(s)	1725
PcsI	WCGNNNNNNNCGW	1 cut(s)	662
PdmI	GAANNNNTTC	4 cut(s)	433, 1076, 1361, 1952
PflFI	GACNNNGTC	1 cut(s)	632
PfoI	TCCNGGA	3 cut(s)	277, 424, 1168
PkrI	GCNGC	3 cut(s)	618, 1255, 1995
PleI	GAGTC	7 cut(s)	207, 340, 619, 661, 963, 1573, 1644
PpsI	GAGTC	7 cut(s)	207, 340, 619, 661, 963, 1573, 1644
PscI	ACATGT	1 cut(s)	1725
PshAI	GACNNNNGTC	1 cut(s)	979
Psp124BI	GAGCTC	2 cut(s)	1704, 1800
Psp6I	CCWGG	4 cut(s)	277, 1168, 1847, 2052
PspEI	GGTNACC	1 cut(s)	998
PspFI	CCCAGC	1 cut(s)	509
PspGI	CCWGG	4 cut(s)	277, 1168, 1847, 2052
PspN4I	GGNNCC	3 cut(s)	26, 1321, 2017
PspPI	GGNCC	5 cut(s)	463, 772, 1085, 1105, 2016
PsrI	GAACNNNNNNTAC	2 cut(s)	848, 880
PsuI	RGATCY	1 cut(s)	1651
PsyI	GACNNNGTC	1 cut(s)	632
RsaI	GTAC	2 cut(s)	536, 1968
RsaNI	GTAC	2 cut(s)	535, 1967
RseI	CAYNNNNRTG	1 cut(s)	1599
SacI	GAGCTC	2 cut(s)	1704, 1800
SaqAI	TTAA	7 cut(s)	99, 233, 783, 834, 1049, 1590, 1662
SatI	GCNGC	3 cut(s)	617, 1254, 1994
Sau3AI	GATC	4 cut(s)	892, 1200, 1651, 1936
Sau96I	GGNCC	5 cut(s)	463, 772, 1085, 1105, 2016
SchI	GAGTC	7 cut(s)	208, 340, 620, 661, 964, 1574, 1645
ScrFI	CCNGG	8 cut(s)	279, 426, 1012, 1170, 1282, 1369, 1849, 2054
SduI	GDGCHC	5 cut(s)	29, 1427, 1461, 1704, 1800
SfaNI	GCATC	3 cut(s)	1230, 1821, 1827
Sfr274I	CTCGAG	1 cut(s)	209
SinI	GGWCC	2 cut(s)	772, 2016
SlaI	CTCGAG	1 cut(s)	209
SmiMI	CAYNNNNRTG	1 cut(s)	1599
SmlI	CTYRAG	9 cut(s)	209, 308, 356, 524, 824, 986, 1325, 1343, 1703
SmoI	CTYRAG	9 cut(s)	209, 308, 356, 524, 824, 986, 1325, 1343, 1703
SpeI	ACTAGT	1 cut(s)	847
SseBI	AGGCCT	1 cut(s)	1443
SsiI	CCGC	3 cut(s)	353, 795, 1993
SspI	AATATT	3 cut(s)	442, 458, 1389
SspMI	CTAG	4 cut(s)	501, 848, 1842, 1997
SstI	GAGCTC	2 cut(s)	1704, 1800
StuI	AGGCCT	1 cut(s)	1443
StyD4I	CCNGG	8 cut(s)	277, 424, 1010, 1168, 1280, 1367, 1847, 2052
TaaI	ACNGT	5 cut(s)	534, 566, 581, 716, 1922
TaiI	ACGT	6 cut(s)	105, 540, 698, 921, 983, 1200
TaqI	TCGA	6 cut(s)	128, 210, 318, 576, 707, 1533
TauI	GCSGC	1 cut(s)	1996
Tru1I	TTAA	7 cut(s)	99, 233, 783, 834, 1049, 1590, 1662
Tru9I	TTAA	7 cut(s)	99, 233, 783, 834, 1049, 1590, 1662
TscAI	CASTG	3 cut(s)	418, 1155, 1606
TseFI	GTSAC	1 cut(s)	67
TseI	GCWGC	2 cut(s)	616, 1253
Tsp45I	GTSAC	1 cut(s)	67
TspDTI	ATGAA	8 cut(s)	53, 219, 434, 874, 984, 1154, 1370, 1961
TspGWI	ACGGA	1 cut(s)	317
TspRI	CASTG	3 cut(s)	418, 1155, 1606
Tth111I	GACNNNGTC	1 cut(s)	632
VpaK11BI	GGWCC	2 cut(s)	772, 2016
XapI	RAATTY	9 cut(s)	420, 585, 1265, 1330, 1433, 1529, 1881, 1893, 1929
XceI	RCATGY	2 cut(s)	92, 1729
XhoI	CTCGAG	1 cut(s)	209
XmnI	GAANNNNTTC	4 cut(s)	433, 1076, 1361, 1952
XspI	CTAG	4 cut(s)	501, 848, 1842, 1997
Zsp2I	ATGCAT	1 cut(s)	2044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.