Rmu_co8302039.1_g000001

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8302039.1
Physical Location & Seq
Reverse (-)
394 .. 852
459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8302039.1_g000001.1.cds

Sequence Viewer

Length: 459 bp
ctgaaggtcgatgagaagagcgacgtctatagttttggtgtagttctcttagaacttgttagtggcaagaaaccagttggtgaatttggagatggagtcgatatagtccaatgggttcggaaaatgacggattcaaacaaggaaggagtcctgaagatccttgattccagactcccgtctgttcccctacatgaggttatgcacgtattttacgtcgcaatgctctgcgttgaagaacaagcagtggaacgtcccacgatgagagaagtggttcaaattcttacagagcttccaattccaccaggctcaaagcaaggaggagacacaacaacaatcacagactcccctcaacaatctgccattattactgcaatggaatcaccaactaccacaaaagacacgaaagaccatcaacagccaccgccacaatcgccaccgccggatcttctaagcatttga

Protein Analysis

152

Amino Acids

16.68

Weight (kDa)

4.79

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000461)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75820
fragaria_vesca FvH4_2g38230 FvH4_2g38230
malus_domestica MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 27
AciI CCGC 2 cut(s) 422, 437
AclWI GGATC 2 cut(s) 151, 450
AcsI RAATTY 2 cut(s) 83, 276
AcuI CTGAAG 2 cut(s) 23, 173
AcyI GRCGYC 1 cut(s) 24
AfiI CCNNNNNNNGG 1 cut(s) 193
AgsI TTSAA 3 cut(s) 135, 233, 275
AjnI CCWGG 1 cut(s) 301
AluBI AGCT 1 cut(s) 289
AluI AGCT 1 cut(s) 289
Alw26I GTCTC 1 cut(s) 315
AlwI GGATC 2 cut(s) 151, 450
ApoI RAATTY 2 cut(s) 83, 276
Asp700I GAANNNNTTC 1 cut(s) 270
AsuHPI GGTGA 2 cut(s) 92, 372
BccI CCATC 2 cut(s) 86, 417
BciT130I CCWGG 1 cut(s) 303
BcoDI GTCTC 1 cut(s) 315
BfmI CTRYAG 1 cut(s) 28
Bme1390I CCNGG 1 cut(s) 303
BmrFI CCNGG 1 cut(s) 303
BoxI GACNNNNGTC 1 cut(s) 175
BsaAI YACGTR 1 cut(s) 205
BsaHI GRCGYC 1 cut(s) 24
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 1 cut(s) 193
Bse1I ACTGG 1 cut(s) 74
Bse3DI GCAATG 2 cut(s) 225, 378
BseBI CCWGG 1 cut(s) 303
BseLI CCNNNNNNNGG 1 cut(s) 193
BseMI GCAATG 2 cut(s) 225, 378
BseNI ACTGG 1 cut(s) 74
BseRI GAGGAG 1 cut(s) 333
BsiSI CCGG 1 cut(s) 440
BslFI GGGAC 1 cut(s) 237
BslI CCNNNNNNNGG 1 cut(s) 193
BsmAI GTCTC 1 cut(s) 315
BsmFI GGGAC 1 cut(s) 237
Bsp143I GATC 2 cut(s) 156, 442
BspACI CCGC 2 cut(s) 422, 437
BspPI GGATC 2 cut(s) 151, 450
BspQI GCTCTTC 1 cut(s) 11
BsrDI GCAATG 2 cut(s) 225, 378
BsrI ACTGG 1 cut(s) 74
BssMI GATC 2 cut(s) 156, 442
BssNI GRCGYC 1 cut(s) 24
Bst2UI CCWGG 1 cut(s) 303
Bst6I CTCTTC 1 cut(s) 11
BstACI GRCGYC 1 cut(s) 24
BstBAI YACGTR 1 cut(s) 205
BstDEI CTNAG 2 cut(s) 49, 449
BstENI CCTNNNNNAGG 1 cut(s) 191
BstKTI GATC 2 cut(s) 159, 445
BstMAI GTCTC 1 cut(s) 315
BstMBI GATC 2 cut(s) 156, 442
BstMWI GCNNNNNNNGC 1 cut(s) 430
BstNI CCWGG 1 cut(s) 303
BstPAI GACNNNNGTC 1 cut(s) 175
BstSCI CCNGG 1 cut(s) 301
BstSFI CTRYAG 1 cut(s) 28
BstX2I RGATCY 2 cut(s) 156, 442
BstYI RGATCY 2 cut(s) 156, 442
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 1 cut(s) 249
CviAII CATG 1 cut(s) 191
CviJI RGCY 3 cut(s) 289, 306, 418
CviKI_1 RGCY 3 cut(s) 289, 306, 418
DdeI CTNAG 2 cut(s) 49, 449
DpnI GATC 2 cut(s) 158, 444
DpnII GATC 2 cut(s) 156, 442
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
Eco57I CTGAAG 2 cut(s) 23, 173
EcoNI CCTNNNNNAGG 1 cut(s) 191
EcoRII CCWGG 1 cut(s) 301
FaeI CATG 1 cut(s) 194
FaiI YATR 4 cut(s) 30, 104, 192, 200
FaqI GGGAC 1 cut(s) 237
FatI CATG 1 cut(s) 190
HapII CCGG 1 cut(s) 440
Hin1I GRCGYC 1 cut(s) 24
Hin1II CATG 1 cut(s) 194
HinfI GANTC 7 cut(s) 96, 131, 147, 164, 171, 341, 377
HpaII CCGG 1 cut(s) 440
HphI GGTGA 2 cut(s) 92, 372
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 2 cut(s) 151, 168
Hpy99I CGWCG 2 cut(s) 26, 218
HpyAV CCTTC 1 cut(s) 137
HpyCH4IV ACGT 4 cut(s) 24, 204, 213, 250
HpyCH4V TGCA 2 cut(s) 202, 371
HpyF10VI GCNNNNNNNGC 1 cut(s) 430
HpyF3I CTNAG 2 cut(s) 49, 449
HpySE526I ACGT 4 cut(s) 24, 204, 213, 250
Hsp92I GRCGYC 1 cut(s) 24
Hsp92II CATG 1 cut(s) 194
Kzo9I GATC 2 cut(s) 156, 442
LguI GCTCTTC 1 cut(s) 11
LpnPI CCDG 6 cut(s) 87, 164, 181, 288, 315, 453
MaeII ACGT 4 cut(s) 24, 204, 213, 250
MalI GATC 2 cut(s) 158, 444
MboI GATC 2 cut(s) 156, 442
MboII GAAGA 4 cut(s) 28, 166, 245, 437
MflI RGATCY 2 cut(s) 156, 442
MluCI AATT 3 cut(s) 83, 276, 294
MlyI GAGTC 4 cut(s) 105, 156, 165, 335
MnlI CCTC 3 cut(s) 187, 311, 357
MroXI GAANNNNTTC 1 cut(s) 270
MspI CCGG 1 cut(s) 440
MspR9I CCNGG 1 cut(s) 303
MvaI CCWGG 1 cut(s) 303
MwoI GCNNNNNNNGC 1 cut(s) 430
NdeII GATC 2 cut(s) 156, 442
NlaIII CATG 1 cut(s) 194
PciSI GCTCTTC 1 cut(s) 11
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PdmI GAANNNNTTC 1 cut(s) 270
PfeI GAWTC 3 cut(s) 131, 164, 377
PleI GAGTC 4 cut(s) 104, 155, 165, 335
PpsI GAGTC 4 cut(s) 104, 155, 165, 335
Ppu21I YACGTR 1 cut(s) 205
PshAI GACNNNNGTC 1 cut(s) 175
Psp6I CCWGG 1 cut(s) 301
PspGI CCWGG 1 cut(s) 301
PsuI RGATCY 2 cut(s) 156, 442
SapI GCTCTTC 1 cut(s) 11
Sau3AI GATC 2 cut(s) 156, 442
SchI GAGTC 4 cut(s) 105, 156, 165, 335
ScrFI CCNGG 1 cut(s) 303
SetI ASST 7 cut(s) 9, 27, 198, 207, 216, 253, 291
SfcI CTRYAG 1 cut(s) 28
Sse9I AATT 3 cut(s) 83, 276, 294
SsiI CCGC 2 cut(s) 422, 437
StyD4I CCNGG 1 cut(s) 301
TaiI ACGT 4 cut(s) 27, 207, 216, 253
TaqI TCGA 2 cut(s) 9, 99
TasI AATT 3 cut(s) 83, 276, 294
TfiI GAWTC 3 cut(s) 131, 164, 377
TscAI CASTG 1 cut(s) 249
TspGWI ACGGA 1 cut(s) 143
TspRI CASTG 1 cut(s) 249
XagI CCTNNNNNAGG 1 cut(s) 191
XapI RAATTY 2 cut(s) 83, 276
XmnI GAANNNNTTC 1 cut(s) 270
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.