Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001653.1

Orthogroup ID

OG0000461

Physical Location & Seq

Genomic Coordinates Reverse (-)

78825 .. 81790

Gene Structure 2966 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001653.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

atgattggcctcaaaggttcagggctagatgactgggagccctcttctcactcctactgcttcttctctggagtttcatgtgaccgtcaatcacgagttgttgctcttaacgtgtccagtttgcctctgttcggctcgattccagcagagattgggcttctgaacaagctcatcaacctcaccattgctgacaacaacttgacagagagtcttcccctcgagatcgccaacctgacttctttaaagctcttgaacatctccaacaacttgttcagtggaagatttcccggagaagtcacgctcagaatgacagagcttgaggttgttgacgcctataataacaacctcaatggcccacttcctgttgagctcgtcaaactcaaaaggctcaaatatctacatcttggcgggaactacttcgccggagaaattcccaaaaattattcaaagattcaaagcttagaatatttgggcctcaacggtaactcgcttggtggaaagtttccggccagcttggctaggttgaagaatctcaaggaattgtacgtcgggtactataacaattttgacggtggaattccacctgagttgggaatgttgaaggccttgcaagttcttgacatggcctggtgtaacctctccgacaagattccgacgactctgggctttttgaagaatttacgggggttgtttttacagggtaaccatttcagtggtaatatacctccagagctttcaggaatgacaagcctcatgagtttggatctctcgattaacgagttcaccggagaaataccagaaagtttctcagagctgaagaaccttagccttctcaacctgcataagaacaatctttacggccccatacccaacttcatcggcgatcttcctcatctggaggtgcttcgagtttgggagaaccactttacatttgaactacctgagagacttggccgaaatggaaggctcagagacctcgatgtaactggaaaccacctaaccggcctgattcctcgggatttatgcataggagggaggttaaagacgttggttctgatggagaattacttctttgggccgattccggaggaattgggcctgtgcaagtcgctagtcaaaatcagattgatgaaaaacacactcaacgggactattcctgctggaatcttcagcttacctgatgtaatcatcattgagctcatcgataactacttgtctggagagcttccgttgcagatgtctgcggcctcactcagaatcctagctctttctaggaatcaaatttttggaagaatcccatccagcattggaattctccggaatttacaaattcttttgctagatatgaacagattctccggggaagtaccagaggaaatctttagtttacaatttctaagggaactcaacatcagcaccaacaattttggtggtgaaattccgggttctatctctggttgttcctcgctaacgtccctagattttagtcaaaacactttagatggggaaatcccaagagggataggcaaactgaatgcaattgagtttcttaatttctcaaggaacaagctaacaggtccaattcctgtggaattcaaatacatggcgagcctcacaactttggatctctcctataacaatttcattggtaggatcccgactgggggtcattttttatgggtcatctcttcttttgaaggaaataccaatctgtgttcgccgagaaaggtgttatgcagctctgataaccacccacgacaccaaaaccacaaagtgatcatcgtaggattagctgcagttatgctaactttgctactcatactgctacttatgtatgtacttatcagggtttataggaagagaaagactaggaaatttgagaaatgtggctcttggaagctcacaatttttcaagcacagctcgatctcaacgcagaggcccttctccagtgtctaaacgctcagaacatcatcggcaggggcggagctgggattgtctatcgcgggaaaatgctacacggtgatgatattgcaatcaaacggttgcagagggatcagggattttcggctgaaattaaaacattgggacaaatcaagcaccggaatatagtgagactgttagggtacatgtcgaacaaggacactaatttgttgttgtacgagtacatgactaatggtagcttgggacaactgttgcatgggtctaatggagggcatttggagtgggaaatgagatacaagattgccgtggaagcagcaaagggattgtgttatctccaccatgattgctcgcctctgattatacacagggatgtcaagtcctataacatcttgctggactctaattttgaagctcatatagctgatttcgggcttgccaaatactttcaaggaccgacagattgcatgtcttcttttgctggtacctttggttacattgccccagagtacggtcacacaatgaaagtggatgagaaaatcgatgtgtacagctttggtgtggttttgctggaactagtaacagggaggaaaccagtagttgaactggtcgaagaagctgtgaatatagtcagttgggtaaggaaaaccacatcacaaattcctcagtcatccgctgcatcatctgtacagtcaattgtggactccaggctcagaggattcccattggctggtgtcgagcacgtgttcaaaatagcaatgatgtgtgttgagaatcacagctctgcacgacctacaatgagggaagtcgtctacttgctcgctaatcctcctccttctgctccaggcatgaccaaccattag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000325 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009506 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009934 GO:0009987 GO:0010073 GO:0010075 GO:0010080 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022414 GO:0022603 GO:0030054 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0036289 GO:0040008 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048832 GO:0048833 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0055044 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0090567 GO:0140096 GO:1901564 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

933

Amino Acids

103.56

Weight (kDa)

8.06

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000461)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75820
fragaria_vesca	FvH4_2g38230 FvH4_2g38230
malus_domestica	MD05G1138900.v1.1 MD05G1139100.v1.1 MD05G1139200.v1.1 MD08G1010700.v1.1 MD08G1241800.v1.1 MD15G1010800.v1.1
prunus_persica	Prupe.1G363300_v2.0.a1 Prupe.6G163000_v2.0.a1
pyrus_communis	pycom05g13420 pycom05g13430 pycom08g00930 pycom15g00920
rosa_chinensis	RchiOBHm_Chr2g0118991 RchiOBHm_Chr2g0119001 RchiOBHm_Chr2g0119031 RchiOBHm_Chr2g0119041 RchiOBHm_Chr2g0119051 RchiOBHm_Chr2g0119091 RchiOBHm_Chr2g0119101 RchiOBHm_Chr2g0119111 RchiOBHm_Chr2g0120661 RchiOBHm_Chr2g0173321 RchiOBHm_Chr3g0478281 RchiOBHm_Chr4g0421131 RchiOBHm_Chr6g0303151
rosa_laevigata	RLG00000011084 RLG00000011103 RLG00000018441 RLG00000018445 RLG00000018565 RLG00000018566 RLG00000018567 RLG00000018568 RLG00000018571
rosa_multiflora	Rmu_co8157004.1_g000001 Rmu_co8277963.1_g000001 Rmu_co8302039.1_g000001 Rmu_co8360703.1_g000001 Rmu_co8384839.1_g000001 Rmu_sc0000319.1_g000027 Rmu_sc0001653.1_g000012 Rmu_sc0001653.1_g000013 Rmu_sc0001653.1_g000021 Rmu_sc0001822.1_g000002 Rmu_sc0001822.1_g000008 Rmu_sc0001822.1_g000030 Rmu_sc0001844.1_g000003 Rmu_sc0008911.1_g000007 Rmu_sc0019499.1_g000001 Rmu_sc0025689.1_g000001
rosa_roxburghii	Rroxscaffold_2G00123240 Rroxscaffold_2G00123260 Rroxscaffold_2G00124530 Rroxscaffold_7G00164970 Rroxscaffold_7G00192210
rosa_rugosa	Rorug02G0220100 Rorug02G0220200 Rorug02G0230200 Rorug02G0230300 Rorug06G0319400
rosa_samantha	Rh2AG277100 Rh2AG277200 Rh2AG277700 Rh2AG277800 Rh2AG278100 Rh2AG278300 Rh2AG286600 Rh2BG289000 Rh2BG289200 Rh2BG298100 Rh2BG298200 Rh2CG275700 Rh2CG275900 Rh2CG623600 Rh2DG284200 Rh2DG303300 Rh2DG303400 Rh2DG303500 Rh2DG312000 Rh2DG312100 Rh6AG433400 Rh6BG469300 Rh6CG445900 Rh6DG432500
rosa_wichuraiana	Rw2G022080 Rw2G022990 Rw2G023000 Rw6G037580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	846
Acc65I	GGTACC	1 cut(s)	2423
AccB1I	GGYRCC	1 cut(s)	2423
AccB7I	CCANNNNNTGG	1 cut(s)	2669
AccI	GTMKAC	1 cut(s)	2751
AccII	CGCG	1 cut(s)	2004
AccIII	TCCGGA	2 cut(s)	1084, 1317
AciI	CCGC	5 cut(s)	408, 1244, 1983, 2004, 2613
AclWI	GGATC	5 cut(s)	771, 1632, 1648, 1661, 2061
AcoI	YGGCCR	2 cut(s)	507, 952
AcuI	CTGAAG	2 cut(s)	836, 1153
AcvI	CACGTG	1 cut(s)	2683
AcyI	GRCGYC	1 cut(s)	330
AdeI	CACNNNGTG	1 cut(s)	1774
AfiI	CCNNNNNNNGG	6 cut(s)	131, 590, 1663, 1664, 2450, 2669
AflIII	ACRYGT	3 cut(s)	111, 2127, 2682
AhdI	GACNNNNNGTC	2 cut(s)	207, 1665
AhlI	ACTAGT	1 cut(s)	2515
AjnI	CCWGG	3 cut(s)	626, 2645, 2782
AjuI	GAANNNNNNNTTGG	2 cut(s)	254, 286
AloI	GAACNNNNNNTCC	2 cut(s)	1340, 1372
Alw21I	GWGCWC	3 cut(s)	372, 1200, 2682
Alw26I	GTCTC	3 cut(s)	940, 966, 2107
AlwI	GGATC	5 cut(s)	771, 1632, 1648, 1661, 2061
Ama87I	CYCGRG	2 cut(s)	218, 1014
Aor13HI	TCCGGA	2 cut(s)	1084, 1317
ApeKI	GCWGC	4 cut(s)	1737, 1793, 2255, 2615
ArsI	GACNNNNNNTTYG	2 cut(s)	2330, 2362
Asp700I	GAANNNNTTC	3 cut(s)	416, 1067, 1352
Asp718I	GGTACC	1 cut(s)	2423
AspS9I	GGNCC	8 cut(s)	353, 472, 860, 1076, 1096, 1577, 1939, 2393
AsuC2I	CCSGG	3 cut(s)	288, 1360, 1443
AsuHPI	GGTGA	4 cut(s)	172, 775, 1445, 2033
AvaI	CYCGRG	2 cut(s)	218, 1014
AvaII	GGWCC	2 cut(s)	1577, 2393
BamHI	GGATCC	1 cut(s)	1653
BanI	GGYRCC	1 cut(s)	2423
BanII	GRGCYC	3 cut(s)	42, 372, 1200
BauI	CACGAG	1 cut(s)	93
BbrPI	CACGTG	1 cut(s)	2683
BbsI	GAAGAC	2 cut(s)	203, 2403
Bbv12I	GWGCWC	3 cut(s)	372, 1200, 2682
BbvI	GCAGC	4 cut(s)	1749, 1780, 2267, 2602
BccI	CCATC	3 cut(s)	1051, 1306, 1496
BceAI	ACGGC	2 cut(s)	874, 2231
BciT130I	CCWGG	3 cut(s)	628, 2647, 2784
BclI	TGATCA	1 cut(s)	1776
BcnI	CCSGG	3 cut(s)	288, 1360, 1443
BcoDI	GTCTC	3 cut(s)	940, 966, 2107
BcuI	ACTAGT	1 cut(s)	2515
BfaI	CTAG	9 cut(s)	26, 519, 1112, 1262, 1272, 1340, 1478, 1869, 2516
BfmI	CTRYAG	1 cut(s)	1794
BfuAI	ACCTGC	1 cut(s)	846
BglI	GCCNNNNNGGC	1 cut(s)	515
BisI	GCNGC	5 cut(s)	1245, 1738, 1794, 2256, 2616
BlsI	GCNGC	5 cut(s)	1246, 1739, 1795, 2257, 2617
Bme1390I	CCNGG	6 cut(s)	288, 628, 1360, 1443, 2647, 2784
Bme18I	GGWCC	2 cut(s)	1577, 2393
BmeRI	GACNNNNNGTC	2 cut(s)	207, 1665
BmeT110I	CYCGRG	2 cut(s)	218, 1014
BmgT120I	GGNCC	8 cut(s)	353, 472, 860, 1076, 1096, 1577, 1939, 2393
BmiI	GGNNCC	4 cut(s)	39, 862, 1655, 2425
BmrFI	CCNGG	6 cut(s)	288, 628, 1360, 1443, 2647, 2784
BmrI	ACTGGG	2 cut(s)	43, 1671
BmsI	GCATC	1 cut(s)	2627
BmuI	ACTGGG	2 cut(s)	43, 1671
BpiI	GAAGAC	2 cut(s)	203, 2403
BpmI	CTGGAG	7 cut(s)	90, 711, 917, 1239, 1931, 2629, 2766
Bpu10I	CCTNAGC	1 cut(s)	824
BpuEI	CTTGAG	3 cut(s)	338, 518, 1543
BpuMI	CCSGG	3 cut(s)	288, 1360, 1443
Bsa29I	ATCGAT	2 cut(s)	1203, 2481
BsaAI	YACGTR	1 cut(s)	2683
BsaHI	GRCGYC	1 cut(s)	330
BsaI	GGTCTC	1 cut(s)	966
BsaJI	CCNNGG	3 cut(s)	1013, 1359, 2247
BsaWI	WCCGGW	4 cut(s)	785, 1084, 1317, 2100
BsaXI	ACNNNNNCTCC	2 cut(s)	1340, 1370
Bsc4I	CCNNNNNNNGG	6 cut(s)	131, 590, 1663, 1664, 2450, 2669
Bse118I	RCCGGY	1 cut(s)	1001
Bse1I	ACTGG	7 cut(s)	38, 117, 991, 1666, 1948, 2534, 2550
Bse3DI	GCAATG	3 cut(s)	183, 2436, 2703
BseAI	TCCGGA	2 cut(s)	1084, 1317
BseBI	CCWGG	3 cut(s)	628, 2647, 2784
BseCI	ATCGAT	2 cut(s)	1203, 2481
BseDI	CCNNGG	3 cut(s)	1013, 1359, 2247
BseGI	GGATG	4 cut(s)	1298, 2317, 2476, 2609
BseLI	CCNNNNNNNGG	6 cut(s)	131, 590, 1663, 1664, 2450, 2669
BseMI	GCAATG	3 cut(s)	183, 2436, 2703
BseMII	CTCAG	9 cut(s)	316, 576, 822, 933, 982, 1267, 1976, 2618, 2665
BseNI	ACTGG	7 cut(s)	38, 117, 991, 1666, 1948, 2534, 2550
BseRI	GAGGAG	1 cut(s)	2760
BseXI	GCAGC	4 cut(s)	1749, 1780, 2267, 2602
BseYI	CCCAGC	1 cut(s)	1988
BsgI	GTGCAG	1 cut(s)	2709
Bsh1236I	CGCG	1 cut(s)	2004
BshNI	GGYRCC	1 cut(s)	2423
BshVI	ATCGAT	2 cut(s)	1203, 2481
BsiHKAI	GWGCWC	3 cut(s)	372, 1200, 2682
BsiHKCI	CYCGRG	2 cut(s)	218, 1014
BslFI	GGGAC	4 cut(s)	1162, 1459, 2100, 2199
BslI	CCNNNNNNNGG	6 cut(s)	131, 590, 1663, 1664, 2450, 2669
BsmAI	GTCTC	3 cut(s)	940, 966, 2107
BsmFI	GGGAC	4 cut(s)	1162, 1459, 2100, 2199
BsmI	GAATGC	1 cut(s)	1540
Bso31I	GGTCTC	1 cut(s)	966
BsoBI	CYCGRG	2 cut(s)	218, 1014
Bsp1286I	GDGCHC	4 cut(s)	42, 372, 1200, 2682
Bsp13I	TCCGGA	2 cut(s)	1084, 1317
Bsp1407I	TGTACA	2 cut(s)	2487, 2626
Bsp143I	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
BspACI	CCGC	5 cut(s)	408, 1244, 1983, 2004, 2613
BspCNI	CTCAG	9 cut(s)	315, 577, 821, 934, 981, 1266, 1975, 2617, 2664
BspDI	ATCGAT	2 cut(s)	1203, 2481
BspEI	TCCGGA	2 cut(s)	1084, 1317
BspFNI	CGCG	1 cut(s)	2004
BspHI	TCATGA	1 cut(s)	753
BspLI	GGNNCC	4 cut(s)	39, 862, 1655, 2425
BspMAI	CTGCAG	1 cut(s)	1798
BspMI	ACCTGC	1 cut(s)	846
BspPI	GGATC	5 cut(s)	771, 1632, 1648, 1661, 2061
BspT107I	GGYRCC	1 cut(s)	2423
BspTNI	GGTCTC	1 cut(s)	966
BsrDI	GCAATG	3 cut(s)	183, 2436, 2703
BsrFI	RCCGGY	1 cut(s)	1001
BsrGI	TGTACA	2 cut(s)	2487, 2626
BsrI	ACTGG	7 cut(s)	38, 117, 991, 1666, 1948, 2534, 2550
BssAI	RCCGGY	1 cut(s)	1001
BssECI	CCNNGG	3 cut(s)	1013, 1359, 2247
BssMI	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
BssNI	GRCGYC	1 cut(s)	330
BssSI	CACGAG	1 cut(s)	93
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	3 cut(s)	628, 2647, 2784
Bst4CI	ACNGT	9 cut(s)	86, 482, 572, 2021, 2043, 2118, 2193, 2453, 2631
Bst6I	CTCTTC	3 cut(s)	49, 1693, 1853
BstACI	GRCGYC	1 cut(s)	330
BstAUI	TGTACA	2 cut(s)	2487, 2626
BstBAI	YACGTR	1 cut(s)	2683
BstC8I	GCNNGC	5 cut(s)	511, 1609, 2291, 2376, 2760
BstDSI	CCRYGG	1 cut(s)	2247
BstEII	GGTNACC	1 cut(s)	701
BstF5I	GGATG	4 cut(s)	1298, 2317, 2476, 2609
BstFNI	CGCG	1 cut(s)	2004
BstKTI	GATC	8 cut(s)	225, 766, 886, 1627, 1656, 1779, 1927, 2056
BstMAI	GTCTC	3 cut(s)	940, 966, 2107
BstMBI	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
BstMWI	GCNNNNNNNGC	5 cut(s)	515, 1231, 1810, 2252, 2360
BstNI	CCWGG	3 cut(s)	628, 2647, 2784
BstNSI	RCATGY	2 cut(s)	2131, 2410
BstPI	GGTNACC	1 cut(s)	701
BstSCI	CCNGG	6 cut(s)	286, 626, 1358, 1441, 2645, 2782
BstSFI	CTRYAG	1 cut(s)	1794
BstUI	CGCG	1 cut(s)	2004
BstV1I	GCAGC	4 cut(s)	1749, 1780, 2267, 2602
BstV2I	GAAGAC	2 cut(s)	203, 2403
BstX2I	RGATCY	3 cut(s)	763, 1624, 1653
BstXI	CCANNNNNNTGG	1 cut(s)	713
BstYI	RGATCY	3 cut(s)	763, 1624, 1653
Bsu15I	ATCGAT	2 cut(s)	1203, 2481
BsuTUI	ATCGAT	2 cut(s)	1203, 2481
BtgI	CCRYGG	1 cut(s)	2247
BtsCI	GGATG	4 cut(s)	1298, 2317, 2476, 2609
BtsIMutI	CAGTG	3 cut(s)	280, 718, 1955
BveI	ACCTGC	1 cut(s)	846
Cac8I	GCNNGC	5 cut(s)	511, 1609, 2291, 2376, 2760
CciI	TCATGA	1 cut(s)	753
Cfr10I	RCCGGY	1 cut(s)	1001
Cfr13I	GGNCC	8 cut(s)	353, 472, 860, 1076, 1096, 1577, 1939, 2393
ClaI	ATCGAT	2 cut(s)	1203, 2481
CseI	GACGC	1 cut(s)	338
DpnI	GATC	8 cut(s)	224, 765, 885, 1626, 1655, 1778, 1926, 2055
DpnII	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
DraI	TTTAAA	1 cut(s)	243
DraIII	CACNNNGTG	1 cut(s)	1774
DriI	GACNNNNNGTC	2 cut(s)	207, 1665
EaeI	YGGCCR	2 cut(s)	507, 952
Eam1104I	CTCTTC	3 cut(s)	49, 1693, 1853
Eam1105I	GACNNNNNGTC	2 cut(s)	207, 1665
EarI	CTCTTC	3 cut(s)	49, 1693, 1853
EciI	GGCGGA	1 cut(s)	1998
Ecl136II	GAGCTC	2 cut(s)	370, 1198
Eco147I	AGGCCT	1 cut(s)	605
Eco24I	GRGCYC	3 cut(s)	42, 372, 1200
Eco31I	GGTCTC	1 cut(s)	966
Eco47I	GGWCC	2 cut(s)	1577, 2393
Eco53kI	GAGCTC	2 cut(s)	370, 1198
Eco57I	CTGAAG	2 cut(s)	836, 1153
Eco72I	CACGTG	1 cut(s)	2683
Eco88I	CYCGRG	2 cut(s)	218, 1014
Eco91I	GGTNACC	1 cut(s)	701
EcoICRI	GAGCTC	2 cut(s)	370, 1198
EcoO109I	RGGNCCY	1 cut(s)	1939
EcoO65I	GGTNACC	1 cut(s)	701
EcoRI	GAATTC	3 cut(s)	576, 1311, 1592
EcoRII	CCWGG	3 cut(s)	626, 2645, 2782
EcoT22I	ATGCAT	1 cut(s)	1028
EcoT38I	GRGCYC	3 cut(s)	42, 372, 1200
FaqI	GGGAC	4 cut(s)	1162, 1459, 2100, 2199
FauI	CCCGC	2 cut(s)	401, 1997
FbaI	TGATCA	1 cut(s)	1776
FblI	GTMKAC	1 cut(s)	2751
Fnu4HI	GCNGC	5 cut(s)	1245, 1738, 1794, 2256, 2616
FokI	GGATG	4 cut(s)	1285, 2324, 2483, 2596
FriOI	GRGCYC	3 cut(s)	42, 372, 1200
Fsp4HI	GCNGC	5 cut(s)	1245, 1738, 1794, 2256, 2616
FspBI	CTAG	9 cut(s)	26, 519, 1112, 1262, 1272, 1340, 1478, 1869, 2516
GluI	GCNGC	5 cut(s)	1245, 1738, 1794, 2256, 2616
GsaI	CCCAGC	1 cut(s)	1992
GsuI	CTGGAG	7 cut(s)	90, 711, 917, 1239, 1931, 2629, 2766
HgaI	GACGC	1 cut(s)	338
Hin1I	GRCGYC	1 cut(s)	330
HincII	GTYRAC	1 cut(s)	328
HindII	GTYRAC	1 cut(s)	328
HindIII	AAGCTT	1 cut(s)	457
HphI	GGTGA	4 cut(s)	172, 775, 1445, 2033
Hpy166II	GTNNAC	6 cut(s)	328, 783, 1388, 2488, 2641, 2752
Hpy8I	GTNNAC	6 cut(s)	328, 783, 1388, 2488, 2641, 2752
Hpy99I	CGWCG	2 cut(s)	551, 658
HpyAV	CCTTC	6 cut(s)	595, 839, 957, 1691, 1952, 2784
HpyCH4III	ACNGT	9 cut(s)	86, 482, 572, 2021, 2043, 2118, 2193, 2453, 2631
HpyCH4IV	ACGT	5 cut(s)	111, 546, 1046, 1472, 2682
HpyF10VI	GCNNNNNNNGC	5 cut(s)	515, 1231, 1810, 2252, 2360
HpySE526I	ACGT	5 cut(s)	111, 546, 1046, 1472, 2682
Hsp92I	GRCGYC	1 cut(s)	330
Kpn2I	TCCGGA	2 cut(s)	1084, 1317
KpnI	GGTACC	1 cut(s)	2427
Ksp22I	TGATCA	1 cut(s)	1776
Kzo9I	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
LmnI	GCTCC	3 cut(s)	37, 1985, 2785
Lsp1109I	GCAGC	4 cut(s)	1749, 1780, 2267, 2602
LweI	GCATC	1 cut(s)	2627
MaeI	CTAG	9 cut(s)	26, 519, 1112, 1262, 1272, 1340, 1478, 1869, 2516
MaeII	ACGT	5 cut(s)	111, 546, 1046, 1472, 2682
MaeIII	GTNAC	9 cut(s)	80, 295, 482, 632, 701, 982, 2432, 2453, 2518
MalI	GATC	8 cut(s)	224, 765, 885, 1626, 1655, 1778, 1926, 2055
MboI	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
MfeI	CAATTG	2 cut(s)	1539, 2634
MflI	RGATCY	3 cut(s)	763, 1624, 1653
MhlI	GDGCHC	4 cut(s)	42, 372, 1200, 2682
MlyI	GAGTC	4 cut(s)	217, 652, 2333, 2636
MmeI	TCCRAC	3 cut(s)	285, 666, 677
Mph1103I	ATGCAT	1 cut(s)	1028
MroI	TCCGGA	2 cut(s)	1084, 1317
MroXI	GAANNNNTTC	3 cut(s)	416, 1067, 1352
MseI	TTAA	6 cut(s)	108, 242, 774, 1040, 1551, 2076
MslI	CAYNNNNRTG	3 cut(s)	711, 2022, 2310
MspA1I	CMGCKG	1 cut(s)	2615
MspR9I	CCNGG	6 cut(s)	288, 628, 1360, 1443, 2647, 2784
MunI	CAATTG	2 cut(s)	1539, 2634
Mva1269I	GAATGC	1 cut(s)	1540
MvaI	CCWGG	3 cut(s)	628, 2647, 2784
MvnI	CGCG	1 cut(s)	2004
MwoI	GCNNNNNNNGC	5 cut(s)	515, 1231, 1810, 2252, 2360
NciI	CCSGG	3 cut(s)	288, 1360, 1443
NdeII	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
NlaIV	GGNNCC	4 cut(s)	39, 862, 1655, 2425
NmeAIII	GCCGAG	1 cut(s)	1746
NmuCI	GTSAC	3 cut(s)	80, 295, 2453
NsiI	ATGCAT	1 cut(s)	1028
NspI	RCATGY	2 cut(s)	2131, 2410
PaeR7I	CTCGAG	1 cut(s)	218
PagI	TCATGA	1 cut(s)	753
PceI	AGGCCT	1 cut(s)	605
PciI	ACATGT	1 cut(s)	2127
PctI	GAATGC	1 cut(s)	1540
PdmI	GAANNNNTTC	3 cut(s)	416, 1067, 1352
PflMI	CCANNNNNTGG	1 cut(s)	2669
PfoI	TCCNGGA	1 cut(s)	286
PkrI	GCNGC	5 cut(s)	1246, 1739, 1795, 2257, 2617
PleI	GAGTC	4 cut(s)	216, 652, 2333, 2636
PmaCI	CACGTG	1 cut(s)	2683
PmlI	CACGTG	1 cut(s)	2683
PpsI	GAGTC	4 cut(s)	216, 652, 2333, 2636
Ppu21I	YACGTR	1 cut(s)	2683
PscI	ACATGT	1 cut(s)	2127
Psp124BI	GAGCTC	2 cut(s)	372, 1200
Psp6I	CCWGG	3 cut(s)	626, 2645, 2782
PspCI	CACGTG	1 cut(s)	2683
PspEI	GGTNACC	1 cut(s)	701
PspFI	CCCAGC	1 cut(s)	1988
PspGI	CCWGG	3 cut(s)	626, 2645, 2782
PspN4I	GGNNCC	4 cut(s)	39, 862, 1655, 2425
PspPI	GGNCC	8 cut(s)	353, 472, 860, 1076, 1096, 1577, 1939, 2393
PsrI	GAACNNNNNNTAC	2 cut(s)	839, 871
PstI	CTGCAG	1 cut(s)	1798
PsuI	RGATCY	3 cut(s)	763, 1624, 1653
RseI	CAYNNNNRTG	3 cut(s)	711, 2022, 2310
SacI	GAGCTC	2 cut(s)	372, 1200
SaqAI	TTAA	6 cut(s)	108, 242, 774, 1040, 1551, 2076
SatI	GCNGC	5 cut(s)	1245, 1738, 1794, 2256, 2616
Sau3AI	GATC	8 cut(s)	222, 763, 883, 1624, 1653, 1776, 1924, 2053
Sau96I	GGNCC	8 cut(s)	353, 472, 860, 1076, 1096, 1577, 1939, 2393
SchI	GAGTC	4 cut(s)	217, 652, 2333, 2636
ScrFI	CCNGG	6 cut(s)	288, 628, 1360, 1443, 2647, 2784
SduI	GDGCHC	4 cut(s)	42, 372, 1200, 2682
SfaNI	GCATC	1 cut(s)	2627
SfcI	CTRYAG	1 cut(s)	1794
Sfr274I	CTCGAG	1 cut(s)	218
SinI	GGWCC	2 cut(s)	1577, 2393
SlaI	CTCGAG	1 cut(s)	218
SmiMI	CAYNNNNRTG	3 cut(s)	711, 2022, 2310
SmlI	CTYRAG	4 cut(s)	218, 317, 533, 1558
SmoI	CTYRAG	4 cut(s)	218, 317, 533, 1558
SpeI	ACTAGT	1 cut(s)	2515
SseBI	AGGCCT	1 cut(s)	605
SsiI	CCGC	5 cut(s)	408, 1244, 1983, 2004, 2613
SspI	AATATT	1 cut(s)	467
SspMI	CTAG	9 cut(s)	26, 519, 1112, 1262, 1272, 1340, 1478, 1869, 2516
SstI	GAGCTC	2 cut(s)	372, 1200
StuI	AGGCCT	1 cut(s)	605
StyD4I	CCNGG	6 cut(s)	286, 626, 1358, 1441, 2645, 2782
TaaI	ACNGT	9 cut(s)	86, 482, 572, 2021, 2043, 2118, 2193, 2453, 2631
TaiI	ACGT	5 cut(s)	114, 549, 1049, 1475, 2685
TaqII	GACCGA	1 cut(s)	2410
TatI	WGTACW	4 cut(s)	1837, 2163, 2487, 2626
TauI	GCSGC	1 cut(s)	1247
Tru1I	TTAA	6 cut(s)	108, 242, 774, 1040, 1551, 2076
Tru9I	TTAA	6 cut(s)	108, 242, 774, 1040, 1551, 2076
TscAI	CASTG	3 cut(s)	280, 718, 1955
TseFI	GTSAC	3 cut(s)	80, 295, 2453
TseI	GCWGC	4 cut(s)	1737, 1793, 2255, 2615
Tsp45I	GTSAC	3 cut(s)	80, 295, 2453
TspDTI	ATGAA	6 cut(s)	66, 865, 1145, 1361, 1633, 2477
TspGWI	ACGGA	1 cut(s)	1218
TspRI	CASTG	3 cut(s)	280, 718, 1955
Van91I	CCANNNNNTGG	1 cut(s)	2669
VpaK11BI	GGWCC	2 cut(s)	1577, 2393
XceI	RCATGY	2 cut(s)	2131, 2410
XhoI	CTCGAG	1 cut(s)	218
XmiI	GTMKAC	1 cut(s)	2751
XmnI	GAANNNNTTC	3 cut(s)	416, 1067, 1352
XspI	CTAG	9 cut(s)	26, 519, 1112, 1262, 1272, 1340, 1478, 1869, 2516
Zsp2I	ATGCAT	1 cut(s)	1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.